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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
CPBIPEFG_00001	4.3e-49	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
CPBIPEFG_00002	7.02e-40	-	-	-	-	-	-	-	-
CPBIPEFG_00003	8.86e-09	-	-	-	-	-	-	-	-
CPBIPEFG_00005	1.63e-112	-	-	-	-	-	-	-	-
CPBIPEFG_00006	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CPBIPEFG_00007	2.25e-51	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
CPBIPEFG_00008	5.91e-151	-	-	-	L	-	-	-	Resolvase, N terminal domain
CPBIPEFG_00009	0.0	-	-	-	L	-	-	-	Putative transposase DNA-binding domain
CPBIPEFG_00010	2.43e-56	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
CPBIPEFG_00011	2.52e-166	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
CPBIPEFG_00012	6.1e-213	metF	1.5.1.20	-	C	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
CPBIPEFG_00013	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CPBIPEFG_00014	2.49e-114	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CPBIPEFG_00015	2.57e-25	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CPBIPEFG_00016	1.62e-62	-	-	-	-	-	-	-	-
CPBIPEFG_00017	4.46e-275	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
CPBIPEFG_00018	1.27e-273	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
CPBIPEFG_00019	5.86e-275	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
CPBIPEFG_00020	1.4e-108	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
CPBIPEFG_00021	5.26e-63	-	-	-	K	-	-	-	Helix-turn-helix
CPBIPEFG_00022	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
CPBIPEFG_00023	6.39e-90	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CPBIPEFG_00024	7.9e-287	oxlT	-	-	P	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
CPBIPEFG_00025	3.86e-108	-	-	-	-	-	-	-	-
CPBIPEFG_00026	4.75e-167	-	-	-	-	-	-	-	-
CPBIPEFG_00027	6.8e-39	-	-	-	-	-	-	-	-
CPBIPEFG_00028	1.06e-136	-	2.1.1.72	-	L	ko:K06223	ko03430,map03430	ko00000,ko00001,ko01000,ko02048,ko03032,ko03400	DNA methyltransferase
CPBIPEFG_00032	2.41e-27	-	-	-	-	-	-	-	-
CPBIPEFG_00033	1.33e-30	-	-	-	S	-	-	-	Domain of unknown function (DUF4393)
CPBIPEFG_00034	9.81e-225	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CPBIPEFG_00035	2.91e-99	M1-431	-	-	S	-	-	-	Protein of unknown function (DUF1706)
CPBIPEFG_00036	3.55e-149	-	-	-	-	-	-	-	-
CPBIPEFG_00037	2.08e-11	-	-	-	-	-	-	-	-
CPBIPEFG_00038	2.93e-71	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
CPBIPEFG_00039	4.45e-83	-	-	-	-	-	-	-	-
CPBIPEFG_00040	3.74e-154	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
CPBIPEFG_00041	1.51e-185	-	-	-	F	-	-	-	Phosphorylase superfamily
CPBIPEFG_00042	6.15e-68	codA	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
CPBIPEFG_00043	6.32e-184	-	-	-	L	ko:K07496	-	ko00000	Transposase
CPBIPEFG_00044	3.04e-180	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
CPBIPEFG_00045	4.2e-301	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
CPBIPEFG_00046	5.44e-116	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CPBIPEFG_00047	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
CPBIPEFG_00048	2.3e-275	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
CPBIPEFG_00049	7.25e-265	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
CPBIPEFG_00050	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
CPBIPEFG_00051	3.97e-40	-	-	-	-	-	-	-	-
CPBIPEFG_00052	6.54e-117	-	-	-	-	-	-	-	-
CPBIPEFG_00053	2.62e-166	-	-	-	F	-	-	-	glutamine amidotransferase
CPBIPEFG_00054	1.23e-189	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CPBIPEFG_00055	1.25e-104	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
CPBIPEFG_00056	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_00057	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
CPBIPEFG_00058	1.41e-128	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
CPBIPEFG_00059	7.47e-229	-	-	-	EGP	-	-	-	Major facilitator superfamily
CPBIPEFG_00060	1.19e-145	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
CPBIPEFG_00061	5.33e-288	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CPBIPEFG_00062	1.09e-170	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_00063	9.06e-192	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CPBIPEFG_00064	3.14e-140	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CPBIPEFG_00065	4.08e-138	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CPBIPEFG_00066	2.71e-192	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
CPBIPEFG_00067	1.17e-146	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_00068	1.37e-306	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CPBIPEFG_00069	5.13e-209	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
CPBIPEFG_00071	4.52e-210	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPBIPEFG_00072	3.83e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CPBIPEFG_00073	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CPBIPEFG_00074	2.03e-222	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
CPBIPEFG_00075	7.43e-171	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
CPBIPEFG_00076	5.69e-195	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
CPBIPEFG_00077	3.41e-80	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
CPBIPEFG_00078	1.49e-157	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
CPBIPEFG_00079	2.37e-271	-	-	-	-	-	-	-	-
CPBIPEFG_00082	2.88e-119	-	-	-	-	-	-	-	-
CPBIPEFG_00084	1.26e-154	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
CPBIPEFG_00085	5.5e-303	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CPBIPEFG_00086	5.32e-35	-	-	-	S	-	-	-	Transglycosylase associated protein
CPBIPEFG_00087	1.9e-15	-	-	-	S	-	-	-	CsbD-like
CPBIPEFG_00088	1.22e-37	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CPBIPEFG_00089	2.93e-199	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CPBIPEFG_00090	3.29e-132	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CPBIPEFG_00091	6.43e-82	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
CPBIPEFG_00092	1.77e-09	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
CPBIPEFG_00093	2.28e-149	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
CPBIPEFG_00094	6.32e-264	-	-	-	EGP	-	-	-	Major facilitator Superfamily
CPBIPEFG_00095	1.9e-11	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
CPBIPEFG_00096	5.71e-262	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
CPBIPEFG_00097	1.52e-205	-	-	-	S	-	-	-	EDD domain protein, DegV family
CPBIPEFG_00098	2.32e-85	-	-	-	-	-	-	-	-
CPBIPEFG_00099	1.76e-109	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
CPBIPEFG_00100	2.76e-115	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CPBIPEFG_00101	3.06e-85	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CPBIPEFG_00102	1.27e-99	-	-	-	K	-	-	-	LytTr DNA-binding domain
CPBIPEFG_00103	1.42e-57	-	-	-	-	-	-	-	-
CPBIPEFG_00105	5.3e-184	mrr2	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
CPBIPEFG_00107	3.83e-277	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_00108	1.6e-170	-	-	-	-	-	-	-	-
CPBIPEFG_00109	4.51e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CPBIPEFG_00110	2.01e-141	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CPBIPEFG_00111	3.39e-116	-	-	-	-	-	-	-	-
CPBIPEFG_00112	2.03e-100	-	-	-	-	-	-	-	-
CPBIPEFG_00113	8.44e-24	-	-	-	S	-	-	-	Toxin ToxN, type III toxin-antitoxin system
CPBIPEFG_00114	5.83e-161	frlR1	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
CPBIPEFG_00115	3.83e-230	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CPBIPEFG_00116	1.09e-161	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CPBIPEFG_00117	4.95e-246	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CPBIPEFG_00118	6.27e-131	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
CPBIPEFG_00119	1.33e-170	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
CPBIPEFG_00120	1.51e-111	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CPBIPEFG_00121	6.78e-164	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
CPBIPEFG_00122	7.51e-198	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CPBIPEFG_00123	2.32e-79	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
CPBIPEFG_00124	1.9e-195	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CPBIPEFG_00125	6.21e-68	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
CPBIPEFG_00126	8.08e-147	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CPBIPEFG_00127	1.13e-44	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
CPBIPEFG_00128	5.33e-141	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CPBIPEFG_00129	3.64e-58	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CPBIPEFG_00130	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CPBIPEFG_00131	1.53e-118	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CPBIPEFG_00132	1.02e-143	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
CPBIPEFG_00133	1.36e-121	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
CPBIPEFG_00134	2.3e-36	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
CPBIPEFG_00135	2.28e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CPBIPEFG_00136	6.16e-110	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CPBIPEFG_00137	4.39e-151	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
CPBIPEFG_00138	2.66e-29	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
CPBIPEFG_00139	5.28e-33	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
CPBIPEFG_00140	1.43e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
CPBIPEFG_00141	3.28e-179	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CPBIPEFG_00142	1.38e-182	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CPBIPEFG_00143	1.82e-198	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
CPBIPEFG_00144	1.65e-219	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
CPBIPEFG_00145	1.1e-200	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
CPBIPEFG_00146	3.02e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CPBIPEFG_00147	3.82e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CPBIPEFG_00148	5e-130	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
CPBIPEFG_00149	8.53e-34	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CPBIPEFG_00150	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CPBIPEFG_00151	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
CPBIPEFG_00152	2.41e-45	-	-	-	-	-	-	-	-
CPBIPEFG_00153	4.1e-118	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
CPBIPEFG_00154	1.76e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CPBIPEFG_00155	7.88e-97	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CPBIPEFG_00156	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CPBIPEFG_00157	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CPBIPEFG_00158	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CPBIPEFG_00159	1.56e-132	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
CPBIPEFG_00160	5.04e-71	-	-	-	-	-	-	-	-
CPBIPEFG_00162	1.83e-40	yebC	-	-	M	-	-	-	Membrane
CPBIPEFG_00163	9.54e-208	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CPBIPEFG_00164	6.31e-65	-	-	-	V	-	-	-	Beta-lactamase
CPBIPEFG_00165	7.69e-44	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CPBIPEFG_00166	5.6e-19	-	-	GT2	S	ko:K12990	ko02024,ko02025,map02024,map02025	ko00000,ko00001,ko01000,ko01003,ko01005	Glycosyl transferase family 2
CPBIPEFG_00167	1.38e-20	-	-	-	M	-	-	-	Domain of unknown function (DUF4422)
CPBIPEFG_00168	4.09e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CPBIPEFG_00169	1.52e-43	-	-	-	-	-	-	-	-
CPBIPEFG_00170	7.69e-87	-	-	-	-	-	-	-	-
CPBIPEFG_00171	3.85e-200	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
CPBIPEFG_00172	8.32e-221	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CPBIPEFG_00173	7.59e-178	yxeH	-	-	S	-	-	-	hydrolase
CPBIPEFG_00174	1.66e-15	-	-	-	S	-	-	-	Enterocin A Immunity
CPBIPEFG_00175	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
CPBIPEFG_00176	7.67e-234	-	-	-	P	ko:K06901	-	ko00000,ko02000	secondary active sulfate transmembrane transporter activity
CPBIPEFG_00177	2.19e-124	-	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Phosphoribosyl transferase domain
CPBIPEFG_00178	1.44e-52	-	-	-	K	-	-	-	LysR substrate binding domain
CPBIPEFG_00179	7.53e-128	-	-	-	K	-	-	-	LysR substrate binding domain
CPBIPEFG_00180	1.09e-141	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
CPBIPEFG_00181	1.95e-07	-	-	-	E	-	-	-	Preprotein translocase subunit SecB
CPBIPEFG_00184	1.16e-95	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CPBIPEFG_00204	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CPBIPEFG_00205	1.56e-190	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CPBIPEFG_00206	7.39e-226	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CPBIPEFG_00207	3.41e-231	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CPBIPEFG_00208	8.15e-235	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CPBIPEFG_00209	8.89e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CPBIPEFG_00210	4.31e-232	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CPBIPEFG_00211	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CPBIPEFG_00212	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
CPBIPEFG_00213	1.67e-74	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CPBIPEFG_00214	3.82e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
CPBIPEFG_00215	1.98e-64	-	-	-	-	-	-	-	-
CPBIPEFG_00216	1.06e-159	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
CPBIPEFG_00217	1.63e-148	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
CPBIPEFG_00218	9.22e-213	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CPBIPEFG_00219	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
CPBIPEFG_00220	9.08e-187	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
CPBIPEFG_00221	2.87e-311	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CPBIPEFG_00222	1.6e-220	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CPBIPEFG_00223	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CPBIPEFG_00224	5.6e-45	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CPBIPEFG_00225	1.64e-142	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
CPBIPEFG_00226	2.46e-102	-	-	-	S	-	-	-	ASCH
CPBIPEFG_00227	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
CPBIPEFG_00228	4.01e-194	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
CPBIPEFG_00229	2.06e-201	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CPBIPEFG_00230	6.25e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CPBIPEFG_00231	5.59e-251	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CPBIPEFG_00232	5.03e-194	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CPBIPEFG_00233	5.2e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CPBIPEFG_00234	9.01e-89	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
CPBIPEFG_00235	1.73e-132	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CPBIPEFG_00236	1.64e-261	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CPBIPEFG_00237	5.95e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
CPBIPEFG_00238	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
CPBIPEFG_00239	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
CPBIPEFG_00240	1.49e-252	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
CPBIPEFG_00241	3.27e-69	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
CPBIPEFG_00242	4.63e-184	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
CPBIPEFG_00243	3e-308	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
CPBIPEFG_00244	9.53e-23	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
CPBIPEFG_00245	3.95e-41	-	-	-	S	-	-	-	HicB family
CPBIPEFG_00246	1.61e-36	-	-	-	-	-	-	-	-
CPBIPEFG_00247	1.76e-102	-	-	-	-	-	-	-	-
CPBIPEFG_00249	1.31e-67	-	-	-	S	-	-	-	Bacterial toxin of type II toxin-antitoxin system, YafQ
CPBIPEFG_00250	2.73e-60	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
CPBIPEFG_00251	1.13e-182	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CPBIPEFG_00252	2.87e-141	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CPBIPEFG_00253	1.7e-314	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
CPBIPEFG_00254	4.82e-55	XK27_08630	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
CPBIPEFG_00255	1.6e-287	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CPBIPEFG_00256	4.67e-163	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CPBIPEFG_00257	2.23e-150	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CPBIPEFG_00258	3.15e-99	-	-	-	-	-	-	-	-
CPBIPEFG_00259	4.26e-128	-	-	-	-	-	-	-	-
CPBIPEFG_00260	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CPBIPEFG_00261	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CPBIPEFG_00262	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CPBIPEFG_00263	7.84e-106	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
CPBIPEFG_00267	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
CPBIPEFG_00268	9.65e-249	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CPBIPEFG_00269	5.97e-209	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CPBIPEFG_00270	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CPBIPEFG_00271	2.32e-305	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CPBIPEFG_00272	3.8e-80	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
CPBIPEFG_00273	6.18e-77	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
CPBIPEFG_00274	1.26e-46	yabO	-	-	J	-	-	-	S4 domain protein
CPBIPEFG_00275	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CPBIPEFG_00276	1.89e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CPBIPEFG_00277	3.42e-233	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CPBIPEFG_00278	8.34e-165	-	-	-	S	-	-	-	(CBS) domain
CPBIPEFG_00279	1.04e-119	-	-	-	K	-	-	-	transcriptional regulator
CPBIPEFG_00280	6.31e-274	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CPBIPEFG_00281	1.33e-79	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CPBIPEFG_00282	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
CPBIPEFG_00283	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CPBIPEFG_00284	5.28e-53	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
CPBIPEFG_00285	4.49e-194	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CPBIPEFG_00286	0.0	-	-	-	E	-	-	-	amino acid
CPBIPEFG_00288	6.16e-243	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_00289	7.82e-69	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
CPBIPEFG_00290	1.96e-23	-	-	-	-	-	-	-	-
CPBIPEFG_00291	3.06e-74	-	-	-	-	-	-	-	-
CPBIPEFG_00293	1.55e-123	rbsB	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein domain
CPBIPEFG_00294	3.84e-70	-	-	-	-	-	-	-	-
CPBIPEFG_00295	1.78e-104	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CPBIPEFG_00296	1e-106	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
CPBIPEFG_00297	6.31e-29	-	-	-	-	-	-	-	-
CPBIPEFG_00298	1.51e-57	-	-	-	-	-	-	-	-
CPBIPEFG_00299	4.71e-32	-	-	-	-	-	-	-	-
CPBIPEFG_00300	3.3e-171	-	-	-	S	-	-	-	Peptidase_C39 like family
CPBIPEFG_00301	1.65e-205	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CPBIPEFG_00302	3.8e-130	-	-	-	G	-	-	-	Aldose 1-epimerase
CPBIPEFG_00303	8.94e-252	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CPBIPEFG_00304	2.52e-142	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CPBIPEFG_00305	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
CPBIPEFG_00306	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
CPBIPEFG_00307	1.04e-308	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CPBIPEFG_00308	6.27e-24	-	-	-	-	-	-	-	-
CPBIPEFG_00309	3.32e-37	-	-	-	-	-	-	-	-
CPBIPEFG_00311	0.0	pepC1	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CPBIPEFG_00312	7.92e-151	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CPBIPEFG_00313	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CPBIPEFG_00314	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CPBIPEFG_00315	1.21e-264	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CPBIPEFG_00316	6.08e-188	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CPBIPEFG_00317	1.07e-237	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CPBIPEFG_00318	3.02e-253	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CPBIPEFG_00319	5.37e-221	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CPBIPEFG_00320	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CPBIPEFG_00321	2.05e-94	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
CPBIPEFG_00322	9.44e-99	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CPBIPEFG_00323	6.33e-148	-	-	-	-	-	-	-	-
CPBIPEFG_00325	6.01e-147	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
CPBIPEFG_00326	3.34e-244	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CPBIPEFG_00327	5.22e-117	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
CPBIPEFG_00328	4.56e-138	-	-	-	S	ko:K06872	-	ko00000	TPM domain
CPBIPEFG_00329	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CPBIPEFG_00330	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CPBIPEFG_00331	5.48e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
CPBIPEFG_00332	8.57e-128	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CPBIPEFG_00333	9.89e-207	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CPBIPEFG_00334	8.38e-109	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CPBIPEFG_00336	4.54e-59	-	-	-	-	-	-	-	-
CPBIPEFG_00337	4.84e-11	-	-	-	-	-	-	-	-
CPBIPEFG_00338	2.66e-57	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
CPBIPEFG_00339	0.0	-	-	-	-	-	-	-	-
CPBIPEFG_00340	0.0	-	-	-	S	-	-	-	PglZ domain
CPBIPEFG_00342	2.36e-68	-	-	-	LO	-	-	-	Belongs to the peptidase S16 family
CPBIPEFG_00343	0.0	-	-	-	V	-	-	-	Eco57I restriction-modification methylase
CPBIPEFG_00344	4.02e-255	-	-	-	K	-	-	-	RNA-binding protein homologous to eukaryotic snRNP
CPBIPEFG_00345	8.2e-145	-	-	-	S	-	-	-	Domain of unknown function (DUF1788)
CPBIPEFG_00346	7.8e-135	-	-	-	S	-	-	-	Putative inner membrane protein (DUF1819)
CPBIPEFG_00347	3.41e-294	-	-	-	S	-	-	-	Protein of unknown function DUF262
CPBIPEFG_00348	1.56e-39	-	-	-	-	-	-	-	-
CPBIPEFG_00349	1.55e-16	-	-	-	-	-	-	-	-
CPBIPEFG_00350	3.78e-64	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CPBIPEFG_00351	4.41e-78	-	-	-	L	-	-	-	Helix-turn-helix domain
CPBIPEFG_00352	7.24e-205	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CPBIPEFG_00353	1.39e-173	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_00354	2.95e-139	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
CPBIPEFG_00355	1.27e-142	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
CPBIPEFG_00356	9.41e-32	adhR	-	-	K	ko:K21745	-	ko00000,ko03000	helix_turn_helix, mercury resistance
CPBIPEFG_00357	5.72e-12	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2255)
CPBIPEFG_00358	3.88e-140	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
CPBIPEFG_00359	1.48e-127	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
CPBIPEFG_00360	1.11e-87	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
CPBIPEFG_00362	2.02e-80	-	-	-	S	-	-	-	Abi-like protein
CPBIPEFG_00363	3.63e-80	kptA	-	-	H	ko:K07559	-	ko00000,ko01000,ko03016	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
CPBIPEFG_00364	4.58e-87	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
CPBIPEFG_00365	7.55e-44	-	-	-	-	-	-	-	-
CPBIPEFG_00366	1.22e-289	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
CPBIPEFG_00367	1.12e-188	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
CPBIPEFG_00368	8.01e-68	-	-	-	-	-	-	-	-
CPBIPEFG_00369	1.44e-31	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
CPBIPEFG_00370	1.37e-152	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
CPBIPEFG_00371	1.48e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CPBIPEFG_00372	3.86e-27	-	-	-	K	-	-	-	DNA-binding transcription factor activity
CPBIPEFG_00373	8.85e-94	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
CPBIPEFG_00374	3.43e-59	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
CPBIPEFG_00375	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
CPBIPEFG_00376	3.55e-39	-	-	-	-	-	-	-	-
CPBIPEFG_00377	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
CPBIPEFG_00378	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CPBIPEFG_00379	4.42e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CPBIPEFG_00380	2.5e-176	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
CPBIPEFG_00381	1.08e-203	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
CPBIPEFG_00382	5.3e-144	yjbH	-	-	Q	-	-	-	Thioredoxin
CPBIPEFG_00383	6.91e-139	-	-	-	S	-	-	-	CYTH
CPBIPEFG_00384	1.63e-145	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
CPBIPEFG_00385	2.52e-197	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CPBIPEFG_00386	6.77e-216	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CPBIPEFG_00387	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CPBIPEFG_00388	2.05e-88	-	-	-	S	-	-	-	SNARE associated Golgi protein
CPBIPEFG_00389	4.12e-255	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
CPBIPEFG_00390	0.0	pacL	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
CPBIPEFG_00391	2.72e-85	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
CPBIPEFG_00392	1.16e-267	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
CPBIPEFG_00393	2.12e-136	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CPBIPEFG_00394	4.46e-90	WQ51_03320	-	-	S	-	-	-	Protein of unknown function (DUF1149)
CPBIPEFG_00395	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
CPBIPEFG_00396	4.05e-289	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
CPBIPEFG_00397	1.85e-301	ymfH	-	-	S	-	-	-	Peptidase M16
CPBIPEFG_00398	1.89e-169	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
CPBIPEFG_00399	1.33e-186	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
CPBIPEFG_00400	3e-127	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CPBIPEFG_00401	8.51e-246	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CPBIPEFG_00402	5.81e-284	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
CPBIPEFG_00403	5.26e-54	-	-	-	L	-	-	-	Probable transposase
CPBIPEFG_00404	1.17e-29	repA	-	-	S	-	-	-	Replication initiator protein A
CPBIPEFG_00405	1.01e-161	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
CPBIPEFG_00406	4.18e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
CPBIPEFG_00407	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
CPBIPEFG_00408	1.83e-264	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CPBIPEFG_00410	7.13e-227	lipA	-	-	I	-	-	-	Carboxylesterase family
CPBIPEFG_00411	1.55e-87	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
CPBIPEFG_00412	7.87e-37	-	-	-	-	-	-	-	-
CPBIPEFG_00413	1.54e-74	-	-	-	S	-	-	-	Bacterial PH domain
CPBIPEFG_00414	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
CPBIPEFG_00415	2.21e-100	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
CPBIPEFG_00416	1.06e-62	-	-	-	-	-	-	-	-
CPBIPEFG_00417	1.78e-175	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
CPBIPEFG_00419	1.29e-53	-	-	-	-	-	-	-	-
CPBIPEFG_00420	8.27e-09	-	-	-	-	-	-	-	-
CPBIPEFG_00421	3.46e-07	-	-	-	M	-	-	-	Mycoplasma protein of unknown function, DUF285
CPBIPEFG_00422	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CPBIPEFG_00423	1.3e-263	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CPBIPEFG_00424	1.93e-302	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CPBIPEFG_00425	1.56e-231	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
CPBIPEFG_00426	1.38e-120	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CPBIPEFG_00427	5.1e-211	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CPBIPEFG_00428	2.78e-158	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
CPBIPEFG_00429	2.51e-143	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CPBIPEFG_00430	2.95e-236	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CPBIPEFG_00431	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CPBIPEFG_00432	5.43e-296	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CPBIPEFG_00434	2.07e-56	-	-	-	O	-	-	-	Matrixin
CPBIPEFG_00436	1.52e-238	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CPBIPEFG_00437	2.99e-180	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
CPBIPEFG_00438	3.37e-220	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
CPBIPEFG_00439	9.25e-82	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
CPBIPEFG_00440	2.36e-93	-	-	-	K	-	-	-	Transcriptional regulator
CPBIPEFG_00441	4.68e-110	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CPBIPEFG_00442	1.11e-299	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CPBIPEFG_00443	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
CPBIPEFG_00444	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CPBIPEFG_00445	1.48e-21	-	-	-	-	-	-	-	-
CPBIPEFG_00446	3.29e-127	-	-	-	E	-	-	-	amino acid
CPBIPEFG_00447	3.3e-55	-	-	-	-	-	-	-	-
CPBIPEFG_00448	1e-113	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CPBIPEFG_00449	1.01e-102	-	-	-	S	-	-	-	LPXTG cell wall anchor motif
CPBIPEFG_00450	5.06e-280	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CPBIPEFG_00451	1.75e-137	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
CPBIPEFG_00452	1.85e-48	-	-	-	-	-	-	-	-
CPBIPEFG_00453	1.77e-93	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
CPBIPEFG_00454	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
CPBIPEFG_00455	0.0	-	-	-	S	-	-	-	TerB-C domain
CPBIPEFG_00456	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
CPBIPEFG_00457	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
CPBIPEFG_00458	4.75e-80	-	-	-	-	-	-	-	-
CPBIPEFG_00459	6.62e-178	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2263)
CPBIPEFG_00460	4.49e-50	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CPBIPEFG_00463	1.18e-165	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
CPBIPEFG_00464	6.72e-289	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CPBIPEFG_00465	3.56e-35	-	-	-	L	-	-	-	Probable transposase
CPBIPEFG_00468	1.17e-56	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CPBIPEFG_00469	1.87e-290	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
CPBIPEFG_00470	7.21e-205	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CPBIPEFG_00471	1.26e-287	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
CPBIPEFG_00472	5.77e-149	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
CPBIPEFG_00473	1.37e-189	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CPBIPEFG_00474	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
CPBIPEFG_00475	0.0	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CPBIPEFG_00476	1.11e-202	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CPBIPEFG_00477	1.09e-172	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CPBIPEFG_00478	3.85e-198	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
CPBIPEFG_00479	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CPBIPEFG_00480	1.14e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CPBIPEFG_00481	3.76e-215	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
CPBIPEFG_00482	1.15e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CPBIPEFG_00483	1.49e-309	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CPBIPEFG_00484	2.12e-224	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
CPBIPEFG_00485	5e-32	-	-	-	-	-	-	-	-
CPBIPEFG_00486	1.35e-39	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
CPBIPEFG_00487	1.41e-28	-	-	-	L	-	-	-	Transposase and inactivated derivatives
CPBIPEFG_00488	6.6e-28	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
CPBIPEFG_00489	3.16e-36	-	-	-	L	-	-	-	Transposase and inactivated derivatives
CPBIPEFG_00490	2.43e-75	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
CPBIPEFG_00491	1.06e-194	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
CPBIPEFG_00492	4.86e-84	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CPBIPEFG_00493	2.08e-84	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CPBIPEFG_00494	4.62e-37	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
CPBIPEFG_00495	1.42e-60	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
CPBIPEFG_00496	0.0	-	-	-	E	-	-	-	Amino acid permease
CPBIPEFG_00497	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
CPBIPEFG_00498	6.31e-314	ynbB	-	-	P	-	-	-	aluminum resistance
CPBIPEFG_00499	8.62e-75	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
CPBIPEFG_00500	1.43e-47	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
CPBIPEFG_00501	1.59e-86	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
CPBIPEFG_00502	1.18e-51	-	-	-	K	-	-	-	Helix-turn-helix domain
CPBIPEFG_00503	9.25e-217	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CPBIPEFG_00504	2.74e-89	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CPBIPEFG_00505	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CPBIPEFG_00506	1.06e-256	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CPBIPEFG_00507	1.4e-80	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
CPBIPEFG_00508	3.67e-178	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CPBIPEFG_00509	9.28e-58	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
CPBIPEFG_00510	1.17e-202	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CPBIPEFG_00511	9.66e-110	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
CPBIPEFG_00512	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CPBIPEFG_00513	3.37e-161	csrR	-	-	K	-	-	-	response regulator
CPBIPEFG_00514	8.27e-124	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
CPBIPEFG_00515	2.57e-272	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
CPBIPEFG_00516	3.58e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CPBIPEFG_00517	1.12e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
CPBIPEFG_00518	2.14e-154	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CPBIPEFG_00519	4.77e-270	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
CPBIPEFG_00520	1.51e-121	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
CPBIPEFG_00521	1.23e-75	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CPBIPEFG_00522	4.77e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
CPBIPEFG_00523	2.8e-72	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CPBIPEFG_00524	1.79e-242	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
CPBIPEFG_00525	3.29e-52	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
CPBIPEFG_00526	4.33e-244	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
CPBIPEFG_00527	3.9e-79	-	-	-	S	ko:K09707	-	ko00000	ACT domain
CPBIPEFG_00528	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CPBIPEFG_00529	1.79e-213	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
CPBIPEFG_00530	1.24e-314	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
CPBIPEFG_00531	5.46e-108	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CPBIPEFG_00532	5.94e-134	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CPBIPEFG_00533	8.79e-201	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
CPBIPEFG_00534	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CPBIPEFG_00535	2.56e-19	-	-	-	-	-	-	-	-
CPBIPEFG_00536	2.86e-39	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CPBIPEFG_00537	5.83e-251	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CPBIPEFG_00538	5.94e-161	cas4	3.1.12.1	-	L	ko:K07464	-	ko00000,ko01000,ko02048	Domain of unknown function DUF83
CPBIPEFG_00539	5.5e-203	csd2	-	-	L	ko:K19115,ko:K19118	-	ko00000,ko02048	CRISPR-associated protein Cas7
CPBIPEFG_00540	0.0	csd1	-	-	M	ko:K19117	-	ko00000,ko02048	CRISPR-associated protein (Cas_Csd1)
CPBIPEFG_00541	1.11e-184	cas5	-	-	S	ko:K19119	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas5)
CPBIPEFG_00542	0.0	-	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
CPBIPEFG_00543	1.31e-306	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
CPBIPEFG_00544	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
CPBIPEFG_00545	1.78e-134	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CPBIPEFG_00546	8.29e-252	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
CPBIPEFG_00547	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CPBIPEFG_00548	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CPBIPEFG_00549	5.48e-164	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CPBIPEFG_00550	1.55e-51	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CPBIPEFG_00551	7.17e-172	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
CPBIPEFG_00552	6.36e-277	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CPBIPEFG_00553	3.23e-103	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CPBIPEFG_00554	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
CPBIPEFG_00555	3.72e-159	-	-	-	C	-	-	-	Flavodoxin
CPBIPEFG_00556	9.65e-193	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
CPBIPEFG_00557	1.87e-68	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CPBIPEFG_00558	3.05e-21	-	-	-	-	-	-	-	-
CPBIPEFG_00559	1.53e-246	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CPBIPEFG_00560	1.05e-47	-	-	-	M	-	-	-	Peptidase family M1 domain
CPBIPEFG_00561	2.69e-178	-	-	-	M	-	-	-	Peptidase family M1 domain
CPBIPEFG_00562	2.61e-76	-	-	-	M	-	-	-	Peptidase family M1 domain
CPBIPEFG_00563	2.38e-225	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_00564	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
CPBIPEFG_00565	0.0	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_00566	3.06e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CPBIPEFG_00567	1.64e-72	ytpP	-	-	CO	-	-	-	Thioredoxin
CPBIPEFG_00568	7.82e-161	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CPBIPEFG_00569	5.32e-268	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
CPBIPEFG_00570	9.02e-175	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_00571	6.86e-72	-	-	-	K	ko:K21498	-	ko00000,ko02048	Helix-turn-helix XRE-family like proteins
CPBIPEFG_00572	3.94e-103	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
CPBIPEFG_00573	3.49e-56	-	-	-	-	-	-	-	-
CPBIPEFG_00574	5.64e-200	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CPBIPEFG_00575	1.19e-97	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CPBIPEFG_00576	1.16e-241	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
CPBIPEFG_00577	0.0	yhaN	-	-	L	-	-	-	AAA domain
CPBIPEFG_00578	5.59e-290	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
CPBIPEFG_00579	2.07e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
CPBIPEFG_00580	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
CPBIPEFG_00581	7.82e-204	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
CPBIPEFG_00582	3.87e-12	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
CPBIPEFG_00583	4.77e-59	mgtC3	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
CPBIPEFG_00584	2.22e-67	mgtC3	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
CPBIPEFG_00585	4.31e-179	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
CPBIPEFG_00586	3.89e-287	ptcC	-	-	U	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CPBIPEFG_00587	8.82e-113	yecA	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CPBIPEFG_00588	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CPBIPEFG_00589	8.14e-73	-	-	-	-	-	-	-	-
CPBIPEFG_00590	1.44e-188	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
CPBIPEFG_00591	1.72e-214	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CPBIPEFG_00592	3.93e-199	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
CPBIPEFG_00593	4.23e-212	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
CPBIPEFG_00594	5.77e-102	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
CPBIPEFG_00595	2.04e-117	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
CPBIPEFG_00596	3.14e-276	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
CPBIPEFG_00597	5.82e-35	-	-	-	-	-	-	-	-
CPBIPEFG_00599	1.5e-310	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CPBIPEFG_00600	3.71e-265	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
CPBIPEFG_00601	6.35e-164	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CPBIPEFG_00602	2.75e-287	-	-	-	E	ko:K03294	-	ko00000	amino acid
CPBIPEFG_00603	5.81e-131	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CPBIPEFG_00604	1.29e-312	yhdP	-	-	S	-	-	-	Transporter associated domain
CPBIPEFG_00605	3.57e-34	-	-	-	C	-	-	-	nitroreductase
CPBIPEFG_00606	2.85e-23	-	-	-	C	-	-	-	nitroreductase
CPBIPEFG_00607	2.89e-52	-	-	-	-	-	-	-	-
CPBIPEFG_00608	9.32e-112	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CPBIPEFG_00609	1.06e-94	-	-	-	-	-	-	-	-
CPBIPEFG_00610	3.43e-184	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
CPBIPEFG_00611	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
CPBIPEFG_00612	2.23e-110	-	-	-	S	-	-	-	hydrolase
CPBIPEFG_00613	2.65e-18	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
CPBIPEFG_00614	1.59e-206	-	-	-	S	-	-	-	Phospholipase, patatin family
CPBIPEFG_00615	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
CPBIPEFG_00616	6.48e-173	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
CPBIPEFG_00617	1.4e-74	-	-	-	S	-	-	-	Enterocin A Immunity
CPBIPEFG_00618	1.51e-73	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CPBIPEFG_00619	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
CPBIPEFG_00620	1.07e-104	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
CPBIPEFG_00621	6.39e-299	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CPBIPEFG_00622	4.53e-301	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
CPBIPEFG_00623	2.13e-186	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
CPBIPEFG_00624	4.69e-32	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CPBIPEFG_00625	2.59e-31	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CPBIPEFG_00626	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CPBIPEFG_00627	1.98e-193	-	-	-	-	-	-	-	-
CPBIPEFG_00628	6.72e-286	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CPBIPEFG_00629	1.6e-278	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CPBIPEFG_00630	5.7e-299	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CPBIPEFG_00631	1.31e-135	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
CPBIPEFG_00632	0.0	potE	-	-	E	-	-	-	Amino Acid
CPBIPEFG_00633	5.52e-240	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CPBIPEFG_00634	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CPBIPEFG_00635	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CPBIPEFG_00636	2.94e-108	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
CPBIPEFG_00637	2.32e-280	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
CPBIPEFG_00638	3.65e-222	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CPBIPEFG_00639	3.67e-180	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CPBIPEFG_00640	3.01e-272	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CPBIPEFG_00641	1.43e-251	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CPBIPEFG_00642	1.06e-260	pbpX1	-	-	V	-	-	-	Beta-lactamase
CPBIPEFG_00643	1.43e-134	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
CPBIPEFG_00644	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CPBIPEFG_00645	2.91e-47	-	-	-	C	-	-	-	FMN_bind
CPBIPEFG_00646	2.6e-107	-	-	-	-	-	-	-	-
CPBIPEFG_00647	6.22e-127	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
CPBIPEFG_00648	3.96e-74	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
CPBIPEFG_00649	3.48e-36	ydhF	-	-	S	-	-	-	Aldo keto reductase
CPBIPEFG_00650	9.89e-35	ydhF	-	-	S	-	-	-	Aldo keto reductase
CPBIPEFG_00651	2.48e-64	ydhF	-	-	S	-	-	-	Aldo keto reductase
CPBIPEFG_00652	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CPBIPEFG_00653	1.61e-138	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
CPBIPEFG_00654	9.69e-72	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CPBIPEFG_00655	2.12e-77	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
CPBIPEFG_00656	1.91e-233	-	-	-	S	-	-	-	AAA domain
CPBIPEFG_00657	1.98e-163	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CPBIPEFG_00658	4.73e-31	-	-	-	-	-	-	-	-
CPBIPEFG_00659	5.3e-209	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
CPBIPEFG_00660	6.64e-162	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
CPBIPEFG_00661	3.13e-173	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
CPBIPEFG_00662	1.63e-81	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CPBIPEFG_00663	1.22e-139	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
CPBIPEFG_00664	3.32e-93	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
CPBIPEFG_00665	1.01e-87	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
CPBIPEFG_00666	1.87e-102	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CPBIPEFG_00667	3.02e-183	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CPBIPEFG_00668	5.22e-179	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CPBIPEFG_00669	1.45e-190	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CPBIPEFG_00670	2.69e-195	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CPBIPEFG_00671	3.16e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
CPBIPEFG_00672	1.8e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CPBIPEFG_00673	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CPBIPEFG_00674	1.46e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CPBIPEFG_00675	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
CPBIPEFG_00676	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CPBIPEFG_00677	2.61e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CPBIPEFG_00678	7.24e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CPBIPEFG_00679	1.73e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CPBIPEFG_00680	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
CPBIPEFG_00681	2.63e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CPBIPEFG_00682	1.05e-72	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CPBIPEFG_00683	5.05e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CPBIPEFG_00684	2.28e-89	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CPBIPEFG_00685	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CPBIPEFG_00686	2.9e-122	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CPBIPEFG_00687	6.92e-45	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CPBIPEFG_00688	2.55e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CPBIPEFG_00689	4.48e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CPBIPEFG_00690	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
CPBIPEFG_00691	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CPBIPEFG_00692	3.03e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CPBIPEFG_00693	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CPBIPEFG_00694	2.94e-60	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CPBIPEFG_00695	1.91e-196	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CPBIPEFG_00696	3.16e-61	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CPBIPEFG_00697	2.23e-136	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
CPBIPEFG_00698	3.29e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CPBIPEFG_00699	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
CPBIPEFG_00700	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CPBIPEFG_00701	1.39e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CPBIPEFG_00702	7.28e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CPBIPEFG_00703	1.56e-156	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
CPBIPEFG_00704	8.45e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
CPBIPEFG_00705	2.55e-246	pbpX1	-	-	V	-	-	-	Beta-lactamase
CPBIPEFG_00706	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
CPBIPEFG_00707	6.11e-262	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
CPBIPEFG_00708	2.12e-43	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
CPBIPEFG_00709	1.03e-203	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
CPBIPEFG_00710	3.77e-213	-	-	-	G	-	-	-	Phosphotransferase enzyme family
CPBIPEFG_00711	6.49e-245	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CPBIPEFG_00712	5.85e-38	-	-	-	-	-	-	-	-
CPBIPEFG_00713	2.03e-184	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
CPBIPEFG_00714	0.0	fusA1	-	-	J	-	-	-	elongation factor G
CPBIPEFG_00715	6.34e-172	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CPBIPEFG_00716	1.78e-218	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
CPBIPEFG_00717	2.25e-166	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CPBIPEFG_00718	4.93e-166	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_00719	3.14e-53	-	-	-	-	-	-	-	-
CPBIPEFG_00720	4.97e-24	-	-	-	-	-	-	-	-
CPBIPEFG_00721	1.08e-131	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CPBIPEFG_00722	3.31e-221	ydbI	-	-	K	-	-	-	AI-2E family transporter
CPBIPEFG_00723	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
CPBIPEFG_00724	4.63e-78	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
CPBIPEFG_00725	6.12e-112	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF transporter, substrate-specific component
CPBIPEFG_00726	3.65e-128	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
CPBIPEFG_00727	5.71e-192	-	-	-	S	-	-	-	Putative ABC-transporter type IV
CPBIPEFG_00728	6.3e-308	-	-	-	S	-	-	-	LPXTG cell wall anchor motif
CPBIPEFG_00729	1.67e-105	-	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CPBIPEFG_00730	3.09e-52	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CPBIPEFG_00731	6.2e-53	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CPBIPEFG_00732	4.52e-62	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CPBIPEFG_00733	8.99e-99	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
CPBIPEFG_00734	3.29e-232	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CPBIPEFG_00735	2.2e-70	ftsL	-	-	D	-	-	-	Cell division protein FtsL
CPBIPEFG_00736	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CPBIPEFG_00737	5.4e-225	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CPBIPEFG_00738	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CPBIPEFG_00739	9.95e-267	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CPBIPEFG_00740	2.83e-181	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
CPBIPEFG_00741	4.95e-305	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CPBIPEFG_00742	5.53e-262	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CPBIPEFG_00743	1.04e-94	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CPBIPEFG_00744	5.07e-62	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
CPBIPEFG_00745	1.1e-189	ylmH	-	-	S	-	-	-	S4 domain protein
CPBIPEFG_00746	4.81e-163	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
CPBIPEFG_00747	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CPBIPEFG_00748	1.15e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
CPBIPEFG_00749	3.64e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
CPBIPEFG_00750	2.13e-55	-	-	-	-	-	-	-	-
CPBIPEFG_00751	1.69e-162	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CPBIPEFG_00752	1.28e-273	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CPBIPEFG_00753	2.01e-74	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
CPBIPEFG_00754	3.28e-280	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CPBIPEFG_00755	7.2e-158	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
CPBIPEFG_00756	1.82e-144	-	-	-	S	-	-	-	repeat protein
CPBIPEFG_00757	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
CPBIPEFG_00758	6.34e-201	-	-	-	-	-	-	-	-
CPBIPEFG_00759	1.03e-207	-	-	-	-	-	-	-	-
CPBIPEFG_00760	1.63e-173	-	-	-	-	-	-	-	-
CPBIPEFG_00761	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
CPBIPEFG_00762	7.4e-89	ynbB	-	-	P	-	-	-	aluminum resistance
CPBIPEFG_00763	1.58e-109	ynbB	-	-	P	-	-	-	aluminum resistance
CPBIPEFG_00764	4.76e-61	ynbB	-	-	P	-	-	-	aluminum resistance
CPBIPEFG_00765	3.23e-218	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CPBIPEFG_00766	7.04e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
CPBIPEFG_00767	2.45e-44	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
CPBIPEFG_00768	1.42e-147	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
CPBIPEFG_00769	3.12e-129	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CPBIPEFG_00770	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
CPBIPEFG_00771	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CPBIPEFG_00772	2.32e-203	-	-	-	S	-	-	-	membrane
CPBIPEFG_00773	0.0	-	-	-	S	-	-	-	membrane
CPBIPEFG_00774	5.79e-217	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
CPBIPEFG_00775	1.18e-274	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
CPBIPEFG_00776	1.37e-94	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CPBIPEFG_00777	2.58e-163	-	-	-	F	-	-	-	NUDIX domain
CPBIPEFG_00778	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CPBIPEFG_00779	1.97e-140	pncA	-	-	Q	-	-	-	Isochorismatase family
CPBIPEFG_00780	1.34e-261	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CPBIPEFG_00781	2.37e-175	nirC	-	-	P	ko:K02598	-	ko00000,ko02000	Formate/nitrite transporter
CPBIPEFG_00782	3.01e-153	-	-	-	S	-	-	-	PAS domain
CPBIPEFG_00783	7.56e-157	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
CPBIPEFG_00784	1.73e-30	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
CPBIPEFG_00785	1.06e-37	-	-	-	S	-	-	-	Enterocin A Immunity
CPBIPEFG_00786	9.69e-100	-	-	-	-	-	-	-	-
CPBIPEFG_00787	6.29e-307	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CPBIPEFG_00788	6.67e-40	-	-	-	K	-	-	-	Protein of unknown function (DUF4065)
CPBIPEFG_00789	1.88e-90	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
CPBIPEFG_00790	8.42e-85	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CPBIPEFG_00791	9.89e-278	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CPBIPEFG_00792	3.61e-157	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
CPBIPEFG_00793	3.93e-109	yfhC	-	-	C	-	-	-	nitroreductase
CPBIPEFG_00794	2.3e-99	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
CPBIPEFG_00795	1.23e-311	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CPBIPEFG_00796	3.59e-164	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CPBIPEFG_00797	1.26e-126	-	-	-	I	-	-	-	PAP2 superfamily
CPBIPEFG_00798	2.94e-117	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CPBIPEFG_00799	5.43e-48	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CPBIPEFG_00801	2.72e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CPBIPEFG_00802	1.3e-239	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CPBIPEFG_00803	1.92e-123	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CPBIPEFG_00804	2.08e-21	ps301	-	-	K	-	-	-	sequence-specific DNA binding
CPBIPEFG_00805	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
CPBIPEFG_00806	3.21e-208	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CPBIPEFG_00807	1.46e-240	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CPBIPEFG_00808	4.88e-131	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CPBIPEFG_00809	4.08e-47	-	-	-	-	-	-	-	-
CPBIPEFG_00810	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
CPBIPEFG_00811	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CPBIPEFG_00812	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CPBIPEFG_00813	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CPBIPEFG_00814	4.38e-188	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CPBIPEFG_00815	1.31e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CPBIPEFG_00816	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
CPBIPEFG_00817	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CPBIPEFG_00818	5.01e-255	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CPBIPEFG_00819	4.08e-47	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
CPBIPEFG_00820	2.09e-267	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CPBIPEFG_00821	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CPBIPEFG_00822	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CPBIPEFG_00823	1.93e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
CPBIPEFG_00824	4.15e-109	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CPBIPEFG_00825	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CPBIPEFG_00826	1.25e-57	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CPBIPEFG_00827	3.23e-138	pfoSR	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
CPBIPEFG_00828	2.41e-31	pfoSR	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
CPBIPEFG_00830	1.53e-102	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
CPBIPEFG_00831	1.78e-218	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
CPBIPEFG_00832	9.44e-169	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
CPBIPEFG_00833	1.5e-150	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
CPBIPEFG_00834	1.25e-128	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
CPBIPEFG_00835	2.77e-144	-	-	-	G	-	-	-	Phosphoglycerate mutase family
CPBIPEFG_00836	1.13e-248	-	-	-	D	-	-	-	nuclear chromosome segregation
CPBIPEFG_00837	8.58e-126	-	-	-	M	-	-	-	LysM domain protein
CPBIPEFG_00838	5.26e-19	-	-	-	-	-	-	-	-
CPBIPEFG_00839	2.45e-81	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CPBIPEFG_00840	1.16e-87	-	-	-	G	ko:K02744	ko00052,ko02060,map00052,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
CPBIPEFG_00841	9.97e-119	levB	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CPBIPEFG_00842	6.95e-184	levC	-	-	M	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
CPBIPEFG_00843	4.31e-194	levD	-	-	G	ko:K02771	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
CPBIPEFG_00844	5.78e-63	-	-	-	-	-	-	-	-
CPBIPEFG_00845	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CPBIPEFG_00846	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CPBIPEFG_00847	1.47e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CPBIPEFG_00848	4.17e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CPBIPEFG_00849	1.42e-76	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CPBIPEFG_00850	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CPBIPEFG_00851	9.26e-270	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CPBIPEFG_00852	1.56e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
CPBIPEFG_00853	5.24e-312	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
CPBIPEFG_00854	2.03e-80	-	-	-	-	-	-	-	-
CPBIPEFG_00855	3.15e-67	-	-	-	-	-	-	-	-
CPBIPEFG_00856	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CPBIPEFG_00857	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
CPBIPEFG_00858	2.69e-95	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CPBIPEFG_00859	1.18e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
CPBIPEFG_00860	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CPBIPEFG_00861	2.19e-71	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
CPBIPEFG_00862	1.24e-277	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CPBIPEFG_00864	4.39e-281	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CPBIPEFG_00865	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
CPBIPEFG_00866	4.28e-312	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
CPBIPEFG_00867	1.43e-96	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CPBIPEFG_00868	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CPBIPEFG_00869	8.96e-79	-	-	-	-	-	-	-	-
CPBIPEFG_00870	7.07e-222	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
CPBIPEFG_00871	1.52e-114	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CPBIPEFG_00873	3.91e-26	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CPBIPEFG_00875	3.71e-34	-	-	-	-	ko:K14201	ko05150,map05150	ko00000,ko00001	-
CPBIPEFG_00876	1.42e-123	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
CPBIPEFG_00877	1.38e-309	-	-	-	S	-	-	-	Putative threonine/serine exporter
CPBIPEFG_00878	2.82e-214	citR	-	-	K	-	-	-	Putative sugar-binding domain
CPBIPEFG_00879	2.48e-69	-	-	-	-	-	-	-	-
CPBIPEFG_00880	2.72e-85	-	-	-	S	-	-	-	Domain of unknown function DUF1828
CPBIPEFG_00881	1.8e-123	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
CPBIPEFG_00882	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_00883	4.46e-190	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
CPBIPEFG_00884	1.01e-24	-	-	-	-	-	-	-	-
CPBIPEFG_00885	1.45e-92	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
CPBIPEFG_00886	9.39e-85	-	-	-	-	-	-	-	-
CPBIPEFG_00887	2.95e-21	-	-	-	K	-	-	-	Helix-turn-helix domain
CPBIPEFG_00888	5.21e-164	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CPBIPEFG_00889	3.61e-178	-	-	-	K	-	-	-	Helix-turn-helix domain
CPBIPEFG_00890	7.99e-294	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CPBIPEFG_00891	8.68e-277	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CPBIPEFG_00892	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CPBIPEFG_00893	2.95e-140	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CPBIPEFG_00894	5.05e-104	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
CPBIPEFG_00895	6.53e-307	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
CPBIPEFG_00896	4.53e-55	-	-	-	-	-	-	-	-
CPBIPEFG_00897	9.45e-104	uspA	-	-	T	-	-	-	universal stress protein
CPBIPEFG_00898	6.85e-275	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
CPBIPEFG_00899	8.85e-47	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
CPBIPEFG_00900	4.39e-66	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
CPBIPEFG_00901	7.96e-226	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
CPBIPEFG_00902	4.22e-41	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
CPBIPEFG_00903	4.95e-93	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
CPBIPEFG_00904	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CPBIPEFG_00905	8.2e-219	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CPBIPEFG_00906	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CPBIPEFG_00907	1.54e-118	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CPBIPEFG_00908	4.97e-95	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CPBIPEFG_00909	4.83e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CPBIPEFG_00910	4.82e-165	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
CPBIPEFG_00911	2.15e-145	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CPBIPEFG_00912	7.56e-242	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CPBIPEFG_00913	2.42e-200	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CPBIPEFG_00914	7.36e-234	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CPBIPEFG_00915	4.94e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
CPBIPEFG_00916	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
CPBIPEFG_00919	2.36e-247	ampC	-	-	V	-	-	-	Beta-lactamase
CPBIPEFG_00920	4.84e-50	-	-	-	EGP	-	-	-	Major Facilitator
CPBIPEFG_00921	5.35e-159	-	-	-	EGP	-	-	-	Major Facilitator
CPBIPEFG_00922	1.89e-19	-	-	-	EGP	-	-	-	Major Facilitator
CPBIPEFG_00923	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
CPBIPEFG_00924	1.3e-139	vanZ	-	-	V	-	-	-	VanZ like family
CPBIPEFG_00925	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CPBIPEFG_00926	0.0	yclK	-	-	T	-	-	-	Histidine kinase
CPBIPEFG_00927	4.46e-167	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
CPBIPEFG_00928	5.73e-80	-	-	-	S	-	-	-	SdpI/YhfL protein family
CPBIPEFG_00929	9.25e-221	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
CPBIPEFG_00930	3.87e-284	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
CPBIPEFG_00931	1.64e-40	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
CPBIPEFG_00932	2.64e-50	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
CPBIPEFG_00934	2.5e-233	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CPBIPEFG_00935	7.76e-32	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CPBIPEFG_00936	4.89e-238	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
CPBIPEFG_00937	9.9e-105	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
CPBIPEFG_00938	1.18e-55	-	-	-	-	-	-	-	-
CPBIPEFG_00939	2.04e-95	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
CPBIPEFG_00940	6.9e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
CPBIPEFG_00941	1.86e-222	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
CPBIPEFG_00942	1.55e-225	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
CPBIPEFG_00943	2.3e-170	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
CPBIPEFG_00944	9.51e-119	-	-	-	S	-	-	-	VanZ like family
CPBIPEFG_00946	0.0	-	-	-	E	-	-	-	Amino acid permease
CPBIPEFG_00947	9.83e-235	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CPBIPEFG_00948	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CPBIPEFG_00949	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CPBIPEFG_00950	1.14e-175	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
CPBIPEFG_00951	3.38e-273	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
CPBIPEFG_00952	2.06e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CPBIPEFG_00953	3.74e-153	-	-	-	-	-	-	-	-
CPBIPEFG_00954	8.04e-190	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CPBIPEFG_00955	2.4e-191	-	-	-	S	-	-	-	hydrolase
CPBIPEFG_00956	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CPBIPEFG_00957	2.51e-216	ybbR	-	-	S	-	-	-	YbbR-like protein
CPBIPEFG_00958	5.87e-192	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CPBIPEFG_00959	3.71e-261	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CPBIPEFG_00960	3.09e-178	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CPBIPEFG_00961	5.95e-176	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CPBIPEFG_00962	9.1e-262	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CPBIPEFG_00963	1.71e-209	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
CPBIPEFG_00964	7.47e-128	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CPBIPEFG_00965	1.87e-118	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
CPBIPEFG_00966	3.03e-230	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
CPBIPEFG_00967	7.79e-173	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CPBIPEFG_00968	1.15e-200	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CPBIPEFG_00969	3.58e-124	-	-	-	-	-	-	-	-
CPBIPEFG_00970	2.71e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CPBIPEFG_00971	6.01e-288	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
CPBIPEFG_00972	1.16e-243	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CPBIPEFG_00973	6.71e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
CPBIPEFG_00975	2.76e-68	-	-	-	-	-	-	-	-
CPBIPEFG_00976	2.99e-82	-	-	-	-	-	-	-	-
CPBIPEFG_00977	1.04e-150	-	-	-	-	-	-	-	-
CPBIPEFG_00978	0.0	ycaM	-	-	E	-	-	-	amino acid
CPBIPEFG_00979	8.38e-192	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CPBIPEFG_00980	0.0	-	-	-	S	-	-	-	SH3-like domain
CPBIPEFG_00981	4.53e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CPBIPEFG_00982	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CPBIPEFG_00983	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CPBIPEFG_00984	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CPBIPEFG_00985	9.59e-289	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
CPBIPEFG_00986	1.46e-145	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
CPBIPEFG_00987	4.99e-252	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
CPBIPEFG_00988	1.1e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
CPBIPEFG_00989	2.15e-236	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CPBIPEFG_00990	2.38e-167	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
CPBIPEFG_00991	8.57e-122	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CPBIPEFG_00992	2.23e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CPBIPEFG_00993	1.62e-189	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
CPBIPEFG_00994	9.05e-254	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
CPBIPEFG_00995	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CPBIPEFG_00996	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CPBIPEFG_00997	8.23e-219	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
CPBIPEFG_00998	1.27e-247	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
CPBIPEFG_00999	2.09e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
CPBIPEFG_01000	7.57e-109	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
CPBIPEFG_01001	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CPBIPEFG_01002	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CPBIPEFG_01003	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
CPBIPEFG_01004	0.0	malZ	3.2.1.20, 3.2.1.41	CBM48,GH13,GH31	G	ko:K01187,ko:K01200	ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
CPBIPEFG_01005	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
CPBIPEFG_01006	0.0	glgA	2.4.1.21	GT5	F	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Synthesizes alpha-1,4-glucan chains using ADP-glucose
CPBIPEFG_01007	1.28e-276	glgD	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
CPBIPEFG_01008	6.74e-267	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CPBIPEFG_01009	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CPBIPEFG_01010	1.04e-61	-	-	-	S	-	-	-	Domain of unknown function (DUF4160)
CPBIPEFG_01011	2.26e-68	-	-	-	-	-	-	-	-
CPBIPEFG_01012	5.11e-258	-	-	-	G	-	-	-	Major Facilitator Superfamily
CPBIPEFG_01013	9.89e-64	-	-	-	-	-	-	-	-
CPBIPEFG_01014	3.66e-123	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CPBIPEFG_01015	3.36e-61	-	-	-	-	-	-	-	-
CPBIPEFG_01016	3.41e-152	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
CPBIPEFG_01017	3.15e-198	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
CPBIPEFG_01018	2.27e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CPBIPEFG_01019	2.63e-207	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CPBIPEFG_01020	9.75e-174	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_01021	9.35e-152	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
CPBIPEFG_01022	4.13e-148	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
CPBIPEFG_01023	5.7e-44	-	-	-	-	-	-	-	-
CPBIPEFG_01024	2.77e-30	-	-	-	-	-	-	-	-
CPBIPEFG_01025	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CPBIPEFG_01027	1.38e-121	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_01028	2.9e-69	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_01029	2.02e-29	-	-	-	L	ko:K07484	-	ko00000	IS66 Orf2 like protein
CPBIPEFG_01030	2.44e-25	-	-	-	-	-	-	-	-
CPBIPEFG_01031	0.0	-	-	-	L	-	-	-	Transposase
CPBIPEFG_01032	2.31e-79	-	-	-	M	-	-	-	the current gene model (or a revised gene model) may contain a
CPBIPEFG_01033	2.37e-20	-	-	-	-	-	-	-	-
CPBIPEFG_01034	1.43e-45	-	2.1.1.113	-	L	ko:K00590	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
CPBIPEFG_01035	5.89e-234	trpD	2.4.2.18, 4.1.3.27	-	F	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CPBIPEFG_01036	2.18e-172	trpC	4.1.1.48, 5.3.1.24	-	E	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
CPBIPEFG_01037	5.94e-127	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
CPBIPEFG_01038	3.37e-291	trpB	4.2.1.20, 5.3.1.24	-	E	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
CPBIPEFG_01039	3.96e-182	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
CPBIPEFG_01040	9.06e-156	-	-	-	L	-	-	-	Transposase DDE domain
CPBIPEFG_01041	1.3e-202	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CPBIPEFG_01042	6.74e-214	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
CPBIPEFG_01043	1.81e-273	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
CPBIPEFG_01044	4.92e-124	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Bacterial transferase hexapeptide (six repeats)
CPBIPEFG_01045	4.43e-105	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CPBIPEFG_01046	2.87e-53	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CPBIPEFG_01047	2.59e-86	-	-	-	L	-	-	-	Transposase
CPBIPEFG_01048	1.71e-30	-	3.2.1.4	GH5,GH9	M	ko:K01179	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	domain protein
CPBIPEFG_01049	6.51e-83	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CPBIPEFG_01051	1.03e-49	-	-	-	-	-	-	-	-
CPBIPEFG_01052	1.18e-140	-	-	-	K	-	-	-	WHG domain
CPBIPEFG_01053	1.14e-123	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CPBIPEFG_01054	1.05e-125	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CPBIPEFG_01055	4.51e-192	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CPBIPEFG_01056	6.37e-231	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CPBIPEFG_01057	2.12e-114	cvpA	-	-	S	-	-	-	Colicin V production protein
CPBIPEFG_01058	9.37e-169	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
CPBIPEFG_01059	3.14e-191	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CPBIPEFG_01060	2.77e-175	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
CPBIPEFG_01061	2.29e-196	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CPBIPEFG_01062	1.83e-58	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
CPBIPEFG_01063	1.97e-256	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CPBIPEFG_01064	2.2e-177	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
CPBIPEFG_01065	4.53e-69	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_01066	2.51e-298	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_01067	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
CPBIPEFG_01068	1.18e-156	vanR	-	-	K	-	-	-	response regulator
CPBIPEFG_01069	2.09e-266	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
CPBIPEFG_01070	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CPBIPEFG_01071	3.86e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
CPBIPEFG_01072	9.17e-84	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CPBIPEFG_01073	6.04e-200	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
CPBIPEFG_01074	2.53e-195	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CPBIPEFG_01075	3.51e-12	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CPBIPEFG_01076	9.13e-283	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CPBIPEFG_01077	5.18e-250	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CPBIPEFG_01078	4.02e-186	epsB	-	-	M	-	-	-	biosynthesis protein
CPBIPEFG_01079	1.47e-156	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
CPBIPEFG_01080	1.15e-186	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
CPBIPEFG_01081	2.32e-155	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
CPBIPEFG_01082	1.21e-108	-	-	-	M	-	-	-	Oligosaccharide biosynthesis protein Alg14 like
CPBIPEFG_01083	5.09e-100	-	-	-	S	-	-	-	Glycosyltransferase family 28 C-terminal domain
CPBIPEFG_01084	1.92e-182	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
CPBIPEFG_01085	1.28e-61	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
CPBIPEFG_01086	4.66e-101	-	2.7.8.12	GT2	S	ko:K09809,ko:K19427	-	ko00000,ko01000	Glycosyltransferase like family 2
CPBIPEFG_01087	9.57e-86	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
CPBIPEFG_01088	3.82e-44	-	-	-	S	-	-	-	Bacterial transferase hexapeptide (six repeats)
CPBIPEFG_01089	1.83e-47	-	-	-	-	-	-	-	-
CPBIPEFG_01090	4.48e-161	-	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
CPBIPEFG_01091	1.63e-27	-	-	-	E	-	-	-	Hexapeptide repeat of succinyl-transferase
CPBIPEFG_01092	6.09e-106	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
CPBIPEFG_01093	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
CPBIPEFG_01094	1.26e-101	-	-	-	C	-	-	-	Flavodoxin
CPBIPEFG_01095	9.85e-147	-	-	-	I	-	-	-	Acid phosphatase homologues
CPBIPEFG_01096	8.48e-145	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CPBIPEFG_01097	2.52e-263	-	-	-	V	-	-	-	Beta-lactamase
CPBIPEFG_01098	3.04e-191	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
CPBIPEFG_01099	3.35e-119	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
CPBIPEFG_01100	1.18e-293	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CPBIPEFG_01101	3.35e-74	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
CPBIPEFG_01102	1.58e-202	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
CPBIPEFG_01103	0.0	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CPBIPEFG_01104	9.66e-46	-	-	-	-	-	-	-	-
CPBIPEFG_01105	5.03e-20	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
CPBIPEFG_01106	4.35e-31	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
CPBIPEFG_01107	1.63e-79	-	-	-	-	-	-	-	-
CPBIPEFG_01108	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
CPBIPEFG_01109	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CPBIPEFG_01110	1.94e-125	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
CPBIPEFG_01111	3.06e-77	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
CPBIPEFG_01112	6.11e-37	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CPBIPEFG_01113	1.94e-55	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
CPBIPEFG_01114	2.26e-17	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
CPBIPEFG_01115	4.81e-21	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
CPBIPEFG_01116	4.43e-221	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CPBIPEFG_01117	8.05e-149	-	-	-	K	-	-	-	Rhodanese Homology Domain
CPBIPEFG_01118	1.04e-76	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin
CPBIPEFG_01119	6.68e-29	-	-	-	-	-	-	-	-
CPBIPEFG_01120	2.74e-81	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CPBIPEFG_01121	2.96e-30	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
CPBIPEFG_01122	9.71e-228	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
CPBIPEFG_01123	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CPBIPEFG_01124	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
CPBIPEFG_01125	2.45e-151	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
CPBIPEFG_01126	4.22e-186	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CPBIPEFG_01127	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
CPBIPEFG_01128	5.04e-278	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CPBIPEFG_01131	7.9e-214	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CPBIPEFG_01134	1.02e-196	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Quinolinate phosphoribosyl transferase, C-terminal domain
CPBIPEFG_01135	3.03e-277	yceI	-	-	EGP	ko:K08369	-	ko00000,ko02000	Major Facilitator
CPBIPEFG_01136	2.03e-170	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
CPBIPEFG_01137	2.53e-31	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
CPBIPEFG_01138	8.2e-102	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
CPBIPEFG_01139	2.06e-103	-	-	-	K	-	-	-	Transcriptional regulator
CPBIPEFG_01140	3.02e-229	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CPBIPEFG_01141	1.53e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CPBIPEFG_01142	1.66e-215	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
CPBIPEFG_01143	1.8e-163	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
CPBIPEFG_01144	8.97e-293	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
CPBIPEFG_01145	5.23e-102	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
CPBIPEFG_01146	1.64e-94	fabZ2	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
CPBIPEFG_01147	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
CPBIPEFG_01148	5.09e-202	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CPBIPEFG_01149	7.44e-183	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
CPBIPEFG_01150	8.96e-173	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
CPBIPEFG_01151	2.25e-241	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
CPBIPEFG_01152	2.46e-114	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
CPBIPEFG_01153	6.1e-113	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CPBIPEFG_01154	1.18e-168	-	-	-	-	-	-	-	-
CPBIPEFG_01155	3.43e-11	ohr	-	-	O	-	-	-	redox protein regulator of disulfide bond formation
CPBIPEFG_01156	6.65e-216	-	1.1.1.29	-	CH	ko:K00018	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CPBIPEFG_01157	3.17e-60	-	-	-	-	-	-	-	-
CPBIPEFG_01158	2.55e-61	-	-	-	-	-	-	-	-
CPBIPEFG_01159	1.15e-21	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
CPBIPEFG_01160	3.17e-28	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
CPBIPEFG_01161	1.1e-277	-	-	-	EGP	ko:K08196,ko:K08369	-	ko00000,ko02000	Major Facilitator
CPBIPEFG_01162	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CPBIPEFG_01163	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
CPBIPEFG_01164	2.11e-271	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
CPBIPEFG_01165	5.96e-82	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
CPBIPEFG_01167	4.02e-283	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CPBIPEFG_01168	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
CPBIPEFG_01169	1.6e-251	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
CPBIPEFG_01170	4.43e-143	-	-	-	V	-	-	-	Beta-lactamase
CPBIPEFG_01171	4.62e-136	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
CPBIPEFG_01172	1.91e-124	-	-	-	-	-	-	-	-
CPBIPEFG_01173	3.49e-48	-	-	-	-	-	-	-	-
CPBIPEFG_01174	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
CPBIPEFG_01175	6.25e-171	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
CPBIPEFG_01176	1.52e-237	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
CPBIPEFG_01177	1.46e-21	-	-	-	-	-	-	-	-
CPBIPEFG_01178	1.76e-160	-	-	-	-	-	-	-	-
CPBIPEFG_01179	2.44e-304	-	-	-	S	-	-	-	response to antibiotic
CPBIPEFG_01180	5.48e-23	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
CPBIPEFG_01181	4.36e-162	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
CPBIPEFG_01182	5.02e-158	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
CPBIPEFG_01183	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
CPBIPEFG_01184	8.97e-141	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CPBIPEFG_01185	1.57e-141	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
CPBIPEFG_01186	1.06e-192	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CPBIPEFG_01187	4.94e-103	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
CPBIPEFG_01188	3.38e-133	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CPBIPEFG_01189	5.55e-219	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
CPBIPEFG_01190	5.59e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CPBIPEFG_01191	1.9e-313	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CPBIPEFG_01192	6.39e-69	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CPBIPEFG_01194	2.65e-123	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
CPBIPEFG_01195	2.83e-237	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CPBIPEFG_01196	2.91e-229	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CPBIPEFG_01197	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
CPBIPEFG_01198	5.09e-160	-	-	-	S	-	-	-	PAS domain
CPBIPEFG_01199	3.9e-181	-	-	-	-	-	-	-	-
CPBIPEFG_01200	1.91e-180	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
CPBIPEFG_01201	1.82e-82	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
CPBIPEFG_01202	5.62e-138	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
CPBIPEFG_01203	7.26e-203	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CPBIPEFG_01204	8.85e-217	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
CPBIPEFG_01205	5.95e-203	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
CPBIPEFG_01206	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CPBIPEFG_01207	4.47e-255	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
CPBIPEFG_01208	1.15e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
CPBIPEFG_01209	6.84e-188	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CPBIPEFG_01210	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
CPBIPEFG_01211	7.08e-309	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CPBIPEFG_01212	1.36e-214	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CPBIPEFG_01213	4.96e-202	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
CPBIPEFG_01214	3.9e-125	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CPBIPEFG_01215	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
CPBIPEFG_01216	1.2e-207	-	-	-	-	-	-	-	-
CPBIPEFG_01217	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
CPBIPEFG_01218	9.35e-161	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
CPBIPEFG_01219	2.33e-195	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CPBIPEFG_01220	4.53e-139	-	-	-	S	-	-	-	SNARE associated Golgi protein
CPBIPEFG_01221	3.96e-126	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CPBIPEFG_01222	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CPBIPEFG_01223	2.72e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
CPBIPEFG_01224	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
CPBIPEFG_01225	6.65e-234	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
CPBIPEFG_01226	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
CPBIPEFG_01227	2.98e-214	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
CPBIPEFG_01228	1.48e-216	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
CPBIPEFG_01229	5.23e-77	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CPBIPEFG_01230	3e-168	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CPBIPEFG_01231	2.73e-133	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CPBIPEFG_01232	3.14e-166	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CPBIPEFG_01233	2.09e-146	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CPBIPEFG_01234	1.09e-66	-	-	-	M	-	-	-	Lysin motif
CPBIPEFG_01235	1.81e-149	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
CPBIPEFG_01236	8.97e-274	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
CPBIPEFG_01237	1.5e-311	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
CPBIPEFG_01238	1.36e-284	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
CPBIPEFG_01239	6.89e-97	-	-	-	M	-	-	-	NlpC/P60 family
CPBIPEFG_01240	7.78e-190	-	-	-	EG	-	-	-	EamA-like transporter family
CPBIPEFG_01241	9.7e-140	-	-	-	-	-	-	-	-
CPBIPEFG_01242	6.41e-101	-	-	-	-	-	-	-	-
CPBIPEFG_01243	4.57e-75	-	-	-	S	-	-	-	DUF218 domain
CPBIPEFG_01244	2.05e-130	-	-	-	S	-	-	-	DUF218 domain
CPBIPEFG_01245	2.18e-168	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
CPBIPEFG_01246	5.86e-39	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
CPBIPEFG_01247	2.58e-108	-	-	-	-	-	-	-	-
CPBIPEFG_01248	6.82e-74	-	-	-	-	-	-	-	-
CPBIPEFG_01249	2.19e-307	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CPBIPEFG_01250	1.38e-313	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CPBIPEFG_01251	4.71e-233	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CPBIPEFG_01254	1.75e-256	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
CPBIPEFG_01255	3.5e-249	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
CPBIPEFG_01256	6.47e-25	-	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
CPBIPEFG_01257	9.99e-12	-	-	-	-	-	-	-	-
CPBIPEFG_01258	7.26e-49	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	PFAM restriction modification system DNA specificity domain
CPBIPEFG_01259	4.59e-143	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
CPBIPEFG_01260	7.77e-166	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
CPBIPEFG_01261	2.22e-165	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
CPBIPEFG_01262	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
CPBIPEFG_01263	1.31e-295	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
CPBIPEFG_01264	4.56e-120	-	-	-	-	-	-	-	-
CPBIPEFG_01265	2.7e-154	-	-	-	-	-	-	-	-
CPBIPEFG_01266	3.36e-137	-	-	-	-	-	-	-	-
CPBIPEFG_01267	1.05e-162	-	-	-	S	-	-	-	L-ascorbic acid biosynthetic process
CPBIPEFG_01268	1.79e-92	-	-	-	O	-	-	-	OsmC-like protein
CPBIPEFG_01269	1.07e-263	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CPBIPEFG_01270	2.78e-71	sptS	-	-	T	-	-	-	Histidine kinase
CPBIPEFG_01271	7.85e-156	sptS	-	-	T	-	-	-	Histidine kinase
CPBIPEFG_01272	1.02e-103	dltr	-	-	K	-	-	-	response regulator
CPBIPEFG_01273	9.65e-105	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
CPBIPEFG_01274	1.14e-177	-	-	-	S	-	-	-	Putative threonine/serine exporter
CPBIPEFG_01275	0.0	-	-	-	S	-	-	-	ABC transporter
CPBIPEFG_01276	2.34e-74	-	-	-	-	-	-	-	-
CPBIPEFG_01277	1.89e-127	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CPBIPEFG_01278	6.66e-68	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
CPBIPEFG_01279	4.9e-283	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CPBIPEFG_01280	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
CPBIPEFG_01281	1.34e-34	-	-	-	S	-	-	-	Fic/DOC family
CPBIPEFG_01282	1.12e-63	-	-	-	S	-	-	-	Fic/DOC family
CPBIPEFG_01283	2.19e-56	-	-	-	S	-	-	-	Enterocin A Immunity
CPBIPEFG_01284	1.22e-53	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CPBIPEFG_01285	6.39e-26	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CPBIPEFG_01286	4.15e-60	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CPBIPEFG_01287	1.12e-87	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CPBIPEFG_01288	1.34e-297	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
CPBIPEFG_01289	9.17e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
CPBIPEFG_01290	9.45e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
CPBIPEFG_01291	2.98e-201	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CPBIPEFG_01292	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CPBIPEFG_01293	1.01e-161	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CPBIPEFG_01294	5.12e-233	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Beta-lactamase
CPBIPEFG_01295	6.62e-180	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
CPBIPEFG_01296	3.09e-128	-	-	-	K	-	-	-	rpiR family
CPBIPEFG_01297	7.74e-172	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CPBIPEFG_01298	2.08e-203	-	-	-	S	-	-	-	Aldo/keto reductase family
CPBIPEFG_01299	1.33e-126	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CPBIPEFG_01300	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_01301	1.79e-248	-	-	-	S	-	-	-	DUF218 domain
CPBIPEFG_01302	3.04e-154	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CPBIPEFG_01303	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
CPBIPEFG_01304	1.11e-51	-	-	-	-	-	-	-	-
CPBIPEFG_01305	5.41e-123	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
CPBIPEFG_01306	6.05e-121	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
CPBIPEFG_01307	2.54e-38	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
CPBIPEFG_01308	4.85e-38	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CPBIPEFG_01309	1.34e-154	-	-	-	-	-	-	-	-
CPBIPEFG_01311	9e-46	-	-	-	-	-	-	-	-
CPBIPEFG_01313	2.3e-168	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
CPBIPEFG_01314	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CPBIPEFG_01315	8.07e-314	yycH	-	-	S	-	-	-	YycH protein
CPBIPEFG_01316	3.54e-190	yycI	-	-	S	-	-	-	YycH protein
CPBIPEFG_01317	8.73e-191	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
CPBIPEFG_01318	1.18e-274	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
CPBIPEFG_01319	2.23e-117	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CPBIPEFG_01320	8.04e-228	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
CPBIPEFG_01321	2.18e-132	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CPBIPEFG_01322	2.54e-286	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
CPBIPEFG_01323	1.16e-204	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
CPBIPEFG_01324	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CPBIPEFG_01325	1.57e-97	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
CPBIPEFG_01326	3e-309	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CPBIPEFG_01327	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CPBIPEFG_01328	4.53e-98	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
CPBIPEFG_01329	3.92e-86	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
CPBIPEFG_01330	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CPBIPEFG_01331	5.78e-57	-	-	-	-	-	-	-	-
CPBIPEFG_01332	4.99e-189	-	-	-	GK	-	-	-	ROK family
CPBIPEFG_01333	3.64e-224	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CPBIPEFG_01334	6.43e-270	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_01335	6.12e-193	-	-	-	S	-	-	-	reductase
CPBIPEFG_01336	2.01e-178	yxeH	-	-	S	-	-	-	hydrolase
CPBIPEFG_01337	2.84e-21	gyaR	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CPBIPEFG_01338	6.35e-173	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CPBIPEFG_01339	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
CPBIPEFG_01340	2.12e-80	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
CPBIPEFG_01341	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CPBIPEFG_01342	1.55e-308	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CPBIPEFG_01343	0.0	oatA	-	-	I	-	-	-	Acyltransferase
CPBIPEFG_01344	3.02e-226	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
CPBIPEFG_01345	1.13e-181	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
CPBIPEFG_01346	7.74e-47	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
CPBIPEFG_01347	3.62e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
CPBIPEFG_01348	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CPBIPEFG_01349	1.36e-267	-	-	-	C	-	-	-	Glycerophosphoryl diester phosphodiesterase family
CPBIPEFG_01350	1.2e-87	-	-	-	S	-	-	-	GtrA-like protein
CPBIPEFG_01351	1.47e-215	yfdH	-	GT2	M	ko:K12999,ko:K20534	-	ko00000,ko01000,ko01003,ko01005,ko02000	Glycosyltransferase like family 2
CPBIPEFG_01352	4.99e-71	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
CPBIPEFG_01353	1.21e-106	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
CPBIPEFG_01354	1.92e-114	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
CPBIPEFG_01355	1.19e-130	-	-	-	-	ko:K19167	-	ko00000,ko02048	-
CPBIPEFG_01356	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CPBIPEFG_01357	1.25e-302	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
CPBIPEFG_01358	4.33e-162	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
CPBIPEFG_01359	3.32e-148	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
CPBIPEFG_01360	8.26e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
CPBIPEFG_01361	3.36e-188	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
CPBIPEFG_01362	1.97e-124	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
CPBIPEFG_01363	1.09e-18	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
CPBIPEFG_01364	8.66e-70	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
CPBIPEFG_01365	4.42e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
CPBIPEFG_01366	4.76e-222	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
CPBIPEFG_01367	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
CPBIPEFG_01368	9.86e-130	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
CPBIPEFG_01369	3.91e-245	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
CPBIPEFG_01370	6.77e-111	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CPBIPEFG_01371	5e-124	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
CPBIPEFG_01372	1.72e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
CPBIPEFG_01373	3.86e-263	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
CPBIPEFG_01374	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
CPBIPEFG_01375	1.96e-131	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CPBIPEFG_01376	9e-46	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
CPBIPEFG_01377	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CPBIPEFG_01378	2.23e-35	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
CPBIPEFG_01379	1.24e-139	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
CPBIPEFG_01380	7.08e-252	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CPBIPEFG_01381	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CPBIPEFG_01382	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
CPBIPEFG_01383	5.4e-227	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
CPBIPEFG_01384	1.09e-172	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
CPBIPEFG_01385	1.48e-216	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CPBIPEFG_01386	2.33e-125	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CPBIPEFG_01387	2.03e-223	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
CPBIPEFG_01388	1.21e-89	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
CPBIPEFG_01389	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
CPBIPEFG_01390	7.77e-196	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
CPBIPEFG_01391	4.2e-115	-	-	-	S	-	-	-	Peptidase family M23
CPBIPEFG_01392	6.96e-206	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CPBIPEFG_01393	6.82e-138	-	-	-	-	-	-	-	-
CPBIPEFG_01394	1.11e-50	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CPBIPEFG_01395	9.16e-80	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CPBIPEFG_01396	5.13e-05	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CPBIPEFG_01397	3.33e-30	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
CPBIPEFG_01398	4.13e-154	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
CPBIPEFG_01399	2.62e-307	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
CPBIPEFG_01400	2.15e-72	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CPBIPEFG_01401	2.22e-157	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CPBIPEFG_01402	6.4e-131	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
CPBIPEFG_01403	1.55e-18	-	-	-	-	-	-	-	-
CPBIPEFG_01404	2.13e-77	-	-	-	-	-	-	-	-
CPBIPEFG_01405	5.96e-135	-	-	-	K	-	-	-	LysR substrate binding domain
CPBIPEFG_01406	6.5e-26	-	-	-	-	-	-	-	-
CPBIPEFG_01407	1.68e-275	-	-	-	S	-	-	-	Sterol carrier protein domain
CPBIPEFG_01408	2.22e-125	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
CPBIPEFG_01409	3.13e-208	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
CPBIPEFG_01410	7.26e-242	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CPBIPEFG_01411	8.99e-261	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
CPBIPEFG_01412	9.46e-200	lysR5	-	-	K	-	-	-	LysR substrate binding domain
CPBIPEFG_01413	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
CPBIPEFG_01414	1.78e-107	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
CPBIPEFG_01415	3.42e-73	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CPBIPEFG_01416	2.22e-116	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CPBIPEFG_01417	1.65e-77	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CPBIPEFG_01418	3.84e-189	metA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
CPBIPEFG_01419	5.75e-40	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
CPBIPEFG_01420	1.32e-148	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
CPBIPEFG_01421	8.09e-122	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CPBIPEFG_01422	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
CPBIPEFG_01423	1.31e-149	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
CPBIPEFG_01424	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CPBIPEFG_01425	1.13e-30	-	-	-	-	-	-	-	-
CPBIPEFG_01426	3.62e-268	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CPBIPEFG_01427	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
CPBIPEFG_01428	2.79e-115	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CPBIPEFG_01429	1.19e-237	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CPBIPEFG_01430	6.52e-226	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
CPBIPEFG_01431	6.73e-211	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CPBIPEFG_01432	4.6e-77	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CPBIPEFG_01433	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CPBIPEFG_01434	5.4e-63	ylxQ	-	-	J	-	-	-	ribosomal protein
CPBIPEFG_01435	9.2e-64	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
CPBIPEFG_01436	6.69e-264	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
CPBIPEFG_01437	8.01e-107	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
CPBIPEFG_01438	2.16e-192	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
CPBIPEFG_01439	5.67e-149	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
CPBIPEFG_01440	7.12e-111	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
CPBIPEFG_01441	1.24e-187	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
CPBIPEFG_01442	5.15e-127	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
CPBIPEFG_01443	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CPBIPEFG_01444	2.42e-74	-	-	-	-	-	-	-	-
CPBIPEFG_01445	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
CPBIPEFG_01446	1.68e-229	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
CPBIPEFG_01447	1.67e-274	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CPBIPEFG_01448	2.07e-65	-	-	-	-	-	-	-	-
CPBIPEFG_01449	3.11e-28	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CPBIPEFG_01450	3.01e-191	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
CPBIPEFG_01451	2.16e-148	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CPBIPEFG_01452	5.66e-188	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
CPBIPEFG_01453	2.98e-90	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
CPBIPEFG_01454	8.79e-67	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CPBIPEFG_01455	9.16e-123	-	-	-	K	-	-	-	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
CPBIPEFG_01456	1.12e-42	-	-	-	K	-	-	-	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
CPBIPEFG_01457	1.3e-121	-	-	-	K	-	-	-	acetyltransferase
CPBIPEFG_01458	9.82e-111	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
CPBIPEFG_01459	4.14e-214	snf	-	-	KL	-	-	-	domain protein
CPBIPEFG_01460	8.01e-134	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CPBIPEFG_01461	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CPBIPEFG_01462	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CPBIPEFG_01463	1.42e-217	-	-	-	K	-	-	-	Transcriptional regulator
CPBIPEFG_01464	3.5e-220	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
CPBIPEFG_01465	5.37e-143	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CPBIPEFG_01466	6.39e-73	-	-	-	K	-	-	-	Helix-turn-helix domain
CPBIPEFG_01467	4.69e-71	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
CPBIPEFG_01468	2.46e-289	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CPBIPEFG_01469	4.82e-46	-	-	-	-	-	-	-	-
CPBIPEFG_01470	8.25e-101	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
CPBIPEFG_01471	4.19e-84	-	-	-	S	-	-	-	Cupredoxin-like domain
CPBIPEFG_01472	2.57e-64	-	-	-	S	-	-	-	Cupredoxin-like domain
CPBIPEFG_01473	0.0	copA	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
CPBIPEFG_01474	7.33e-151	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
CPBIPEFG_01475	1.14e-90	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
CPBIPEFG_01476	6.46e-27	-	-	-	-	-	-	-	-
CPBIPEFG_01477	1.25e-264	-	-	-	-	-	-	-	-
CPBIPEFG_01478	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CPBIPEFG_01479	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CPBIPEFG_01480	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
CPBIPEFG_01481	4.04e-112	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
CPBIPEFG_01482	7.45e-120	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
CPBIPEFG_01483	6.1e-64	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
CPBIPEFG_01485	1.86e-303	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
CPBIPEFG_01486	1.75e-194	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CPBIPEFG_01487	7.45e-158	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
CPBIPEFG_01488	1.19e-118	-	-	-	K	-	-	-	Virulence activator alpha C-term
CPBIPEFG_01489	8.58e-139	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
CPBIPEFG_01490	1.03e-140	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CPBIPEFG_01491	5.02e-20	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CPBIPEFG_01492	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
CPBIPEFG_01493	4.95e-216	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
CPBIPEFG_01494	5.65e-75	-	-	-	L	-	-	-	NUDIX domain
CPBIPEFG_01495	5.88e-47	-	-	-	-	-	-	-	-
CPBIPEFG_01496	5.42e-42	-	-	-	-	-	-	-	-
CPBIPEFG_01498	3.61e-224	-	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CPBIPEFG_01499	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
CPBIPEFG_01500	0.0	nagZ	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolase family 3 N terminal domain
CPBIPEFG_01501	1.04e-20	-	-	-	V	-	-	-	Abi-like protein
CPBIPEFG_01502	7.82e-10	-	-	-	V	-	-	-	Abi-like protein
CPBIPEFG_01503	2.36e-22	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
CPBIPEFG_01505	8.68e-41	-	-	-	V	-	-	-	Abi-like protein
CPBIPEFG_01506	1.44e-21	-	-	-	V	-	-	-	Abi-like protein
CPBIPEFG_01507	6.24e-18	-	-	-	K	-	-	-	LysR substrate binding domain
CPBIPEFG_01508	6.28e-68	-	-	-	K	-	-	-	LysR substrate binding domain
CPBIPEFG_01509	2.41e-263	-	-	-	C	-	-	-	FAD binding domain
CPBIPEFG_01510	1.84e-135	-	-	-	K	-	-	-	Helix-turn-helix domain
CPBIPEFG_01511	1.21e-124	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CPBIPEFG_01512	4.65e-100	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_01513	6.55e-221	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CPBIPEFG_01514	7.55e-123	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
CPBIPEFG_01515	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_01516	1e-220	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CPBIPEFG_01517	3.17e-205	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
CPBIPEFG_01518	2.37e-124	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
CPBIPEFG_01519	1.07e-245	ysdE	-	-	P	-	-	-	Citrate transporter
CPBIPEFG_01520	1.36e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CPBIPEFG_01521	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
CPBIPEFG_01522	0.0	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
CPBIPEFG_01524	1.43e-84	hsdS	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
CPBIPEFG_01525	4.61e-118	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
CPBIPEFG_01526	7.22e-133	-	-	-	L	-	-	-	HTH-like domain
CPBIPEFG_01527	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
CPBIPEFG_01528	9.76e-104	-	-	-	U	-	-	-	FFAT motif binding
CPBIPEFG_01529	1.54e-62	-	-	-	U	-	-	-	FFAT motif binding
CPBIPEFG_01530	1.23e-162	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF-type riboflavin transporter, S component
CPBIPEFG_01531	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
CPBIPEFG_01532	1.48e-194	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type cobalt transport system permease component CbiQ and related transporters
CPBIPEFG_01536	7.07e-18	-	-	-	EP	-	-	-	Plasmid replication protein
CPBIPEFG_01537	1.33e-55	-	-	-	O	-	-	-	RNA helicase
CPBIPEFG_01539	4.38e-196	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CPBIPEFG_01540	3.52e-311	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CPBIPEFG_01542	1.21e-40	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
CPBIPEFG_01543	3.84e-145	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_01544	1.66e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
CPBIPEFG_01545	7.86e-50	-	-	-	K	-	-	-	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
CPBIPEFG_01546	3.39e-58	-	-	-	K	-	-	-	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
CPBIPEFG_01547	3.74e-175	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CPBIPEFG_01548	0.0	-	-	-	V	-	-	-	Restriction endonuclease
CPBIPEFG_01549	2.46e-184	-	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CPBIPEFG_01550	7.07e-38	tnpR	-	-	L	-	-	-	Resolvase, N terminal domain
CPBIPEFG_01551	9.3e-56	ymdB	-	-	S	-	-	-	Macro domain protein
CPBIPEFG_01552	3.99e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CPBIPEFG_01553	2.4e-312	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CPBIPEFG_01554	1.02e-277	malE	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CPBIPEFG_01555	3.19e-263	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CPBIPEFG_01556	2.04e-150	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
CPBIPEFG_01557	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
CPBIPEFG_01558	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
CPBIPEFG_01559	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
CPBIPEFG_01560	3.44e-57	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CPBIPEFG_01562	2.17e-112	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CPBIPEFG_01563	5.75e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CPBIPEFG_01564	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
CPBIPEFG_01565	5.17e-08	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
CPBIPEFG_01567	6.34e-136	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
CPBIPEFG_01568	4.61e-97	-	-	-	K	-	-	-	LytTr DNA-binding domain
CPBIPEFG_01569	1.14e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CPBIPEFG_01570	3.57e-136	-	-	-	L	-	-	-	Resolvase, N terminal domain
CPBIPEFG_01571	0.0	-	-	-	L	-	-	-	Probable transposase
CPBIPEFG_01572	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
CPBIPEFG_01573	4.34e-100	-	-	-	KLT	-	-	-	serine threonine protein kinase
CPBIPEFG_01574	6.97e-85	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
CPBIPEFG_01575	1.14e-111	-	-	-	-	-	-	-	-
CPBIPEFG_01576	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CPBIPEFG_01577	1.09e-226	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CPBIPEFG_01578	2.82e-185	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CPBIPEFG_01579	1.56e-181	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
CPBIPEFG_01580	1.07e-203	epsV	-	-	S	-	-	-	glycosyl transferase family 2
CPBIPEFG_01581	2.62e-164	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CPBIPEFG_01582	3.43e-148	-	-	-	GM	-	-	-	NmrA-like family
CPBIPEFG_01583	1.49e-71	-	-	-	-	-	-	-	-
CPBIPEFG_01584	6.88e-231	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CPBIPEFG_01585	2.58e-155	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CPBIPEFG_01586	3.27e-170	-	-	-	-	-	-	-	-
CPBIPEFG_01587	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CPBIPEFG_01588	5.22e-173	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_01589	2.12e-292	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CPBIPEFG_01590	1.46e-264	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
CPBIPEFG_01591	6.11e-152	-	-	-	-	-	-	-	-
CPBIPEFG_01592	3.81e-255	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
CPBIPEFG_01593	1.35e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
CPBIPEFG_01594	5.96e-202	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CPBIPEFG_01595	3.08e-43	-	-	-	-	-	-	-	-
CPBIPEFG_01596	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
CPBIPEFG_01597	8.67e-111	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
CPBIPEFG_01598	1.26e-111	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CPBIPEFG_01599	8.38e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CPBIPEFG_01600	3.78e-112	usp5	-	-	T	-	-	-	universal stress protein
CPBIPEFG_01602	4.39e-198	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
CPBIPEFG_01603	2.82e-178	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CPBIPEFG_01604	2.04e-164	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CPBIPEFG_01605	4.13e-187	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CPBIPEFG_01606	7.09e-77	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
CPBIPEFG_01607	4.98e-107	-	-	-	-	-	-	-	-
CPBIPEFG_01608	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CPBIPEFG_01609	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
CPBIPEFG_01610	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
CPBIPEFG_01612	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
CPBIPEFG_01613	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CPBIPEFG_01614	5.57e-129	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CPBIPEFG_01615	8.61e-294	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CPBIPEFG_01616	4.74e-286	yttB	-	-	EGP	-	-	-	Major Facilitator
CPBIPEFG_01617	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CPBIPEFG_01618	3.59e-264	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
CPBIPEFG_01619	1.14e-150	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
CPBIPEFG_01620	6.08e-312	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
CPBIPEFG_01621	2.32e-169	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
CPBIPEFG_01622	6.59e-124	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CPBIPEFG_01623	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CPBIPEFG_01624	8.41e-236	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CPBIPEFG_01625	5.54e-51	-	-	-	-	-	-	-	-
CPBIPEFG_01626	2.39e-228	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CPBIPEFG_01627	1.35e-201	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CPBIPEFG_01628	3.46e-241	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
CPBIPEFG_01629	4.07e-39	-	-	-	-	-	-	-	-
CPBIPEFG_01630	9.39e-184	-	-	-	D	-	-	-	AAA domain
CPBIPEFG_01631	7.76e-218	repA	-	-	S	-	-	-	Replication initiator protein A
CPBIPEFG_01632	4.88e-59	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
CPBIPEFG_01633	7.53e-110	-	-	-	-	-	-	-	-
CPBIPEFG_01634	3.47e-54	-	-	-	-	-	-	-	-
CPBIPEFG_01635	1.39e-36	-	-	-	-	-	-	-	-
CPBIPEFG_01636	0.0	traA	-	-	L	-	-	-	MobA MobL family protein
CPBIPEFG_01637	0.0	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
CPBIPEFG_01638	3.64e-24	-	-	-	-	-	-	-	-
CPBIPEFG_01639	8.74e-142	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CPBIPEFG_01640	1.48e-72	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CPBIPEFG_01641	1.46e-110	-	-	-	FG	-	-	-	adenosine 5'-monophosphoramidase activity
CPBIPEFG_01642	1.03e-61	-	-	-	-	-	-	-	-
CPBIPEFG_01643	3.06e-97	-	-	-	L	-	-	-	Integrase
CPBIPEFG_01644	3.69e-50	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
CPBIPEFG_01645	1.1e-206	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
CPBIPEFG_01646	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CPBIPEFG_01647	3.11e-141	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CPBIPEFG_01648	2.5e-59	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CPBIPEFG_01649	1.81e-29	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CPBIPEFG_01650	1.25e-241	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
CPBIPEFG_01651	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
CPBIPEFG_01652	4.53e-240	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
CPBIPEFG_01653	6.23e-244	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
CPBIPEFG_01654	9.69e-25	-	-	-	-	-	-	-	-
CPBIPEFG_01655	3.56e-180	-	-	-	-	-	-	-	-
CPBIPEFG_01656	2.09e-286	ydaM	-	-	M	-	-	-	Glycosyl transferase family group 2
CPBIPEFG_01657	5.08e-190	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
CPBIPEFG_01658	2.94e-155	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
CPBIPEFG_01659	3.72e-201	-	-	-	L	-	-	-	HNH nucleases
CPBIPEFG_01660	2.38e-172	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_01661	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CPBIPEFG_01662	5.11e-158	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
CPBIPEFG_01663	2.78e-82	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
CPBIPEFG_01664	1.87e-158	terC	-	-	P	-	-	-	Integral membrane protein TerC family
CPBIPEFG_01665	1.48e-49	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
CPBIPEFG_01666	4.56e-33	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
CPBIPEFG_01667	1.45e-314	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CPBIPEFG_01668	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CPBIPEFG_01669	1.56e-161	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CPBIPEFG_01670	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
CPBIPEFG_01671	3.13e-230	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CPBIPEFG_01672	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CPBIPEFG_01673	1.63e-65	-	-	-	-	-	-	-	-
CPBIPEFG_01674	5.17e-30	-	-	-	-	-	-	-	-
CPBIPEFG_01675	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CPBIPEFG_01676	1.33e-289	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
CPBIPEFG_01677	1.39e-230	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
CPBIPEFG_01678	4.89e-159	-	-	-	S	-	-	-	membrane
CPBIPEFG_01679	2.15e-101	-	-	-	K	-	-	-	LytTr DNA-binding domain
CPBIPEFG_01680	4.32e-148	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CPBIPEFG_01681	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
CPBIPEFG_01682	1.47e-206	-	-	-	L	-	-	-	Transposase
CPBIPEFG_01683	1.17e-78	-	-	-	S	-	-	-	GIY-YIG catalytic domain
CPBIPEFG_01684	6.04e-203	-	-	-	V	-	-	-	ABC transporter transmembrane region
CPBIPEFG_01686	2.63e-130	tnpR	-	-	L	-	-	-	Resolvase, N terminal domain
CPBIPEFG_01687	6.56e-43	-	-	-	S	-	-	-	Phage Mu protein F like protein
CPBIPEFG_01688	5.58e-91	-	-	-	S	-	-	-	Phage Mu protein F like protein
CPBIPEFG_01689	3.62e-22	ytgB	-	-	S	-	-	-	Transglycosylase associated protein
CPBIPEFG_01691	2.29e-273	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CPBIPEFG_01692	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
CPBIPEFG_01693	1.73e-218	-	-	-	L	-	-	-	Transposase and inactivated derivatives IS30 family
CPBIPEFG_01694	5.71e-206	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_01696	8.72e-12	-	-	-	K	-	-	-	DNA-templated transcription, initiation
CPBIPEFG_01697	3.65e-16	-	-	-	K	-	-	-	DNA-templated transcription, initiation
CPBIPEFG_01698	1.1e-276	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CPBIPEFG_01699	7.22e-262	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
CPBIPEFG_01700	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
CPBIPEFG_01701	1.5e-32	-	-	-	K	-	-	-	Protein of unknown function (DUF4065)
CPBIPEFG_01702	1.63e-118	-	-	-	K	-	-	-	Protein of unknown function (DUF4065)
CPBIPEFG_01703	3.67e-227	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CPBIPEFG_01704	7.64e-62	-	-	-	-	-	-	-	-
CPBIPEFG_01705	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
CPBIPEFG_01706	5.13e-214	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
CPBIPEFG_01707	2.27e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
CPBIPEFG_01708	2.65e-246	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CPBIPEFG_01709	2.48e-41	-	-	-	I	-	-	-	Alpha/beta hydrolase family
CPBIPEFG_01710	1.53e-118	-	-	-	I	-	-	-	Alpha/beta hydrolase family
CPBIPEFG_01711	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
CPBIPEFG_01712	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CPBIPEFG_01713	1.62e-63	-	-	-	-	-	-	-	-
CPBIPEFG_01714	2.2e-68	-	-	-	-	-	-	-	-
CPBIPEFG_01715	2.44e-134	-	-	-	K	ko:K09705	-	ko00000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CPBIPEFG_01716	2.02e-09	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
CPBIPEFG_01717	5.21e-41	-	1.1.1.3	-	T	ko:K00003,ko:K07166	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	phosphoserine phosphatase activity
CPBIPEFG_01718	5.69e-185	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
CPBIPEFG_01719	3.33e-49	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
CPBIPEFG_01720	1.71e-26	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
CPBIPEFG_01721	3.5e-77	-	-	-	S	-	-	-	Alpha beta hydrolase
CPBIPEFG_01722	1.25e-119	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
CPBIPEFG_01723	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
CPBIPEFG_01725	3.89e-151	-	-	-	L	-	-	-	Integrase
CPBIPEFG_01727	2.83e-115	dpnM	2.1.1.72	-	H	ko:K06223	ko03430,map03430	ko00000,ko00001,ko01000,ko02048,ko03032,ko03400	Site-specific DNA-methyltransferase (adenine-specific)
CPBIPEFG_01728	1.24e-168	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CPBIPEFG_01729	2.88e-117	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CPBIPEFG_01732	5.2e-188	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CPBIPEFG_01733	2.02e-117	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
CPBIPEFG_01734	3.83e-227	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CPBIPEFG_01735	0.0	XK27_11280	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
CPBIPEFG_01736	1.34e-233	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CPBIPEFG_01737	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CPBIPEFG_01738	2.03e-80	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
CPBIPEFG_01739	3.86e-73	steT	-	-	E	ko:K03294	-	ko00000	amino acid
CPBIPEFG_01740	5.25e-39	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
CPBIPEFG_01741	3.9e-306	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
CPBIPEFG_01742	4.93e-264	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
CPBIPEFG_01743	4.77e-258	-	-	-	-	-	-	-	-
CPBIPEFG_01744	1.29e-123	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
CPBIPEFG_01745	1.74e-36	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
CPBIPEFG_01746	2.85e-58	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
CPBIPEFG_01747	5.45e-121	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CPBIPEFG_01748	4.99e-10	-	-	-	-	-	-	-	-
CPBIPEFG_01749	5.43e-133	-	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
CPBIPEFG_01750	8.9e-51	-	-	-	-	-	-	-	-
CPBIPEFG_01751	2.18e-236	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
CPBIPEFG_01752	8.26e-82	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_01753	3.23e-45	-	-	-	-	-	-	-	-
CPBIPEFG_01754	7.5e-308	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
CPBIPEFG_01755	3.88e-91	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
CPBIPEFG_01756	3.52e-16	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
CPBIPEFG_01757	7.23e-22	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
CPBIPEFG_01758	7.31e-75	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
CPBIPEFG_01759	1.31e-78	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
CPBIPEFG_01761	1.89e-91	-	-	-	GK	-	-	-	ROK family
CPBIPEFG_01762	7.47e-82	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
CPBIPEFG_01763	2.17e-138	-	-	-	C	-	-	-	nitroreductase
CPBIPEFG_01764	1.53e-162	-	-	-	S	-	-	-	KR domain
CPBIPEFG_01765	3.75e-122	tdh	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
CPBIPEFG_01766	2.75e-09	-	-	-	-	-	-	-	-
CPBIPEFG_01767	6.8e-130	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CPBIPEFG_01768	1.59e-74	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CPBIPEFG_01769	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
CPBIPEFG_01770	6.09e-240	flp	-	-	V	-	-	-	Beta-lactamase
CPBIPEFG_01771	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CPBIPEFG_01772	1.75e-123	-	-	-	-	-	-	-	-
CPBIPEFG_01773	2.95e-143	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
CPBIPEFG_01774	1.36e-71	-	-	-	-	-	-	-	-
CPBIPEFG_01775	2.1e-44	-	-	-	-	-	-	-	-
CPBIPEFG_01776	2.33e-103	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
CPBIPEFG_01777	5.36e-219	yobV3	-	-	K	-	-	-	WYL domain
CPBIPEFG_01778	2.4e-89	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
CPBIPEFG_01779	0.0	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
CPBIPEFG_01780	2.43e-30	adh1	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CPBIPEFG_01781	7.15e-55	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
CPBIPEFG_01782	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
CPBIPEFG_01783	1.35e-46	-	-	-	C	-	-	-	Heavy-metal-associated domain
CPBIPEFG_01784	5.57e-117	dpsB	-	-	P	-	-	-	Belongs to the Dps family
CPBIPEFG_01785	1.39e-141	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
CPBIPEFG_01786	1.72e-69	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CPBIPEFG_01787	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
CPBIPEFG_01788	4.5e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CPBIPEFG_01789	2.52e-209	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CPBIPEFG_01790	8.34e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CPBIPEFG_01791	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CPBIPEFG_01792	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
CPBIPEFG_01793	1.95e-69	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CPBIPEFG_01794	3.23e-289	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
CPBIPEFG_01795	8.23e-222	-	-	-	-	-	-	-	-
CPBIPEFG_01796	2.79e-77	lysM	-	-	M	-	-	-	LysM domain
CPBIPEFG_01798	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
CPBIPEFG_01799	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
CPBIPEFG_01800	1.58e-33	-	-	-	-	-	-	-	-
CPBIPEFG_01801	3.64e-237	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CPBIPEFG_01807	1.14e-277	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
CPBIPEFG_01808	1.28e-256	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
CPBIPEFG_01809	2.25e-222	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CPBIPEFG_01810	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CPBIPEFG_01811	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CPBIPEFG_01812	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CPBIPEFG_01813	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
CPBIPEFG_01814	1.17e-73	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CPBIPEFG_01815	4.67e-290	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CPBIPEFG_01816	2.36e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
CPBIPEFG_01817	1.64e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CPBIPEFG_01818	5.68e-174	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
CPBIPEFG_01819	1.32e-73	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CPBIPEFG_01820	1.56e-152	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
CPBIPEFG_01821	5.3e-189	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
CPBIPEFG_01822	1.15e-144	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CPBIPEFG_01823	1.85e-49	ynzC	-	-	S	-	-	-	UPF0291 protein
CPBIPEFG_01824	6.43e-41	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
CPBIPEFG_01825	7.2e-42	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_01826	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
CPBIPEFG_01827	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CPBIPEFG_01828	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
CPBIPEFG_01829	8.1e-209	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
CPBIPEFG_01830	1.61e-224	degV1	-	-	S	-	-	-	DegV family
CPBIPEFG_01831	2.99e-216	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
CPBIPEFG_01832	8.03e-41	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CPBIPEFG_01833	6.17e-95	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CPBIPEFG_01834	4.22e-71	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	lactoylglutathione lyase activity
CPBIPEFG_01835	9.99e-86	-	-	-	S	-	-	-	ASCH domain
CPBIPEFG_01836	1.05e-142	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CPBIPEFG_01837	5.82e-105	-	-	-	-	-	-	-	-
CPBIPEFG_01838	0.0	-	-	-	-	-	-	-	-
CPBIPEFG_01839	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
CPBIPEFG_01840	1.01e-168	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
CPBIPEFG_01841	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CPBIPEFG_01842	4.15e-131	-	-	-	S	-	-	-	AAA ATPase domain
CPBIPEFG_01843	1.02e-232	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CPBIPEFG_01844	9.2e-148	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
CPBIPEFG_01845	3.6e-209	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CPBIPEFG_01846	6.96e-269	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
CPBIPEFG_01847	5.22e-276	-	-	-	KQ	-	-	-	helix_turn_helix, mercury resistance
CPBIPEFG_01851	6.52e-34	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CPBIPEFG_01854	3.68e-261	-	-	-	V	-	-	-	ABC transporter transmembrane region
CPBIPEFG_01860	3.61e-13	sagB	-	-	C	-	-	-	coenzyme F420-1:gamma-L-glutamate ligase activity
CPBIPEFG_01861	3.33e-63	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
CPBIPEFG_01862	7.81e-155	-	-	-	-	-	-	-	-
CPBIPEFG_01863	6.89e-182	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
CPBIPEFG_01864	1.14e-179	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
CPBIPEFG_01865	2.86e-143	-	-	-	G	-	-	-	phosphoglycerate mutase
CPBIPEFG_01866	9.84e-123	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CPBIPEFG_01867	3.36e-230	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CPBIPEFG_01868	3.81e-151	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_01869	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CPBIPEFG_01870	9.15e-302	-	-	-	E	-	-	-	amino acid
CPBIPEFG_01871	6.39e-177	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
CPBIPEFG_01872	8.72e-313	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CPBIPEFG_01873	2.93e-299	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CPBIPEFG_01874	3.65e-156	-	-	-	-	-	-	-	-
CPBIPEFG_01875	9.86e-153	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CPBIPEFG_01876	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
CPBIPEFG_01877	1.17e-216	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CPBIPEFG_01878	6.21e-270	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CPBIPEFG_01879	1.48e-159	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CPBIPEFG_01880	1.38e-73	-	-	-	M	ko:K02004	-	ko00000,ko00002,ko02000	Membrane
CPBIPEFG_01881	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CPBIPEFG_01882	3.96e-49	-	-	-	-	-	-	-	-
CPBIPEFG_01883	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CPBIPEFG_01884	6.7e-200	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CPBIPEFG_01885	1.75e-156	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
CPBIPEFG_01886	2.66e-64	-	-	-	-	-	-	-	-
CPBIPEFG_01887	8.02e-38	-	-	-	-	-	-	-	-
CPBIPEFG_01888	7.99e-37	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CPBIPEFG_01889	1.37e-56	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CPBIPEFG_01890	1.87e-11	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CPBIPEFG_01892	2.66e-221	pbpX2	-	-	V	-	-	-	Beta-lactamase
CPBIPEFG_01893	1.05e-312	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CPBIPEFG_01894	1e-47	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CPBIPEFG_01895	2.08e-304	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
CPBIPEFG_01896	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CPBIPEFG_01897	3.2e-27	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
CPBIPEFG_01898	2.34e-66	-	-	-	-	-	-	-	-
CPBIPEFG_01899	3.66e-274	-	-	-	S	-	-	-	Membrane
CPBIPEFG_01900	1.69e-107	ykuL	-	-	S	-	-	-	(CBS) domain
CPBIPEFG_01901	0.0	cadA	-	-	P	-	-	-	P-type ATPase
CPBIPEFG_01902	1.06e-258	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
CPBIPEFG_01903	9e-66	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
CPBIPEFG_01904	1.37e-63	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
CPBIPEFG_01905	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CPBIPEFG_01906	7e-103	-	-	-	S	-	-	-	Putative adhesin
CPBIPEFG_01907	7.2e-197	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CPBIPEFG_01908	1.77e-61	-	-	-	-	-	-	-	-
CPBIPEFG_01909	2.32e-142	ackA	2.7.2.1	-	H	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CPBIPEFG_01910	1.23e-227	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
CPBIPEFG_01911	4.7e-191	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CPBIPEFG_01912	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CPBIPEFG_01913	4.68e-193	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
CPBIPEFG_01915	8.76e-80	-	-	-	L	-	-	-	RelB antitoxin
CPBIPEFG_01917	3.71e-169	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
CPBIPEFG_01918	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CPBIPEFG_01921	1.16e-21	-	-	-	C	-	-	-	nitroreductase
CPBIPEFG_01923	6.88e-34	-	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
CPBIPEFG_01924	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CPBIPEFG_01925	4.02e-204	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
CPBIPEFG_01926	2.6e-96	-	-	-	-	-	-	-	-
CPBIPEFG_01927	1.05e-112	-	-	-	-	-	-	-	-
CPBIPEFG_01928	2.37e-184	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
CPBIPEFG_01929	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CPBIPEFG_01930	3.58e-216	degS	2.7.13.3	-	F	ko:K07683,ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Sensor histidine kinase
CPBIPEFG_01931	1.52e-43	vraR	-	-	K	ko:K07694,ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
CPBIPEFG_01932	1.6e-41	vraR	-	-	K	ko:K07694,ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
CPBIPEFG_01933	2.43e-234	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CPBIPEFG_01934	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CPBIPEFG_01935	9.06e-60	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CPBIPEFG_01936	5.74e-142	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CPBIPEFG_01937	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CPBIPEFG_01938	2.56e-186	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
CPBIPEFG_01939	1.32e-34	-	-	-	-	-	-	-	-
CPBIPEFG_01940	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CPBIPEFG_01941	4.64e-53	-	-	-	S	-	-	-	Enterocin A Immunity
CPBIPEFG_01942	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CPBIPEFG_01943	1.39e-96	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
CPBIPEFG_01944	2.11e-249	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CPBIPEFG_01945	2.06e-104	dar	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
CPBIPEFG_01946	1e-92	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CPBIPEFG_01948	3.66e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CPBIPEFG_01949	1.09e-169	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CPBIPEFG_01950	1.09e-256	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CPBIPEFG_01951	1.13e-290	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CPBIPEFG_01952	3.03e-187	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CPBIPEFG_01954	5.83e-08	-	-	-	-	-	-	-	-
CPBIPEFG_01955	9.73e-69	-	-	-	-	-	-	-	-
CPBIPEFG_01957	7.6e-139	-	-	-	L	-	-	-	Integrase
CPBIPEFG_01958	2.45e-205	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
CPBIPEFG_01961	4.8e-212	-	-	-	EGP	-	-	-	Major facilitator Superfamily
CPBIPEFG_01962	2.36e-164	moeB	2.7.7.80, 2.8.1.11	-	H	ko:K21029,ko:K21147	ko04122,map04122	ko00000,ko00001,ko01000	ThiF family
CPBIPEFG_01963	4.11e-52	-	-	-	S	-	-	-	ThiS family
CPBIPEFG_01964	4.34e-198	yitS	-	-	S	-	-	-	EDD domain protein, DegV family
CPBIPEFG_01965	5.18e-109	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
CPBIPEFG_01966	2.3e-57	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CPBIPEFG_01967	1.26e-24	-	-	-	EGP	-	-	-	Major Facilitator
CPBIPEFG_01968	6.56e-114	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
CPBIPEFG_01969	5.05e-47	-	-	-	-	-	-	-	-
CPBIPEFG_01970	5.22e-136	-	-	-	-	-	-	-	-
CPBIPEFG_01971	1.18e-147	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
CPBIPEFG_01972	8.96e-122	-	-	-	-	-	-	-	-
CPBIPEFG_01973	8.02e-171	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
CPBIPEFG_01974	5.87e-256	-	-	-	M	-	-	-	Glycosyl transferases group 1
CPBIPEFG_01975	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CPBIPEFG_01976	3.85e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
CPBIPEFG_01977	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CPBIPEFG_01978	6.32e-288	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CPBIPEFG_01979	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CPBIPEFG_01980	4.89e-176	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
CPBIPEFG_01981	1.06e-110	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
CPBIPEFG_01983	2.18e-138	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
CPBIPEFG_01984	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
CPBIPEFG_01985	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CPBIPEFG_01986	2e-264	camS	-	-	S	-	-	-	sex pheromone
CPBIPEFG_01987	2.94e-66	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CPBIPEFG_01988	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CPBIPEFG_01989	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CPBIPEFG_01990	2.65e-217	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
CPBIPEFG_01991	5.08e-143	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
CPBIPEFG_01992	4.23e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CPBIPEFG_01993	3.03e-60	-	-	-	-	-	-	-	-
CPBIPEFG_01994	3.51e-308	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
CPBIPEFG_01995	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CPBIPEFG_01997	6.5e-38	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
CPBIPEFG_02000	1.04e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CPBIPEFG_02005	4.13e-313	qacA	-	-	EGP	-	-	-	Major Facilitator
CPBIPEFG_02006	1.52e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CPBIPEFG_02007	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CPBIPEFG_02008	1.25e-97	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CPBIPEFG_02009	2.51e-203	-	-	-	-	-	-	-	-
CPBIPEFG_02010	3.8e-21	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CPBIPEFG_02011	1.21e-179	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CPBIPEFG_02012	3.71e-95	-	-	-	-	-	-	-	-
CPBIPEFG_02013	2.73e-32	flaR	-	-	F	-	-	-	topology modulation protein
CPBIPEFG_02014	1.92e-140	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
CPBIPEFG_02015	8.5e-35	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CPBIPEFG_02016	1.13e-71	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CPBIPEFG_02017	2.15e-48	-	-	-	S	-	-	-	Transglycosylase associated protein
CPBIPEFG_02018	7e-114	-	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
CPBIPEFG_02019	3.85e-34	-	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
CPBIPEFG_02020	1.64e-237	-	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
CPBIPEFG_02021	8.74e-195	-	-	-	C	-	-	-	Nitroreductase
CPBIPEFG_02024	4.65e-168	-	-	-	P	ko:K01990	-	ko00000,ko00002,ko02000	ABC-type multidrug transport system ATPase component
CPBIPEFG_02025	8.78e-155	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
CPBIPEFG_02026	5.26e-38	-	-	-	-	-	-	-	-
CPBIPEFG_02027	4.67e-105	-	-	-	M	-	-	-	domain protein
CPBIPEFG_02029	7.82e-211	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CPBIPEFG_02030	7.17e-43	-	-	-	M	-	-	-	Rib/alpha-like repeat
CPBIPEFG_02031	0.0	-	-	-	S	ko:K21449	-	ko00000,ko02000	Domain of unknown function (DUF4430)
CPBIPEFG_02032	2.49e-234	-	-	-	U	-	-	-	FFAT motif binding
CPBIPEFG_02033	1.33e-152	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
CPBIPEFG_02034	2.02e-52	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
CPBIPEFG_02035	8.69e-192	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
CPBIPEFG_02036	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CPBIPEFG_02037	1.35e-135	-	-	-	S	-	-	-	SLAP domain
CPBIPEFG_02038	1.14e-123	-	-	-	-	-	-	-	-
CPBIPEFG_02039	2.84e-33	-	-	-	-	-	-	-	-
CPBIPEFG_02040	3.61e-58	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CPBIPEFG_02041	3.33e-84	-	-	-	S	-	-	-	CAAX protease self-immunity
CPBIPEFG_02042	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
CPBIPEFG_02043	7.77e-36	-	-	-	-	-	-	-	-
CPBIPEFG_02044	1.13e-21	-	-	-	-	-	-	-	-
CPBIPEFG_02045	8.68e-44	-	-	-	-	-	-	-	-
CPBIPEFG_02046	8.68e-46	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
CPBIPEFG_02047	1.95e-45	-	-	-	S	-	-	-	Enterocin A Immunity
CPBIPEFG_02048	1.7e-106	-	-	-	V	-	-	-	COG4823 Abortive infection bacteriophage resistance protein
CPBIPEFG_02049	1.34e-152	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CPBIPEFG_02050	4.99e-123	-	-	-	L	-	-	-	reverse transcriptase
CPBIPEFG_02052	7.9e-28	-	-	-	-	-	-	-	-
CPBIPEFG_02053	1.86e-165	-	-	-	I	-	-	-	Acyl-transferase
CPBIPEFG_02054	4.24e-184	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
CPBIPEFG_02055	5.08e-237	-	-	-	M	-	-	-	Glycosyl transferase family 8
CPBIPEFG_02056	1.29e-208	-	-	-	M	-	-	-	Glycosyl transferase family 8
CPBIPEFG_02057	4.4e-212	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
CPBIPEFG_02060	1.4e-179	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
CPBIPEFG_02061	2.54e-214	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
CPBIPEFG_02062	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
CPBIPEFG_02063	5.26e-173	-	-	-	-	-	-	-	-
CPBIPEFG_02064	4.04e-265	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CPBIPEFG_02065	4.75e-132	-	-	-	-	-	-	-	-
CPBIPEFG_02066	7.34e-72	-	-	-	S	-	-	-	Fic/DOC family
CPBIPEFG_02067	6.21e-53	-	-	-	S	-	-	-	Fic/DOC family
CPBIPEFG_02068	3.29e-87	-	-	-	-	-	-	-	-
CPBIPEFG_02069	2.89e-75	-	-	-	-	-	-	-	-
CPBIPEFG_02070	1.07e-294	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CPBIPEFG_02071	2.79e-276	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
CPBIPEFG_02072	1.51e-90	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
CPBIPEFG_02073	1.54e-135	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
CPBIPEFG_02074	3.58e-149	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
CPBIPEFG_02075	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
CPBIPEFG_02076	5.96e-146	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CPBIPEFG_02077	1.39e-148	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
CPBIPEFG_02078	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
CPBIPEFG_02079	6.04e-117	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
CPBIPEFG_02080	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
CPBIPEFG_02081	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
CPBIPEFG_02082	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
CPBIPEFG_02083	5.73e-210	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
CPBIPEFG_02084	1.18e-227	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
CPBIPEFG_02085	1.1e-259	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
CPBIPEFG_02086	2.7e-233	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
CPBIPEFG_02087	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
CPBIPEFG_02088	3.38e-226	-	-	-	-	-	-	-	-
CPBIPEFG_02089	9.13e-182	-	-	-	-	-	-	-	-
CPBIPEFG_02090	2.67e-136	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CPBIPEFG_02091	7.83e-38	-	-	-	-	-	-	-	-
CPBIPEFG_02092	0.0	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
CPBIPEFG_02093	3.13e-173	-	-	-	-	-	-	-	-
CPBIPEFG_02094	1.36e-179	-	-	-	-	-	-	-	-
CPBIPEFG_02095	8.47e-181	-	-	-	-	-	-	-	-
CPBIPEFG_02096	1.81e-159	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CPBIPEFG_02097	7.06e-81	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
CPBIPEFG_02098	4.94e-308	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CPBIPEFG_02099	4.9e-197	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CPBIPEFG_02100	2.49e-158	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
CPBIPEFG_02101	2.64e-88	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
CPBIPEFG_02102	1.4e-159	-	-	-	S	-	-	-	Peptidase family M23