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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
CIOPPAPO_00001	2.89e-61	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CIOPPAPO_00002	3.49e-162	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
CIOPPAPO_00003	1.14e-133	-	-	-	T	-	-	-	EAL domain
CIOPPAPO_00004	2.63e-115	-	-	-	-	-	-	-	-
CIOPPAPO_00005	8.1e-124	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
CIOPPAPO_00006	1.36e-168	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
CIOPPAPO_00007	5.38e-131	ytqB	-	-	J	-	-	-	Putative rRNA methylase
CIOPPAPO_00008	1.11e-149	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
CIOPPAPO_00009	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
CIOPPAPO_00010	1.5e-68	-	-	-	-	-	-	-	-
CIOPPAPO_00011	1.29e-158	-	-	-	P	ko:K01990	-	ko00000,ko00002,ko02000	ABC-type multidrug transport system ATPase component
CIOPPAPO_00012	7.76e-184	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
CIOPPAPO_00013	3.46e-65	-	-	-	-	-	-	-	-
CIOPPAPO_00014	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CIOPPAPO_00015	1.14e-159	-	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	pseudouridine synthase activity
CIOPPAPO_00016	2.65e-182	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CIOPPAPO_00017	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
CIOPPAPO_00018	4.36e-109	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
CIOPPAPO_00019	5.25e-258	ald	1.4.1.1	-	C	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
CIOPPAPO_00020	3.13e-308	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CIOPPAPO_00021	3.29e-73	-	-	-	S	-	-	-	Small secreted protein
CIOPPAPO_00022	2.29e-74	ytpP	-	-	CO	-	-	-	Thioredoxin
CIOPPAPO_00023	1.63e-146	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CIOPPAPO_00024	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
CIOPPAPO_00025	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
CIOPPAPO_00026	1.33e-169	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
CIOPPAPO_00027	3.47e-152	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CIOPPAPO_00028	3.59e-301	-	-	-	F	ko:K03458	-	ko00000	Permease
CIOPPAPO_00029	0.0	guaD	3.5.4.3	-	F	ko:K01487	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
CIOPPAPO_00030	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CIOPPAPO_00031	1.66e-210	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
CIOPPAPO_00032	1.7e-142	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CIOPPAPO_00033	4.94e-114	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CIOPPAPO_00034	5.44e-311	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
CIOPPAPO_00035	1.41e-213	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
CIOPPAPO_00036	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CIOPPAPO_00037	2.31e-101	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CIOPPAPO_00038	2.41e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
CIOPPAPO_00039	6.09e-72	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CIOPPAPO_00040	2.6e-134	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
CIOPPAPO_00041	9.12e-285	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
CIOPPAPO_00042	2.58e-65	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
CIOPPAPO_00043	9.14e-152	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CIOPPAPO_00044	2.87e-140	yqeK	-	-	H	-	-	-	Hydrolase, HD family
CIOPPAPO_00045	1.28e-77	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CIOPPAPO_00046	2.15e-182	yqeM	-	-	Q	-	-	-	Methyltransferase
CIOPPAPO_00047	4.79e-272	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
CIOPPAPO_00048	4.1e-124	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
CIOPPAPO_00049	4.39e-39	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
CIOPPAPO_00050	4.46e-186	-	3.1.3.23	-	S	ko:K07757	-	ko00000,ko01000	Sucrose-6F-phosphate phosphohydrolase
CIOPPAPO_00051	2.19e-67	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
CIOPPAPO_00052	4.83e-146	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
CIOPPAPO_00053	1.55e-222	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CIOPPAPO_00054	4.42e-248	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CIOPPAPO_00055	3.25e-154	csrR	-	-	K	-	-	-	response regulator
CIOPPAPO_00056	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CIOPPAPO_00057	1.66e-92	yxeA	-	-	S	-	-	-	Protein of unknown function (DUF1093)
CIOPPAPO_00058	4.32e-204	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CIOPPAPO_00059	3.93e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
CIOPPAPO_00060	5.03e-181	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CIOPPAPO_00061	2.46e-118	-	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CIOPPAPO_00062	9.91e-87	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
CIOPPAPO_00063	1.45e-258	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CIOPPAPO_00064	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CIOPPAPO_00065	1.03e-264	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CIOPPAPO_00066	2.31e-154	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
CIOPPAPO_00067	6.68e-93	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CIOPPAPO_00068	8.94e-75	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
CIOPPAPO_00069	0.0	-	-	-	S	-	-	-	membrane
CIOPPAPO_00070	9.1e-33	-	-	-	S	ko:K09779	-	ko00000	Domain of unknown function (DUF378)
CIOPPAPO_00071	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CIOPPAPO_00072	5.33e-30	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
CIOPPAPO_00073	3.67e-126	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CIOPPAPO_00074	2.79e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
CIOPPAPO_00075	9.85e-49	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
CIOPPAPO_00076	3.99e-232	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
CIOPPAPO_00077	1.11e-92	yqhL	-	-	P	-	-	-	Rhodanese-like protein
CIOPPAPO_00078	1.23e-32	WQ51_02665	-	-	S	-	-	-	Protein of unknown function (DUF3042)
CIOPPAPO_00079	2.92e-182	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
CIOPPAPO_00080	6.75e-216	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CIOPPAPO_00081	7.74e-86	glnR	-	-	K	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000,ko03000	Transcriptional regulator
CIOPPAPO_00082	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
CIOPPAPO_00083	1.11e-201	-	-	-	-	-	-	-	-
CIOPPAPO_00084	7.15e-230	-	-	-	-	-	-	-	-
CIOPPAPO_00085	3.68e-125	-	-	-	S	-	-	-	Protein conserved in bacteria
CIOPPAPO_00086	1.63e-121	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_00087	5.22e-65	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
CIOPPAPO_00088	7.92e-76	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
CIOPPAPO_00089	8.46e-65	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
CIOPPAPO_00090	1.38e-250	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CIOPPAPO_00091	5.18e-128	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CIOPPAPO_00092	8.9e-96	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
CIOPPAPO_00093	2.79e-97	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CIOPPAPO_00094	4.5e-200	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CIOPPAPO_00095	3.68e-311	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CIOPPAPO_00096	1.65e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CIOPPAPO_00097	3.46e-210	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CIOPPAPO_00098	3.41e-191	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
CIOPPAPO_00099	9.88e-100	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
CIOPPAPO_00100	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
CIOPPAPO_00101	7.65e-71	-	-	-	M	-	-	-	domain protein
CIOPPAPO_00103	1.99e-69	-	-	-	-	-	-	-	-
CIOPPAPO_00104	2.35e-134	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
CIOPPAPO_00105	2.53e-42	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CIOPPAPO_00106	8.22e-270	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CIOPPAPO_00107	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CIOPPAPO_00108	4.41e-220	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CIOPPAPO_00109	2.31e-312	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CIOPPAPO_00110	6.77e-166	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
CIOPPAPO_00111	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
CIOPPAPO_00112	4.57e-214	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CIOPPAPO_00113	1.34e-152	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
CIOPPAPO_00114	6.64e-161	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
CIOPPAPO_00115	6.59e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
CIOPPAPO_00116	1.43e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CIOPPAPO_00117	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
CIOPPAPO_00118	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CIOPPAPO_00119	1.11e-240	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CIOPPAPO_00120	9.76e-50	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CIOPPAPO_00121	5.47e-167	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CIOPPAPO_00122	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
CIOPPAPO_00123	2.75e-229	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CIOPPAPO_00124	8.53e-76	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CIOPPAPO_00125	3.49e-280	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CIOPPAPO_00126	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CIOPPAPO_00127	4.25e-270	-	-	-	S	-	-	-	associated with various cellular activities
CIOPPAPO_00128	2.09e-303	-	-	-	S	-	-	-	Putative metallopeptidase domain
CIOPPAPO_00129	4.23e-64	-	-	-	-	-	-	-	-
CIOPPAPO_00130	3.48e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
CIOPPAPO_00131	6.46e-54	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
CIOPPAPO_00132	5.09e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CIOPPAPO_00133	1.83e-182	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
CIOPPAPO_00134	2.13e-76	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CIOPPAPO_00135	9.21e-99	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
CIOPPAPO_00136	2.5e-104	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_00137	4.67e-233	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CIOPPAPO_00138	7.21e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CIOPPAPO_00139	2e-211	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
CIOPPAPO_00140	2.74e-157	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
CIOPPAPO_00141	1.6e-290	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
CIOPPAPO_00142	2.05e-94	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
CIOPPAPO_00143	1.92e-92	fabZ2	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
CIOPPAPO_00144	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
CIOPPAPO_00145	9.5e-201	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CIOPPAPO_00146	2.69e-180	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
CIOPPAPO_00147	6.05e-171	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
CIOPPAPO_00148	1.49e-181	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
CIOPPAPO_00149	1.9e-110	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
CIOPPAPO_00150	1.85e-69	-	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
CIOPPAPO_00151	3.27e-177	-	-	-	EGP	ko:K08221	-	ko00000,ko02000	transporter
CIOPPAPO_00152	1.93e-37	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
CIOPPAPO_00153	2.31e-58	entB	-	-	Q	-	-	-	Isochorismatase family
CIOPPAPO_00154	7.43e-36	entB	-	-	Q	-	-	-	Isochorismatase family
CIOPPAPO_00155	1.7e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CIOPPAPO_00156	1.95e-95	-	-	-	K	-	-	-	LytTr DNA-binding domain
CIOPPAPO_00157	3.36e-62	-	-	-	N	ko:K18843	-	ko00000,ko02048	PFAM Uncharacterised protein family UPF0150
CIOPPAPO_00158	7.27e-118	-	-	-	S	-	-	-	DJ-1/PfpI family
CIOPPAPO_00159	3.01e-42	-	-	-	S	-	-	-	YjbR
CIOPPAPO_00160	6.6e-237	-	1.1.1.90	-	C	ko:K00055	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Zn-dependent alcohol dehydrogenases, class III
CIOPPAPO_00161	1.37e-186	-	-	-	K	-	-	-	LysR substrate binding domain
CIOPPAPO_00162	1.57e-48	-	-	-	K	-	-	-	MerR, DNA binding
CIOPPAPO_00163	1.93e-29	-	-	-	C	-	-	-	Aldo/keto reductase family
CIOPPAPO_00164	1.34e-177	-	-	-	C	-	-	-	Aldo/keto reductase family
CIOPPAPO_00165	0.0	katA	1.11.1.6	-	C	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Belongs to the catalase family
CIOPPAPO_00166	6.11e-129	-	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CIOPPAPO_00167	6.6e-86	-	-	-	-	-	-	-	-
CIOPPAPO_00168	2.84e-78	npr	1.11.1.1	-	S	ko:K05910	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CIOPPAPO_00169	3.72e-46	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_00170	1.58e-177	-	-	-	K	-	-	-	Helix-turn-helix
CIOPPAPO_00171	3.28e-56	-	-	-	S	-	-	-	Alpha beta hydrolase
CIOPPAPO_00172	0.0	potE	-	-	E	-	-	-	Amino Acid
CIOPPAPO_00173	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CIOPPAPO_00174	2.96e-198	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CIOPPAPO_00175	1.22e-36	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
CIOPPAPO_00176	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CIOPPAPO_00177	6.27e-61	-	-	-	S	-	-	-	Protein of unknown function (DUF2975)
CIOPPAPO_00178	6.21e-39	yozG	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
CIOPPAPO_00179	8.75e-127	-	-	-	-	-	-	-	-
CIOPPAPO_00180	6.7e-135	-	-	-	-	-	-	-	-
CIOPPAPO_00181	7.3e-268	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
CIOPPAPO_00182	2.75e-79	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
CIOPPAPO_00183	2.47e-222	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
CIOPPAPO_00184	4.61e-84	-	-	-	-	-	-	-	-
CIOPPAPO_00185	1.01e-141	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CIOPPAPO_00186	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_00187	5.12e-132	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
CIOPPAPO_00188	4.6e-89	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CIOPPAPO_00189	3.53e-52	-	-	-	S	-	-	-	Mor transcription activator family
CIOPPAPO_00190	2.62e-55	-	-	-	S	-	-	-	Mor transcription activator family
CIOPPAPO_00191	1.5e-25	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
CIOPPAPO_00192	0.00042	-	-	-	S	-	-	-	Mor transcription activator family
CIOPPAPO_00193	5.78e-159	ybhF_2	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
CIOPPAPO_00194	8.75e-248	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
CIOPPAPO_00195	6.92e-148	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_00196	2.05e-224	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
CIOPPAPO_00197	4e-76	-	-	-	S	-	-	-	Belongs to the HesB IscA family
CIOPPAPO_00198	8.74e-247	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CIOPPAPO_00199	1.07e-50	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Major Facilitator Superfamily
CIOPPAPO_00200	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CIOPPAPO_00201	1.88e-225	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
CIOPPAPO_00202	2.36e-126	-	-	-	GM	-	-	-	Male sterility protein
CIOPPAPO_00203	9.61e-95	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CIOPPAPO_00204	2.79e-15	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
CIOPPAPO_00205	8.62e-09	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
CIOPPAPO_00206	2.29e-252	adhB	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CIOPPAPO_00207	1.88e-95	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_00208	1.35e-207	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
CIOPPAPO_00209	2.48e-86	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
CIOPPAPO_00210	2.2e-103	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
CIOPPAPO_00211	1.4e-105	-	-	-	-	-	-	-	-
CIOPPAPO_00212	9.71e-274	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
CIOPPAPO_00213	9.84e-195	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
CIOPPAPO_00214	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
CIOPPAPO_00215	6.72e-242	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
CIOPPAPO_00216	7.49e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
CIOPPAPO_00217	1.38e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
CIOPPAPO_00218	1.12e-218	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
CIOPPAPO_00219	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
CIOPPAPO_00220	1.53e-113	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
CIOPPAPO_00221	6.26e-269	aspB	2.6.1.1, 2.6.1.14	-	E	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
CIOPPAPO_00222	3.81e-159	dnaD	-	-	L	ko:K02086	-	ko00000	Replication initiation and membrane attachment
CIOPPAPO_00223	9.11e-118	yetL	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
CIOPPAPO_00224	5.4e-80	-	-	-	P	-	-	-	Rhodanese Homology Domain
CIOPPAPO_00225	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
CIOPPAPO_00226	1.36e-144	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
CIOPPAPO_00227	2.19e-135	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
CIOPPAPO_00228	7e-52	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
CIOPPAPO_00230	9.79e-280	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
CIOPPAPO_00231	6.93e-88	-	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
CIOPPAPO_00232	5.85e-309	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
CIOPPAPO_00233	1.17e-38	-	-	-	-	-	-	-	-
CIOPPAPO_00234	2.96e-109	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
CIOPPAPO_00235	2.74e-71	-	-	-	-	-	-	-	-
CIOPPAPO_00236	6.15e-161	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CIOPPAPO_00237	1.68e-109	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_00238	1.03e-143	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
CIOPPAPO_00239	1.31e-265	yurR	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	FAD dependent oxidoreductase
CIOPPAPO_00240	1.31e-89	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
CIOPPAPO_00241	1.53e-74	esbA	-	-	S	-	-	-	Family of unknown function (DUF5322)
CIOPPAPO_00242	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
CIOPPAPO_00243	3.68e-104	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CIOPPAPO_00244	3.25e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CIOPPAPO_00245	1.96e-114	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CIOPPAPO_00246	8.1e-261	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
CIOPPAPO_00247	0.0	pyrAB2	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CIOPPAPO_00248	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
CIOPPAPO_00249	2.12e-92	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_00250	3.36e-247	npp	-	-	S	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
CIOPPAPO_00251	1.28e-295	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
CIOPPAPO_00252	2.42e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
CIOPPAPO_00253	1.61e-113	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CIOPPAPO_00254	3.5e-97	gtcA	-	-	S	-	-	-	Teichoic acid glycosylation protein
CIOPPAPO_00255	2.72e-108	ysaA	-	-	V	-	-	-	VanZ like family
CIOPPAPO_00256	3.75e-119	-	-	-	V	-	-	-	VanZ like family
CIOPPAPO_00257	6.15e-151	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CIOPPAPO_00259	2.08e-22	-	-	-	-	-	-	-	-
CIOPPAPO_00260	3.15e-159	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
CIOPPAPO_00261	3.24e-158	-	-	-	Q	-	-	-	Methyltransferase domain
CIOPPAPO_00262	1.53e-150	yneD	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
CIOPPAPO_00263	8.93e-156	yneE	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_00264	7.29e-113	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_00265	1.58e-63	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CIOPPAPO_00266	3.14e-139	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
CIOPPAPO_00267	2.01e-180	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
CIOPPAPO_00268	1.62e-152	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
CIOPPAPO_00269	8.03e-122	-	-	-	GM	-	-	-	NAD(P)H-binding
CIOPPAPO_00270	2.98e-75	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
CIOPPAPO_00271	7.69e-57	-	-	-	I	-	-	-	sulfurtransferase activity
CIOPPAPO_00272	5.25e-127	-	-	-	S	-	-	-	membrane
CIOPPAPO_00273	6.36e-98	-	-	-	S	-	-	-	membrane
CIOPPAPO_00274	9.45e-84	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_00275	3.83e-257	xerS	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
CIOPPAPO_00276	3.93e-99	rppH3	-	-	F	-	-	-	NUDIX domain
CIOPPAPO_00277	1.83e-128	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CIOPPAPO_00278	1e-106	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
CIOPPAPO_00279	2.09e-125	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
CIOPPAPO_00280	7.89e-216	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
CIOPPAPO_00281	4.34e-235	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_00282	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CIOPPAPO_00283	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CIOPPAPO_00284	4.48e-137	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CIOPPAPO_00285	2.87e-213	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
CIOPPAPO_00286	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CIOPPAPO_00287	1.68e-121	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CIOPPAPO_00288	2.39e-227	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
CIOPPAPO_00289	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CIOPPAPO_00290	1.37e-214	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
CIOPPAPO_00291	1.19e-173	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CIOPPAPO_00292	9.46e-201	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CIOPPAPO_00295	2.65e-269	-	-	-	L	-	-	-	Transposase
CIOPPAPO_00296	4.43e-42	-	-	-	-	-	-	-	-
CIOPPAPO_00297	2.21e-94	-	-	-	-	-	-	-	-
CIOPPAPO_00298	1.88e-47	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
CIOPPAPO_00299	2.73e-134	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
CIOPPAPO_00300	3.56e-206	XK27_03630	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CIOPPAPO_00301	1.67e-188	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
CIOPPAPO_00302	1.06e-147	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
CIOPPAPO_00303	1.67e-115	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CIOPPAPO_00304	1.11e-239	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CIOPPAPO_00305	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_00306	1.35e-281	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
CIOPPAPO_00307	3.62e-218	ypjC	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CIOPPAPO_00308	1.18e-293	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
CIOPPAPO_00309	4.58e-54	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CIOPPAPO_00310	2.29e-315	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
CIOPPAPO_00311	5.63e-279	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
CIOPPAPO_00312	7.67e-152	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
CIOPPAPO_00313	1.51e-61	-	-	-	M	-	-	-	Lysin motif
CIOPPAPO_00314	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
CIOPPAPO_00315	2.53e-241	-	-	-	S	-	-	-	Helix-turn-helix domain
CIOPPAPO_00316	5.25e-120	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CIOPPAPO_00317	2.58e-166	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CIOPPAPO_00318	1.7e-133	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CIOPPAPO_00319	4.42e-170	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CIOPPAPO_00320	7.96e-94	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CIOPPAPO_00321	2.43e-209	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
CIOPPAPO_00322	5.14e-213	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
CIOPPAPO_00323	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
CIOPPAPO_00324	2.96e-157	tal2	2.2.1.2	-	H	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase/Fructose-6-phosphate aldolase
CIOPPAPO_00325	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
CIOPPAPO_00326	0.0	clpB	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CIOPPAPO_00327	3.57e-301	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CIOPPAPO_00328	2.94e-195	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CIOPPAPO_00329	3.96e-163	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
CIOPPAPO_00330	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
CIOPPAPO_00331	3.46e-115	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_00332	9.66e-252	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CIOPPAPO_00333	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CIOPPAPO_00334	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
CIOPPAPO_00335	2.9e-226	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
CIOPPAPO_00336	3.06e-193	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
CIOPPAPO_00337	1.04e-216	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CIOPPAPO_00338	1.12e-80	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
CIOPPAPO_00339	1.22e-112	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CIOPPAPO_00340	1.97e-230	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
CIOPPAPO_00341	2.44e-94	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
CIOPPAPO_00342	1.45e-89	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
CIOPPAPO_00343	6.29e-250	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
CIOPPAPO_00344	2.21e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
CIOPPAPO_00345	5.9e-194	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
CIOPPAPO_00346	5.79e-218	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
CIOPPAPO_00347	3.08e-308	-	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
CIOPPAPO_00348	1.84e-194	tagG	-	-	U	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport permease protein
CIOPPAPO_00349	6.73e-260	tagB	2.7.8.44	-	M	ko:K21285	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CIOPPAPO_00350	2.73e-207	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CIOPPAPO_00351	6.92e-123	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CIOPPAPO_00352	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
CIOPPAPO_00353	3.98e-314	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
CIOPPAPO_00354	9.45e-126	-	-	-	-	-	-	-	-
CIOPPAPO_00355	5.5e-203	lytH	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
CIOPPAPO_00356	3.37e-207	-	-	-	G	-	-	-	Fructosamine kinase
CIOPPAPO_00357	1.57e-149	-	-	-	S	-	-	-	HAD-hyrolase-like
CIOPPAPO_00358	4.95e-98	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CIOPPAPO_00359	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CIOPPAPO_00360	1.6e-79	-	-	-	-	-	-	-	-
CIOPPAPO_00361	2.57e-171	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
CIOPPAPO_00362	9.42e-232	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
CIOPPAPO_00363	1.79e-71	-	-	-	-	-	-	-	-
CIOPPAPO_00364	7.94e-65	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CIOPPAPO_00365	6.81e-83	-	-	-	-	-	-	-	-
CIOPPAPO_00367	4.19e-145	-	-	-	S	-	-	-	Membrane
CIOPPAPO_00368	1.55e-222	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CIOPPAPO_00369	2.65e-05	-	-	-	S	-	-	-	Short C-terminal domain
CIOPPAPO_00370	2.29e-12	-	-	-	-	-	-	-	-
CIOPPAPO_00371	3.24e-70	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CIOPPAPO_00372	3.04e-86	-	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CIOPPAPO_00373	1.71e-33	-	-	-	-	-	-	-	-
CIOPPAPO_00374	2.33e-92	-	-	-	-	-	-	-	-
CIOPPAPO_00375	9.29e-40	-	-	-	S	-	-	-	Transglycosylase associated protein
CIOPPAPO_00376	4.99e-251	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CIOPPAPO_00379	2.56e-37	-	-	-	-	-	-	-	-
CIOPPAPO_00380	4.22e-30	-	-	-	-	-	-	-	-
CIOPPAPO_00382	6.02e-13	-	-	-	-	-	-	-	-
CIOPPAPO_00385	2.93e-205	-	-	-	-	-	-	-	-
CIOPPAPO_00386	2.91e-103	-	-	-	-	-	-	-	-
CIOPPAPO_00387	1.33e-274	-	-	-	S	-	-	-	Baseplate J-like protein
CIOPPAPO_00389	5.98e-72	-	-	-	-	-	-	-	-
CIOPPAPO_00390	5.42e-262	-	-	-	-	-	-	-	-
CIOPPAPO_00391	1.33e-87	-	-	-	-	-	-	-	-
CIOPPAPO_00392	8.71e-148	-	-	-	S	-	-	-	N-acetylmuramoyl-L-alanine amidase activity
CIOPPAPO_00393	2.88e-165	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
CIOPPAPO_00394	8e-26	-	-	-	V	-	-	-	Restriction endonuclease
CIOPPAPO_00395	5.77e-68	-	-	-	S	-	-	-	EVIDENCE BY HOMOLOGY BIO14.03 Phage related functions and prophages
CIOPPAPO_00397	4.2e-79	-	-	-	-	-	-	-	-
CIOPPAPO_00398	7.06e-93	-	-	-	-	-	-	-	-
CIOPPAPO_00399	4.39e-178	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
CIOPPAPO_00400	1.86e-72	-	-	-	-	-	-	-	-
CIOPPAPO_00401	5.74e-86	-	-	-	-	-	-	-	-
CIOPPAPO_00402	1.98e-127	-	-	-	-	-	-	-	-
CIOPPAPO_00403	1.24e-68	-	-	-	S	-	-	-	Protein of unknown function (DUF4054)
CIOPPAPO_00404	7.38e-78	-	-	-	-	-	-	-	-
CIOPPAPO_00405	9.88e-206	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
CIOPPAPO_00406	2.5e-99	-	-	-	-	-	-	-	-
CIOPPAPO_00407	4.37e-218	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2213)
CIOPPAPO_00408	1.89e-05	yocH_1	-	-	M	-	-	-	3D domain
CIOPPAPO_00409	3.39e-167	-	-	-	S	-	-	-	Phage Mu protein F like protein
CIOPPAPO_00410	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF1073)
CIOPPAPO_00411	1.87e-209	-	-	-	S	-	-	-	Pfam:Terminase_3C
CIOPPAPO_00412	5.32e-138	-	-	-	S	-	-	-	DNA packaging
CIOPPAPO_00416	4.45e-45	-	-	-	-	-	-	-	-
CIOPPAPO_00419	4.46e-16	-	-	-	-	-	-	-	-
CIOPPAPO_00424	4.01e-12	-	-	-	S	-	-	-	YopX protein
CIOPPAPO_00427	3.55e-55	-	-	-	S	-	-	-	Endodeoxyribonuclease RusA
CIOPPAPO_00428	1.61e-79	-	-	-	S	-	-	-	Phage regulatory protein Rha (Phage_pRha)
CIOPPAPO_00429	2.66e-142	-	-	-	L	-	-	-	DnaD domain protein
CIOPPAPO_00430	1.09e-54	pi112	-	-	L	-	-	-	PDDEXK-like domain of unknown function (DUF3799)
CIOPPAPO_00431	1.07e-107	recT	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
CIOPPAPO_00441	0.000731	-	-	-	-	-	-	-	-
CIOPPAPO_00443	1.44e-06	-	-	-	K	-	-	-	Helix-turn-helix domain
CIOPPAPO_00444	9.27e-49	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CIOPPAPO_00445	1.53e-57	-	-	-	E	-	-	-	IrrE N-terminal-like domain
CIOPPAPO_00448	1.79e-23	-	-	-	-	-	-	-	-
CIOPPAPO_00449	3.62e-25	-	-	-	-	-	-	-	-
CIOPPAPO_00450	9.06e-46	-	-	-	-	-	-	-	-
CIOPPAPO_00451	1.78e-57	-	-	-	-	-	-	-	-
CIOPPAPO_00452	4.38e-138	-	-	-	S	-	-	-	Domain of unknown function DUF1829
CIOPPAPO_00453	3.01e-167	int7	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CIOPPAPO_00454	2.29e-12	-	-	-	-	-	-	-	-
CIOPPAPO_00455	3.24e-70	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CIOPPAPO_00456	3.04e-86	-	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CIOPPAPO_00457	1.71e-33	-	-	-	-	-	-	-	-
CIOPPAPO_00458	2.33e-92	-	-	-	-	-	-	-	-
CIOPPAPO_00459	9.29e-40	-	-	-	S	-	-	-	Transglycosylase associated protein
CIOPPAPO_00460	4.99e-251	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CIOPPAPO_00463	2.56e-37	-	-	-	-	-	-	-	-
CIOPPAPO_00464	4.22e-30	-	-	-	-	-	-	-	-
CIOPPAPO_00466	6.02e-13	-	-	-	-	-	-	-	-
CIOPPAPO_00469	2.93e-205	-	-	-	-	-	-	-	-
CIOPPAPO_00470	2.91e-103	-	-	-	-	-	-	-	-
CIOPPAPO_00471	1.33e-274	-	-	-	S	-	-	-	Baseplate J-like protein
CIOPPAPO_00473	5.98e-72	-	-	-	-	-	-	-	-
CIOPPAPO_00474	5.42e-262	-	-	-	-	-	-	-	-
CIOPPAPO_00475	1.33e-87	-	-	-	-	-	-	-	-
CIOPPAPO_00476	8.71e-148	-	-	-	S	-	-	-	N-acetylmuramoyl-L-alanine amidase activity
CIOPPAPO_00477	2.88e-165	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
CIOPPAPO_00478	8e-26	-	-	-	V	-	-	-	Restriction endonuclease
CIOPPAPO_00479	5.77e-68	-	-	-	S	-	-	-	EVIDENCE BY HOMOLOGY BIO14.03 Phage related functions and prophages
CIOPPAPO_00481	4.2e-79	-	-	-	-	-	-	-	-
CIOPPAPO_00482	7.06e-93	-	-	-	-	-	-	-	-
CIOPPAPO_00483	4.39e-178	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
CIOPPAPO_00484	1.86e-72	-	-	-	-	-	-	-	-
CIOPPAPO_00485	5.74e-86	-	-	-	-	-	-	-	-
CIOPPAPO_00486	1.98e-127	-	-	-	-	-	-	-	-
CIOPPAPO_00487	1.24e-68	-	-	-	S	-	-	-	Protein of unknown function (DUF4054)
CIOPPAPO_00488	7.38e-78	-	-	-	-	-	-	-	-
CIOPPAPO_00489	9.88e-206	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
CIOPPAPO_00490	2.5e-99	-	-	-	-	-	-	-	-
CIOPPAPO_00491	4.37e-218	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2213)
CIOPPAPO_00492	1.89e-05	yocH_1	-	-	M	-	-	-	3D domain
CIOPPAPO_00493	3.39e-167	-	-	-	S	-	-	-	Phage Mu protein F like protein
CIOPPAPO_00494	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF1073)
CIOPPAPO_00495	1.87e-209	-	-	-	S	-	-	-	Pfam:Terminase_3C
CIOPPAPO_00496	5.32e-138	-	-	-	S	-	-	-	DNA packaging
CIOPPAPO_00500	4.45e-45	-	-	-	-	-	-	-	-
CIOPPAPO_00503	4.46e-16	-	-	-	-	-	-	-	-
CIOPPAPO_00508	4.01e-12	-	-	-	S	-	-	-	YopX protein
CIOPPAPO_00511	3.55e-55	-	-	-	S	-	-	-	Endodeoxyribonuclease RusA
CIOPPAPO_00512	1.61e-79	-	-	-	S	-	-	-	Phage regulatory protein Rha (Phage_pRha)
CIOPPAPO_00513	2.66e-142	-	-	-	L	-	-	-	DnaD domain protein
CIOPPAPO_00514	1.09e-54	pi112	-	-	L	-	-	-	PDDEXK-like domain of unknown function (DUF3799)
CIOPPAPO_00515	1.07e-107	recT	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
CIOPPAPO_00525	0.000731	-	-	-	-	-	-	-	-
CIOPPAPO_00527	1.44e-06	-	-	-	K	-	-	-	Helix-turn-helix domain
CIOPPAPO_00528	9.27e-49	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CIOPPAPO_00529	1.53e-57	-	-	-	E	-	-	-	IrrE N-terminal-like domain
CIOPPAPO_00532	1.79e-23	-	-	-	-	-	-	-	-
CIOPPAPO_00533	3.62e-25	-	-	-	-	-	-	-	-
CIOPPAPO_00534	9.06e-46	-	-	-	-	-	-	-	-
CIOPPAPO_00535	1.78e-57	-	-	-	-	-	-	-	-
CIOPPAPO_00536	4.38e-138	-	-	-	S	-	-	-	Domain of unknown function DUF1829
CIOPPAPO_00537	3.01e-167	int7	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CIOPPAPO_00538	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CIOPPAPO_00539	0.0	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CIOPPAPO_00540	1.02e-46	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CIOPPAPO_00541	8.72e-301	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
CIOPPAPO_00542	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CIOPPAPO_00543	4.77e-24	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
CIOPPAPO_00544	4.04e-248	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CIOPPAPO_00545	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
CIOPPAPO_00546	2.51e-123	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CIOPPAPO_00547	8.18e-243	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CIOPPAPO_00548	1.02e-230	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
CIOPPAPO_00549	2.1e-217	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CIOPPAPO_00550	1.77e-74	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CIOPPAPO_00551	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CIOPPAPO_00552	4.88e-60	ylxQ	-	-	J	-	-	-	ribosomal protein
CIOPPAPO_00553	2.64e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
CIOPPAPO_00554	2.39e-247	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
CIOPPAPO_00555	3.03e-106	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
CIOPPAPO_00556	4.41e-52	-	-	-	-	-	-	-	-
CIOPPAPO_00557	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CIOPPAPO_00558	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CIOPPAPO_00559	8.39e-297	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
CIOPPAPO_00560	1.13e-176	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
CIOPPAPO_00561	1.2e-191	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CIOPPAPO_00562	3.42e-97	-	-	-	-	-	-	-	-
CIOPPAPO_00563	1.64e-110	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CIOPPAPO_00564	2.12e-165	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
CIOPPAPO_00565	2.79e-197	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CIOPPAPO_00566	9.38e-187	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
CIOPPAPO_00567	3.29e-173	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
CIOPPAPO_00568	1.51e-236	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CIOPPAPO_00569	6.07e-58	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
CIOPPAPO_00570	5.88e-176	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
CIOPPAPO_00571	2.42e-153	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
CIOPPAPO_00572	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CIOPPAPO_00573	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CIOPPAPO_00574	1.61e-44	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
CIOPPAPO_00575	2.61e-49	ynzC	-	-	S	-	-	-	UPF0291 protein
CIOPPAPO_00576	2.41e-142	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CIOPPAPO_00577	3.7e-177	-	-	-	L	-	-	-	Transposase
CIOPPAPO_00578	3.35e-113	-	-	-	-	-	-	-	-
CIOPPAPO_00579	1.66e-100	-	-	-	F	-	-	-	nucleoside 2-deoxyribosyltransferase
CIOPPAPO_00580	2.04e-176	-	-	-	L	-	-	-	Transposase
CIOPPAPO_00581	4.99e-273	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
CIOPPAPO_00582	1.41e-210	-	-	-	S	-	-	-	Polyphosphate nucleotide phosphotransferase, PPK2 family
CIOPPAPO_00583	1.15e-159	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
CIOPPAPO_00584	7.21e-35	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
CIOPPAPO_00585	8.41e-107	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
CIOPPAPO_00589	3.1e-109	-	-	-	M	-	-	-	hydrolase, family 25
CIOPPAPO_00590	2.01e-53	-	-	-	-	-	-	-	-
CIOPPAPO_00592	2.44e-28	-	-	-	-	-	-	-	-
CIOPPAPO_00593	1.52e-159	-	-	-	-	-	-	-	-
CIOPPAPO_00596	0.0	-	-	-	S	-	-	-	Phage minor structural protein
CIOPPAPO_00597	5.38e-189	-	-	-	S	-	-	-	Phage tail protein
CIOPPAPO_00598	6.16e-130	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
CIOPPAPO_00599	4.1e-260	-	-	-	S	-	-	-	peptidoglycan catabolic process
CIOPPAPO_00600	1.83e-07	-	-	-	S	-	-	-	Phage tail assembly chaperone proteins, TAC
CIOPPAPO_00601	9.13e-23	-	-	-	S	-	-	-	Phage tail tube protein
CIOPPAPO_00603	3.8e-36	-	-	-	-	-	-	-	-
CIOPPAPO_00604	5.87e-38	-	-	-	S	-	-	-	Phage head-tail joining protein
CIOPPAPO_00605	2.85e-29	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
CIOPPAPO_00606	1.67e-238	-	-	-	S	-	-	-	Phage capsid family
CIOPPAPO_00607	3.98e-107	-	-	-	S	-	-	-	Clp protease
CIOPPAPO_00608	2.53e-230	-	-	-	S	-	-	-	Phage portal protein
CIOPPAPO_00609	4.6e-22	-	-	-	S	-	-	-	Protein of unknown function (DUF1056)
CIOPPAPO_00610	0.0	-	-	-	S	-	-	-	Phage Terminase
CIOPPAPO_00611	9.92e-79	-	-	-	S	-	-	-	Phage Terminase
CIOPPAPO_00612	2.33e-103	-	-	-	L	-	-	-	Phage terminase, small subunit
CIOPPAPO_00614	4.31e-101	-	-	-	L	-	-	-	HNH nucleases
CIOPPAPO_00616	6.25e-245	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CIOPPAPO_00617	4.53e-15	-	-	-	-	-	-	-	-
CIOPPAPO_00618	3.07e-49	-	-	-	-	-	-	-	-
CIOPPAPO_00619	8.33e-36	-	-	-	-	-	-	-	-
CIOPPAPO_00621	8.08e-100	-	-	-	S	-	-	-	Protein of unknown function (DUF1064)
CIOPPAPO_00623	1.15e-30	-	-	-	S	-	-	-	Protein of unknwon function (DUF3310)
CIOPPAPO_00625	7.88e-197	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	DnaB-like helicase C terminal domain
CIOPPAPO_00626	1.08e-74	-	-	-	L	-	-	-	Conserved phage C-terminus (Phg_2220_C)
CIOPPAPO_00627	4.59e-107	-	-	-	S	-	-	-	Protein of unknown function (DUF669)
CIOPPAPO_00628	7.64e-173	-	-	-	L	-	-	-	AAA domain
CIOPPAPO_00629	2.01e-157	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
CIOPPAPO_00635	6.7e-124	-	-	-	S	-	-	-	DNA binding
CIOPPAPO_00637	1.8e-17	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CIOPPAPO_00639	7.15e-50	dinG	2.7.7.7, 3.6.4.12	-	L	ko:K02342,ko:K03722,ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA-directed DNA polymerase activity
CIOPPAPO_00641	3.44e-56	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CIOPPAPO_00644	3.96e-79	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CIOPPAPO_00646	3.36e-91	-	-	-	S	-	-	-	TIR domain
CIOPPAPO_00647	4.03e-207	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
CIOPPAPO_00648	6.63e-95	-	-	-	-	-	-	-	-
CIOPPAPO_00649	6.11e-11	-	-	-	K	-	-	-	CsbD-like
CIOPPAPO_00650	1.46e-101	-	-	-	T	-	-	-	Universal stress protein family
CIOPPAPO_00651	3.06e-120	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CIOPPAPO_00652	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
CIOPPAPO_00653	2.99e-70	yrvD	-	-	S	-	-	-	Pfam:DUF1049
CIOPPAPO_00654	1.14e-228	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
CIOPPAPO_00656	5.89e-157	-	-	-	-	-	-	-	-
CIOPPAPO_00657	1.39e-314	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CIOPPAPO_00658	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CIOPPAPO_00659	1.21e-22	-	-	-	-	-	-	-	-
CIOPPAPO_00660	4.51e-69	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
CIOPPAPO_00661	3.22e-141	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
CIOPPAPO_00662	5.91e-298	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CIOPPAPO_00663	2.94e-298	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CIOPPAPO_00664	9.55e-286	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CIOPPAPO_00665	5.1e-212	-	-	-	S	-	-	-	Tetratricopeptide repeat
CIOPPAPO_00666	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CIOPPAPO_00667	2.9e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CIOPPAPO_00668	8e-45	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
CIOPPAPO_00669	1.63e-236	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
CIOPPAPO_00670	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
CIOPPAPO_00671	7.41e-117	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
CIOPPAPO_00672	2.03e-154	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
CIOPPAPO_00673	9.31e-251	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
CIOPPAPO_00674	1.43e-106	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CIOPPAPO_00675	1.6e-127	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
CIOPPAPO_00676	2.3e-58	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
CIOPPAPO_00677	3.1e-269	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
CIOPPAPO_00678	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
CIOPPAPO_00679	4.46e-183	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
CIOPPAPO_00680	7.2e-61	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
CIOPPAPO_00681	2.72e-208	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	L-malate dehydrogenase activity
CIOPPAPO_00682	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
CIOPPAPO_00683	9.08e-283	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
CIOPPAPO_00684	1.15e-232	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
CIOPPAPO_00685	4.77e-271	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
CIOPPAPO_00686	9.7e-133	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CIOPPAPO_00687	5.31e-104	-	-	-	-	-	-	-	-
CIOPPAPO_00688	9.82e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
CIOPPAPO_00689	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CIOPPAPO_00690	2.33e-238	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic
CIOPPAPO_00691	6.66e-39	-	-	-	-	-	-	-	-
CIOPPAPO_00692	1.53e-210	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
CIOPPAPO_00693	4.06e-220	ypuA	-	-	S	-	-	-	Protein of unknown function (DUF1002)
CIOPPAPO_00694	4.96e-217	ykfC	3.4.14.13	-	M	ko:K20742	-	ko00000,ko01000,ko01002	NlpC/P60 family
CIOPPAPO_00695	0.0	tkt2	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CIOPPAPO_00696	5.05e-206	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CIOPPAPO_00697	3.82e-235	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
CIOPPAPO_00698	2.25e-241	yghZ	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
CIOPPAPO_00699	3.97e-201	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CIOPPAPO_00700	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CIOPPAPO_00701	0.0	nylA	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
CIOPPAPO_00702	1.15e-204	yckB	-	-	ET	ko:K02030,ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
CIOPPAPO_00703	6.33e-157	yckA	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CIOPPAPO_00704	3.99e-165	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
CIOPPAPO_00705	4.45e-227	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CIOPPAPO_00706	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
CIOPPAPO_00707	3.26e-153	-	-	-	S	-	-	-	repeat protein
CIOPPAPO_00708	5.26e-155	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
CIOPPAPO_00709	8.97e-283	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CIOPPAPO_00710	1.79e-77	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
CIOPPAPO_00711	1.17e-287	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CIOPPAPO_00712	2.13e-160	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CIOPPAPO_00713	3.07e-44	-	-	-	-	-	-	-	-
CIOPPAPO_00714	2.49e-123	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
CIOPPAPO_00715	4.08e-47	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
CIOPPAPO_00716	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CIOPPAPO_00717	1.95e-128	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
CIOPPAPO_00718	2.81e-184	ylmH	-	-	S	-	-	-	S4 domain protein
CIOPPAPO_00719	3.42e-55	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
CIOPPAPO_00720	2.58e-98	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CIOPPAPO_00721	6.01e-287	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CIOPPAPO_00722	7.41e-311	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CIOPPAPO_00723	1.9e-197	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
CIOPPAPO_00724	1.55e-252	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CIOPPAPO_00725	7.89e-316	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CIOPPAPO_00726	5.07e-235	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CIOPPAPO_00727	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CIOPPAPO_00728	3e-80	ftsL	-	-	D	-	-	-	Cell division protein FtsL
CIOPPAPO_00729	1.18e-224	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CIOPPAPO_00730	1.38e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
CIOPPAPO_00731	8.72e-80	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
CIOPPAPO_00732	4.92e-18	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
CIOPPAPO_00733	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
CIOPPAPO_00734	1.41e-124	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CIOPPAPO_00735	2.08e-203	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
CIOPPAPO_00736	3.04e-261	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
CIOPPAPO_00737	3.56e-137	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
CIOPPAPO_00739	3.45e-69	-	-	-	N	-	-	-	Cell shape-determining protein MreB
CIOPPAPO_00740	1.75e-304	tagE3	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
CIOPPAPO_00741	4.21e-252	tagE2	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
CIOPPAPO_00742	8.22e-197	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
CIOPPAPO_00743	6.68e-116	-	-	-	S	-	-	-	acetyltransferase, isoleucine patch superfamily
CIOPPAPO_00744	6.82e-100	-	-	-	S	-	-	-	acetyltransferase, isoleucine patch superfamily
CIOPPAPO_00746	1.42e-203	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
CIOPPAPO_00747	1.01e-16	-	-	-	-	-	-	-	-
CIOPPAPO_00748	3.68e-198	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
CIOPPAPO_00749	1.85e-189	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
CIOPPAPO_00750	2.12e-57	-	-	-	N	-	-	-	Cell shape-determining protein MreB
CIOPPAPO_00751	7.1e-223	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CIOPPAPO_00752	1.29e-193	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CIOPPAPO_00753	9.43e-154	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
CIOPPAPO_00754	1.63e-146	yjbH	-	-	Q	-	-	-	Thioredoxin
CIOPPAPO_00755	3.19e-204	degV1	-	-	S	-	-	-	DegV family
CIOPPAPO_00756	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
CIOPPAPO_00757	2.26e-245	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
CIOPPAPO_00758	9.14e-159	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CIOPPAPO_00759	3.17e-192	ytmP	-	-	M	-	-	-	Choline/ethanolamine kinase
CIOPPAPO_00760	1.44e-277	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
CIOPPAPO_00761	3.27e-171	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_00762	4.35e-108	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
CIOPPAPO_00763	1.36e-62	-	-	-	-	-	-	-	-
CIOPPAPO_00764	8.85e-195	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CIOPPAPO_00765	8.11e-237	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
CIOPPAPO_00766	0.0	yhaN	-	-	L	-	-	-	AAA domain
CIOPPAPO_00767	2.76e-289	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
CIOPPAPO_00768	2.85e-70	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
CIOPPAPO_00769	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
CIOPPAPO_00770	3.41e-102	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
CIOPPAPO_00771	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
CIOPPAPO_00773	3.49e-24	-	-	-	-	-	-	-	-
CIOPPAPO_00774	2.53e-304	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
CIOPPAPO_00775	4.86e-124	ywjB	-	-	H	-	-	-	RibD C-terminal domain
CIOPPAPO_00776	1.53e-69	-	-	-	S	-	-	-	Protein of unknown function (DUF1516)
CIOPPAPO_00777	5.24e-169	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
CIOPPAPO_00778	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
CIOPPAPO_00779	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
CIOPPAPO_00780	8.91e-154	rcfA	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
CIOPPAPO_00781	0.0	-	-	-	E	-	-	-	Peptidase family C69
CIOPPAPO_00782	1.18e-50	-	-	-	-	-	-	-	-
CIOPPAPO_00783	0.0	-	-	-	-	-	-	-	-
CIOPPAPO_00786	0.0	-	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	ABC transporter
CIOPPAPO_00788	4.08e-62	-	-	-	-	-	-	-	-
CIOPPAPO_00789	1.44e-121	-	-	-	V	-	-	-	VanZ like family
CIOPPAPO_00790	2.39e-108	ohrR	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_00791	8.69e-158	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CIOPPAPO_00792	8.5e-48	-	-	-	-	-	-	-	-
CIOPPAPO_00793	1.09e-223	-	1.1.1.26	-	CH	ko:K00015	ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CIOPPAPO_00794	0.0	trePP	2.4.1.216, 2.4.1.8	GH65	G	ko:K00691,ko:K03731	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65 central catalytic domain
CIOPPAPO_00795	1.44e-150	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
CIOPPAPO_00796	1.83e-183	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CIOPPAPO_00797	1.03e-155	dgk2	-	-	F	-	-	-	Deoxynucleoside kinase
CIOPPAPO_00798	1.39e-74	XK27_08430	-	-	S	-	-	-	Staphylococcal protein of unknown function (DUF960)
CIOPPAPO_00799	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
CIOPPAPO_00800	3.39e-274	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CIOPPAPO_00801	2.76e-138	-	-	-	-	-	-	-	-
CIOPPAPO_00802	1.64e-61	-	-	-	-	-	-	-	-
CIOPPAPO_00803	1.58e-119	-	-	-	-	-	-	-	-
CIOPPAPO_00804	5.72e-69	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
CIOPPAPO_00805	2.74e-108	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
CIOPPAPO_00820	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CIOPPAPO_00821	3.96e-49	ykuJ	-	-	S	-	-	-	Protein of unknown function (DUF1797)
CIOPPAPO_00822	9.06e-235	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CIOPPAPO_00823	2.99e-247	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
CIOPPAPO_00824	5.74e-285	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
CIOPPAPO_00825	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CIOPPAPO_00826	2.6e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
CIOPPAPO_00827	2.24e-41	-	-	-	-	-	-	-	-
CIOPPAPO_00828	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
CIOPPAPO_00829	4.37e-262	-	-	-	G	-	-	-	MucBP domain
CIOPPAPO_00830	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
CIOPPAPO_00831	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CIOPPAPO_00832	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
CIOPPAPO_00833	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
CIOPPAPO_00834	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CIOPPAPO_00835	2.45e-115	-	-	-	-	-	-	-	-
CIOPPAPO_00836	0.0	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
CIOPPAPO_00837	1.27e-193	-	-	-	-	-	-	-	-
CIOPPAPO_00838	2.51e-98	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
CIOPPAPO_00839	5.37e-252	yueF	-	-	S	-	-	-	AI-2E family transporter
CIOPPAPO_00840	1.5e-140	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
CIOPPAPO_00841	2.15e-52	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
CIOPPAPO_00842	1.97e-276	pbpX2	-	-	V	-	-	-	Beta-lactamase
CIOPPAPO_00843	1.88e-181	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
CIOPPAPO_00844	2.17e-102	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
CIOPPAPO_00845	1.56e-203	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
CIOPPAPO_00846	1.51e-200	-	-	-	S	-	-	-	Nuclease-related domain
CIOPPAPO_00847	1.53e-265	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
CIOPPAPO_00848	5.36e-203	csbB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Glycosyltransferase like family 2
CIOPPAPO_00849	1.09e-175	-	-	-	L	-	-	-	Transposase
CIOPPAPO_00850	2.22e-296	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
CIOPPAPO_00851	3.2e-100	-	-	-	T	-	-	-	Universal stress protein family
CIOPPAPO_00853	1.27e-290	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
CIOPPAPO_00854	2.34e-241	mocA	-	-	S	-	-	-	Oxidoreductase
CIOPPAPO_00855	2.89e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
CIOPPAPO_00856	1.14e-180	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CIOPPAPO_00857	4.62e-192	gntR	-	-	K	-	-	-	rpiR family
CIOPPAPO_00858	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
CIOPPAPO_00859	1.8e-291	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
CIOPPAPO_00860	4.23e-304	-	-	-	E	ko:K03294	-	ko00000	amino acid
CIOPPAPO_00861	0.0	fucP	-	-	G	ko:K02429	-	ko00000,ko02000	Major Facilitator Superfamily
CIOPPAPO_00862	5.83e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
CIOPPAPO_00863	0.0	gshA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
CIOPPAPO_00864	1.27e-306	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
CIOPPAPO_00865	8.25e-221	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	sugar-binding domain protein
CIOPPAPO_00866	7.14e-166	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
CIOPPAPO_00867	2.68e-296	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CIOPPAPO_00868	1.74e-154	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CIOPPAPO_00869	1.27e-50	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CIOPPAPO_00870	3.68e-77	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CIOPPAPO_00871	9.39e-184	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Pfam:Y_phosphatase3C
CIOPPAPO_00872	1.26e-246	namA	-	-	C	-	-	-	Oxidoreductase
CIOPPAPO_00873	2.96e-72	-	-	-	E	ko:K04031	-	ko00000	BMC
CIOPPAPO_00874	4.69e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CIOPPAPO_00875	3.1e-268	pduQ	-	-	C	ko:K13921	ko00640,map00640	ko00000,ko00001	Iron-containing alcohol dehydrogenase
CIOPPAPO_00876	0.0	pduP	1.2.1.87	-	C	ko:K13922	ko00640,map00640	ko00000,ko00001,ko01000	Aldehyde dehydrogenase family
CIOPPAPO_00877	2.89e-105	pduO	-	-	S	-	-	-	Haem-degrading
CIOPPAPO_00878	7.33e-135	-	-	-	S	-	-	-	Cobalamin adenosyltransferase
CIOPPAPO_00879	1.27e-55	pduN	-	-	CQ	ko:K04028	-	ko00000	Ethanolamine utilisation protein EutN/carboxysome
CIOPPAPO_00880	1.57e-118	-	-	-	S	-	-	-	Putative propanediol utilisation
CIOPPAPO_00881	4.18e-147	pduL	2.3.1.222	-	Q	ko:K13923	ko00640,map00640	ko00000,ko00001,ko01000	Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate
CIOPPAPO_00882	3.38e-56	pduJ	-	-	CQ	-	-	-	BMC
CIOPPAPO_00883	4.6e-108	-	-	-	CQ	-	-	-	BMC
CIOPPAPO_00884	9.81e-77	pduH	-	-	S	-	-	-	Dehydratase medium subunit
CIOPPAPO_00885	0.0	pduG	-	-	D	-	-	-	Diol dehydratase reactivase ATPase-like domain
CIOPPAPO_00886	7.77e-120	pduE	4.2.1.28	-	Q	ko:K13920	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase small subunit
CIOPPAPO_00887	3.39e-166	pduD	4.2.1.28	-	Q	ko:K13919	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase medium subunit
CIOPPAPO_00888	0.0	pduC	4.2.1.28	-	Q	ko:K01699	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase large subunit
CIOPPAPO_00889	6.34e-166	pduB	-	-	E	-	-	-	BMC
CIOPPAPO_00890	1.47e-55	-	-	-	CQ	-	-	-	BMC
CIOPPAPO_00891	1.71e-264	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CIOPPAPO_00892	7.75e-170	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
CIOPPAPO_00893	4.78e-56	eutP	-	-	E	ko:K04029	-	ko00000	Ethanolamine utilisation - propanediol utilisation
CIOPPAPO_00894	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CIOPPAPO_00895	1.76e-234	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
CIOPPAPO_00896	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CIOPPAPO_00897	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CIOPPAPO_00898	4.8e-66	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CIOPPAPO_00899	1.33e-257	camS	-	-	S	-	-	-	sex pheromone
CIOPPAPO_00900	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CIOPPAPO_00901	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
CIOPPAPO_00902	1.74e-274	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CIOPPAPO_00903	2.26e-129	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CIOPPAPO_00904	9.11e-207	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
CIOPPAPO_00905	4.11e-226	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CIOPPAPO_00906	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CIOPPAPO_00907	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
CIOPPAPO_00908	6.5e-224	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
CIOPPAPO_00909	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
CIOPPAPO_00910	2.8e-228	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CIOPPAPO_00911	2.56e-183	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
CIOPPAPO_00912	4.57e-171	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CIOPPAPO_00913	2.71e-56	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
CIOPPAPO_00914	2.18e-213	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
CIOPPAPO_00915	8.72e-211	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
CIOPPAPO_00916	3.02e-54	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CIOPPAPO_00917	3.03e-90	cps3B	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase like family 2
CIOPPAPO_00918	2.87e-92	XK27_01805	-	-	M	-	-	-	Glycosyltransferase like family 2
CIOPPAPO_00919	2.62e-84	-	-	-	M	-	-	-	Glycosyl transferase 4-like
CIOPPAPO_00920	4.07e-109	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
CIOPPAPO_00921	7.89e-177	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
CIOPPAPO_00922	4.37e-166	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
CIOPPAPO_00923	6.91e-120	epsB	-	-	M	-	-	-	biosynthesis protein
CIOPPAPO_00924	1.1e-210	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CIOPPAPO_00925	3.61e-243	lplL	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Bacterial lipoate protein ligase C-terminus
CIOPPAPO_00926	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
CIOPPAPO_00927	7.66e-252	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
CIOPPAPO_00928	2.3e-150	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
CIOPPAPO_00929	8.55e-305	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
CIOPPAPO_00930	1.21e-246	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
CIOPPAPO_00931	3.52e-83	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
CIOPPAPO_00932	6.51e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CIOPPAPO_00933	1.71e-197	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CIOPPAPO_00934	2.79e-183	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CIOPPAPO_00935	3.08e-208	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CIOPPAPO_00936	3.28e-193	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CIOPPAPO_00937	6.64e-82	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
CIOPPAPO_00938	2.1e-219	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CIOPPAPO_00939	6.34e-81	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CIOPPAPO_00940	2.37e-79	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CIOPPAPO_00941	2.92e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CIOPPAPO_00942	5.07e-158	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CIOPPAPO_00943	1.66e-304	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CIOPPAPO_00944	1.67e-90	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CIOPPAPO_00945	1.2e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
CIOPPAPO_00946	3.46e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CIOPPAPO_00947	8.69e-76	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CIOPPAPO_00948	1.76e-122	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CIOPPAPO_00949	3.78e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CIOPPAPO_00950	3.53e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CIOPPAPO_00951	4.1e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CIOPPAPO_00952	1.04e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CIOPPAPO_00953	3.69e-54	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CIOPPAPO_00954	3.87e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
CIOPPAPO_00955	3.95e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CIOPPAPO_00956	1.63e-154	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CIOPPAPO_00957	9.77e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CIOPPAPO_00958	7.56e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CIOPPAPO_00959	1.63e-199	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CIOPPAPO_00960	4.65e-58	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CIOPPAPO_00961	5.45e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
CIOPPAPO_00962	1.19e-150	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CIOPPAPO_00963	4.46e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
CIOPPAPO_00964	1.61e-216	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
CIOPPAPO_00965	6.41e-50	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
CIOPPAPO_00966	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CIOPPAPO_00967	5.89e-108	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CIOPPAPO_00968	1.46e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CIOPPAPO_00969	3.3e-152	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
CIOPPAPO_00970	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CIOPPAPO_00971	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CIOPPAPO_00972	7.48e-133	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_00973	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CIOPPAPO_00974	2.31e-100	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
CIOPPAPO_00983	1.97e-278	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CIOPPAPO_00984	2.42e-147	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
CIOPPAPO_00985	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
CIOPPAPO_00987	5.08e-169	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CIOPPAPO_00988	2.3e-151	-	-	-	I	-	-	-	phosphatase
CIOPPAPO_00989	2.63e-94	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
CIOPPAPO_00990	1.65e-164	-	-	-	S	-	-	-	Putative threonine/serine exporter
CIOPPAPO_00991	1.46e-155	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
CIOPPAPO_00992	4.51e-205	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
CIOPPAPO_00993	8.61e-132	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CIOPPAPO_00994	3.79e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
CIOPPAPO_00995	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
CIOPPAPO_00996	2.07e-152	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
CIOPPAPO_00997	5.16e-50	-	-	-	K	-	-	-	MerR HTH family regulatory protein
CIOPPAPO_00998	3.23e-137	azlC	-	-	E	-	-	-	branched-chain amino acid
CIOPPAPO_00999	1.33e-64	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
CIOPPAPO_01000	2.06e-297	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
CIOPPAPO_01001	4.5e-280	-	-	-	EGP	-	-	-	Transmembrane secretion effector
CIOPPAPO_01002	2.88e-92	-	-	-	-	-	-	-	-
CIOPPAPO_01003	1.99e-116	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CIOPPAPO_01004	5.14e-137	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
CIOPPAPO_01005	4.62e-178	yejC	-	-	S	-	-	-	Protein of unknown function (DUF1003)
CIOPPAPO_01006	2.64e-211	yjbO	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CIOPPAPO_01007	3.34e-67	-	-	-	S	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	Glycine cleavage H-protein
CIOPPAPO_01010	7.22e-115	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
CIOPPAPO_01011	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
CIOPPAPO_01012	5.47e-178	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
CIOPPAPO_01013	0.0	araB	2.7.1.16	-	G	ko:K00853	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	carbohydrate kinase FGGY
CIOPPAPO_01014	0.0	araP	-	-	U	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
CIOPPAPO_01015	5.25e-249	araR	-	-	K	ko:K02103	-	ko00000,ko03000	Transcriptional regulator
CIOPPAPO_01016	5.53e-117	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
CIOPPAPO_01017	5.56e-214	-	-	-	K	-	-	-	transcriptional regulator, ArsR family
CIOPPAPO_01018	3.37e-255	abf	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
CIOPPAPO_01019	3.74e-302	lacY	-	-	G	ko:K02532	-	ko00000,ko02000	Oligosaccharide H symporter
CIOPPAPO_01020	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
CIOPPAPO_01021	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
CIOPPAPO_01022	1.5e-91	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_01023	3.71e-119	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
CIOPPAPO_01024	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CIOPPAPO_01025	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
CIOPPAPO_01026	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
CIOPPAPO_01027	7.34e-95	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CIOPPAPO_01028	0.0	rafA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
CIOPPAPO_01029	1.9e-92	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CIOPPAPO_01030	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
CIOPPAPO_01031	1.53e-132	-	-	-	K	-	-	-	acetyltransferase
CIOPPAPO_01032	4.81e-225	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
CIOPPAPO_01033	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
CIOPPAPO_01034	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
CIOPPAPO_01035	3.18e-155	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
CIOPPAPO_01036	3.27e-229	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CIOPPAPO_01037	5.9e-258	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CIOPPAPO_01038	1.29e-237	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CIOPPAPO_01039	7.11e-203	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CIOPPAPO_01040	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CIOPPAPO_01041	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CIOPPAPO_01042	2.4e-296	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CIOPPAPO_01043	4.59e-140	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CIOPPAPO_01044	1.5e-142	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CIOPPAPO_01045	4.49e-195	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CIOPPAPO_01046	8.35e-175	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_01047	5.36e-219	-	-	-	-	-	-	-	-
CIOPPAPO_01048	4.52e-47	-	3.2.1.14	GH18	-	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	-
CIOPPAPO_01049	7.52e-109	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
CIOPPAPO_01050	9.16e-98	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
CIOPPAPO_01051	1.39e-96	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
CIOPPAPO_01052	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
CIOPPAPO_01053	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
CIOPPAPO_01054	9.02e-228	-	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CIOPPAPO_01056	4.19e-113	yciB	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
CIOPPAPO_01057	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
CIOPPAPO_01058	3.7e-88	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CIOPPAPO_01059	8.36e-162	XK27_07075	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CIOPPAPO_01060	9.34e-155	-	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CIOPPAPO_01061	8.13e-215	WQ51_06230	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CIOPPAPO_01062	3.31e-214	XK27_00670	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
CIOPPAPO_01063	2.08e-209	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CIOPPAPO_01064	9.71e-228	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
CIOPPAPO_01065	2.56e-196	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CIOPPAPO_01066	9.33e-177	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_01068	3.44e-204	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
CIOPPAPO_01069	3.47e-164	-	-	-	P	-	-	-	integral membrane protein, YkoY family
CIOPPAPO_01070	1.18e-309	-	3.4.16.4	-	V	ko:K01286	-	ko00000,ko01000	SH3-like domain
CIOPPAPO_01071	2.94e-142	acmA	-	-	NU	-	-	-	mannosyl-glycoprotein
CIOPPAPO_01072	2.71e-233	-	-	-	S	-	-	-	DUF218 domain
CIOPPAPO_01073	1.16e-241	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CIOPPAPO_01074	1.13e-171	-	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
CIOPPAPO_01076	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
CIOPPAPO_01077	0.0	ydiC1	-	-	EGP	-	-	-	Major Facilitator
CIOPPAPO_01078	1.05e-114	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
CIOPPAPO_01079	2.66e-292	melB	-	-	G	-	-	-	symporter
CIOPPAPO_01080	1.09e-11	-	-	-	-	-	-	-	-
CIOPPAPO_01081	0.0	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Glycosyl hydrolases family 31
CIOPPAPO_01082	5.98e-43	yisR1	3.2.1.23	-	K	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	helix_turn_helix, arabinose operon control protein
CIOPPAPO_01083	1.39e-48	yisR1	3.2.1.23	-	K	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	helix_turn_helix, arabinose operon control protein
CIOPPAPO_01084	1.97e-106	-	-	-	K	-	-	-	MerR family regulatory protein
CIOPPAPO_01085	2.64e-86	lytE	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family
CIOPPAPO_01086	2.58e-98	yyaT	-	-	K	ko:K02348	-	ko00000	protein acetylation
CIOPPAPO_01087	4.5e-157	pgm3	-	-	G	-	-	-	phosphoglycerate mutase family
CIOPPAPO_01088	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CIOPPAPO_01089	1.83e-232	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
CIOPPAPO_01090	6.64e-184	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CIOPPAPO_01091	2.86e-244	-	-	-	S	-	-	-	Protease prsW family
CIOPPAPO_01092	1.06e-229	iunH1	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
CIOPPAPO_01093	6.95e-10	-	-	-	-	-	-	-	-
CIOPPAPO_01094	5.59e-126	-	-	-	-	-	-	-	-
CIOPPAPO_01095	7.18e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CIOPPAPO_01096	8.04e-190	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CIOPPAPO_01097	5.29e-300	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CIOPPAPO_01098	2.77e-43	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	S	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	of the HAD superfamily
CIOPPAPO_01099	2.79e-176	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2087)
CIOPPAPO_01100	5.03e-73	-	-	-	S	-	-	-	LuxR family transcriptional regulator
CIOPPAPO_01101	7.21e-164	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	Chloramphenicol acetyltransferase
CIOPPAPO_01102	7.18e-279	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
CIOPPAPO_01103	2.75e-215	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
CIOPPAPO_01104	1.8e-124	-	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC transporter permease
CIOPPAPO_01105	0.0	-	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
CIOPPAPO_01106	4.31e-149	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
CIOPPAPO_01107	1.7e-155	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CIOPPAPO_01108	4.78e-79	-	-	-	-	-	-	-	-
CIOPPAPO_01109	1.59e-10	-	-	-	-	-	-	-	-
CIOPPAPO_01111	2.06e-54	-	-	-	-	-	-	-	-
CIOPPAPO_01112	5.43e-276	-	-	-	-	-	-	-	-
CIOPPAPO_01113	3.19e-240	ansB	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
CIOPPAPO_01114	1.12e-34	-	-	-	-	-	-	-	-
CIOPPAPO_01115	1.64e-314	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
CIOPPAPO_01116	8.54e-214	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_01117	6.99e-268	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CIOPPAPO_01119	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
CIOPPAPO_01120	6.85e-195	yitS	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CIOPPAPO_01121	5.93e-195	-	-	-	C	-	-	-	Aldo keto reductase
CIOPPAPO_01122	3.35e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF1722)
CIOPPAPO_01123	5.58e-91	yqeB	-	-	S	-	-	-	Pyrimidine dimer DNA glycosylase
CIOPPAPO_01124	0.0	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
CIOPPAPO_01125	2.7e-162	rcfB	-	-	K	-	-	-	Crp-like helix-turn-helix domain
CIOPPAPO_01126	3.45e-301	larA	5.1.2.1	-	S	ko:K22373	ko00620,map00620	ko00000,ko00001,ko01000	Domain of unknown function (DUF2088)
CIOPPAPO_01127	2.77e-172	larB	-	-	S	ko:K06898	-	ko00000	AIR carboxylase
CIOPPAPO_01128	2.28e-291	larC	4.99.1.12	-	S	ko:K09121	-	ko00000,ko01000	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
CIOPPAPO_01129	4.82e-190	larE	-	-	S	ko:K06864	-	ko00000	NAD synthase
CIOPPAPO_01130	6.33e-160	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
CIOPPAPO_01131	3.38e-226	-	-	-	U	ko:K07241	-	ko00000,ko02000	High-affinity nickel-transport protein
CIOPPAPO_01132	8.39e-54	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CIOPPAPO_01135	4.94e-268	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CIOPPAPO_01136	8.33e-189	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CIOPPAPO_01137	1.47e-174	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CIOPPAPO_01138	9.84e-261	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CIOPPAPO_01139	2.06e-190	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CIOPPAPO_01140	2.35e-190	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
CIOPPAPO_01141	4.9e-214	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
CIOPPAPO_01142	8.71e-202	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
CIOPPAPO_01143	2.61e-76	-	-	-	-	-	-	-	-
CIOPPAPO_01144	7.81e-42	-	-	-	-	-	-	-	-
CIOPPAPO_01145	7.47e-58	-	-	-	-	-	-	-	-
CIOPPAPO_01146	0.0	uvrB3	3.1.12.1	-	KL	ko:K07464	-	ko00000,ko01000,ko02048	DEAD_2
CIOPPAPO_01147	8.67e-160	-	-	-	-	-	-	-	-
CIOPPAPO_01148	2.48e-226	-	-	-	-	-	-	-	-
CIOPPAPO_01149	2.38e-252	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
CIOPPAPO_01150	2.01e-102	yoaA	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CIOPPAPO_01151	0.0	ybeC	-	-	E	-	-	-	amino acid
CIOPPAPO_01152	1.07e-151	-	-	-	S	-	-	-	membrane
CIOPPAPO_01153	4.21e-146	-	-	-	S	-	-	-	VIT family
CIOPPAPO_01154	2.56e-119	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
CIOPPAPO_01155	1.61e-219	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
CIOPPAPO_01157	1.15e-163	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
CIOPPAPO_01158	3.55e-257	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
CIOPPAPO_01160	6.05e-108	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
CIOPPAPO_01161	3.89e-188	-	-	-	-	-	-	-	-
CIOPPAPO_01162	2.64e-114	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
CIOPPAPO_01163	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CIOPPAPO_01164	3.68e-119	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
CIOPPAPO_01165	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
CIOPPAPO_01167	6.18e-238	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
CIOPPAPO_01168	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
CIOPPAPO_01169	6.25e-246	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
CIOPPAPO_01170	9.49e-282	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CIOPPAPO_01171	5.26e-316	lacP	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CIOPPAPO_01172	4.9e-49	-	-	-	-	-	-	-	-
CIOPPAPO_01173	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
CIOPPAPO_01174	1.27e-248	galM1	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
CIOPPAPO_01175	7.22e-262	-	1.3.8.1, 1.3.8.7	-	I	ko:K00248,ko:K00249,ko:K18244	ko00071,ko00280,ko00410,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map00650,map01100,map01110,map01120,map01130,map01200,map01212,map03320	ko00000,ko00001,ko00002,ko01000	Acyl-CoA dehydrogenase, C-terminal domain
CIOPPAPO_01176	1.23e-185	fixA	-	-	C	ko:K03521	-	ko00000	Electron transfer flavoprotein domain
CIOPPAPO_01177	2.65e-220	etfA	1.3.1.108	-	C	ko:K03522,ko:K22432	-	ko00000,ko01000,ko04147	Electron transfer flavoprotein FAD-binding domain
CIOPPAPO_01178	0.0	-	-	-	EP	-	-	-	Psort location Cytoplasmic, score
CIOPPAPO_01179	1.87e-97	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
CIOPPAPO_01180	2.6e-241	-	-	-	G	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
CIOPPAPO_01181	8.49e-163	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CIOPPAPO_01182	3.39e-169	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
CIOPPAPO_01183	1.66e-105	-	-	-	S	-	-	-	ASCH
CIOPPAPO_01184	0.0	-	-	-	EGP	-	-	-	Major Facilitator
CIOPPAPO_01185	8.06e-33	-	-	-	-	-	-	-	-
CIOPPAPO_01186	3.31e-195	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
CIOPPAPO_01187	9.85e-179	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
CIOPPAPO_01188	3.85e-199	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
CIOPPAPO_01189	7.83e-153	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
CIOPPAPO_01190	1.01e-91	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
CIOPPAPO_01191	8.67e-160	-	-	-	S	-	-	-	HAD-hyrolase-like
CIOPPAPO_01192	2.72e-102	-	-	-	T	-	-	-	Universal stress protein family
CIOPPAPO_01193	0.0	-	-	-	U	ko:K03451	-	ko00000	Belongs to the BCCT transporter (TC 2.A.15) family
CIOPPAPO_01194	1.08e-146	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
CIOPPAPO_01195	1.81e-108	-	-	-	S	ko:K04750	-	ko00000	3-demethylubiquinone-9 3-methyltransferase
CIOPPAPO_01196	1.18e-183	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CIOPPAPO_01197	8.99e-109	-	-	-	-	-	-	-	-
CIOPPAPO_01198	4.9e-177	-	-	-	L	-	-	-	Transposase
CIOPPAPO_01199	6.28e-304	codA	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	cytosine deaminase
CIOPPAPO_01200	3.09e-62	-	-	-	-	-	-	-	-
CIOPPAPO_01201	2.06e-192	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
CIOPPAPO_01202	2.3e-24	-	-	-	-	-	-	-	-
CIOPPAPO_01203	9.71e-157	yrkL	-	-	S	-	-	-	Flavodoxin-like fold
CIOPPAPO_01205	1.24e-44	-	-	-	-	-	-	-	-
CIOPPAPO_01207	1.8e-50	-	-	-	S	-	-	-	Cytochrome B5
CIOPPAPO_01208	2.32e-43	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
CIOPPAPO_01209	1.58e-139	mhqD	-	-	S	ko:K06999	-	ko00000	Dienelactone hydrolase family
CIOPPAPO_01210	5.31e-69	-	-	-	-	-	-	-	-
CIOPPAPO_01211	5.46e-281	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific adenine glycosylase
CIOPPAPO_01212	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
CIOPPAPO_01213	0.0	-	-	-	M	-	-	-	domain, Protein
CIOPPAPO_01214	1.27e-68	-	-	-	-	-	-	-	-
CIOPPAPO_01215	1.25e-240	-	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
CIOPPAPO_01216	1.58e-83	-	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
CIOPPAPO_01217	2.41e-235	tas	-	-	C	-	-	-	Aldo/keto reductase family
CIOPPAPO_01218	8.65e-43	-	-	-	-	-	-	-	-
CIOPPAPO_01219	2.57e-226	-	-	-	EG	-	-	-	EamA-like transporter family
CIOPPAPO_01220	2.75e-145	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CIOPPAPO_01221	2.66e-248	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CIOPPAPO_01222	2.8e-188	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CIOPPAPO_01223	9.75e-131	tag2	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
CIOPPAPO_01224	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CIOPPAPO_01226	0.0	-	3.2.1.21, 3.2.1.52	GH3	G	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	ko00000,ko00001,ko00002,ko01000	hydrolase, family 3
CIOPPAPO_01227	3.33e-242	pva2	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
CIOPPAPO_01228	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
CIOPPAPO_01229	6.27e-270	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
CIOPPAPO_01230	8.3e-134	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
CIOPPAPO_01231	3.19e-194	-	-	-	S	-	-	-	Zinc-dependent metalloprotease
CIOPPAPO_01232	3.73e-213	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	hydrolase, family 25
CIOPPAPO_01233	3.44e-261	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
CIOPPAPO_01234	1.64e-72	yphJ	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	decarboxylase
CIOPPAPO_01235	5.66e-105	yphH	-	-	S	-	-	-	Cupin domain
CIOPPAPO_01236	2.39e-98	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CIOPPAPO_01237	5.81e-131	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_01239	2.27e-288	-	-	-	-	-	-	-	-
CIOPPAPO_01240	2.52e-202	dkgB	-	-	S	-	-	-	reductase
CIOPPAPO_01241	3.14e-258	-	-	-	EGP	-	-	-	Major Facilitator
CIOPPAPO_01242	4.5e-262	-	-	-	EGP	-	-	-	Major Facilitator
CIOPPAPO_01243	3.88e-124	namA	-	-	C	-	-	-	Oxidoreductase
CIOPPAPO_01244	6.89e-34	namA	-	-	C	-	-	-	Oxidoreductase
CIOPPAPO_01245	1.51e-53	pduN	-	-	CQ	ko:K04028	-	ko00000	Ethanolamine utilisation protein EutN/carboxysome
CIOPPAPO_01246	1.6e-72	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CIOPPAPO_01247	2.75e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
CIOPPAPO_01248	3.35e-228	-	-	-	U	-	-	-	FFAT motif binding
CIOPPAPO_01249	6.64e-146	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF-type riboflavin transporter, S component
CIOPPAPO_01250	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
CIOPPAPO_01251	3.69e-203	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type cobalt transport system permease component CbiQ and related transporters
CIOPPAPO_01252	1.85e-90	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
CIOPPAPO_01253	0.0	epsA	-	-	I	-	-	-	PAP2 superfamily
CIOPPAPO_01254	8.65e-144	aqpZ	-	-	U	ko:K06188	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
CIOPPAPO_01255	4.52e-140	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CIOPPAPO_01256	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
CIOPPAPO_01257	1.02e-125	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
CIOPPAPO_01258	3.29e-147	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
CIOPPAPO_01259	8.94e-177	-	-	-	T	-	-	-	Tyrosine phosphatase family
CIOPPAPO_01260	6.71e-163	-	-	-	-	-	-	-	-
CIOPPAPO_01261	4.79e-160	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CIOPPAPO_01262	5.31e-82	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
CIOPPAPO_01263	1.27e-222	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
CIOPPAPO_01264	4.84e-112	gpo	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
CIOPPAPO_01265	3.75e-164	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CIOPPAPO_01266	1.79e-267	-	-	-	EGP	ko:K02030,ko:K07552	-	ko00000,ko00002,ko02000	Drug resistance transporter Bcr CflA subfamily
CIOPPAPO_01267	2.05e-186	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CIOPPAPO_01268	4.91e-200	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
CIOPPAPO_01269	1.44e-138	-	-	-	-	-	-	-	-
CIOPPAPO_01270	1.05e-53	-	-	-	C	-	-	-	nadph quinone reductase
CIOPPAPO_01271	1.62e-170	-	-	-	S	-	-	-	KR domain
CIOPPAPO_01272	1.48e-86	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
CIOPPAPO_01273	5.5e-83	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CIOPPAPO_01274	2.41e-92	-	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CIOPPAPO_01275	2.94e-34	-	-	-	-	-	-	-	-
CIOPPAPO_01276	4.1e-118	-	-	-	-	-	-	-	-
CIOPPAPO_01277	2.47e-44	-	-	-	S	-	-	-	Transglycosylase associated protein
CIOPPAPO_01278	2.1e-197	-	-	-	-	-	-	-	-
CIOPPAPO_01279	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
CIOPPAPO_01280	5.9e-227	-	-	-	U	-	-	-	Major Facilitator Superfamily
CIOPPAPO_01281	4.24e-122	laaE	-	-	K	-	-	-	Transcriptional regulator PadR-like family
CIOPPAPO_01282	1.94e-86	lysM	-	-	M	-	-	-	LysM domain
CIOPPAPO_01283	9.77e-170	XK27_07210	-	-	S	-	-	-	B3 4 domain
CIOPPAPO_01284	1.75e-157	-	-	-	K	ko:K10914,ko:K21828	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	Cyclic nucleotide-monophosphate binding domain
CIOPPAPO_01285	4.23e-218	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
CIOPPAPO_01286	1.09e-275	arcT	-	-	E	-	-	-	Aminotransferase
CIOPPAPO_01287	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
CIOPPAPO_01288	2.48e-252	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CIOPPAPO_01289	5.7e-301	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
CIOPPAPO_01290	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
CIOPPAPO_01291	1.22e-288	ycbA	2.7.13.3	-	T	ko:K07706,ko:K07717	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	histidine kinase DNA gyrase B
CIOPPAPO_01292	8.33e-190	-	-	-	KT	ko:K07719	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	YcbB domain
CIOPPAPO_01293	0.0	arcD	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
CIOPPAPO_01294	0.0	arcT	-	-	E	-	-	-	Dipeptidase
CIOPPAPO_01296	1.58e-264	-	-	-	-	-	-	-	-
CIOPPAPO_01297	6.19e-136	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
CIOPPAPO_01298	6.87e-239	nhaP2	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CIOPPAPO_01299	1.2e-214	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CIOPPAPO_01300	2.58e-280	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily
CIOPPAPO_01301	3.25e-187	msmR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
CIOPPAPO_01302	0.0	-	3.2.1.31	-	G	ko:K01195	ko00040,ko00531,ko00860,ko00944,ko00983,ko01100,ko01110,ko04142,map00040,map00531,map00860,map00944,map00983,map01100,map01110,map04142	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 2 family
CIOPPAPO_01303	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2264)
CIOPPAPO_01304	5.17e-277	-	-	-	G	-	-	-	Major Facilitator
CIOPPAPO_01305	0.0	-	-	-	G	-	-	-	Phosphodiester glycosidase
CIOPPAPO_01306	2.8e-87	-	-	-	S	-	-	-	PFAM Metallo-beta-lactamase superfamily
CIOPPAPO_01307	1.71e-06	-	-	-	CK	-	-	-	HEAT repeats
CIOPPAPO_01309	7.89e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF3781)
CIOPPAPO_01310	1.23e-52	-	-	-	-	-	-	-	-
CIOPPAPO_01311	9.51e-102	yafP	-	-	K	ko:K03830	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CIOPPAPO_01312	3.05e-169	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CIOPPAPO_01313	0.0	-	-	-	M	-	-	-	domain protein
CIOPPAPO_01314	6.11e-238	ydbI	-	-	K	-	-	-	AI-2E family transporter
CIOPPAPO_01315	2.53e-269	xylR	-	-	GK	-	-	-	ROK family
CIOPPAPO_01316	4.09e-171	-	-	-	-	-	-	-	-
CIOPPAPO_01317	7.73e-301	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
CIOPPAPO_01318	7.53e-71	-	-	-	S	-	-	-	branched-chain amino acid
CIOPPAPO_01319	2.74e-174	azlC	-	-	E	-	-	-	AzlC protein
CIOPPAPO_01320	1.08e-112	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
CIOPPAPO_01321	1.02e-234	-	-	-	L	ko:K07482	-	ko00000	PFAM Integrase, catalytic core
CIOPPAPO_01322	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
CIOPPAPO_01323	1.84e-41	-	-	-	S	ko:K21449	-	ko00000,ko02000	Domain of unknown function (DUF4430)
CIOPPAPO_01324	1.12e-214	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
CIOPPAPO_01325	1.84e-298	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
CIOPPAPO_01326	4.75e-268	hpk31	-	-	T	-	-	-	Histidine kinase
CIOPPAPO_01327	4.64e-159	vanR	-	-	K	-	-	-	response regulator
CIOPPAPO_01328	6.73e-266	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CIOPPAPO_01329	2e-95	-	-	-	-	-	-	-	-
CIOPPAPO_01330	1.01e-169	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
CIOPPAPO_01331	4.64e-255	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CIOPPAPO_01332	1.15e-43	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
CIOPPAPO_01333	1.44e-199	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CIOPPAPO_01334	3.52e-176	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
CIOPPAPO_01335	1.27e-185	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CIOPPAPO_01336	5.42e-169	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
CIOPPAPO_01337	2.42e-204	-	3.1.4.17, 3.1.4.53	-	S	ko:K01120,ko:K03651	ko00230,ko02025,map00230,map02025	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
CIOPPAPO_01338	3.09e-215	rihA	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
CIOPPAPO_01339	6.38e-282	pbuO_1	-	-	S	ko:K06901	-	ko00000,ko02000	Permease family
CIOPPAPO_01340	1.21e-286	nupG	-	-	F	ko:K16323	-	ko00000,ko02000	Nucleoside
CIOPPAPO_01341	4.01e-196	-	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Metalloenzyme superfamily
CIOPPAPO_01342	1.97e-143	-	-	-	GM	-	-	-	NmrA-like family
CIOPPAPO_01343	3.98e-58	-	-	-	-	-	-	-	-
CIOPPAPO_01344	7.74e-117	-	-	-	-	-	-	-	-
CIOPPAPO_01345	6.01e-54	-	-	-	-	-	-	-	-
CIOPPAPO_01346	2.61e-83	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
CIOPPAPO_01348	1.03e-129	-	-	-	-	-	-	-	-
CIOPPAPO_01349	0.0	-	-	-	-	-	-	-	-
CIOPPAPO_01350	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
CIOPPAPO_01351	2.99e-83	-	-	-	-	-	-	-	-
CIOPPAPO_01352	1.09e-275	-	-	-	EK	-	-	-	Aminotransferase, class I
CIOPPAPO_01353	4.39e-214	-	-	-	K	-	-	-	LysR substrate binding domain
CIOPPAPO_01355	9.83e-37	-	-	-	-	-	-	-	-
CIOPPAPO_01356	2.2e-128	-	-	-	K	-	-	-	DNA-templated transcription, initiation
CIOPPAPO_01357	3.33e-265	-	-	-	-	-	-	-	-
CIOPPAPO_01358	7.17e-77	-	-	-	-	-	-	-	-
CIOPPAPO_01359	2.51e-71	-	-	-	-	-	-	-	-
CIOPPAPO_01360	4.42e-249	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
CIOPPAPO_01361	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_01362	5.18e-141	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
CIOPPAPO_01363	4.63e-187	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
CIOPPAPO_01364	2.56e-177	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
CIOPPAPO_01365	1.61e-188	yneD	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
CIOPPAPO_01366	2.26e-166	yjkA	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
CIOPPAPO_01367	6.62e-148	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_01368	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CIOPPAPO_01369	7.6e-113	-	-	-	-	-	-	-	-
CIOPPAPO_01371	7.46e-177	-	-	-	L	-	-	-	Transposase
CIOPPAPO_01373	6.4e-36	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CIOPPAPO_01374	2.24e-101	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CIOPPAPO_01375	2.06e-178	XK27_00890	-	-	S	ko:K08974	-	ko00000	Domain of unknown function (DUF368)
CIOPPAPO_01376	1.23e-169	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CIOPPAPO_01377	1.35e-281	xylR	-	-	GK	-	-	-	ROK family
CIOPPAPO_01378	4.04e-204	-	-	-	C	-	-	-	Aldo keto reductase
CIOPPAPO_01379	3.69e-314	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
CIOPPAPO_01380	0.0	cpdB	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
CIOPPAPO_01381	2.9e-159	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
CIOPPAPO_01382	9.69e-224	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CIOPPAPO_01383	0.0	pepF2	-	-	E	-	-	-	Oligopeptidase F
CIOPPAPO_01384	3.7e-96	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_01385	6.23e-209	-	-	-	-	-	-	-	-
CIOPPAPO_01386	6.33e-253	-	-	-	S	-	-	-	DUF218 domain
CIOPPAPO_01387	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
CIOPPAPO_01388	2.59e-199	nanK	-	-	GK	-	-	-	ROK family
CIOPPAPO_01389	0.0	-	-	-	E	-	-	-	Amino acid permease
CIOPPAPO_01390	1.05e-41	-	-	-	-	-	-	-	-
CIOPPAPO_01391	1.54e-244	-	-	-	S	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
CIOPPAPO_01393	4.17e-67	-	-	-	-	-	-	-	-
CIOPPAPO_01394	4.54e-100	-	-	-	K	ko:K06075	-	ko00000,ko03000	Winged helix DNA-binding domain
CIOPPAPO_01395	8.02e-144	nnrE	5.1.99.6	-	H	ko:K17759	-	ko00000,ko01000	Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
CIOPPAPO_01396	2.57e-133	aad	3.4.13.22	-	E	ko:K08641	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
CIOPPAPO_01397	5.95e-147	-	-	-	-	-	-	-	-
CIOPPAPO_01398	3.53e-228	yxeI	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CIOPPAPO_01399	1.34e-109	lytE	-	-	M	-	-	-	NlpC P60 family
CIOPPAPO_01400	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CIOPPAPO_01402	1.05e-77	-	-	-	K	-	-	-	Helix-turn-helix domain
CIOPPAPO_01403	0.0	-	3.4.19.1	-	E	ko:K01303	-	ko00000,ko01000,ko01002	Prolyl oligopeptidase family
CIOPPAPO_01404	8.23e-218	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CIOPPAPO_01405	7.46e-59	-	-	-	-	-	-	-	-
CIOPPAPO_01406	3.64e-86	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CIOPPAPO_01407	0.0	nhaP2	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CIOPPAPO_01408	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CIOPPAPO_01409	1.27e-144	ssuA	-	-	P	ko:K02051,ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	NMT1-like family
CIOPPAPO_01410	6e-224	-	6.2.1.48	-	IQ	ko:K02182	-	ko00000,ko01000	AMP-binding enzyme C-terminal domain
CIOPPAPO_01411	1.25e-184	-	-	-	I	-	-	-	Acyltransferase family
CIOPPAPO_01412	0.0	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
CIOPPAPO_01413	8.95e-151	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
CIOPPAPO_01414	1.57e-203	rihA	-	-	F	ko:K01250	-	ko00000,ko01000	Inosine-uridine preferring nucleoside hydrolase
CIOPPAPO_01416	1.71e-239	nupC	-	-	F	ko:K11535	-	ko00000,ko02000	Na+ dependent nucleoside transporter C-terminus
CIOPPAPO_01417	8.82e-189	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CIOPPAPO_01418	1.93e-95	-	-	-	S	-	-	-	Membrane
CIOPPAPO_01419	4.35e-144	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
CIOPPAPO_01420	5.77e-156	psuK	2.7.1.83	-	G	ko:K16328	ko00240,map00240	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
CIOPPAPO_01421	1.08e-139	psuK	2.7.1.83	-	GK	ko:K16328	ko00240,map00240	ko00000,ko00001,ko01000	Winged helix-turn-helix DNA-binding
CIOPPAPO_01423	7.41e-229	-	-	-	K	ko:K02529,ko:K03435	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
CIOPPAPO_01424	2.97e-69	-	-	-	S	-	-	-	Pentapeptide repeats (8 copies)
CIOPPAPO_01425	4.43e-129	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
CIOPPAPO_01426	5.54e-111	hmpT	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
CIOPPAPO_01427	8.57e-177	thiD	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
CIOPPAPO_01428	0.0	norG_2	-	-	K	-	-	-	Aminotransferase class I and II
CIOPPAPO_01429	1.23e-92	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase
CIOPPAPO_01430	2.91e-182	-	-	-	S	-	-	-	Membrane
CIOPPAPO_01431	5.71e-237	tdh	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
CIOPPAPO_01432	7.37e-221	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
CIOPPAPO_01433	3.55e-99	-	-	-	-	-	-	-	-
CIOPPAPO_01434	7.21e-66	ykkC	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
CIOPPAPO_01435	1.54e-67	ykkD	-	-	P	ko:K18925	-	ko00000,ko00002,ko02000	Multidrug resistance protein
CIOPPAPO_01436	3.85e-82	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
CIOPPAPO_01437	8.63e-188	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
CIOPPAPO_01439	0.0	treP	2.4.1.64	GH65	G	ko:K05342	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
CIOPPAPO_01440	5.82e-250	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CIOPPAPO_01441	0.0	xylP2	-	-	G	-	-	-	symporter
CIOPPAPO_01442	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CIOPPAPO_01443	6.22e-108	-	-	-	-	-	-	-	-
CIOPPAPO_01445	1.66e-224	cytR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Transcriptional regulator, LacI family
CIOPPAPO_01446	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
CIOPPAPO_01447	0.0	-	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
CIOPPAPO_01448	6.82e-141	-	-	-	-	-	-	-	-
CIOPPAPO_01449	1.19e-97	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CIOPPAPO_01451	1.96e-234	mdt(A)	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
CIOPPAPO_01452	1.93e-285	-	-	-	C	-	-	-	Oxidoreductase
CIOPPAPO_01454	3.41e-89	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
CIOPPAPO_01455	5.55e-269	mccF	-	-	V	-	-	-	LD-carboxypeptidase
CIOPPAPO_01456	1.56e-225	-	3.2.2.1, 3.2.2.8	-	F	ko:K01239,ko:K10213	ko00230,ko00240,ko00760,ko01100,map00230,map00240,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
CIOPPAPO_01457	1.56e-160	-	-	-	K	ko:K16326	-	ko00000,ko03000	Cyclic nucleotide-monophosphate binding domain
CIOPPAPO_01458	4.22e-219	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CIOPPAPO_01459	5.49e-282	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	Dehydrogenase
CIOPPAPO_01460	3.59e-160	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CIOPPAPO_01461	2.34e-154	-	-	-	S	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	GyrI-like small molecule binding domain
CIOPPAPO_01462	1.48e-284	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
CIOPPAPO_01463	5.66e-159	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_01464	2.67e-231	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CIOPPAPO_01465	9.41e-111	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_01466	3.51e-272	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CIOPPAPO_01467	3.07e-105	thiW	-	-	S	-	-	-	Thiamine-precursor transporter protein (ThiW)
CIOPPAPO_01468	4.7e-215	mleP2	-	-	S	ko:K07088	-	ko00000	Sodium Bile acid symporter family
CIOPPAPO_01469	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
CIOPPAPO_01470	9.16e-208	mleR	-	-	K	-	-	-	LysR family
CIOPPAPO_01471	2.8e-189	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
CIOPPAPO_01472	1.67e-275	aguA2	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	agmatine deiminase
CIOPPAPO_01473	5.52e-214	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
CIOPPAPO_01474	1.49e-275	aguA	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	agmatine deiminase
CIOPPAPO_01475	1.42e-304	aguD	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	Amino Acid
CIOPPAPO_01476	1.96e-251	ptcA	2.1.3.6	-	E	ko:K13252	-	ko00000,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CIOPPAPO_01477	2.43e-264	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
CIOPPAPO_01478	5.32e-36	-	-	-	-	-	-	-	-
CIOPPAPO_01479	2.05e-200	-	-	-	EG	-	-	-	EamA-like transporter family
CIOPPAPO_01480	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
CIOPPAPO_01481	5.93e-290	-	-	-	M	-	-	-	domain protein
CIOPPAPO_01482	5.91e-51	-	-	-	-	-	-	-	-
CIOPPAPO_01483	2.06e-42	-	-	-	S	-	-	-	Transglycosylase associated protein
CIOPPAPO_01484	7.33e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF2992)
CIOPPAPO_01485	5.67e-198	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_01486	0.0	-	3.2.1.45	GH30	G	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	ko00000,ko00001,ko01000	Glycosyl hydrolase family 30 TIM-barrel domain
CIOPPAPO_01487	1.76e-176	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
CIOPPAPO_01488	7.75e-140	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CIOPPAPO_01489	8.8e-153	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
CIOPPAPO_01490	4.46e-276	-	-	-	EGP	ko:K08196	-	ko00000,ko02000	Major Facilitator
CIOPPAPO_01491	5.23e-170	-	-	-	S	-	-	-	Protein of unknown function
CIOPPAPO_01492	1.6e-219	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CIOPPAPO_01493	1.38e-196	-	-	-	G	-	-	-	Belongs to the carbohydrate kinase PfkB family
CIOPPAPO_01494	0.0	-	-	-	F	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
CIOPPAPO_01495	4.16e-235	-	-	-	O	-	-	-	ADP-ribosylglycohydrolase
CIOPPAPO_01496	3.25e-155	-	-	-	K	-	-	-	UTRA
CIOPPAPO_01497	8.42e-197	yhaZ	-	-	L	-	-	-	DNA alkylation repair enzyme
CIOPPAPO_01498	9.83e-163	-	-	-	F	-	-	-	glutamine amidotransferase
CIOPPAPO_01499	0.0	fusA1	-	-	J	-	-	-	elongation factor G
CIOPPAPO_01500	4.61e-292	-	-	-	EK	-	-	-	Aminotransferase, class I
CIOPPAPO_01502	5.45e-264	-	-	-	G	-	-	-	Major Facilitator
CIOPPAPO_01503	0.0	-	-	-	G	-	-	-	Right handed beta helix region
CIOPPAPO_01504	9.68e-172	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CIOPPAPO_01505	2.72e-93	-	-	-	S	-	-	-	COG NOG18757 non supervised orthologous group
CIOPPAPO_01506	1.24e-258	pmrB	-	-	EGP	-	-	-	Major Facilitator Superfamily
CIOPPAPO_01507	5.3e-200	-	-	-	C	-	-	-	Aldo keto reductase
CIOPPAPO_01508	1.55e-142	lacA	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
CIOPPAPO_01509	2.21e-151	-	-	-	-	-	-	-	-
CIOPPAPO_01511	5.07e-150	cah	4.2.1.1	-	P	ko:K01674	ko00910,map00910	ko00000,ko00001,ko01000	Eukaryotic-type carbonic anhydrase
CIOPPAPO_01512	1.35e-283	-	-	-	LO	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
CIOPPAPO_01513	7.02e-36	-	-	-	K	ko:K07729	-	ko00000,ko03000	Transcriptional
CIOPPAPO_01514	3.65e-94	-	-	-	-	-	-	-	-
CIOPPAPO_01515	0.0	-	-	-	M	-	-	-	MucBP domain
CIOPPAPO_01516	4.49e-195	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
CIOPPAPO_01517	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CIOPPAPO_01518	3.33e-52	-	-	-	-	-	-	-	-
CIOPPAPO_01519	8.89e-98	-	-	-	S	ko:K02348	-	ko00000	Gnat family
CIOPPAPO_01520	2.04e-90	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_01521	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CIOPPAPO_01524	5.19e-87	-	-	-	K	-	-	-	Helix-turn-helix domain
CIOPPAPO_01525	2.22e-59	-	-	-	-	-	-	-	-
CIOPPAPO_01526	2.3e-142	-	-	-	GM	-	-	-	NAD(P)H-binding
CIOPPAPO_01527	1.64e-74	-	-	-	-	-	-	-	-
CIOPPAPO_01528	3.37e-129	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Peroxiredoxin
CIOPPAPO_01529	4.41e-289	gltT	-	-	U	ko:K03309,ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
CIOPPAPO_01530	3.51e-221	-	-	-	-	-	-	-	-
CIOPPAPO_01531	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CIOPPAPO_01532	0.0	-	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
CIOPPAPO_01533	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
CIOPPAPO_01534	1.31e-135	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_01535	1.01e-21	-	-	-	C	-	-	-	nadph quinone reductase
CIOPPAPO_01538	4.4e-269	-	-	-	E	-	-	-	Major Facilitator Superfamily
CIOPPAPO_01539	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
CIOPPAPO_01540	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CIOPPAPO_01541	3.33e-215	-	-	-	-	-	-	-	-
CIOPPAPO_01542	4.82e-121	-	-	-	S	-	-	-	Protein of unknown function (DUF1097)
CIOPPAPO_01543	0.0	menE	6.2.1.26	-	H	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
CIOPPAPO_01544	7.8e-198	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CIOPPAPO_01545	1.27e-74	yuxO	-	-	Q	-	-	-	Thioesterase superfamily
CIOPPAPO_01546	1.71e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF2798)
CIOPPAPO_01547	1.67e-127	-	-	-	S	ko:K09962	-	ko00000	Nucleotidyltransferase
CIOPPAPO_01548	1.05e-172	-	-	-	-	-	-	-	-
CIOPPAPO_01549	4.14e-72	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
CIOPPAPO_01550	4.06e-184	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
CIOPPAPO_01551	1.44e-292	-	-	-	S	ko:K01421	-	ko00000	ABC-2 family transporter protein
CIOPPAPO_01552	9.1e-148	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_01553	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
CIOPPAPO_01554	1.19e-107	-	-	-	S	-	-	-	GtrA-like protein
CIOPPAPO_01555	1.68e-94	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CIOPPAPO_01556	3.07e-122	cadD	-	-	P	-	-	-	Cadmium resistance transporter
CIOPPAPO_01558	2.93e-129	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
CIOPPAPO_01559	1.01e-225	draG	-	-	O	-	-	-	ADP-ribosylglycohydrolase
CIOPPAPO_01560	3.96e-181	-	-	-	I	ko:K01066	-	ko00000,ko01000	Esterase
CIOPPAPO_01561	5.99e-45	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
CIOPPAPO_01562	5.73e-104	argO	-	-	S	ko:K06895	-	ko00000,ko02000	LysE type translocator
CIOPPAPO_01563	7.48e-159	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
CIOPPAPO_01564	4.58e-113	-	-	-	-	-	-	-	-
CIOPPAPO_01565	2.98e-181	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
CIOPPAPO_01567	0.000303	-	-	-	NU	-	-	-	Mycoplasma protein of unknown function, DUF285
CIOPPAPO_01568	9.25e-79	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CIOPPAPO_01569	6.11e-210	-	-	-	-	-	-	-	-
CIOPPAPO_01570	4.13e-67	-	-	-	-	-	-	-	-
CIOPPAPO_01572	3.5e-58	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CIOPPAPO_01573	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CIOPPAPO_01574	9.1e-05	-	-	-	-	-	-	-	-
CIOPPAPO_01578	1.78e-09	-	-	-	-	-	-	-	-
CIOPPAPO_01580	5.2e-108	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CIOPPAPO_01581	6.04e-269	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
CIOPPAPO_01582	2.33e-200	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
CIOPPAPO_01583	1.13e-191	yycI	-	-	S	-	-	-	YycH protein
CIOPPAPO_01584	5.57e-306	yycH	-	-	S	-	-	-	YycH protein
CIOPPAPO_01585	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CIOPPAPO_01586	1.19e-170	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
CIOPPAPO_01588	1.09e-165	-	-	-	E	-	-	-	Matrixin
CIOPPAPO_01589	1.43e-52	-	-	-	-	-	-	-	-
CIOPPAPO_01590	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CIOPPAPO_01591	2.78e-36	-	-	-	-	-	-	-	-
CIOPPAPO_01592	6.07e-269	yttB	-	-	EGP	-	-	-	Major Facilitator
CIOPPAPO_01593	1.02e-129	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
CIOPPAPO_01594	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
CIOPPAPO_01596	6.37e-92	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CIOPPAPO_01597	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
CIOPPAPO_01598	2.36e-92	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
CIOPPAPO_01599	1.27e-129	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_01600	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CIOPPAPO_01601	2.77e-293	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
CIOPPAPO_01602	2.46e-173	-	-	-	-	-	-	-	-
CIOPPAPO_01603	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CIOPPAPO_01604	4.26e-293	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
CIOPPAPO_01605	1.33e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CIOPPAPO_01606	5.15e-104	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CIOPPAPO_01607	1.36e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
CIOPPAPO_01608	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CIOPPAPO_01609	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CIOPPAPO_01610	1.08e-269	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CIOPPAPO_01611	9.18e-49	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
CIOPPAPO_01612	5.53e-265	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CIOPPAPO_01613	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CIOPPAPO_01614	1.61e-20	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
CIOPPAPO_01615	9.04e-78	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CIOPPAPO_01616	1.67e-185	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CIOPPAPO_01617	9.16e-149	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
CIOPPAPO_01618	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CIOPPAPO_01619	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CIOPPAPO_01620	3.14e-81	-	-	-	-	-	-	-	-
CIOPPAPO_01621	4.81e-50	-	-	-	-	-	-	-	-
CIOPPAPO_01622	1.76e-162	yfnB	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	HAD-hyrolase-like
CIOPPAPO_01623	4.53e-50	-	-	-	-	-	-	-	-
CIOPPAPO_01624	8.07e-314	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
CIOPPAPO_01625	2.5e-147	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
CIOPPAPO_01626	4.33e-127	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
CIOPPAPO_01627	2.51e-120	ykhA	3.1.2.20	-	I	ko:K01073	-	ko00000,ko01000	Thioesterase superfamily
CIOPPAPO_01628	8.83e-285	-	-	-	S	-	-	-	module of peptide synthetase
CIOPPAPO_01629	6.34e-277	tcaB	-	-	EGP	ko:K07552	-	ko00000,ko02000	Drug resistance transporter Bcr CflA subfamily
CIOPPAPO_01630	2.18e-138	sip3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CIOPPAPO_01631	3.21e-177	-	-	-	L	-	-	-	Transposase
CIOPPAPO_01632	2.6e-101	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
CIOPPAPO_01633	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CIOPPAPO_01634	6.1e-143	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
CIOPPAPO_01635	1.23e-67	-	-	-	-	-	-	-	-
CIOPPAPO_01638	4.49e-74	-	-	-	L	-	-	-	Transposase DDE domain
CIOPPAPO_01639	1.18e-70	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
CIOPPAPO_01640	1.47e-279	aguA	3.2.1.139	-	G	ko:K01235	-	ko00000,ko01000	Glycosyl hydrolase 67
CIOPPAPO_01641	5e-146	uxuT	-	-	G	ko:K03292,ko:K16210	-	ko00000,ko02000	MFS/sugar transport protein
CIOPPAPO_01642	1.56e-134	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	Glycosyl hydrolase family 2, sugar binding domain protein
CIOPPAPO_01643	2.4e-188	-	3.2.1.37	GH43	K	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	family 39
CIOPPAPO_01644	4.7e-215	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
CIOPPAPO_01647	6.82e-116	-	-	-	-	-	-	-	-
CIOPPAPO_01648	2.31e-191	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
CIOPPAPO_01649	2.12e-30	-	-	-	-	-	-	-	-
CIOPPAPO_01650	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CIOPPAPO_01651	2.89e-198	rhaS2	-	-	K	-	-	-	Transcriptional regulator, AraC family
CIOPPAPO_01652	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
CIOPPAPO_01653	0.0	xynB	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
CIOPPAPO_01654	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
CIOPPAPO_01657	9.8e-113	ccl	-	-	S	-	-	-	QueT transporter
CIOPPAPO_01658	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
CIOPPAPO_01659	1.21e-212	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
CIOPPAPO_01660	5.68e-118	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
CIOPPAPO_01661	8.62e-128	-	-	-	K	-	-	-	LysR substrate binding domain
CIOPPAPO_01662	1.1e-160	drrB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
CIOPPAPO_01663	5.01e-204	drrA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CIOPPAPO_01664	3.56e-121	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
CIOPPAPO_01667	1.16e-21	-	-	-	K	-	-	-	toxin-antitoxin pair type II binding
CIOPPAPO_01668	1e-289	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CIOPPAPO_01669	6.36e-231	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
CIOPPAPO_01670	1.45e-129	-	-	-	GM	-	-	-	NAD(P)H-binding
CIOPPAPO_01671	8.64e-76	-	-	-	-	-	-	-	-
CIOPPAPO_01672	1.29e-235	pgdA	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	polysaccharide deacetylase
CIOPPAPO_01673	1.49e-274	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
CIOPPAPO_01674	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
CIOPPAPO_01675	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
CIOPPAPO_01676	4.19e-159	-	-	-	-	-	-	-	-
CIOPPAPO_01677	5.43e-179	-	-	-	K	-	-	-	Helix-turn-helix domain
CIOPPAPO_01679	1.25e-119	qorB	1.6.5.2	-	GM	ko:K19267	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NmrA-like family
CIOPPAPO_01680	7.07e-92	ywnA	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_01681	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
CIOPPAPO_01682	2.41e-232	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
CIOPPAPO_01683	9.28e-172	-	-	-	GM	-	-	-	Male sterility protein
CIOPPAPO_01684	8.93e-45	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_01685	1.32e-36	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CIOPPAPO_01686	2.03e-78	-	-	-	T	-	-	-	EAL domain
CIOPPAPO_01687	7.52e-128	-	-	-	S	-	-	-	Alpha beta hydrolase
CIOPPAPO_01688	6.47e-96	-	-	-	GM	-	-	-	NmrA-like family
CIOPPAPO_01689	1.02e-52	-	-	-	K	ko:K08365	-	ko00000,ko03000	MerR, DNA binding
CIOPPAPO_01690	9.58e-64	-	-	-	C	-	-	-	Flavodoxin
CIOPPAPO_01691	2.26e-225	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CIOPPAPO_01693	7.19e-177	-	3.8.1.5	-	S	ko:K01563	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Alpha/beta hydrolase family
CIOPPAPO_01694	6.57e-50	-	-	-	T	-	-	-	Cyclic nucleotide-binding protein
CIOPPAPO_01695	3.16e-81	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
CIOPPAPO_01696	5.78e-110	fabG3	1.1.1.53	-	IQ	ko:K00038	ko00140,ko01100,map00140,map01100	ko00000,ko00001,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
CIOPPAPO_01697	4.07e-217	-	-	-	M	-	-	-	MucBP domain
CIOPPAPO_01698	2.83e-54	-	-	-	M	-	-	-	MucBP domain
CIOPPAPO_01699	2.47e-63	-	-	-	-	-	-	-	-
CIOPPAPO_01700	1.07e-38	-	-	-	S	-	-	-	MazG-like family
CIOPPAPO_01701	1.31e-240	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
CIOPPAPO_01702	5.68e-84	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_01703	6.57e-255	-	-	-	C	-	-	-	Belongs to the aldehyde dehydrogenase family
CIOPPAPO_01704	7.23e-202	-	1.1.1.65	-	C	ko:K05275	ko00750,ko01100,ko01120,map00750,map01100,map01120	ko00000,ko00001,ko01000	Aldo keto reductase
CIOPPAPO_01705	1.28e-145	-	-	-	-	-	-	-	-
CIOPPAPO_01706	1.09e-271	yttB	-	-	EGP	-	-	-	Major Facilitator
CIOPPAPO_01707	2.05e-311	glpT	-	-	G	ko:K02445	-	ko00000,ko02000	Major Facilitator Superfamily
CIOPPAPO_01708	9.35e-173	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
CIOPPAPO_01709	1.14e-110	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
CIOPPAPO_01710	0.0	-	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
CIOPPAPO_01711	0.0	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
CIOPPAPO_01713	6.89e-184	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
CIOPPAPO_01714	2.99e-222	-	-	-	K	ko:K02525	-	ko00000,ko03000	Transcriptional regulator, LacI family
CIOPPAPO_01715	1.63e-314	yhdP	-	-	S	-	-	-	Transporter associated domain
CIOPPAPO_01716	1.62e-80	-	-	-	-	-	-	-	-
CIOPPAPO_01717	5.23e-97	hsp1	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
CIOPPAPO_01718	0.0	-	-	-	E	-	-	-	Amino Acid
CIOPPAPO_01719	2.74e-207	yvgN	-	-	S	-	-	-	Aldo keto reductase
CIOPPAPO_01720	6.97e-05	-	-	-	-	-	-	-	-
CIOPPAPO_01721	0.0	yfgQ	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
CIOPPAPO_01722	1.24e-120	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
CIOPPAPO_01725	0.0	glpQ4	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
CIOPPAPO_01726	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
CIOPPAPO_01727	1.13e-109	-	-	-	M	-	-	-	LysM domain protein
CIOPPAPO_01728	5.43e-82	-	-	-	M	-	-	-	LysM domain protein
CIOPPAPO_01729	2.15e-75	lysM	-	-	M	-	-	-	LysM domain
CIOPPAPO_01731	2.2e-123	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_01732	2.87e-213	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
CIOPPAPO_01733	8.23e-222	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
CIOPPAPO_01734	1.83e-278	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CIOPPAPO_01735	5.78e-76	-	-	-	S	-	-	-	3D domain
CIOPPAPO_01736	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
CIOPPAPO_01737	1.21e-213	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CIOPPAPO_01738	1.19e-151	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CIOPPAPO_01739	0.0	-	-	-	V	-	-	-	MatE
CIOPPAPO_01740	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
CIOPPAPO_01741	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
CIOPPAPO_01742	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
CIOPPAPO_01743	0.0	uidA	3.2.1.31	-	G	ko:K01195	ko00040,ko00531,ko00860,ko00944,ko00983,ko01100,ko01110,ko04142,map00040,map00531,map00860,map00944,map00983,map01100,map01110,map04142	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 2 family
CIOPPAPO_01744	0.0	uxuB	1.1.1.57	-	G	ko:K00040	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Mannitol dehydrogenase C-terminal domain
CIOPPAPO_01745	1.94e-212	yqhA	-	-	G	-	-	-	Aldose 1-epimerase
CIOPPAPO_01746	6.14e-155	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
CIOPPAPO_01747	1.16e-239	-	-	-	C	-	-	-	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CIOPPAPO_01748	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
CIOPPAPO_01749	1.94e-216	gntZ	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
CIOPPAPO_01750	3.03e-166	-	-	-	K	-	-	-	FCD domain
CIOPPAPO_01751	9.95e-270	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
CIOPPAPO_01752	5.25e-234	exuR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein domain
CIOPPAPO_01753	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
CIOPPAPO_01754	0.0	-	5.1.2.7	-	S	ko:K21619	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	tagaturonate epimerase
CIOPPAPO_01755	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
CIOPPAPO_01756	3.23e-288	-	-	-	S	-	-	-	module of peptide synthetase
CIOPPAPO_01758	0.0	-	-	-	EGP	-	-	-	Major Facilitator
CIOPPAPO_01760	2.17e-27	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
CIOPPAPO_01761	1.89e-69	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
CIOPPAPO_01762	1.26e-175	-	-	-	-	-	-	-	-
CIOPPAPO_01763	4.42e-118	ebsC	-	-	J	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CIOPPAPO_01764	8.67e-170	gntR1	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
CIOPPAPO_01765	4.94e-142	zmp3	-	-	O	-	-	-	Zinc-dependent metalloprotease
CIOPPAPO_01766	1.43e-101	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CIOPPAPO_01767	9.05e-93	-	-	-	-	-	-	-	-
CIOPPAPO_01769	1.49e-175	agrA	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
CIOPPAPO_01770	7.55e-256	pltK	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
CIOPPAPO_01771	7.3e-266	-	-	-	T	-	-	-	protein histidine kinase activity
CIOPPAPO_01772	3.36e-165	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
CIOPPAPO_01774	4.41e-215	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
CIOPPAPO_01775	1.4e-99	uspA3	-	-	T	-	-	-	universal stress protein
CIOPPAPO_01776	2.59e-130	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CIOPPAPO_01777	3.5e-221	-	-	-	EGP	-	-	-	Major Facilitator
CIOPPAPO_01778	3.84e-65	-	-	-	K	-	-	-	transcriptional regulator
CIOPPAPO_01779	0.0	oppA1	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CIOPPAPO_01780	3.95e-224	oppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CIOPPAPO_01781	1.14e-229	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CIOPPAPO_01782	2.29e-227	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CIOPPAPO_01783	3.76e-244	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CIOPPAPO_01784	1.1e-102	-	-	-	K	-	-	-	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
CIOPPAPO_01785	4.97e-249	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
CIOPPAPO_01786	8.07e-91	-	-	-	-	-	-	-	-
CIOPPAPO_01787	4.05e-64	-	-	-	-	-	-	-	-
CIOPPAPO_01790	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
CIOPPAPO_01791	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Xylulose kinase
CIOPPAPO_01792	1.1e-285	xylT	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
CIOPPAPO_01793	4.46e-181	budC	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
CIOPPAPO_01794	9.91e-87	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
CIOPPAPO_01795	0.0	-	-	-	S	-	-	-	membrane
CIOPPAPO_01796	2.15e-116	usp5	-	-	T	-	-	-	universal stress protein
CIOPPAPO_01797	9.2e-125	yxkA	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
CIOPPAPO_01798	2.14e-279	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
CIOPPAPO_01799	1.11e-161	-	-	-	P	ko:K10716	-	ko00000,ko02000	Ion channel
CIOPPAPO_01800	2.16e-77	-	-	-	-	-	-	-	-
CIOPPAPO_01801	2.43e-214	-	-	-	C	-	-	-	Aldo keto reductase
CIOPPAPO_01802	3.82e-91	-	-	-	-	-	-	-	-
CIOPPAPO_01803	2.7e-121	-	-	-	S	-	-	-	Acetyltransferase (GNAT) family
CIOPPAPO_01804	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
CIOPPAPO_01805	1.46e-242	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
CIOPPAPO_01806	2.17e-241	idhA	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CIOPPAPO_01807	0.0	yufL	2.7.13.3	-	T	ko:K02476,ko:K11614	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Single cache domain 3
CIOPPAPO_01808	4.59e-159	dctR	-	-	K	ko:K02475,ko:K11692	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
CIOPPAPO_01809	4.74e-276	-	-	-	S	-	-	-	ABC-2 family transporter protein
CIOPPAPO_01810	5.14e-131	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_01811	3.86e-157	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
CIOPPAPO_01812	4.36e-98	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 28 family
CIOPPAPO_01813	7.5e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
CIOPPAPO_01814	1.24e-108	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
CIOPPAPO_01816	3.56e-131	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
CIOPPAPO_01817	1.33e-106	padR	-	-	K	-	-	-	Virulence activator alpha C-term
CIOPPAPO_01818	2.86e-97	-	-	-	S	ko:K02348	-	ko00000	Gnat family
CIOPPAPO_01819	5.75e-103	yybA	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_01823	5.26e-96	-	-	-	-	-	-	-	-
CIOPPAPO_01824	1.94e-124	-	-	-	P	-	-	-	Cadmium resistance transporter
CIOPPAPO_01825	5.49e-156	-	-	-	K	ko:K03709	-	ko00000,ko03000	Helix-turn-helix diphteria tox regulatory element
CIOPPAPO_01826	1.13e-93	usp1	-	-	T	-	-	-	Universal stress protein family
CIOPPAPO_01827	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
CIOPPAPO_01828	8.14e-239	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CIOPPAPO_01829	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CIOPPAPO_01830	1.09e-307	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CIOPPAPO_01831	1.6e-155	-	-	-	GM	-	-	-	NmrA-like family
CIOPPAPO_01832	7.92e-128	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_01833	3.41e-231	-	-	-	D	ko:K06889	-	ko00000	Alpha beta
CIOPPAPO_01834	1.57e-188	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CIOPPAPO_01835	1.86e-211	-	-	-	I	-	-	-	Alpha beta
CIOPPAPO_01836	0.0	-	-	-	O	-	-	-	Pro-kumamolisin, activation domain
CIOPPAPO_01837	4.75e-149	-	-	-	S	-	-	-	Membrane
CIOPPAPO_01838	3.27e-171	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
CIOPPAPO_01839	1.68e-50	-	-	-	-	-	-	-	-
CIOPPAPO_01840	5.18e-147	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
CIOPPAPO_01841	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CIOPPAPO_01843	1.82e-96	ssuB	-	-	P	ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
CIOPPAPO_01844	1.86e-147	ssuC	-	-	U	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CIOPPAPO_01845	1.33e-252	-	-	-	M	-	-	-	NlpC/P60 family
CIOPPAPO_01846	3.08e-208	-	-	-	G	-	-	-	Peptidase_C39 like family
CIOPPAPO_01847	3.4e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
CIOPPAPO_01848	4.22e-70	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
CIOPPAPO_01849	7.01e-116	-	-	-	S	-	-	-	Protein of unknown function (DUF1700)
CIOPPAPO_01850	5.75e-193	-	-	-	S	-	-	-	Putative adhesin
CIOPPAPO_01851	6.2e-240	dus	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CIOPPAPO_01852	2.04e-275	fabV	1.3.1.44, 1.3.1.9	-	I	ko:K00209	ko00061,ko00650,ko01100,ko01120,ko01200,ko01212,map00061,map00650,map01100,map01120,map01200,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
CIOPPAPO_01853	1.31e-93	-	-	-	C	-	-	-	Flavodoxin
CIOPPAPO_01854	4.02e-126	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CIOPPAPO_01855	3.69e-313	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CIOPPAPO_01856	1.17e-143	-	-	-	-	-	-	-	-
CIOPPAPO_01857	1.54e-88	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
CIOPPAPO_01858	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
CIOPPAPO_01859	1.86e-286	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
CIOPPAPO_01860	5.3e-239	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CIOPPAPO_01861	7.2e-89	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	AsnC family
CIOPPAPO_01862	4.68e-208	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_01863	0.0	-	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
CIOPPAPO_01865	1.56e-257	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
CIOPPAPO_01866	5.19e-127	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
CIOPPAPO_01867	1.12e-109	-	-	-	K	-	-	-	MarR family
CIOPPAPO_01868	0.0	pacL1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CIOPPAPO_01869	9.21e-14	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CIOPPAPO_01870	8.33e-30	-	-	-	-	-	-	-	-
CIOPPAPO_01871	4.98e-111	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CIOPPAPO_01872	5.82e-20	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CIOPPAPO_01874	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CIOPPAPO_01875	9.03e-192	-	-	-	-	-	-	-	-
CIOPPAPO_01876	2.28e-138	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
CIOPPAPO_01877	3.85e-151	-	-	-	S	-	-	-	Elongation factor G-binding protein, N-terminal
CIOPPAPO_01878	3.35e-214	-	-	-	EG	-	-	-	EamA-like transporter family
CIOPPAPO_01879	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
CIOPPAPO_01880	1.42e-102	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
CIOPPAPO_01881	1.52e-282	dacA2	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
CIOPPAPO_01882	1.16e-203	morA	-	-	S	-	-	-	reductase
CIOPPAPO_01883	0.0	copA	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
CIOPPAPO_01884	2.97e-83	-	-	-	S	-	-	-	Cupredoxin-like domain
CIOPPAPO_01886	4.01e-200	icaB	-	-	G	-	-	-	Polysaccharide deacetylase
CIOPPAPO_01887	1.52e-200	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
CIOPPAPO_01888	9.55e-243	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CIOPPAPO_01889	0.0	oatA	-	-	I	-	-	-	Acyltransferase
CIOPPAPO_01890	2.48e-153	-	-	-	-	-	-	-	-
CIOPPAPO_01891	0.0	l1n	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CIOPPAPO_01892	8.86e-133	-	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CIOPPAPO_01893	1.14e-88	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
CIOPPAPO_01894	2.88e-47	-	-	-	-	-	-	-	-
CIOPPAPO_01895	8.98e-122	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
CIOPPAPO_01896	5.63e-316	xylP1	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
CIOPPAPO_01897	1.16e-129	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
CIOPPAPO_01898	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
CIOPPAPO_01899	5.02e-87	yodA	-	-	S	-	-	-	Tautomerase enzyme
CIOPPAPO_01900	0.0	-	-	-	-	-	-	-	-
CIOPPAPO_01901	4.22e-302	-	-	-	-	-	-	-	-
CIOPPAPO_01902	3.23e-141	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CIOPPAPO_01903	9.67e-222	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
CIOPPAPO_01904	5.65e-136	opuCB	-	-	E	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CIOPPAPO_01905	1.41e-285	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_01906	1.03e-58	-	-	-	-	-	-	-	-
CIOPPAPO_01907	2.53e-283	-	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
CIOPPAPO_01908	4.32e-233	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
CIOPPAPO_01909	4.07e-292	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
CIOPPAPO_01910	8.04e-165	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
CIOPPAPO_01911	0.0	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CIOPPAPO_01912	7.8e-238	ykoT	-	-	M	-	-	-	Glycosyl transferase family 2
CIOPPAPO_01913	1.23e-308	-	-	-	M	ko:K07273	-	ko00000	hydrolase, family 25
CIOPPAPO_01914	1.6e-133	-	-	-	-	-	-	-	-
CIOPPAPO_01915	1.3e-264	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
CIOPPAPO_01916	1.17e-272	yclI	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
CIOPPAPO_01917	1.98e-155	vex2	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
CIOPPAPO_01918	0.0	malL	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
CIOPPAPO_01919	2.16e-75	-	-	-	K	-	-	-	Winged helix-turn-helix DNA-binding
CIOPPAPO_01920	3.81e-173	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
CIOPPAPO_01921	2.82e-207	-	-	-	P	-	-	-	CorA-like Mg2+ transporter protein
CIOPPAPO_01922	0.0	pox2	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
CIOPPAPO_01923	3.7e-96	-	-	-	-	-	-	-	-
CIOPPAPO_01924	3.02e-57	-	-	-	-	-	-	-	-
CIOPPAPO_01925	3.69e-285	hpk2	-	-	T	-	-	-	Histidine kinase
CIOPPAPO_01926	1.19e-163	rrp2	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
CIOPPAPO_01927	8.81e-44	-	-	-	-	-	-	-	-
CIOPPAPO_01928	2.5e-146	-	-	-	GM	-	-	-	NAD(P)H-binding
CIOPPAPO_01929	2.19e-290	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
CIOPPAPO_01930	1.7e-117	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CIOPPAPO_01931	4.61e-132	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_01932	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
CIOPPAPO_01933	9.58e-129	-	-	-	K	-	-	-	Bacterial transcriptional regulator
CIOPPAPO_01934	8.46e-08	-	-	-	-	-	-	-	-
CIOPPAPO_01935	1.6e-185	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
CIOPPAPO_01936	9.89e-175	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
CIOPPAPO_01937	1.05e-162	kdgT	-	-	P	ko:K02526	-	ko00000,ko02000	2-keto-3-deoxygluconate permease
CIOPPAPO_01938	8.22e-140	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
CIOPPAPO_01939	2.71e-103	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
CIOPPAPO_01940	2.51e-50	-	-	-	-	-	-	-	-
CIOPPAPO_01941	2.18e-165	-	1.1.1.53	-	IQ	ko:K00038	ko00140,ko01100,map00140,map01100	ko00000,ko00001,ko01000	reductase
CIOPPAPO_01942	1.04e-305	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
CIOPPAPO_01943	1.29e-197	degV	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CIOPPAPO_01944	0.0	nox	-	-	C	-	-	-	NADH oxidase
CIOPPAPO_01945	6.89e-75	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
CIOPPAPO_01946	1.11e-50	yrkD	-	-	S	-	-	-	Metal-sensitive transcriptional repressor
CIOPPAPO_01947	2.58e-85	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CIOPPAPO_01948	6.12e-76	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CIOPPAPO_01949	2.67e-189	-	-	-	-	-	-	-	-
CIOPPAPO_01950	1.36e-208	-	-	-	I	-	-	-	Carboxylesterase family
CIOPPAPO_01951	4.14e-113	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CIOPPAPO_01952	2.73e-202	-	-	-	-	-	-	-	-
CIOPPAPO_01953	9.51e-317	pts14C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CIOPPAPO_01954	5.15e-215	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CIOPPAPO_01955	5.07e-200	lysR5	-	-	K	-	-	-	LysR substrate binding domain
CIOPPAPO_01956	4.38e-183	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
CIOPPAPO_01957	1.2e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF1634)
CIOPPAPO_01958	7.15e-179	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
CIOPPAPO_01959	1.28e-293	mdtG	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
CIOPPAPO_01960	1.08e-124	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
CIOPPAPO_01961	2.36e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
CIOPPAPO_01962	2.46e-229	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
CIOPPAPO_01964	0.0	-	-	-	S	-	-	-	membrane
CIOPPAPO_01965	1.54e-153	ciaR	-	-	K	ko:K14983	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
CIOPPAPO_01966	3.44e-298	ciaH	2.7.13.3	-	T	ko:K14982	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
CIOPPAPO_01967	2.31e-230	malR1	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
CIOPPAPO_01968	0.0	malT	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
CIOPPAPO_01969	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
CIOPPAPO_01970	6.05e-98	-	-	-	-	-	-	-	-
CIOPPAPO_01971	2.39e-55	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CIOPPAPO_01972	9.66e-193	galM1	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
CIOPPAPO_01973	1.34e-194	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CIOPPAPO_01974	7.76e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CIOPPAPO_01975	1.7e-84	-	-	-	K	-	-	-	MarR family
CIOPPAPO_01976	0.0	-	-	-	M	-	-	-	Parallel beta-helix repeats
CIOPPAPO_01977	3.14e-94	-	-	-	P	-	-	-	ArsC family
CIOPPAPO_01978	3.12e-176	lytE	-	-	M	-	-	-	NlpC/P60 family
CIOPPAPO_01979	5.16e-176	-	-	-	K	-	-	-	acetyltransferase
CIOPPAPO_01980	0.0	-	-	-	E	-	-	-	dipeptidase activity
CIOPPAPO_01981	3.64e-122	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
CIOPPAPO_01982	2.2e-160	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
CIOPPAPO_01983	7.05e-171	fabG1	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
CIOPPAPO_01984	2.21e-194	-	-	-	GM	-	-	-	NmrA-like family
CIOPPAPO_01985	1.8e-93	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_01986	0.0	tagB	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
CIOPPAPO_01987	1.79e-217	-	-	-	-	-	-	-	-
CIOPPAPO_01988	3.95e-82	ytcD	-	-	K	-	-	-	Transcriptional regulator, HxlR family
CIOPPAPO_01989	4.34e-264	ytbD	-	-	EGP	ko:K19577	-	ko00000,ko02000	Major Facilitator
CIOPPAPO_01990	6.14e-233	ydhF	-	-	S	-	-	-	Aldo keto reductase
CIOPPAPO_01991	7.68e-174	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_01992	0.0	-	-	-	Q	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
CIOPPAPO_01993	2.35e-80	-	-	-	K	-	-	-	Transcriptional regulator, GntR family
CIOPPAPO_01994	4.75e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CIOPPAPO_01995	2.34e-287	-	-	-	M	-	-	-	Collagen binding domain
CIOPPAPO_01996	0.0	cadA	-	-	P	-	-	-	P-type ATPase
CIOPPAPO_01997	7.09e-153	-	-	-	S	-	-	-	SNARE associated Golgi protein
CIOPPAPO_01998	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
CIOPPAPO_01999	2.02e-69	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
CIOPPAPO_02000	1.08e-132	cadD	-	-	P	-	-	-	Cadmium resistance transporter
CIOPPAPO_02001	9.51e-209	-	-	-	S	-	-	-	Conserved hypothetical protein 698
CIOPPAPO_02002	2.58e-198	-	-	-	K	-	-	-	LysR substrate binding domain
CIOPPAPO_02003	1.07e-266	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	transporter
CIOPPAPO_02004	7.78e-200	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CIOPPAPO_02005	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
CIOPPAPO_02006	2.38e-212	oroP	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Putative inner membrane exporter, YdcZ
CIOPPAPO_02007	2.3e-226	iunH5	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
CIOPPAPO_02008	5.19e-31	-	-	-	-	-	-	-	-
CIOPPAPO_02009	0.0	-	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
CIOPPAPO_02010	3.69e-169	-	-	-	S	-	-	-	B3/4 domain
CIOPPAPO_02011	1.36e-156	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
CIOPPAPO_02012	5.31e-82	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
CIOPPAPO_02013	1.03e-205	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_02014	7.95e-222	-	-	-	-	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	-
CIOPPAPO_02015	6.77e-247	-	-	-	KT	ko:K02647	-	ko00000,ko03000	Putative sugar diacid recognition
CIOPPAPO_02016	6.67e-271	yojA	-	-	EG	ko:K03299	-	ko00000,ko02000	GntP family permease
CIOPPAPO_02017	5.11e-265	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
CIOPPAPO_02018	0.0	ydbT	-	-	S	ko:K08981	-	ko00000	Bacterial PH domain
CIOPPAPO_02019	1.33e-110	ydbS	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
CIOPPAPO_02020	1.73e-102	-	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside 2-deoxyribosyltransferase
CIOPPAPO_02021	0.0	-	-	-	U	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
CIOPPAPO_02022	2.65e-48	-	-	-	-	-	-	-	-
CIOPPAPO_02023	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
CIOPPAPO_02024	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
CIOPPAPO_02025	1.66e-75	-	-	-	K	-	-	-	Winged helix DNA-binding domain
CIOPPAPO_02026	2.97e-41	-	-	-	-	-	-	-	-
CIOPPAPO_02027	2.55e-304	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
CIOPPAPO_02028	1.86e-306	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CIOPPAPO_02030	4.53e-122	-	-	-	I	-	-	-	NUDIX domain
CIOPPAPO_02031	5.69e-147	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
CIOPPAPO_02032	1.79e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
CIOPPAPO_02033	2.93e-205	ropB	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CIOPPAPO_02034	1.1e-278	-	-	-	EGP	-	-	-	Transmembrane secretion effector
CIOPPAPO_02035	0.0	gshR	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
CIOPPAPO_02036	2.98e-49	ygbF	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
CIOPPAPO_02038	2.14e-260	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
CIOPPAPO_02039	1.54e-47	-	-	-	-	-	-	-	-
CIOPPAPO_02040	9.4e-178	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
CIOPPAPO_02041	3.74e-293	gntT	-	-	EG	-	-	-	Citrate transporter
CIOPPAPO_02042	1.38e-226	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
CIOPPAPO_02043	5.45e-138	-	4.1.2.43	-	G	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase HUMPS family
CIOPPAPO_02044	2.02e-113	hxlB	5.3.1.27	-	M	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	sugar phosphate isomerase involved in capsule formation
CIOPPAPO_02045	3e-225	kdgR	-	-	K	ko:K02525	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
CIOPPAPO_02046	1.92e-67	-	-	-	-	-	-	-	-
CIOPPAPO_02047	2.83e-109	-	-	-	-	-	-	-	-
CIOPPAPO_02048	0.0	-	-	-	L	-	-	-	DNA helicase
CIOPPAPO_02049	1.16e-243	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CIOPPAPO_02050	5.35e-217	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
CIOPPAPO_02051	1.78e-284	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
CIOPPAPO_02052	8.05e-231	-	-	-	-	-	-	-	-
CIOPPAPO_02053	2.4e-167	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
CIOPPAPO_02054	1.15e-64	-	-	-	-	-	-	-	-
CIOPPAPO_02055	2.43e-205	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
CIOPPAPO_02056	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CIOPPAPO_02057	1.63e-187	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
CIOPPAPO_02058	4.75e-126	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CIOPPAPO_02059	8.13e-207	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CIOPPAPO_02060	1.14e-48	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
CIOPPAPO_02061	3.2e-207	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CIOPPAPO_02062	3.94e-144	ung2	-	-	L	-	-	-	Uracil-DNA glycosylase
CIOPPAPO_02063	0.0	yicI	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
CIOPPAPO_02064	0.0	xylP	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
CIOPPAPO_02065	2.01e-266	xylR	-	-	GK	-	-	-	ROK family
CIOPPAPO_02066	0.0	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CIOPPAPO_02067	2.61e-207	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
CIOPPAPO_02068	1.13e-113	-	-	-	-	-	-	-	-
CIOPPAPO_02070	6.28e-70	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
CIOPPAPO_02071	3.82e-113	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CIOPPAPO_02072	2e-108	-	-	-	KTV	ko:K01990	-	ko00000,ko00002,ko02000	abc transporter atp-binding protein
CIOPPAPO_02073	5.09e-218	-	-	-	S	ko:K06889	-	ko00000	Prolyl oligopeptidase family
CIOPPAPO_02074	1.37e-220	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CIOPPAPO_02075	1.19e-167	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
CIOPPAPO_02076	2.96e-173	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
CIOPPAPO_02079	1.69e-184	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
CIOPPAPO_02080	2.19e-307	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CIOPPAPO_02081	2.8e-229	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CIOPPAPO_02082	9e-74	-	-	-	S	-	-	-	Domain of unknown function (DUF3899)
CIOPPAPO_02083	1.06e-90	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CIOPPAPO_02084	1.81e-167	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
CIOPPAPO_02085	0.0	xpkA	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
CIOPPAPO_02086	1.23e-184	yxeH	-	-	S	-	-	-	hydrolase
CIOPPAPO_02087	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
CIOPPAPO_02088	7.71e-192	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
CIOPPAPO_02089	1.73e-102	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
CIOPPAPO_02090	2.18e-77	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
CIOPPAPO_02091	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CIOPPAPO_02092	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
CIOPPAPO_02093	1.92e-259	-	-	-	-	-	-	-	-
CIOPPAPO_02094	9.42e-95	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_02095	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
CIOPPAPO_02096	9.73e-165	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Belongs to the alpha-acetolactate decarboxylase family
CIOPPAPO_02097	3e-219	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CIOPPAPO_02098	2e-301	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CIOPPAPO_02099	3.24e-57	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
CIOPPAPO_02100	8.23e-157	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
CIOPPAPO_02102	8.03e-12	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
CIOPPAPO_02104	1.48e-89	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
CIOPPAPO_02107	4.47e-40	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
CIOPPAPO_02108	1.95e-141	-	-	-	S	-	-	-	Cell surface protein
CIOPPAPO_02109	4.42e-127	XK27_00720	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	regulation of response to stimulus
CIOPPAPO_02110	3.06e-17	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
CIOPPAPO_02111	4.63e-315	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
CIOPPAPO_02112	2.06e-108	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CIOPPAPO_02113	2.17e-127	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
CIOPPAPO_02114	1.42e-192	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
CIOPPAPO_02115	7.79e-192	-	-	-	-	-	-	-	-
CIOPPAPO_02116	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CIOPPAPO_02117	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
CIOPPAPO_02118	5.58e-270	-	-	-	S	-	-	-	nuclear-transcribed mRNA catabolic process, no-go decay
CIOPPAPO_02119	1.37e-83	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CIOPPAPO_02120	6.52e-270	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CIOPPAPO_02122	1.45e-80	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
CIOPPAPO_02123	7.47e-148	-	-	-	S	-	-	-	(CBS) domain
CIOPPAPO_02125	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CIOPPAPO_02126	1.13e-224	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CIOPPAPO_02127	1.23e-130	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CIOPPAPO_02128	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CIOPPAPO_02129	0.0	yabM	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CIOPPAPO_02130	7.09e-53	yabO	-	-	J	-	-	-	S4 domain protein
CIOPPAPO_02131	9.05e-58	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
CIOPPAPO_02132	4.64e-124	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
CIOPPAPO_02133	0.0	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CIOPPAPO_02134	5.23e-125	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CIOPPAPO_02135	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CIOPPAPO_02136	2.74e-209	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CIOPPAPO_02137	9.18e-242	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CIOPPAPO_02142	3.2e-70	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CIOPPAPO_02143	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
CIOPPAPO_02144	4.35e-192	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CIOPPAPO_02147	1.79e-175	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CIOPPAPO_02148	3.82e-277	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CIOPPAPO_02149	2.79e-162	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
CIOPPAPO_02150	7.88e-121	yfbM	-	-	K	-	-	-	FR47-like protein
CIOPPAPO_02151	2.14e-177	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
CIOPPAPO_02152	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CIOPPAPO_02153	9.45e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
CIOPPAPO_02154	3.12e-95	-	-	-	-	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	-
CIOPPAPO_02155	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
CIOPPAPO_02156	1.44e-114	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
CIOPPAPO_02157	2.07e-203	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CIOPPAPO_02159	1.69e-192	-	4.1.1.52	-	S	ko:K22213	-	ko00000,ko01000	Amidohydrolase
CIOPPAPO_02160	7.34e-158	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CIOPPAPO_02161	4.99e-81	-	-	-	K	-	-	-	transcriptional regulator
CIOPPAPO_02162	3.74e-130	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
CIOPPAPO_02163	1.43e-96	-	-	-	K	-	-	-	MarR family
CIOPPAPO_02164	2.06e-312	dinF	-	-	V	-	-	-	MatE
CIOPPAPO_02165	1.99e-138	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
CIOPPAPO_02166	1.31e-71	levD	2.7.1.191, 2.7.1.202	-	G	ko:K02793,ko:K02794,ko:K11194	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
CIOPPAPO_02167	1.72e-78	manX	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CIOPPAPO_02168	1.13e-175	manM	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
CIOPPAPO_02169	5.27e-197	manN	-	-	G	ko:K02796,ko:K02815	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
CIOPPAPO_02170	2.26e-225	ydbI	-	-	K	-	-	-	AI-2E family transporter
CIOPPAPO_02171	4.33e-214	-	-	-	T	-	-	-	diguanylate cyclase
CIOPPAPO_02172	4.68e-152	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
CIOPPAPO_02173	2.02e-131	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CIOPPAPO_02174	0.0	XK27_06930	-	-	V	ko:K01421	-	ko00000	domain protein
CIOPPAPO_02175	3.46e-212	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CIOPPAPO_02176	3.4e-255	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CIOPPAPO_02177	8.11e-212	mleP2	-	-	S	ko:K07088	-	ko00000	Transporter, auxin efflux carrier (AEC) family protein
CIOPPAPO_02178	2.11e-228	-	-	-	EG	-	-	-	EamA-like transporter family
CIOPPAPO_02179	5.67e-157	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CIOPPAPO_02180	1.68e-293	-	-	-	V	-	-	-	Beta-lactamase
CIOPPAPO_02181	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CIOPPAPO_02183	1.63e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CIOPPAPO_02184	4.07e-74	-	-	-	-	-	-	-	-
CIOPPAPO_02185	6.13e-128	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
CIOPPAPO_02186	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CIOPPAPO_02187	3e-272	yacL	-	-	S	-	-	-	domain protein
CIOPPAPO_02188	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CIOPPAPO_02189	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CIOPPAPO_02190	7.28e-92	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CIOPPAPO_02191	2.12e-177	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CIOPPAPO_02192	1.04e-116	yacP	-	-	S	ko:K06962	-	ko00000	YacP-like NYN domain
CIOPPAPO_02193	1.37e-129	sigH	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Sigma-70 region 2
CIOPPAPO_02194	1.27e-34	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CIOPPAPO_02195	1.61e-127	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
CIOPPAPO_02196	4.14e-94	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CIOPPAPO_02197	1.75e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CIOPPAPO_02198	1.3e-110	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CIOPPAPO_02199	7.9e-74	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CIOPPAPO_02200	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CIOPPAPO_02201	1.54e-141	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
CIOPPAPO_02202	2.97e-213	-	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	3-hydroxyacyl-CoA dehydrogenase
CIOPPAPO_02203	1.8e-248	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CIOPPAPO_02204	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CIOPPAPO_02205	1.92e-50	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
CIOPPAPO_02206	1.03e-140	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
CIOPPAPO_02207	1.17e-118	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CIOPPAPO_02208	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CIOPPAPO_02209	6.48e-56	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CIOPPAPO_02210	7.57e-141	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CIOPPAPO_02211	2.48e-52	yaaL	-	-	S	-	-	-	Protein of unknown function (DUF2508)
CIOPPAPO_02212	7.79e-145	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CIOPPAPO_02213	1.44e-72	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
CIOPPAPO_02214	2.19e-227	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CIOPPAPO_02215	4.38e-60	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
CIOPPAPO_02216	7.84e-208	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CIOPPAPO_02217	1.15e-181	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
CIOPPAPO_02218	5.58e-161	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
CIOPPAPO_02219	9.52e-141	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
CIOPPAPO_02220	1.74e-250	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CIOPPAPO_02221	1.27e-272	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
CIOPPAPO_02222	8.86e-62	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
CIOPPAPO_02223	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
CIOPPAPO_02224	3.29e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CIOPPAPO_02225	1.56e-60	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CIOPPAPO_02226	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CIOPPAPO_02227	0.0	ydaO	-	-	E	-	-	-	amino acid
CIOPPAPO_02228	1.8e-180	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	LrgB-like family
CIOPPAPO_02229	1.17e-91	lrgA	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	LrgA family
CIOPPAPO_02230	6.19e-243	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
CIOPPAPO_02231	6.56e-145	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
CIOPPAPO_02232	0.0	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
CIOPPAPO_02233	6.35e-157	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
CIOPPAPO_02234	3.5e-126	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CIOPPAPO_02235	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CIOPPAPO_02236	6.27e-234	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CIOPPAPO_02237	2.32e-280	minJ	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
CIOPPAPO_02238	2.49e-166	phoP	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
CIOPPAPO_02239	2.81e-313	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CIOPPAPO_02240	2.52e-204	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
CIOPPAPO_02241	8.95e-201	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
CIOPPAPO_02242	3.4e-198	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
CIOPPAPO_02243	5.46e-194	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CIOPPAPO_02244	6.12e-180	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CIOPPAPO_02245	1.96e-154	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
CIOPPAPO_02246	5.88e-72	-	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
CIOPPAPO_02247	2.06e-49	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
CIOPPAPO_02248	6.76e-218	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CIOPPAPO_02249	2.21e-195	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CIOPPAPO_02250	6.13e-234	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
CIOPPAPO_02251	1.59e-211	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CIOPPAPO_02252	3.26e-226	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CIOPPAPO_02254	3.17e-149	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
CIOPPAPO_02255	3.57e-120	-	-	-	K	-	-	-	acetyltransferase
CIOPPAPO_02256	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CIOPPAPO_02257	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CIOPPAPO_02258	2.03e-118	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
CIOPPAPO_02259	5.33e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
CIOPPAPO_02260	7.01e-244	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
CIOPPAPO_02261	4.23e-217	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
CIOPPAPO_02262	5.95e-133	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CIOPPAPO_02263	5.75e-93	-	-	-	K	-	-	-	LytTr DNA-binding domain
CIOPPAPO_02264	2.26e-154	-	-	-	S	-	-	-	membrane
CIOPPAPO_02266	3.44e-139	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CIOPPAPO_02268	1.63e-236	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
CIOPPAPO_02269	8.53e-245	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CIOPPAPO_02270	7.88e-287	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
CIOPPAPO_02271	9.05e-178	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CIOPPAPO_02272	2.84e-316	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CIOPPAPO_02274	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CIOPPAPO_02275	1.06e-44	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CIOPPAPO_02276	1.38e-176	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
CIOPPAPO_02277	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CIOPPAPO_02278	4.3e-106	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CIOPPAPO_02279	1.18e-169	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_02280	6e-130	-	-	-	-	-	-	-	-
CIOPPAPO_02281	3.18e-180	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CIOPPAPO_02282	7.67e-226	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
CIOPPAPO_02283	7.73e-109	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
CIOPPAPO_02284	2.61e-112	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
CIOPPAPO_02285	7.88e-245	tas3	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
CIOPPAPO_02286	6.15e-132	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CIOPPAPO_02287	9.51e-194	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
CIOPPAPO_02288	2.34e-210	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
CIOPPAPO_02289	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CIOPPAPO_02290	1.34e-158	-	-	-	S	-	-	-	Protein of unknown function (DUF1361)
CIOPPAPO_02291	5.67e-196	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CIOPPAPO_02292	1.32e-193	ybbR	-	-	S	-	-	-	YbbR-like protein
CIOPPAPO_02293	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CIOPPAPO_02294	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CIOPPAPO_02295	3.46e-18	-	-	-	-	-	-	-	-
CIOPPAPO_02296	4.46e-167	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CIOPPAPO_02297	0.0	-	-	CBM50	NU	ko:K02395,ko:K19223	-	ko00000,ko01000,ko01002,ko01011,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CIOPPAPO_02298	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type ATPase
CIOPPAPO_02299	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
CIOPPAPO_02300	1.94e-119	dpsB	-	-	P	-	-	-	Belongs to the Dps family
CIOPPAPO_02301	2.98e-45	copZ	-	-	P	-	-	-	Heavy-metal-associated domain
CIOPPAPO_02302	2.21e-255	tagH	3.6.3.40	-	GM	ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
CIOPPAPO_02303	1.09e-66	-	-	-	-	-	-	-	-
CIOPPAPO_02304	1.2e-130	-	-	-	S	-	-	-	Iron Transport-associated domain
CIOPPAPO_02305	2.88e-255	-	-	-	M	-	-	-	Iron Transport-associated domain
CIOPPAPO_02306	4.64e-145	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
CIOPPAPO_02307	1.52e-207	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
CIOPPAPO_02308	8.57e-222	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CIOPPAPO_02309	3.16e-182	fepC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_02310	3.91e-217	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
CIOPPAPO_02311	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CIOPPAPO_02312	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
CIOPPAPO_02313	1.45e-193	-	-	-	M	ko:K07271	-	ko00000,ko01000	LicD family
CIOPPAPO_02314	8.68e-113	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
CIOPPAPO_02315	8.55e-99	-	-	-	K	-	-	-	Transcriptional regulator
CIOPPAPO_02316	2.39e-34	-	-	-	-	-	-	-	-
CIOPPAPO_02317	3.21e-104	-	-	-	O	-	-	-	OsmC-like protein
CIOPPAPO_02318	2.26e-33	-	-	-	-	-	-	-	-
CIOPPAPO_02320	3.47e-73	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
CIOPPAPO_02321	1.22e-113	-	-	-	-	-	-	-	-
CIOPPAPO_02322	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
CIOPPAPO_02323	4.84e-61	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70 region 2
CIOPPAPO_02324	2.39e-89	-	-	-	S	-	-	-	Sigma factor regulator C-terminal
CIOPPAPO_02325	1.27e-256	-	-	-	E	-	-	-	Bacterial extracellular solute-binding proteins, family 5 Middle
CIOPPAPO_02326	0.0	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
CIOPPAPO_02327	3.52e-264	-	-	-	G	-	-	-	MFS/sugar transport protein
CIOPPAPO_02328	2.74e-152	-	-	-	K	-	-	-	AraC family transcriptional regulator
CIOPPAPO_02329	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Melibiase
CIOPPAPO_02330	9.6e-134	-	-	-	-	-	-	-	-
CIOPPAPO_02331	5.18e-17	-	-	-	-	-	-	-	-
CIOPPAPO_02334	1.15e-189	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
CIOPPAPO_02335	0.0	yclK	-	-	T	-	-	-	Histidine kinase
CIOPPAPO_02336	7.61e-269	ywbD	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	S-adenosylmethionine-dependent methyltransferase
CIOPPAPO_02337	1.06e-198	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
CIOPPAPO_02338	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
CIOPPAPO_02339	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
CIOPPAPO_02340	1.48e-103	tspO	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	TspO/MBR family
CIOPPAPO_02343	2.7e-259	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CIOPPAPO_02349	4.25e-132	-	-	-	L	-	-	-	Bifunctional DNA primase/polymerase, N-terminal
CIOPPAPO_02350	0.0	-	-	-	S	-	-	-	Virulence-associated protein E
CIOPPAPO_02351	2e-72	-	-	-	-	-	-	-	-
CIOPPAPO_02353	8.5e-19	-	-	-	S	-	-	-	Phage head-tail joining protein
CIOPPAPO_02354	4.43e-67	-	-	-	L	ko:K07451	-	ko00000,ko01000,ko02048	Phage-associated protein
CIOPPAPO_02355	1.33e-100	-	-	-	L	-	-	-	overlaps another CDS with the same product name
CIOPPAPO_02356	0.0	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
CIOPPAPO_02358	4.36e-244	-	-	-	S	-	-	-	Phage portal protein
CIOPPAPO_02359	0.0	-	-	-	S	ko:K06904	-	ko00000	Caudovirus prohead serine protease
CIOPPAPO_02360	3.35e-47	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
CIOPPAPO_02361	1.33e-43	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
CIOPPAPO_02362	1.88e-53	-	-	-	-	-	-	-	-
CIOPPAPO_02364	2.09e-217	-	-	-	S	-	-	-	NAD:arginine ADP-ribosyltransferase
CIOPPAPO_02365	4.41e-249	ysdE	-	-	P	-	-	-	Citrate transporter
CIOPPAPO_02366	1.06e-155	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
CIOPPAPO_02367	1.43e-185	-	-	-	T	-	-	-	diguanylate cyclase
CIOPPAPO_02368	5.55e-29	-	-	-	-	-	-	-	-
CIOPPAPO_02369	5.22e-75	-	-	-	-	-	-	-	-
CIOPPAPO_02370	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_02371	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
CIOPPAPO_02372	3.36e-248	ampC	-	-	V	-	-	-	Beta-lactamase
CIOPPAPO_02373	1.29e-172	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
CIOPPAPO_02374	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Mur ligase, middle domain
CIOPPAPO_02375	7.63e-143	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
CIOPPAPO_02376	2.65e-247	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CIOPPAPO_02377	6.34e-193	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CIOPPAPO_02378	1.59e-241	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CIOPPAPO_02379	1.49e-293	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CIOPPAPO_02380	1.06e-145	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CIOPPAPO_02381	1.55e-162	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
CIOPPAPO_02382	7.38e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CIOPPAPO_02383	3.81e-77	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CIOPPAPO_02384	4.44e-117	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CIOPPAPO_02385	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CIOPPAPO_02386	8.79e-208	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CIOPPAPO_02387	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CIOPPAPO_02388	6.38e-88	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
CIOPPAPO_02389	2.25e-45	ywzB	-	-	S	-	-	-	Protein of unknown function (DUF1146)
CIOPPAPO_02390	2.77e-307	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CIOPPAPO_02391	6.85e-230	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
CIOPPAPO_02392	2.23e-69	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
CIOPPAPO_02393	9.66e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
CIOPPAPO_02394	4.52e-282	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
CIOPPAPO_02395	2.71e-66	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
CIOPPAPO_02396	2.65e-184	-	-	-	O	-	-	-	Band 7 protein
CIOPPAPO_02397	8.64e-227	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
CIOPPAPO_02398	5.43e-277	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
CIOPPAPO_02399	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
CIOPPAPO_02400	8.71e-201	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CIOPPAPO_02401	2.12e-107	uspA	-	-	T	-	-	-	universal stress protein
CIOPPAPO_02402	2.05e-52	-	-	-	-	-	-	-	-
CIOPPAPO_02403	3.89e-302	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
CIOPPAPO_02404	7.53e-104	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
CIOPPAPO_02405	1.17e-144	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
CIOPPAPO_02406	6.78e-81	-	-	-	KLT	-	-	-	serine threonine protein kinase
CIOPPAPO_02407	5.96e-139	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CIOPPAPO_02408	1.57e-107	yebR	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
CIOPPAPO_02409	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CIOPPAPO_02410	6.57e-274	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CIOPPAPO_02411	1.27e-290	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CIOPPAPO_02412	2.34e-118	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CIOPPAPO_02413	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CIOPPAPO_02414	0.0	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
CIOPPAPO_02415	9.77e-152	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
CIOPPAPO_02416	1.71e-218	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
CIOPPAPO_02417	6.23e-184	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
CIOPPAPO_02418	3.85e-120	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
CIOPPAPO_02419	8.3e-150	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
CIOPPAPO_02420	1.57e-190	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
CIOPPAPO_02421	5.65e-143	-	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
CIOPPAPO_02422	5.01e-120	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_02423	4.36e-203	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CIOPPAPO_02424	3.08e-302	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
CIOPPAPO_02425	1.33e-311	ymfH	-	-	S	-	-	-	Peptidase M16
CIOPPAPO_02426	5.31e-145	ymfM	-	-	S	ko:K15539	-	ko00000	Domain of unknown function (DUF4115)
CIOPPAPO_02427	5.53e-132	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CIOPPAPO_02428	3e-290	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
CIOPPAPO_02429	3.34e-249	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CIOPPAPO_02431	1.93e-313	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
CIOPPAPO_02432	8.08e-191	ymdB	-	-	S	ko:K02029,ko:K02030,ko:K09769	-	ko00000,ko00002,ko02000	YmdB-like protein
CIOPPAPO_02433	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CIOPPAPO_02434	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CIOPPAPO_02435	3.72e-138	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CIOPPAPO_02436	4.74e-243	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CIOPPAPO_02437	2.79e-254	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CIOPPAPO_02438	3.74e-289	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
CIOPPAPO_02439	8.95e-50	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CIOPPAPO_02440	1.35e-231	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CIOPPAPO_02441	4.32e-229	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
CIOPPAPO_02442	0.0	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
CIOPPAPO_02443	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CIOPPAPO_02444	5.58e-59	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
CIOPPAPO_02445	7.07e-97	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CIOPPAPO_02446	2.47e-68	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
CIOPPAPO_02447	3.82e-52	-	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
CIOPPAPO_02448	4.45e-116	cvpA	-	-	S	-	-	-	Colicin V production protein
CIOPPAPO_02449	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CIOPPAPO_02450	6.22e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
CIOPPAPO_02451	1.4e-117	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
CIOPPAPO_02452	7.98e-188	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
CIOPPAPO_02453	2.53e-139	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CIOPPAPO_02454	2.53e-128	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
CIOPPAPO_02455	2.88e-111	ykuL	-	-	S	-	-	-	(CBS) domain
CIOPPAPO_02457	2.17e-62	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
CIOPPAPO_02458	4.31e-312	-	-	-	U	-	-	-	Major Facilitator Superfamily
CIOPPAPO_02459	2.7e-199	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
CIOPPAPO_02460	3.9e-82	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CIOPPAPO_02461	2.78e-73	-	-	-	-	-	-	-	-
CIOPPAPO_02462	9.99e-270	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CIOPPAPO_02463	7.14e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
CIOPPAPO_02464	5.84e-169	-	-	-	-	-	-	-	-
CIOPPAPO_02465	2.3e-172	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CIOPPAPO_02466	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CIOPPAPO_02467	1.68e-169	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
CIOPPAPO_02468	2.65e-220	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
CIOPPAPO_02469	6.47e-219	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
CIOPPAPO_02470	3.25e-64	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
CIOPPAPO_02471	2.54e-101	-	-	-	-	-	-	-	-
CIOPPAPO_02473	8.38e-98	-	-	-	-	ko:K02248	-	ko00000,ko00002,ko02044	-
CIOPPAPO_02474	5.69e-236	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
CIOPPAPO_02475	2.16e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CIOPPAPO_02476	0.0	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CIOPPAPO_02477	3.3e-199	yeaE	-	-	S	-	-	-	Aldo keto
CIOPPAPO_02478	3.75e-147	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CIOPPAPO_02479	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CIOPPAPO_02480	2.39e-121	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
CIOPPAPO_02481	1.57e-188	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
CIOPPAPO_02482	4.9e-151	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
CIOPPAPO_02483	7.91e-118	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
CIOPPAPO_02484	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
CIOPPAPO_02485	0.0	-	-	-	M	-	-	-	domain protein
CIOPPAPO_02486	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
CIOPPAPO_02487	1.18e-183	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
CIOPPAPO_02488	5.53e-52	ytbE	-	-	S	-	-	-	reductase
CIOPPAPO_02489	2.49e-54	ytbE	-	-	S	-	-	-	reductase
CIOPPAPO_02490	7.58e-80	-	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
CIOPPAPO_02491	1.83e-12	-	-	-	K	-	-	-	transcriptional regulator (MerR family)
CIOPPAPO_02492	1.19e-157	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
CIOPPAPO_02493	5.55e-86	pgpA	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Phosphatidylglycerophosphatase A
CIOPPAPO_02494	3.56e-15	pgpA	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Phosphatidylglycerophosphatase A
CIOPPAPO_02495	4.07e-144	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CIOPPAPO_02496	8.01e-93	yugI	-	-	J	ko:K07570,ko:K07571	-	ko00000	general stress protein
CIOPPAPO_02515	6.06e-295	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
CIOPPAPO_02516	7.02e-119	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
CIOPPAPO_02517	1.02e-175	yhfI	-	-	S	-	-	-	Metallo-beta-lactamase superfamily