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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
NIPEDNLJ_00001	4.7e-155	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_00002	3.65e-122	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_00003	2.93e-297	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
NIPEDNLJ_00004	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
NIPEDNLJ_00005	1.78e-97	-	-	-	F	-	-	-	Nudix hydrolase
NIPEDNLJ_00006	8.55e-129	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
NIPEDNLJ_00007	3.21e-180	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00008	4.26e-107	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
NIPEDNLJ_00009	5.45e-35	-	3.2.1.14	GH18	-	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	-
NIPEDNLJ_00010	1.15e-191	-	-	-	-	-	-	-	-
NIPEDNLJ_00011	1.77e-221	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00012	5.02e-52	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	positive regulation of macromolecule biosynthetic process
NIPEDNLJ_00013	2.14e-123	-	-	-	K	-	-	-	Transcriptional regulator (TetR family)
NIPEDNLJ_00014	8.15e-86	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
NIPEDNLJ_00015	2.87e-237	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
NIPEDNLJ_00016	6.34e-230	-	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NIPEDNLJ_00017	6.08e-13	-	-	-	S	-	-	-	CsbD-like
NIPEDNLJ_00018	1.34e-47	-	-	-	S	-	-	-	Transglycosylase associated protein
NIPEDNLJ_00019	1.33e-293	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NIPEDNLJ_00020	6.69e-162	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
NIPEDNLJ_00021	9.02e-146	-	-	-	S	ko:K03975	-	ko00000	SNARE associated Golgi protein
NIPEDNLJ_00022	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
NIPEDNLJ_00023	4.41e-49	-	-	-	Q	-	-	-	pyridine nucleotide-disulphide oxidoreductase
NIPEDNLJ_00024	2.15e-203	-	-	-	EG	-	-	-	EamA-like transporter family
NIPEDNLJ_00025	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
NIPEDNLJ_00026	8.32e-226	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
NIPEDNLJ_00027	5.67e-278	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
NIPEDNLJ_00029	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
NIPEDNLJ_00030	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00031	5.12e-24	-	-	-	-	-	-	-	-
NIPEDNLJ_00032	3.2e-270	-	-	-	L	-	-	-	helicase
NIPEDNLJ_00033	5.87e-198	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
NIPEDNLJ_00034	6.03e-221	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NIPEDNLJ_00035	8.15e-136	-	-	-	L	-	-	-	Helix-turn-helix domain
NIPEDNLJ_00036	1.05e-153	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
NIPEDNLJ_00042	1.82e-111	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_00043	3.88e-77	-	-	-	L	-	-	-	Resolvase, N terminal domain
NIPEDNLJ_00044	1.79e-172	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
NIPEDNLJ_00045	4.22e-32	allC	3.5.3.9	-	E	ko:K02083	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000,ko01002	Peptidase family M20/M25/M40
NIPEDNLJ_00046	4.82e-61	allC	3.5.3.9	-	E	ko:K02083	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000,ko01002	Peptidase family M20/M25/M40
NIPEDNLJ_00047	0.0	-	-	-	J	-	-	-	Elongation factor G, domain IV
NIPEDNLJ_00049	2.78e-07	-	-	-	S	-	-	-	Domain of unknown function (DUF3173)
NIPEDNLJ_00050	3.04e-104	ydcL	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NIPEDNLJ_00051	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00052	7.98e-25	-	-	-	L	-	-	-	PFAM Transposase DDE domain
NIPEDNLJ_00053	4.63e-29	-	-	-	S	-	-	-	to AA sequence GI 189502478
NIPEDNLJ_00057	4.54e-110	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_00058	9.49e-190	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
NIPEDNLJ_00059	2.01e-22	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
NIPEDNLJ_00060	2.7e-66	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
NIPEDNLJ_00061	4.92e-57	-	-	-	M	-	-	-	Glycosyltransferase like family 2
NIPEDNLJ_00062	4.89e-202	-	-	-	M	-	-	-	family 8
NIPEDNLJ_00063	2.96e-240	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
NIPEDNLJ_00064	8.2e-71	-	-	-	M	-	-	-	family 8
NIPEDNLJ_00065	8.02e-200	-	-	-	M	-	-	-	Glycosyltransferase like family 2
NIPEDNLJ_00066	5.4e-197	-	-	-	M	-	-	-	Glycosyl transferase family 8
NIPEDNLJ_00067	6.97e-166	-	-	-	M	-	-	-	Glycosyltransferase like family 2
NIPEDNLJ_00068	1.39e-14	-	-	-	M	-	-	-	Glycosyltransferase like family 2
NIPEDNLJ_00069	8.91e-77	-	-	-	M	-	-	-	Glycosyltransferase like family 2
NIPEDNLJ_00070	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00071	0.0	arbY	-	-	M	-	-	-	family 8
NIPEDNLJ_00072	6.18e-282	secY2	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	SecY translocase
NIPEDNLJ_00073	0.0	asp1	-	-	S	ko:K12268	-	ko00000,ko02044	Accessory Sec system protein Asp1
NIPEDNLJ_00074	0.0	asp2	-	-	S	ko:K12269	-	ko00000,ko02044	Accessory Sec system GspB-transporter
NIPEDNLJ_00076	0.0	secA2	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NIPEDNLJ_00078	0.0	gtf1	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
NIPEDNLJ_00079	0.0	gtf2	-	-	M	-	-	-	A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
NIPEDNLJ_00080	2.59e-24	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
NIPEDNLJ_00081	9.95e-169	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
NIPEDNLJ_00082	6.11e-94	-	-	-	L	-	-	-	Helix-turn-helix domain
NIPEDNLJ_00083	0.0	ade	-	-	F	-	-	-	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
NIPEDNLJ_00084	1.64e-233	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
NIPEDNLJ_00085	4.03e-208	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko01000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NIPEDNLJ_00086	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
NIPEDNLJ_00087	0.0	-	-	-	G	-	-	-	Major Facilitator Superfamily
NIPEDNLJ_00088	7.22e-31	-	-	-	V	-	-	-	DNA restriction-modification system
NIPEDNLJ_00089	3.48e-73	-	-	-	V	-	-	-	DNA restriction-modification system
NIPEDNLJ_00090	1.88e-71	-	-	-	V	-	-	-	DNA restriction-modification system
NIPEDNLJ_00091	3.63e-289	oxlT	-	-	P	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
NIPEDNLJ_00092	2.33e-203	-	-	-	J	-	-	-	Methyltransferase
NIPEDNLJ_00093	5.18e-114	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
NIPEDNLJ_00094	3.4e-66	-	-	-	S	-	-	-	ParE toxin of type II toxin-antitoxin system, parDE
NIPEDNLJ_00095	2.74e-50	-	-	-	D	-	-	-	Antitoxin component of a toxin-antitoxin (TA) module
NIPEDNLJ_00096	2.85e-250	-	-	-	EGP	-	-	-	Major Facilitator
NIPEDNLJ_00097	2.34e-78	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_00098	1.87e-292	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_00099	1.32e-55	-	-	-	K	-	-	-	PFAM GCN5-related N-acetyltransferase
NIPEDNLJ_00100	6.16e-119	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
NIPEDNLJ_00101	1.04e-231	thiP	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
NIPEDNLJ_00102	3.7e-19	-	-	-	-	-	-	-	-
NIPEDNLJ_00103	2.6e-121	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
NIPEDNLJ_00104	8.86e-138	isp	-	-	L	-	-	-	Transposase
NIPEDNLJ_00105	1.53e-59	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_00106	2.15e-259	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_00107	4.61e-148	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00108	5.75e-52	-	-	-	S	-	-	-	Cytochrome B5
NIPEDNLJ_00109	5.72e-132	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_00110	2.29e-154	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
NIPEDNLJ_00111	9.38e-115	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
NIPEDNLJ_00112	5.28e-203	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
NIPEDNLJ_00114	1.59e-255	tnp2	-	-	L	-	-	-	PFAM Transposase, IS204 IS1001 IS1096 IS1165
NIPEDNLJ_00116	4.43e-214	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00117	1.26e-233	-	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
NIPEDNLJ_00118	4.8e-128	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NIPEDNLJ_00119	5.95e-238	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00120	2.77e-233	-	-	-	-	-	-	-	-
NIPEDNLJ_00121	6.73e-81	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NIPEDNLJ_00122	1.71e-89	-	1.1.1.90	-	C	ko:K00055	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Zn-dependent alcohol dehydrogenases, class III
NIPEDNLJ_00123	5.11e-107	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
NIPEDNLJ_00124	2.32e-126	-	-	-	K	-	-	-	acetyltransferase
NIPEDNLJ_00125	2.06e-236	-	-	-	-	-	-	-	-
NIPEDNLJ_00127	8.72e-172	-	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C-terminal domain protein
NIPEDNLJ_00128	5.71e-204	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
NIPEDNLJ_00129	5.34e-193	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
NIPEDNLJ_00130	7.73e-199	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
NIPEDNLJ_00131	2.48e-174	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NIPEDNLJ_00132	6.09e-162	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
NIPEDNLJ_00133	3.63e-292	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_00134	1.41e-79	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_00135	4.95e-96	-	-	-	-	-	-	-	-
NIPEDNLJ_00136	1.29e-85	-	-	-	-	-	-	-	-
NIPEDNLJ_00138	3.13e-309	-	-	-	M	-	-	-	Glycosyl transferase
NIPEDNLJ_00139	1.2e-284	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
NIPEDNLJ_00140	1.41e-66	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
NIPEDNLJ_00141	3.1e-83	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
NIPEDNLJ_00142	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
NIPEDNLJ_00143	4.77e-305	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
NIPEDNLJ_00144	6.59e-151	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
NIPEDNLJ_00145	1.47e-111	-	-	-	Q	-	-	-	Methyltransferase
NIPEDNLJ_00146	1.62e-294	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
NIPEDNLJ_00147	7.72e-228	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
NIPEDNLJ_00148	8.5e-213	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
NIPEDNLJ_00149	4.14e-121	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
NIPEDNLJ_00150	4.8e-229	-	-	-	S	-	-	-	Conserved hypothetical protein 698
NIPEDNLJ_00151	1.45e-171	-	-	-	I	-	-	-	alpha/beta hydrolase fold
NIPEDNLJ_00152	6.51e-213	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
NIPEDNLJ_00153	5.22e-228	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
NIPEDNLJ_00154	0.0	arcD	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
NIPEDNLJ_00155	0.0	arcT	-	-	E	-	-	-	Dipeptidase
NIPEDNLJ_00156	1.09e-275	-	-	-	EGP	-	-	-	Transporter, major facilitator family protein
NIPEDNLJ_00157	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
NIPEDNLJ_00158	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00159	8.27e-180	-	-	-	V	-	-	-	Beta-lactamase enzyme family
NIPEDNLJ_00160	2.29e-293	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
NIPEDNLJ_00161	5.36e-97	-	-	-	-	-	-	-	-
NIPEDNLJ_00162	3.52e-253	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
NIPEDNLJ_00163	2.33e-29	-	-	-	-	-	-	-	-
NIPEDNLJ_00164	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
NIPEDNLJ_00165	1.22e-204	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_00166	0.0	-	-	-	L	-	-	-	PFAM plasmid pRiA4b ORF-3 family protein
NIPEDNLJ_00167	7.79e-263	adh	1.1.1.1	-	C	ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Zinc-binding alcohol dehydrogenase family protein
NIPEDNLJ_00168	6.76e-143	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NIPEDNLJ_00169	1.44e-202	mleR	-	-	K	-	-	-	LysR family
NIPEDNLJ_00170	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
NIPEDNLJ_00171	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
NIPEDNLJ_00172	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
NIPEDNLJ_00173	1.52e-164	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
NIPEDNLJ_00174	2.64e-283	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
NIPEDNLJ_00175	9.08e-158	citR	-	-	K	-	-	-	sugar-binding domain protein
NIPEDNLJ_00176	1.15e-223	mae	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme, NAD binding domain
NIPEDNLJ_00177	9.38e-188	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
NIPEDNLJ_00178	2.56e-56	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
NIPEDNLJ_00179	3.29e-204	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
NIPEDNLJ_00180	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
NIPEDNLJ_00181	3.34e-195	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
NIPEDNLJ_00182	3.08e-144	-	-	-	I	-	-	-	Alpha/beta hydrolase family
NIPEDNLJ_00183	6.91e-203	-	-	-	K	-	-	-	LysR family
NIPEDNLJ_00184	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
NIPEDNLJ_00185	9.06e-151	-	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
NIPEDNLJ_00186	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
NIPEDNLJ_00187	3.06e-238	-	-	-	I	-	-	-	Alpha beta
NIPEDNLJ_00188	7.62e-132	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
NIPEDNLJ_00189	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NIPEDNLJ_00191	3.31e-207	yjbO	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
NIPEDNLJ_00192	1.79e-158	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
NIPEDNLJ_00193	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
NIPEDNLJ_00194	3.09e-97	-	-	-	K	-	-	-	MerR HTH family regulatory protein
NIPEDNLJ_00195	8.46e-77	-	-	-	-	-	-	-	-
NIPEDNLJ_00196	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NIPEDNLJ_00197	4.69e-281	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
NIPEDNLJ_00198	2.46e-139	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NIPEDNLJ_00199	1.06e-142	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NIPEDNLJ_00200	7.76e-195	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
NIPEDNLJ_00201	1.39e-173	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_00202	4.83e-108	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
NIPEDNLJ_00203	4.12e-137	-	-	-	S	-	-	-	VIT family
NIPEDNLJ_00204	2.1e-151	-	-	-	S	-	-	-	membrane
NIPEDNLJ_00205	1.58e-209	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
NIPEDNLJ_00206	9.06e-159	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
NIPEDNLJ_00207	2.54e-42	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
NIPEDNLJ_00208	1.41e-164	-	-	-	S	-	-	-	Putative threonine/serine exporter
NIPEDNLJ_00209	8.68e-106	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
NIPEDNLJ_00210	3.13e-150	-	-	-	I	-	-	-	phosphatase
NIPEDNLJ_00211	8.76e-08	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
NIPEDNLJ_00212	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
NIPEDNLJ_00213	4.5e-149	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
NIPEDNLJ_00219	5.75e-96	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00220	4.49e-82	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00221	8.86e-191	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
NIPEDNLJ_00222	2.56e-249	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
NIPEDNLJ_00223	2.81e-101	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
NIPEDNLJ_00224	1.01e-07	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
NIPEDNLJ_00225	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
NIPEDNLJ_00226	2.09e-143	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
NIPEDNLJ_00227	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NIPEDNLJ_00228	5.37e-176	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NIPEDNLJ_00229	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NIPEDNLJ_00230	1.06e-259	-	-	-	-	-	-	-	-
NIPEDNLJ_00231	8.83e-141	comC	3.4.23.43	-	NOU	ko:K02236,ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	Type II secretory pathway prepilin signal peptidase PulO and related peptidases
NIPEDNLJ_00232	2.51e-94	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NIPEDNLJ_00233	2.06e-108	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
NIPEDNLJ_00234	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NIPEDNLJ_00235	1.28e-65	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
NIPEDNLJ_00236	5.45e-153	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NIPEDNLJ_00237	6.64e-139	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
NIPEDNLJ_00238	3.61e-61	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
NIPEDNLJ_00239	1.16e-203	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NIPEDNLJ_00240	5.72e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NIPEDNLJ_00241	4.36e-70	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NIPEDNLJ_00242	9.81e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NIPEDNLJ_00243	1.96e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NIPEDNLJ_00244	5.49e-38	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
NIPEDNLJ_00245	1.1e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NIPEDNLJ_00246	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NIPEDNLJ_00247	2.58e-65	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NIPEDNLJ_00248	7.42e-125	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NIPEDNLJ_00249	4.97e-40	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NIPEDNLJ_00250	1.54e-87	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NIPEDNLJ_00251	2.14e-123	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NIPEDNLJ_00252	5.03e-75	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NIPEDNLJ_00253	3.45e-111	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NIPEDNLJ_00254	5.94e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
NIPEDNLJ_00255	8.6e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
NIPEDNLJ_00256	8.24e-306	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
NIPEDNLJ_00257	6.16e-159	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
NIPEDNLJ_00258	2.41e-45	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NIPEDNLJ_00259	5.79e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
NIPEDNLJ_00260	2.19e-75	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NIPEDNLJ_00261	1.62e-83	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NIPEDNLJ_00262	2.19e-220	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NIPEDNLJ_00263	1.15e-82	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
NIPEDNLJ_00264	7.27e-179	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NIPEDNLJ_00265	2.2e-193	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NIPEDNLJ_00266	2.89e-181	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NIPEDNLJ_00267	1.75e-181	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
NIPEDNLJ_00268	9.25e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NIPEDNLJ_00269	1.61e-84	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
NIPEDNLJ_00270	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00271	2.58e-179	budC	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
NIPEDNLJ_00272	2.95e-147	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
NIPEDNLJ_00273	1.12e-129	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
NIPEDNLJ_00274	4.55e-267	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NIPEDNLJ_00275	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
NIPEDNLJ_00276	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NIPEDNLJ_00277	1.91e-261	camS	-	-	S	-	-	-	sex pheromone
NIPEDNLJ_00278	9.59e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NIPEDNLJ_00279	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
NIPEDNLJ_00280	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NIPEDNLJ_00281	1.91e-237	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
NIPEDNLJ_00282	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NIPEDNLJ_00283	4.27e-77	yjdF3	-	-	S	-	-	-	Protein of unknown function (DUF2992)
NIPEDNLJ_00284	3e-134	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_00285	7.45e-61	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
NIPEDNLJ_00286	1.35e-102	-	-	-	Q	-	-	-	Methyltransferase domain
NIPEDNLJ_00288	0.0	-	-	-	L	-	-	-	Recombinase
NIPEDNLJ_00289	0.0	-	-	-	L	-	-	-	Recombinase zinc beta ribbon domain
NIPEDNLJ_00290	4.44e-37	-	-	-	-	-	-	-	-
NIPEDNLJ_00291	7.67e-74	-	-	-	S	-	-	-	Bacteriophage holin family
NIPEDNLJ_00292	1.44e-73	-	-	-	S	-	-	-	Phage head-tail joining protein
NIPEDNLJ_00293	4.21e-55	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
NIPEDNLJ_00294	8.22e-269	-	-	-	S	-	-	-	Phage capsid family
NIPEDNLJ_00295	1.18e-149	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
NIPEDNLJ_00296	8.62e-313	-	-	-	S	-	-	-	Phage portal protein
NIPEDNLJ_00297	0.0	-	-	-	S	-	-	-	overlaps another CDS with the same product name
NIPEDNLJ_00298	2.05e-42	-	-	-	S	-	-	-	Domain of unknown function (DUF5049)
NIPEDNLJ_00299	1.85e-149	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
NIPEDNLJ_00300	1.95e-291	-	-	-	KL	-	-	-	DNA methylase
NIPEDNLJ_00301	2.8e-129	-	-	-	-	-	-	-	-
NIPEDNLJ_00302	6.16e-95	-	-	-	L	ko:K07451	-	ko00000,ko01000,ko02048	Endonuclease
NIPEDNLJ_00303	4.68e-109	-	-	-	-	-	-	-	-
NIPEDNLJ_00304	6.05e-232	-	-	-	L	-	-	-	SNF2 family N-terminal domain
NIPEDNLJ_00305	8.11e-65	-	-	-	L	-	-	-	SNF2 family N-terminal domain
NIPEDNLJ_00306	1.7e-59	-	-	-	S	-	-	-	VRR_NUC
NIPEDNLJ_00307	0.0	-	-	-	S	ko:K06919	-	ko00000	Phage plasmid primase, P4
NIPEDNLJ_00308	3.01e-67	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
NIPEDNLJ_00309	0.0	-	2.7.7.7	-	L	ko:K02334	-	ko00000,ko01000	DNA polymerase
NIPEDNLJ_00310	3.85e-128	-	-	-	S	-	-	-	Protein of unknown function (DUF2815)
NIPEDNLJ_00311	3.06e-262	-	-	-	L	-	-	-	Protein of unknown function (DUF2800)
NIPEDNLJ_00312	6.48e-58	-	-	-	-	-	-	-	-
NIPEDNLJ_00313	1.72e-36	-	-	-	-	-	-	-	-
NIPEDNLJ_00315	2.73e-31	-	-	-	S	-	-	-	Domain of unknown function (DUF1837)
NIPEDNLJ_00316	2.38e-132	-	-	-	L	-	-	-	Dead deah box helicase domain protein
NIPEDNLJ_00317	5.95e-238	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00318	8.83e-138	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_00319	8.48e-110	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_00320	2.44e-266	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
NIPEDNLJ_00321	1.44e-312	-	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	pyridine nucleotide-disulfide oxidoreductase
NIPEDNLJ_00322	9.7e-109	yvbK	-	-	K	-	-	-	GNAT family
NIPEDNLJ_00323	7.41e-120	-	-	-	-	-	-	-	-
NIPEDNLJ_00324	1.08e-138	pnb	-	-	C	-	-	-	nitroreductase
NIPEDNLJ_00325	1.93e-216	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
NIPEDNLJ_00326	5.79e-217	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
NIPEDNLJ_00327	1.07e-88	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
NIPEDNLJ_00328	4.99e-101	-	-	-	K	-	-	-	LytTr DNA-binding domain
NIPEDNLJ_00329	4.55e-121	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
NIPEDNLJ_00330	1.07e-74	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_00331	8.55e-291	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_00332	3.08e-151	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
NIPEDNLJ_00333	2.52e-102	yjcF	3.5.4.33, 4.4.1.8	-	K	ko:K02348,ko:K07000,ko:K11991,ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007,ko03016	protein acetylation
NIPEDNLJ_00334	3.91e-248	-	-	-	S	-	-	-	Protein of unknown function (DUF3114)
NIPEDNLJ_00335	0.0	gshA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
NIPEDNLJ_00336	2.16e-212	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
NIPEDNLJ_00337	1.46e-135	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
NIPEDNLJ_00338	4.62e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
NIPEDNLJ_00339	1.08e-244	mocA	-	-	S	-	-	-	Oxidoreductase
NIPEDNLJ_00340	3.85e-297	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
NIPEDNLJ_00342	2.09e-266	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
NIPEDNLJ_00343	6.79e-43	-	-	-	-	-	-	-	-
NIPEDNLJ_00344	9.99e-23	-	-	-	-	-	-	-	-
NIPEDNLJ_00345	3.7e-201	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
NIPEDNLJ_00346	2.45e-88	gtcA	-	-	S	-	-	-	Teichoic acid glycosylation protein
NIPEDNLJ_00347	9.49e-103	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
NIPEDNLJ_00348	4.08e-215	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
NIPEDNLJ_00349	6.6e-279	arcT	-	-	E	-	-	-	Aminotransferase
NIPEDNLJ_00350	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
NIPEDNLJ_00351	0.0	potE	-	-	E	-	-	-	Amino Acid
NIPEDNLJ_00352	3.38e-195	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
NIPEDNLJ_00353	1.26e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
NIPEDNLJ_00354	2.53e-42	-	-	-	-	-	-	-	-
NIPEDNLJ_00355	1.27e-178	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
NIPEDNLJ_00356	8.11e-191	cps1D	-	-	M	-	-	-	Domain of unknown function (DUF4422)
NIPEDNLJ_00357	1.48e-220	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
NIPEDNLJ_00358	5.7e-153	-	-	-	M	-	-	-	Bacterial sugar transferase
NIPEDNLJ_00359	0.0	spoIIQ	-	-	M	ko:K06386	-	ko00000	Peptidase family M23
NIPEDNLJ_00360	0.0	-	-	-	G	-	-	-	Peptidase_C39 like family
NIPEDNLJ_00361	4.46e-46	-	-	-	-	-	-	-	-
NIPEDNLJ_00362	4.12e-277	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
NIPEDNLJ_00363	0.0	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
NIPEDNLJ_00364	1.04e-192	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00365	2.34e-161	cps3F	-	-	-	-	-	-	-
NIPEDNLJ_00366	2.37e-127	-	-	-	M	-	-	-	biosynthesis protein
NIPEDNLJ_00367	3.4e-92	rgpB	-	GT2	M	ko:K12997	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
NIPEDNLJ_00368	1.63e-61	rgpB	-	GT2	M	ko:K12997	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
NIPEDNLJ_00369	1.85e-152	-	-	-	M	-	-	-	Domain of unknown function (DUF4422)
NIPEDNLJ_00370	3.06e-173	-	-	-	S	-	-	-	Glycosyltransferase like family
NIPEDNLJ_00371	4.77e-83	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NIPEDNLJ_00372	1.65e-216	ykoT	-	-	M	-	-	-	Glycosyl transferase family 2
NIPEDNLJ_00373	0.0	-	-	CBM50	NU	ko:K02395,ko:K19223	-	ko00000,ko01000,ko01002,ko01011,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NIPEDNLJ_00374	2.34e-207	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NIPEDNLJ_00375	2.27e-139	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
NIPEDNLJ_00376	6.66e-263	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NIPEDNLJ_00377	2.73e-201	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
NIPEDNLJ_00378	0.0	csd1	3.5.1.28	-	M	ko:K01447,ko:K17733,ko:K19117	-	ko00000,ko01000,ko01002,ko01011,ko02048	N-Acetylmuramoyl-L-alanine amidase
NIPEDNLJ_00379	9.19e-233	yueF	-	-	S	-	-	-	AI-2E family transporter
NIPEDNLJ_00380	2.28e-299	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
NIPEDNLJ_00381	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NIPEDNLJ_00382	0.0	-	-	-	M	-	-	-	NlpC/P60 family
NIPEDNLJ_00383	0.0	-	-	-	S	-	-	-	Peptidase, M23
NIPEDNLJ_00384	0.0	bamA	-	-	GM	ko:K07277,ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko02000,ko03016,ko03019,ko03029	domain, Protein
NIPEDNLJ_00385	0.0	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_00386	3.06e-222	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00387	0.0	bamA	-	-	GM	ko:K07277,ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko02000,ko03016,ko03019,ko03029	domain, Protein
NIPEDNLJ_00388	7.18e-86	-	-	-	K	-	-	-	Transcriptional regulator, GntR family
NIPEDNLJ_00389	1.29e-199	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_00390	5.54e-146	-	-	-	-	-	-	-	-
NIPEDNLJ_00391	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00392	3.86e-182	-	-	-	G	-	-	-	MucBP domain
NIPEDNLJ_00393	6.36e-130	-	-	-	S	-	-	-	Pfam:DUF3816
NIPEDNLJ_00394	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	Belongs to the ClpA ClpB family
NIPEDNLJ_00395	1.38e-37	-	-	-	-	-	-	-	-
NIPEDNLJ_00396	4.32e-53	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
NIPEDNLJ_00397	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NIPEDNLJ_00398	2.56e-290	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
NIPEDNLJ_00399	9.79e-137	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
NIPEDNLJ_00400	2.24e-85	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
NIPEDNLJ_00401	6.57e-229	mprF	-	-	I	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NIPEDNLJ_00402	5.67e-53	-	-	-	S	-	-	-	Protein of unknown function (DUF1797)
NIPEDNLJ_00414	2.28e-121	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
NIPEDNLJ_00415	1.59e-30	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
NIPEDNLJ_00416	4.03e-165	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
NIPEDNLJ_00417	1.13e-77	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
NIPEDNLJ_00418	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
NIPEDNLJ_00419	1.61e-143	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NIPEDNLJ_00420	7.16e-201	-	-	-	O	-	-	-	Uncharacterized protein family (UPF0051)
NIPEDNLJ_00421	1.08e-85	-	-	-	M	-	-	-	LysM domain protein
NIPEDNLJ_00422	0.0	-	-	-	EP	-	-	-	Psort location Cytoplasmic, score
NIPEDNLJ_00423	3.99e-132	-	-	-	M	-	-	-	LysM domain protein
NIPEDNLJ_00424	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00425	3.3e-145	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
NIPEDNLJ_00426	6.91e-299	-	1.3.1.1	-	E	ko:K17722	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NIPEDNLJ_00427	9.31e-309	-	1.3.1.1	-	C	ko:K17723	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	ko00000,ko00001,ko00002,ko01000	4Fe-4S dicluster domain
NIPEDNLJ_00428	4.49e-197	yeaE	-	-	S	-	-	-	Aldo keto
NIPEDNLJ_00429	4.45e-99	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
NIPEDNLJ_00430	0.0	umuC	-	-	L	ko:K03502	-	ko00000,ko03400	impB/mucB/samB family C-terminal domain
NIPEDNLJ_00431	2.65e-102	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
NIPEDNLJ_00432	2.91e-110	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
NIPEDNLJ_00433	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00434	1.24e-302	-	-	-	L	-	-	-	transposase IS116 IS110 IS902 family protein
NIPEDNLJ_00435	7.03e-33	-	-	-	-	-	-	-	-
NIPEDNLJ_00436	5.83e-135	-	-	-	V	-	-	-	VanZ like family
NIPEDNLJ_00437	2.01e-302	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
NIPEDNLJ_00438	1.46e-110	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
NIPEDNLJ_00439	0.0	-	-	-	EGP	-	-	-	Major Facilitator
NIPEDNLJ_00440	3.14e-121	tag1	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
NIPEDNLJ_00441	6.66e-281	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NIPEDNLJ_00442	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
NIPEDNLJ_00443	1.77e-56	-	-	-	-	-	-	-	-
NIPEDNLJ_00444	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
NIPEDNLJ_00445	1.38e-193	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NIPEDNLJ_00446	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
NIPEDNLJ_00447	2.18e-112	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
NIPEDNLJ_00448	2.33e-224	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NIPEDNLJ_00449	4.69e-101	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
NIPEDNLJ_00450	1.24e-32	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
NIPEDNLJ_00451	3.6e-145	-	-	-	-	-	-	-	-
NIPEDNLJ_00452	1.25e-238	rbsR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding proteins and sugar binding domain of LacI family
NIPEDNLJ_00453	4.88e-209	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NIPEDNLJ_00454	1.78e-42	-	-	-	-	-	-	-	-
NIPEDNLJ_00455	8.99e-141	XK27_07085	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
NIPEDNLJ_00456	9.17e-59	-	-	-	-	-	-	-	-
NIPEDNLJ_00458	6.95e-130	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NIPEDNLJ_00461	1.73e-26	-	-	-	-	-	-	-	-
NIPEDNLJ_00463	6.39e-40	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
NIPEDNLJ_00464	4.37e-97	-	-	-	K	-	-	-	Peptidase S24-like
NIPEDNLJ_00465	3.82e-06	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
NIPEDNLJ_00466	2.36e-84	-	-	-	S	-	-	-	DNA binding
NIPEDNLJ_00471	9.67e-201	-	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
NIPEDNLJ_00472	3.19e-202	pi112	-	-	L	-	-	-	PDDEXK-like domain of unknown function (DUF3799)
NIPEDNLJ_00473	5.51e-85	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
NIPEDNLJ_00474	3.03e-74	-	-	-	-	-	-	-	-
NIPEDNLJ_00476	3.48e-68	-	-	-	S	-	-	-	Protein of unknown function (DUF1064)
NIPEDNLJ_00480	2.31e-95	-	-	-	-	-	-	-	-
NIPEDNLJ_00482	2.24e-29	-	-	-	S	-	-	-	Predicted membrane protein (DUF2335)
NIPEDNLJ_00483	1.51e-19	-	-	-	-	-	-	-	-
NIPEDNLJ_00484	2.6e-99	-	-	-	L	-	-	-	HNH nucleases
NIPEDNLJ_00485	1.05e-85	-	-	-	L	-	-	-	Phage terminase, small subunit
NIPEDNLJ_00486	0.0	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
NIPEDNLJ_00487	3.92e-269	-	-	-	S	-	-	-	Phage portal protein
NIPEDNLJ_00488	8.36e-137	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
NIPEDNLJ_00489	3.22e-252	-	-	-	S	-	-	-	Phage capsid family
NIPEDNLJ_00490	1.17e-53	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
NIPEDNLJ_00492	5.34e-40	-	-	-	S	-	-	-	exonuclease activity
NIPEDNLJ_00494	1.68e-96	-	-	-	S	-	-	-	Phage tail tube protein
NIPEDNLJ_00496	3.72e-153	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
NIPEDNLJ_00497	2.12e-101	-	-	-	S	-	-	-	Phage tail protein
NIPEDNLJ_00498	2.26e-168	-	-	-	M	-	-	-	Prophage endopeptidase tail
NIPEDNLJ_00499	1.31e-44	-	-	-	LM	-	-	-	gp58-like protein
NIPEDNLJ_00506	8.82e-54	-	-	-	S	-	-	-	Bacteriophage holin of superfamily 6 (Holin_LLH)
NIPEDNLJ_00507	1.34e-191	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
NIPEDNLJ_00508	2.07e-16	-	-	-	S	-	-	-	peptidoglycan catabolic process
NIPEDNLJ_00512	5.19e-90	-	-	-	-	-	-	-	-
NIPEDNLJ_00513	8.28e-73	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NIPEDNLJ_00514	1.78e-118	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
NIPEDNLJ_00515	4.58e-134	folE	2.7.6.3, 3.5.4.16	-	F	ko:K00950,ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase 1
NIPEDNLJ_00516	1.51e-280	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
NIPEDNLJ_00517	2.35e-133	folQ	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
NIPEDNLJ_00518	7.39e-274	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	dihydropteroate synthase
NIPEDNLJ_00519	2.67e-60	-	-	-	-	-	-	-	-
NIPEDNLJ_00520	2.47e-53	-	-	-	-	-	-	-	-
NIPEDNLJ_00522	8.18e-215	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
NIPEDNLJ_00523	2.15e-194	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
NIPEDNLJ_00524	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
NIPEDNLJ_00525	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
NIPEDNLJ_00526	5.33e-77	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
NIPEDNLJ_00527	2.34e-285	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
NIPEDNLJ_00528	0.0	yhaN	-	-	L	-	-	-	AAA domain
NIPEDNLJ_00529	4.08e-176	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
NIPEDNLJ_00530	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00532	4.99e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
NIPEDNLJ_00533	3.83e-175	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_00534	3.29e-279	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
NIPEDNLJ_00535	1.85e-157	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
NIPEDNLJ_00536	4.37e-23	-	-	-	S	-	-	-	YSIRK type signal peptide
NIPEDNLJ_00537	1.79e-18	-	2.1.1.72, 3.1.21.3	AA10,CBM73	M	ko:K01154,ko:K02014,ko:K03933,ko:K07316	-	ko00000,ko01000,ko02000,ko02048	domain protein
NIPEDNLJ_00538	5.11e-17	-	2.1.1.72, 3.1.21.3	AA10,CBM73	M	ko:K01154,ko:K02014,ko:K03933,ko:K07316	-	ko00000,ko01000,ko02000,ko02048	domain protein
NIPEDNLJ_00539	4.35e-76	-	2.1.1.72, 3.1.21.3	AA10,CBM73	M	ko:K01154,ko:K02014,ko:K03933,ko:K07316	-	ko00000,ko01000,ko02000,ko02048	domain protein
NIPEDNLJ_00540	1.59e-14	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
NIPEDNLJ_00541	5.37e-74	-	-	-	S	-	-	-	Small secreted protein
NIPEDNLJ_00542	1.65e-68	ytpP	-	-	CO	-	-	-	Thioredoxin
NIPEDNLJ_00543	3.43e-154	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NIPEDNLJ_00544	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
NIPEDNLJ_00545	6.48e-154	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
NIPEDNLJ_00546	8.26e-118	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
NIPEDNLJ_00547	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NIPEDNLJ_00548	1.77e-200	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
NIPEDNLJ_00549	1.26e-59	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NIPEDNLJ_00550	5.01e-52	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NIPEDNLJ_00551	2.82e-105	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NIPEDNLJ_00552	1.57e-297	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
NIPEDNLJ_00553	8.6e-222	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
NIPEDNLJ_00554	1.07e-110	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NIPEDNLJ_00555	1.82e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
NIPEDNLJ_00556	5.46e-74	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NIPEDNLJ_00557	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00558	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
NIPEDNLJ_00559	6.39e-124	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
NIPEDNLJ_00560	7.72e-279	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
NIPEDNLJ_00561	5.4e-63	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
NIPEDNLJ_00562	2.72e-155	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NIPEDNLJ_00563	1.92e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
NIPEDNLJ_00564	2.22e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
NIPEDNLJ_00565	5.88e-175	yqeM	-	-	Q	-	-	-	Methyltransferase
NIPEDNLJ_00566	1.48e-268	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
NIPEDNLJ_00567	2.89e-129	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
NIPEDNLJ_00568	7.21e-39	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
NIPEDNLJ_00569	9.72e-156	csrR	-	-	K	-	-	-	response regulator
NIPEDNLJ_00570	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
NIPEDNLJ_00571	0.0	potE	-	-	E	-	-	-	Amino Acid
NIPEDNLJ_00572	1.51e-297	-	-	-	V	-	-	-	MatE
NIPEDNLJ_00573	2.53e-88	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
NIPEDNLJ_00574	3.89e-215	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NIPEDNLJ_00575	4.22e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
NIPEDNLJ_00576	1.57e-185	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NIPEDNLJ_00577	3.75e-119	XK27_09705	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
NIPEDNLJ_00578	5.79e-78	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
NIPEDNLJ_00579	6.06e-251	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NIPEDNLJ_00580	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NIPEDNLJ_00581	3.06e-222	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00582	0.0	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_00583	3.29e-146	-	-	-	M	-	-	-	PFAM NLP P60 protein
NIPEDNLJ_00584	2.8e-150	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
NIPEDNLJ_00585	3.52e-101	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NIPEDNLJ_00586	2.13e-88	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
NIPEDNLJ_00587	0.0	-	-	-	S	-	-	-	membrane
NIPEDNLJ_00588	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
NIPEDNLJ_00589	1.53e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
NIPEDNLJ_00590	8e-131	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NIPEDNLJ_00591	7.32e-99	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
NIPEDNLJ_00592	1.76e-26	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
NIPEDNLJ_00593	7.07e-48	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
NIPEDNLJ_00594	1.02e-234	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
NIPEDNLJ_00595	7.66e-88	yqhL	-	-	P	-	-	-	Rhodanese-like protein
NIPEDNLJ_00596	1.18e-30	-	-	-	S	-	-	-	Protein of unknown function (DUF3042)
NIPEDNLJ_00597	1.96e-224	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NIPEDNLJ_00598	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
NIPEDNLJ_00599	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NIPEDNLJ_00600	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00601	6.07e-251	tnp2	-	-	L	-	-	-	PFAM Transposase, IS204 IS1001 IS1096 IS1165
NIPEDNLJ_00602	7.46e-92	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NIPEDNLJ_00603	3.94e-35	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NIPEDNLJ_00604	2.11e-59	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NIPEDNLJ_00605	1.28e-18	-	-	-	-	-	-	-	-
NIPEDNLJ_00606	3.86e-129	msrA	1.8.4.11	-	C	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NIPEDNLJ_00607	1.08e-67	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
NIPEDNLJ_00608	8.58e-134	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_00609	1.63e-201	-	-	-	-	-	-	-	-
NIPEDNLJ_00610	1.67e-229	-	-	-	-	-	-	-	-
NIPEDNLJ_00611	3.73e-110	-	-	-	S	-	-	-	Protein conserved in bacteria
NIPEDNLJ_00615	3.3e-145	-	-	-	K	-	-	-	Transcriptional regulator
NIPEDNLJ_00616	4.03e-264	-	-	-	L	-	-	-	transposase IS116 IS110 IS902 family protein
NIPEDNLJ_00617	2.68e-67	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
NIPEDNLJ_00618	8.44e-71	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
NIPEDNLJ_00619	1.36e-50	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
NIPEDNLJ_00620	1.23e-166	-	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NIPEDNLJ_00621	1.44e-254	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
NIPEDNLJ_00622	1.73e-147	-	-	-	J	-	-	-	2'-5' RNA ligase superfamily
NIPEDNLJ_00623	2.27e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
NIPEDNLJ_00624	3.57e-89	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NIPEDNLJ_00625	2.98e-188	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NIPEDNLJ_00626	7.97e-280	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NIPEDNLJ_00627	1.15e-57	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NIPEDNLJ_00628	1.24e-198	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
NIPEDNLJ_00629	2.81e-191	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
NIPEDNLJ_00630	1.85e-99	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
NIPEDNLJ_00631	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
NIPEDNLJ_00632	8.66e-70	-	-	-	-	-	-	-	-
NIPEDNLJ_00633	3.59e-147	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
NIPEDNLJ_00634	6.66e-43	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NIPEDNLJ_00635	5.95e-238	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00636	3.56e-263	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NIPEDNLJ_00637	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NIPEDNLJ_00638	1.43e-222	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NIPEDNLJ_00639	1.98e-314	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NIPEDNLJ_00640	4.79e-33	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
NIPEDNLJ_00641	4.29e-116	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
NIPEDNLJ_00642	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
NIPEDNLJ_00643	2.33e-206	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
NIPEDNLJ_00644	4.49e-151	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
NIPEDNLJ_00645	4.7e-157	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
NIPEDNLJ_00646	1.1e-34	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
NIPEDNLJ_00647	1.05e-77	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
NIPEDNLJ_00648	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
NIPEDNLJ_00649	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NIPEDNLJ_00650	1.84e-238	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
NIPEDNLJ_00651	1.81e-50	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NIPEDNLJ_00652	1.57e-168	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
NIPEDNLJ_00653	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
NIPEDNLJ_00654	4.23e-253	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
NIPEDNLJ_00655	4.23e-76	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
NIPEDNLJ_00656	0.0	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NIPEDNLJ_00657	4.94e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
NIPEDNLJ_00658	5.32e-53	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
NIPEDNLJ_00659	5.33e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NIPEDNLJ_00660	5.46e-183	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
NIPEDNLJ_00661	0.0	-	-	-	E	ko:K03294	-	ko00000	amino acid
NIPEDNLJ_00662	3.03e-83	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NIPEDNLJ_00663	2.58e-46	-	-	-	-	-	-	-	-
NIPEDNLJ_00664	8.66e-70	-	-	-	S	-	-	-	Mazg nucleotide pyrophosphohydrolase
NIPEDNLJ_00665	1.53e-205	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
NIPEDNLJ_00666	1.12e-31	-	-	-	-	-	-	-	-
NIPEDNLJ_00667	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
NIPEDNLJ_00668	4.63e-142	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NIPEDNLJ_00669	7.44e-51	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NIPEDNLJ_00670	6.95e-59	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
NIPEDNLJ_00671	3.71e-236	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
NIPEDNLJ_00672	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
NIPEDNLJ_00673	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
NIPEDNLJ_00674	5.33e-167	-	-	-	D	-	-	-	transport
NIPEDNLJ_00675	1.39e-229	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
NIPEDNLJ_00676	8.07e-204	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
NIPEDNLJ_00677	5.25e-312	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00678	8.08e-167	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
NIPEDNLJ_00679	7.35e-291	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
NIPEDNLJ_00680	1.17e-213	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
NIPEDNLJ_00681	2.48e-57	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NIPEDNLJ_00684	3e-69	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
NIPEDNLJ_00685	3.97e-232	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_00686	1.51e-155	sdhB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
NIPEDNLJ_00687	5.58e-192	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
NIPEDNLJ_00688	3.25e-136	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Peroxiredoxin
NIPEDNLJ_00689	0.0	-	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Thioredoxin domain
NIPEDNLJ_00690	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
NIPEDNLJ_00691	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
NIPEDNLJ_00692	1.89e-35	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
NIPEDNLJ_00693	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NIPEDNLJ_00694	5.55e-116	-	-	-	-	-	-	-	-
NIPEDNLJ_00695	6.59e-48	-	-	-	-	-	-	-	-
NIPEDNLJ_00696	3.35e-131	-	-	-	K	-	-	-	DNA-templated transcription, initiation
NIPEDNLJ_00697	3.66e-40	-	-	-	-	-	-	-	-
NIPEDNLJ_00698	5.74e-79	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_00699	1.48e-291	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_00700	6.74e-53	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
NIPEDNLJ_00701	2.21e-213	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
NIPEDNLJ_00702	1.13e-176	epsB	-	-	M	-	-	-	biosynthesis protein
NIPEDNLJ_00703	1.36e-148	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
NIPEDNLJ_00704	1.22e-127	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
NIPEDNLJ_00705	2.66e-63	capM	-	-	M	ko:K13012	-	ko00000,ko01005	Bacterial sugar transferase
NIPEDNLJ_00706	2.73e-112	-	-	GT4	G	ko:K19422	-	ko00000,ko01000	Glycosyl transferase 4-like domain
NIPEDNLJ_00707	1.91e-52	-	-	-	M	-	-	-	Glycosyltransferase like family 2
NIPEDNLJ_00708	1.99e-48	-	-	-	S	-	-	-	O-antigen polysaccharide polymerase Wzy
NIPEDNLJ_00710	2.16e-22	-	-	-	S	-	-	-	polysaccharide biosynthetic process
NIPEDNLJ_00712	4.87e-19	-	-	-	M	-	-	-	Glycosyl transferases group 1
NIPEDNLJ_00714	1.32e-51	-	-	-	M	-	-	-	Domain of unknown function (DUF1919)
NIPEDNLJ_00715	1.2e-35	-	-	-	M	ko:K07271	-	ko00000,ko01000	LicD family
NIPEDNLJ_00716	4.39e-62	tagD	2.7.7.15, 2.7.7.39	-	IM	ko:K00968,ko:K00980	ko00440,ko00564,ko01100,ko05231,map00440,map00564,map01100,map05231	ko00000,ko00001,ko00002,ko01000	Glycerol-3-phosphate cytidylyltransferase
NIPEDNLJ_00717	1.18e-77	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_00718	2.82e-280	-	-	-	L	-	-	-	Integrase core domain
NIPEDNLJ_00719	7.29e-40	-	-	-	O	-	-	-	Bacterial dnaA protein
NIPEDNLJ_00720	1.05e-97	-	-	-	O	-	-	-	Bacterial dnaA protein
NIPEDNLJ_00721	3.74e-23	-	-	-	L	-	-	-	Helix-turn-helix domain
NIPEDNLJ_00722	2.89e-141	-	-	-	L	-	-	-	Bacterial dnaA protein
NIPEDNLJ_00723	1.14e-22	-	-	-	L	-	-	-	Integrase core domain
NIPEDNLJ_00724	4.45e-103	-	-	-	L	-	-	-	Integrase core domain
NIPEDNLJ_00725	1.96e-111	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_00726	1.04e-170	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
NIPEDNLJ_00727	1.01e-247	-	-	-	M	-	-	-	MobA-like NTP transferase domain
NIPEDNLJ_00728	2.21e-121	-	-	-	M	-	-	-	MobA-like NTP transferase domain
NIPEDNLJ_00729	2.62e-247	cudT	-	-	U	ko:K03451	-	ko00000	Belongs to the BCCT transporter (TC 2.A.15) family
NIPEDNLJ_00730	4.61e-250	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NIPEDNLJ_00732	2.8e-81	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
NIPEDNLJ_00733	3.44e-12	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
NIPEDNLJ_00734	0.0	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
NIPEDNLJ_00735	6e-64	-	-	-	L	-	-	-	Integrase core domain
NIPEDNLJ_00736	3.06e-126	epsB	-	-	M	-	-	-	biosynthesis protein
NIPEDNLJ_00737	1.05e-140	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
NIPEDNLJ_00738	1.09e-60	-	-	-	M	ko:K13012	-	ko00000,ko01005	Bacterial sugar transferase
NIPEDNLJ_00739	1.07e-104	-	-	GT4	G	ko:K19422	-	ko00000,ko01000	Glycosyl transferase 4-like domain
NIPEDNLJ_00740	3.66e-83	wefC	-	-	M	-	-	-	Stealth protein CR2, conserved region 2
NIPEDNLJ_00741	9.25e-52	-	-	-	M	-	-	-	Glycosyltransferase GT-D fold
NIPEDNLJ_00743	5.55e-85	cps2I	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
NIPEDNLJ_00744	1.07e-49	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
NIPEDNLJ_00745	2.91e-33	-	-	-	M	-	-	-	PFAM Glycosyl transferase family 2
NIPEDNLJ_00746	3.62e-34	-	-	-	S	-	-	-	Glycosyltransferase like family 2
NIPEDNLJ_00747	2.69e-59	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
NIPEDNLJ_00749	9.92e-33	-	-	-	S	-	-	-	Acyltransferase family
NIPEDNLJ_00750	0.0	-	2.4.1.5	GH13	G	ko:K00689	ko00500,ko02020,map00500,map02020	ko00000,ko00001,ko01000	Glycosyl hydrolase family 70
NIPEDNLJ_00751	1.3e-254	tnp2	-	-	L	-	-	-	PFAM Transposase, IS204 IS1001 IS1096 IS1165
NIPEDNLJ_00752	0.0	-	2.4.1.5	GH13	G	ko:K00689	ko00500,ko02020,map00500,map02020	ko00000,ko00001,ko01000	Glycosyl hydrolase family 70
NIPEDNLJ_00753	1.03e-301	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
NIPEDNLJ_00754	2.01e-35	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00755	1.69e-109	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00756	2.9e-275	-	-	-	L	-	-	-	Integrase core domain
NIPEDNLJ_00757	6.02e-163	-	-	-	O	-	-	-	Bacterial dnaA protein
NIPEDNLJ_00759	1.67e-87	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_00760	5.16e-292	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_00761	2.59e-31	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
NIPEDNLJ_00762	6.49e-49	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
NIPEDNLJ_00763	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
NIPEDNLJ_00765	0.0	snf	-	-	KL	-	-	-	domain protein
NIPEDNLJ_00766	1.44e-185	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
NIPEDNLJ_00767	3.07e-263	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
NIPEDNLJ_00768	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
NIPEDNLJ_00769	1.45e-135	-	-	-	L	-	-	-	nuclease
NIPEDNLJ_00770	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
NIPEDNLJ_00771	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00772	7.45e-92	-	-	-	-	-	-	-	-
NIPEDNLJ_00773	1.18e-134	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
NIPEDNLJ_00774	5.37e-156	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
NIPEDNLJ_00775	1.29e-194	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
NIPEDNLJ_00776	2.11e-36	-	-	-	-	-	-	-	-
NIPEDNLJ_00777	1.34e-147	-	-	-	-	-	-	-	-
NIPEDNLJ_00779	3.82e-141	-	-	-	I	-	-	-	Acid phosphatase homologues
NIPEDNLJ_00780	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
NIPEDNLJ_00781	4.67e-165	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
NIPEDNLJ_00782	3.25e-291	-	-	-	P	-	-	-	Chloride transporter, ClC family
NIPEDNLJ_00783	7.82e-148	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
NIPEDNLJ_00784	6.5e-189	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
NIPEDNLJ_00785	2.08e-175	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
NIPEDNLJ_00786	3.41e-65	-	-	-	-	-	-	-	-
NIPEDNLJ_00787	1.79e-297	-	-	-	S	-	-	-	SEC-C Motif Domain Protein
NIPEDNLJ_00788	5.59e-77	-	-	-	S	-	-	-	SEC-C Motif Domain Protein
NIPEDNLJ_00789	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
NIPEDNLJ_00790	7.59e-116	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_00791	1.56e-95	-	-	-	-	-	-	-	-
NIPEDNLJ_00792	3.93e-221	-	-	-	-	-	-	-	-
NIPEDNLJ_00793	6.05e-134	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_00794	3.48e-225	fecB	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
NIPEDNLJ_00795	1.88e-196	-	-	-	EG	-	-	-	EamA-like transporter family
NIPEDNLJ_00796	9.45e-152	-	-	-	L	-	-	-	Integrase
NIPEDNLJ_00797	1.15e-200	rssA	-	-	S	-	-	-	Phospholipase, patatin family
NIPEDNLJ_00798	6.42e-41	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
NIPEDNLJ_00799	1.92e-229	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
NIPEDNLJ_00800	1.23e-253	xerS	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NIPEDNLJ_00802	2.24e-91	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
NIPEDNLJ_00803	1.94e-100	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
NIPEDNLJ_00804	4.72e-213	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NIPEDNLJ_00805	3.31e-43	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NIPEDNLJ_00806	2e-196	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
NIPEDNLJ_00807	7.98e-83	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
NIPEDNLJ_00808	2.63e-60	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
NIPEDNLJ_00809	2.15e-280	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
NIPEDNLJ_00810	4.44e-91	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
NIPEDNLJ_00811	2.29e-97	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
NIPEDNLJ_00812	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
NIPEDNLJ_00813	3.42e-183	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NIPEDNLJ_00814	1.14e-178	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
NIPEDNLJ_00815	3.35e-169	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
NIPEDNLJ_00824	2.35e-79	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00825	8.33e-190	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_00826	1.27e-62	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_00827	9.75e-145	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
NIPEDNLJ_00828	1.77e-209	-	-	-	I	-	-	-	alpha/beta hydrolase fold
NIPEDNLJ_00829	2.05e-27	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
NIPEDNLJ_00830	4.22e-41	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
NIPEDNLJ_00832	1.37e-64	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
NIPEDNLJ_00833	1.38e-192	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
NIPEDNLJ_00834	1.38e-117	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
NIPEDNLJ_00835	1.15e-25	-	-	-	-	-	-	-	-
NIPEDNLJ_00836	1.75e-50	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
NIPEDNLJ_00837	3.21e-180	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00838	1.2e-146	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
NIPEDNLJ_00839	9.83e-148	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
NIPEDNLJ_00840	3.91e-95	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
NIPEDNLJ_00841	8.32e-56	-	-	-	S	ko:K09790	-	ko00000	Protein of unknown function (DUF454)
NIPEDNLJ_00842	0.0	-	-	-	I	-	-	-	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NIPEDNLJ_00843	3.06e-222	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00844	0.0	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_00845	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
NIPEDNLJ_00847	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NIPEDNLJ_00848	7.36e-291	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
NIPEDNLJ_00849	3.25e-155	-	-	-	S	-	-	-	SNARE associated Golgi protein
NIPEDNLJ_00850	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
NIPEDNLJ_00851	3.5e-70	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NIPEDNLJ_00852	2.52e-76	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NIPEDNLJ_00853	9.71e-90	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NIPEDNLJ_00854	2.47e-184	-	-	-	S	-	-	-	DUF218 domain
NIPEDNLJ_00855	0.0	ubiB	-	-	S	ko:K03688	-	ko00000	ABC1 family
NIPEDNLJ_00856	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
NIPEDNLJ_00857	1.68e-98	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
NIPEDNLJ_00858	1.67e-308	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily
NIPEDNLJ_00859	9.49e-98	-	-	-	S	-	-	-	UPF0756 membrane protein
NIPEDNLJ_00860	6.38e-106	-	-	-	S	-	-	-	Cupin domain
NIPEDNLJ_00861	8.67e-111	-	-	-	C	-	-	-	Flavodoxin
NIPEDNLJ_00862	5.72e-206	rlrB	-	-	K	-	-	-	LysR substrate binding domain protein
NIPEDNLJ_00863	9.96e-218	yvgN	-	-	C	-	-	-	Aldo keto reductase
NIPEDNLJ_00864	1.02e-51	XK27_08630	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
NIPEDNLJ_00865	3.82e-311	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
NIPEDNLJ_00866	2.61e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
NIPEDNLJ_00867	3.46e-205	-	-	-	S	-	-	-	Alpha beta hydrolase
NIPEDNLJ_00868	1.03e-202	gspA	-	-	M	-	-	-	family 8
NIPEDNLJ_00869	2.2e-292	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_00870	7.28e-101	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
NIPEDNLJ_00871	9.78e-151	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
NIPEDNLJ_00872	3.05e-123	-	-	-	-	-	-	-	-
NIPEDNLJ_00873	2.95e-207	-	-	-	S	-	-	-	EDD domain protein, DegV family
NIPEDNLJ_00874	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
NIPEDNLJ_00875	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
NIPEDNLJ_00876	3.19e-264	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
NIPEDNLJ_00877	5.85e-224	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
NIPEDNLJ_00878	5.12e-96	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NIPEDNLJ_00879	2.58e-85	esbA	-	-	S	-	-	-	Family of unknown function (DUF5322)
NIPEDNLJ_00880	7.37e-90	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
NIPEDNLJ_00881	2.94e-283	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
NIPEDNLJ_00882	1.44e-43	-	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
NIPEDNLJ_00883	3.55e-16	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
NIPEDNLJ_00884	1.95e-300	isp	-	-	L	-	-	-	Transposase
NIPEDNLJ_00885	6.82e-74	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
NIPEDNLJ_00886	4.28e-133	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
NIPEDNLJ_00887	1.41e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
NIPEDNLJ_00888	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
NIPEDNLJ_00889	5.69e-207	-	-	-	EG	-	-	-	EamA-like transporter family
NIPEDNLJ_00890	7.96e-158	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
NIPEDNLJ_00891	2.23e-113	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
NIPEDNLJ_00892	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
NIPEDNLJ_00893	2.86e-217	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
NIPEDNLJ_00894	2.09e-218	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
NIPEDNLJ_00895	4.11e-274	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
NIPEDNLJ_00896	1.8e-247	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
NIPEDNLJ_00897	8.22e-122	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
NIPEDNLJ_00898	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
NIPEDNLJ_00899	1.57e-237	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
NIPEDNLJ_00900	7.04e-215	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
NIPEDNLJ_00901	9.34e-227	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
NIPEDNLJ_00902	4.38e-161	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	LrgB-like family
NIPEDNLJ_00903	3.69e-87	lrgA	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	LrgA family
NIPEDNLJ_00904	1.88e-165	lytT	-	-	K	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator receiver
NIPEDNLJ_00905	0.0	lytS	2.7.13.3	-	T	ko:K07704	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	LytS YhcK-type transmembrane receptor domain protein
NIPEDNLJ_00906	1.54e-191	-	-	-	O	-	-	-	Band 7 protein
NIPEDNLJ_00907	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
NIPEDNLJ_00908	6.94e-200	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
NIPEDNLJ_00909	1.43e-51	-	-	-	S	-	-	-	Cytochrome B5
NIPEDNLJ_00910	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
NIPEDNLJ_00911	8.34e-147	nreC	-	-	K	ko:K07696	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	PFAM regulatory protein LuxR
NIPEDNLJ_00912	3.17e-204	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
NIPEDNLJ_00913	1.18e-76	-	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
NIPEDNLJ_00914	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
NIPEDNLJ_00915	9.11e-106	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
NIPEDNLJ_00916	8.7e-297	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NIPEDNLJ_00917	2.87e-306	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
NIPEDNLJ_00918	1.56e-184	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
NIPEDNLJ_00919	2.84e-42	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	FeoA domain
NIPEDNLJ_00920	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
NIPEDNLJ_00921	0.0	menE	6.2.1.26	-	H	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
NIPEDNLJ_00922	6.96e-201	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NIPEDNLJ_00923	9.54e-85	yuxO	-	-	Q	-	-	-	Thioesterase superfamily
NIPEDNLJ_00924	3.51e-142	yvrI	-	-	K	ko:K03091,ko:K03093	-	ko00000,ko03021	sigma factor activity
NIPEDNLJ_00925	3.07e-265	-	-	-	G	-	-	-	Transporter, major facilitator family protein
NIPEDNLJ_00926	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
NIPEDNLJ_00927	2.02e-143	-	-	-	T	ko:K10716	-	ko00000,ko02000	Ion transport 2 domain protein
NIPEDNLJ_00928	2.72e-102	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
NIPEDNLJ_00929	1.52e-285	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
NIPEDNLJ_00930	2.55e-119	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
NIPEDNLJ_00931	1.44e-235	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NIPEDNLJ_00932	1.56e-229	rihA	-	-	F	ko:K01250	-	ko00000,ko01000	Inosine-uridine preferring nucleoside hydrolase
NIPEDNLJ_00934	0.0	-	-	-	L	-	-	-	PLD-like domain
NIPEDNLJ_00935	1.39e-122	mrr2	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
NIPEDNLJ_00936	8.21e-216	-	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
NIPEDNLJ_00937	3.92e-88	-	-	-	V	-	-	-	type I restriction modification DNA specificity domain
NIPEDNLJ_00938	4.13e-228	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NIPEDNLJ_00939	1.72e-65	hsdS	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	type I restriction modification DNA specificity domain
NIPEDNLJ_00940	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
NIPEDNLJ_00941	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
NIPEDNLJ_00942	4.26e-178	butA	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
NIPEDNLJ_00943	1.31e-103	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
NIPEDNLJ_00944	1.26e-60	-	-	-	-	-	-	-	-
NIPEDNLJ_00945	1.81e-41	-	-	-	-	-	-	-	-
NIPEDNLJ_00946	6.31e-62	-	-	-	-	-	-	-	-
NIPEDNLJ_00947	5.91e-125	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
NIPEDNLJ_00948	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
NIPEDNLJ_00949	3.82e-295	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
NIPEDNLJ_00950	1.45e-139	-	-	-	K	ko:K02525	-	ko00000,ko03000	Transcriptional regulator, LacI family
NIPEDNLJ_00951	2.49e-83	-	-	-	K	ko:K02525	-	ko00000,ko03000	Transcriptional regulator, LacI family
NIPEDNLJ_00952	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
NIPEDNLJ_00953	1.09e-122	-	-	-	-	-	-	-	-
NIPEDNLJ_00954	3.09e-35	-	-	-	-	-	-	-	-
NIPEDNLJ_00955	2.71e-81	asp1	-	-	S	-	-	-	Asp23 family, cell envelope-related function
NIPEDNLJ_00956	5.79e-112	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
NIPEDNLJ_00958	3.72e-65	-	-	-	-	-	-	-	-
NIPEDNLJ_00959	2.49e-87	-	-	-	S	-	-	-	Belongs to the HesB IscA family
NIPEDNLJ_00960	3.21e-180	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_00961	1.81e-222	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
NIPEDNLJ_00962	8.38e-103	-	-	-	F	-	-	-	NUDIX domain
NIPEDNLJ_00963	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NIPEDNLJ_00964	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NIPEDNLJ_00965	1.23e-135	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
NIPEDNLJ_00966	1.07e-209	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
NIPEDNLJ_00967	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NIPEDNLJ_00968	5.07e-203	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
NIPEDNLJ_00969	5.63e-178	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NIPEDNLJ_00970	1.71e-205	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NIPEDNLJ_00971	1.33e-47	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
NIPEDNLJ_00972	3.33e-140	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
NIPEDNLJ_00973	7.3e-216	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
NIPEDNLJ_00974	1.83e-195	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
NIPEDNLJ_00975	4.61e-138	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
NIPEDNLJ_00976	6.55e-117	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NIPEDNLJ_00977	2.85e-244	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NIPEDNLJ_00978	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_00979	4.53e-283	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
NIPEDNLJ_00980	3.04e-297	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
NIPEDNLJ_00981	6.01e-52	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
NIPEDNLJ_00982	9.51e-317	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
NIPEDNLJ_00983	1.49e-274	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
NIPEDNLJ_00984	2.64e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
NIPEDNLJ_00985	7.05e-53	-	-	-	M	-	-	-	Lysin motif
NIPEDNLJ_00986	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
NIPEDNLJ_00987	3.4e-143	-	-	-	S	-	-	-	Helix-turn-helix domain
NIPEDNLJ_00988	3.63e-52	-	-	-	S	-	-	-	Helix-turn-helix domain
NIPEDNLJ_00989	7.01e-129	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NIPEDNLJ_00990	8.63e-164	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
NIPEDNLJ_00991	5.49e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NIPEDNLJ_00992	9.25e-176	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NIPEDNLJ_00993	1.23e-84	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
NIPEDNLJ_00994	1.93e-210	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
NIPEDNLJ_00995	1.32e-215	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
NIPEDNLJ_00996	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
NIPEDNLJ_00997	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
NIPEDNLJ_00998	7.41e-62	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
NIPEDNLJ_00999	3.79e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
NIPEDNLJ_01000	3.18e-301	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
NIPEDNLJ_01001	1.1e-193	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NIPEDNLJ_01002	8.96e-160	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
NIPEDNLJ_01003	7.19e-280	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NIPEDNLJ_01004	2.54e-266	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
NIPEDNLJ_01005	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NIPEDNLJ_01006	2.42e-98	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NIPEDNLJ_01007	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
NIPEDNLJ_01008	2.14e-234	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
NIPEDNLJ_01009	2.5e-188	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
NIPEDNLJ_01010	8.91e-218	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NIPEDNLJ_01011	1.66e-77	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
NIPEDNLJ_01012	4.45e-109	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NIPEDNLJ_01013	1.1e-231	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
NIPEDNLJ_01014	6.25e-220	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
NIPEDNLJ_01015	7.69e-113	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
NIPEDNLJ_01016	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
NIPEDNLJ_01017	2.07e-303	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
NIPEDNLJ_01018	3.76e-237	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
NIPEDNLJ_01019	1.35e-91	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
NIPEDNLJ_01020	1e-31	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
NIPEDNLJ_01021	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
NIPEDNLJ_01022	5.15e-65	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_01023	1.77e-79	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_01024	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
NIPEDNLJ_01025	2.55e-212	-	-	-	G	-	-	-	Phosphotransferase enzyme family
NIPEDNLJ_01026	1.88e-101	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NIPEDNLJ_01027	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NIPEDNLJ_01028	1.17e-69	-	-	-	-	-	-	-	-
NIPEDNLJ_01029	3.22e-163	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
NIPEDNLJ_01030	1.89e-228	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
NIPEDNLJ_01031	3.36e-77	-	-	-	-	-	-	-	-
NIPEDNLJ_01032	1.86e-219	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
NIPEDNLJ_01034	2.49e-255	-	-	-	C	-	-	-	Belongs to the LDH2 MDH2 oxidoreductase family
NIPEDNLJ_01035	0.0	pepD3	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
NIPEDNLJ_01036	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
NIPEDNLJ_01037	1.09e-273	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
NIPEDNLJ_01038	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
NIPEDNLJ_01039	6.65e-117	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NIPEDNLJ_01040	1.13e-247	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NIPEDNLJ_01041	1.79e-84	-	-	-	-	-	-	-	-
NIPEDNLJ_01042	1.33e-226	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
NIPEDNLJ_01043	1.36e-212	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NIPEDNLJ_01044	2.3e-76	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NIPEDNLJ_01045	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NIPEDNLJ_01046	7.97e-65	ylxQ	-	-	J	-	-	-	ribosomal protein
NIPEDNLJ_01047	5.93e-60	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
NIPEDNLJ_01048	1.38e-273	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
NIPEDNLJ_01049	1.5e-106	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
NIPEDNLJ_01050	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NIPEDNLJ_01051	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
NIPEDNLJ_01052	8.1e-299	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
NIPEDNLJ_01053	5.83e-178	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
NIPEDNLJ_01054	1.29e-182	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NIPEDNLJ_01055	8.54e-123	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
NIPEDNLJ_01056	2.97e-167	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
NIPEDNLJ_01057	3.14e-197	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NIPEDNLJ_01058	2.91e-183	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
NIPEDNLJ_01059	1.62e-230	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NIPEDNLJ_01060	9.65e-65	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
NIPEDNLJ_01061	1.62e-179	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
NIPEDNLJ_01062	3.72e-152	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
NIPEDNLJ_01063	1.6e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
NIPEDNLJ_01064	2.7e-47	ynzC	-	-	S	-	-	-	UPF0291 protein
NIPEDNLJ_01065	2.52e-148	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NIPEDNLJ_01066	2.17e-265	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
NIPEDNLJ_01067	7.21e-164	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NIPEDNLJ_01069	3.77e-123	-	-	-	-	-	-	-	-
NIPEDNLJ_01070	1.25e-119	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NIPEDNLJ_01071	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
NIPEDNLJ_01072	9.7e-198	fabG	1.1.1.100	-	S	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
NIPEDNLJ_01073	2.79e-225	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
NIPEDNLJ_01074	4.75e-316	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NIPEDNLJ_01075	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NIPEDNLJ_01076	8.61e-19	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NIPEDNLJ_01077	4.93e-20	-	-	-	-	-	-	-	-
NIPEDNLJ_01078	1.11e-78	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
NIPEDNLJ_01079	2.01e-139	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
NIPEDNLJ_01080	5.9e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NIPEDNLJ_01081	5.54e-303	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
NIPEDNLJ_01082	4.94e-288	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NIPEDNLJ_01083	2.07e-207	-	-	-	S	-	-	-	Tetratricopeptide repeat
NIPEDNLJ_01084	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NIPEDNLJ_01085	1.74e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NIPEDNLJ_01086	1.44e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
NIPEDNLJ_01087	2.27e-200	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
NIPEDNLJ_01088	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
NIPEDNLJ_01089	2.47e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
NIPEDNLJ_01090	4.83e-138	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
NIPEDNLJ_01091	2.03e-250	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
NIPEDNLJ_01092	3.05e-116	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NIPEDNLJ_01093	4.59e-127	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
NIPEDNLJ_01094	6.37e-60	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
NIPEDNLJ_01095	6.19e-283	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
NIPEDNLJ_01096	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
NIPEDNLJ_01097	4.59e-173	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
NIPEDNLJ_01098	1.32e-59	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
NIPEDNLJ_01099	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
NIPEDNLJ_01100	1.23e-310	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
NIPEDNLJ_01101	1.34e-231	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
NIPEDNLJ_01102	6.71e-265	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
NIPEDNLJ_01103	2.78e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NIPEDNLJ_01104	1.54e-101	-	-	-	-	-	-	-	-
NIPEDNLJ_01105	9.99e-44	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
NIPEDNLJ_01106	2.92e-230	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic
NIPEDNLJ_01107	4.37e-39	-	-	-	-	-	-	-	-
NIPEDNLJ_01108	2.51e-217	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
NIPEDNLJ_01110	2.15e-75	-	-	-	-	-	-	-	-
NIPEDNLJ_01111	3.74e-265	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
NIPEDNLJ_01112	1.1e-279	yojA	-	-	EG	ko:K03299	-	ko00000,ko02000	GntP family permease
NIPEDNLJ_01113	1.07e-75	-	-	-	KT	ko:K02647	-	ko00000,ko03000	Putative sugar diacid recognition
NIPEDNLJ_01114	1.56e-05	-	-	-	QT	-	-	-	Purine catabolism regulatory protein-like family
NIPEDNLJ_01115	1.77e-221	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01116	4.47e-255	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NIPEDNLJ_01117	5.91e-279	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NIPEDNLJ_01118	9e-181	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
NIPEDNLJ_01119	1.32e-222	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NIPEDNLJ_01120	2.32e-283	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
NIPEDNLJ_01121	4.39e-110	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
NIPEDNLJ_01122	3.81e-310	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
NIPEDNLJ_01123	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
NIPEDNLJ_01124	2.6e-233	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NIPEDNLJ_01125	3.49e-222	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NIPEDNLJ_01126	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
NIPEDNLJ_01127	5.21e-155	-	-	-	S	-	-	-	repeat protein
NIPEDNLJ_01128	5.71e-159	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
NIPEDNLJ_01129	6.17e-286	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
NIPEDNLJ_01130	5.58e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
NIPEDNLJ_01131	1.1e-278	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
NIPEDNLJ_01132	6.59e-160	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NIPEDNLJ_01133	1.19e-25	-	-	-	-	-	-	-	-
NIPEDNLJ_01134	5.01e-129	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
NIPEDNLJ_01135	5.69e-44	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
NIPEDNLJ_01136	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NIPEDNLJ_01137	8.87e-101	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
NIPEDNLJ_01138	3.71e-190	ylmH	-	-	S	-	-	-	S4 domain protein
NIPEDNLJ_01139	3.2e-54	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
NIPEDNLJ_01140	4.51e-92	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
NIPEDNLJ_01141	8.44e-284	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NIPEDNLJ_01142	0.0	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
NIPEDNLJ_01143	5.77e-184	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
NIPEDNLJ_01144	1.98e-258	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NIPEDNLJ_01145	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NIPEDNLJ_01146	9.02e-229	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NIPEDNLJ_01147	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
NIPEDNLJ_01148	9.94e-73	ftsL	-	-	D	-	-	-	Cell division protein FtsL
NIPEDNLJ_01149	3.58e-207	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
NIPEDNLJ_01150	1.5e-101	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
NIPEDNLJ_01151	6.9e-77	-	-	-	-	-	-	-	-
NIPEDNLJ_01152	4.47e-16	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
NIPEDNLJ_01153	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
NIPEDNLJ_01154	1.53e-123	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
NIPEDNLJ_01155	3.32e-205	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
NIPEDNLJ_01156	1.88e-251	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
NIPEDNLJ_01158	2.8e-81	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
NIPEDNLJ_01159	3.44e-12	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
NIPEDNLJ_01160	2.03e-141	-	-	-	L	-	-	-	Bacterial dnaA protein
NIPEDNLJ_01161	7.04e-170	-	-	-	L	-	-	-	Integrase core domain
NIPEDNLJ_01162	1.19e-188	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
NIPEDNLJ_01165	9.29e-220	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
NIPEDNLJ_01166	1.2e-195	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NIPEDNLJ_01167	7.45e-150	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
NIPEDNLJ_01168	3.29e-146	yjbH	-	-	Q	-	-	-	Thioredoxin
NIPEDNLJ_01169	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
NIPEDNLJ_01170	1.09e-251	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
NIPEDNLJ_01171	6.56e-151	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
NIPEDNLJ_01172	2.87e-88	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
NIPEDNLJ_01173	5.33e-103	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
NIPEDNLJ_01174	9.01e-287	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
NIPEDNLJ_01175	5.74e-70	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
NIPEDNLJ_01176	1.04e-31	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
NIPEDNLJ_01199	1.83e-149	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
NIPEDNLJ_01200	8.43e-131	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
NIPEDNLJ_01201	4.76e-170	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
NIPEDNLJ_01202	2.66e-120	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
NIPEDNLJ_01203	1.21e-143	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
NIPEDNLJ_01204	4.36e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NIPEDNLJ_01205	1.63e-182	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
NIPEDNLJ_01207	1.88e-91	-	-	-	-	ko:K02248	-	ko00000,ko00002,ko02044	-
NIPEDNLJ_01208	1.96e-55	-	-	-	-	-	-	-	-
NIPEDNLJ_01209	2.89e-100	-	-	-	NU	ko:K02246	-	ko00000,ko00002,ko02044	general secretion pathway protein
NIPEDNLJ_01210	1.27e-61	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
NIPEDNLJ_01211	1.75e-232	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
NIPEDNLJ_01212	9.82e-234	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
NIPEDNLJ_01213	1.82e-94	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
NIPEDNLJ_01214	8.26e-60	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
NIPEDNLJ_01215	2.13e-174	-	-	-	-	-	-	-	-
NIPEDNLJ_01216	3.16e-153	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
NIPEDNLJ_01217	2.24e-65	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
NIPEDNLJ_01218	8.87e-269	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
NIPEDNLJ_01219	4.12e-72	-	-	-	-	-	-	-	-
NIPEDNLJ_01220	8.88e-71	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
NIPEDNLJ_01221	7.58e-189	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
NIPEDNLJ_01222	1.02e-193	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
NIPEDNLJ_01223	8.55e-99	ykuL	-	-	S	-	-	-	(CBS) domain
NIPEDNLJ_01224	4.72e-120	-	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
NIPEDNLJ_01225	2.44e-135	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NIPEDNLJ_01226	6.89e-189	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
NIPEDNLJ_01227	5.82e-124	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
NIPEDNLJ_01228	2.86e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
NIPEDNLJ_01229	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
NIPEDNLJ_01230	5.88e-121	cvpA	-	-	S	-	-	-	Colicin V production protein
NIPEDNLJ_01231	3.75e-63	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
NIPEDNLJ_01232	3.62e-100	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NIPEDNLJ_01233	8.03e-58	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
NIPEDNLJ_01234	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NIPEDNLJ_01235	0.0	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
NIPEDNLJ_01236	2.15e-234	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
NIPEDNLJ_01237	1.44e-59	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
NIPEDNLJ_01238	4.16e-240	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
NIPEDNLJ_01239	3.34e-243	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
NIPEDNLJ_01240	4.34e-131	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
NIPEDNLJ_01241	2.58e-61	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NIPEDNLJ_01242	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NIPEDNLJ_01243	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NIPEDNLJ_01244	2.29e-276	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
NIPEDNLJ_01245	2.2e-251	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NIPEDNLJ_01246	1.13e-289	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
NIPEDNLJ_01247	1.16e-133	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NIPEDNLJ_01248	1.26e-191	-	-	-	S	-	-	-	Helix-turn-helix domain
NIPEDNLJ_01249	8.66e-316	ymfH	-	-	S	-	-	-	Peptidase M16
NIPEDNLJ_01250	5.36e-288	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
NIPEDNLJ_01251	3.32e-204	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
NIPEDNLJ_01252	1.45e-151	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_01253	4.45e-141	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
NIPEDNLJ_01254	1.69e-120	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
NIPEDNLJ_01255	3.82e-195	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
NIPEDNLJ_01256	8.33e-230	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
NIPEDNLJ_01257	4.2e-157	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
NIPEDNLJ_01258	2.18e-305	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
NIPEDNLJ_01259	2.47e-292	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
NIPEDNLJ_01260	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NIPEDNLJ_01261	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
NIPEDNLJ_01262	5.45e-233	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
NIPEDNLJ_01263	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
NIPEDNLJ_01264	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
NIPEDNLJ_01265	1.37e-290	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NIPEDNLJ_01266	1.18e-272	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
NIPEDNLJ_01267	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
NIPEDNLJ_01268	5.96e-139	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NIPEDNLJ_01269	9.33e-152	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_01270	8.15e-166	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_01271	3.08e-181	gadC	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
NIPEDNLJ_01272	4.6e-118	gadC	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
NIPEDNLJ_01273	1.62e-201	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
NIPEDNLJ_01274	1.69e-102	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
NIPEDNLJ_01275	1.01e-141	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
NIPEDNLJ_01276	1.97e-99	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
NIPEDNLJ_01277	2.81e-225	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
NIPEDNLJ_01278	1.56e-47	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
NIPEDNLJ_01279	6.17e-38	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
NIPEDNLJ_01280	4.05e-84	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
NIPEDNLJ_01281	1.31e-126	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
NIPEDNLJ_01282	2.68e-36	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
NIPEDNLJ_01283	1.62e-178	-	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
NIPEDNLJ_01284	6.9e-179	-	-	-	S	-	-	-	Membrane
NIPEDNLJ_01285	1.36e-96	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase
NIPEDNLJ_01286	9.79e-29	-	-	-	-	-	-	-	-
NIPEDNLJ_01287	7.94e-109	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
NIPEDNLJ_01288	2.56e-307	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
NIPEDNLJ_01289	1.04e-60	-	-	-	-	-	-	-	-
NIPEDNLJ_01290	1.95e-109	uspA	-	-	T	-	-	-	universal stress protein
NIPEDNLJ_01291	2.35e-84	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01292	1.49e-190	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
NIPEDNLJ_01293	8.58e-134	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_01294	7.38e-274	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
NIPEDNLJ_01295	8.55e-64	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
NIPEDNLJ_01296	9.49e-282	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
NIPEDNLJ_01297	4.61e-44	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
NIPEDNLJ_01298	2.57e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
NIPEDNLJ_01299	4.97e-307	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NIPEDNLJ_01300	1.76e-45	ywzB	-	-	S	-	-	-	Protein of unknown function (DUF1146)
NIPEDNLJ_01301	7.36e-89	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
NIPEDNLJ_01302	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NIPEDNLJ_01303	7.51e-212	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NIPEDNLJ_01304	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NIPEDNLJ_01305	6.84e-121	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NIPEDNLJ_01306	1.07e-95	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NIPEDNLJ_01307	1.26e-29	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NIPEDNLJ_01308	4.63e-162	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
NIPEDNLJ_01309	1.39e-294	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
NIPEDNLJ_01310	2e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
NIPEDNLJ_01311	1.58e-244	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
NIPEDNLJ_01312	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NIPEDNLJ_01313	6.68e-150	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NIPEDNLJ_01314	1.22e-291	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NIPEDNLJ_01315	1.09e-250	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
NIPEDNLJ_01316	2.35e-211	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
NIPEDNLJ_01317	1.73e-248	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NIPEDNLJ_01318	6.8e-140	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
NIPEDNLJ_01319	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Mur ligase, middle domain
NIPEDNLJ_01320	4e-172	-	-	-	S	ko:K07009	-	ko00000	CobB/CobQ-like glutamine amidotransferase domain
NIPEDNLJ_01321	3.26e-296	potE	-	-	U	ko:K03756,ko:K03758	-	ko00000,ko02000	Amino acid permease
NIPEDNLJ_01322	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
NIPEDNLJ_01323	6.17e-104	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
NIPEDNLJ_01324	1.7e-302	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
NIPEDNLJ_01325	1e-228	ampC	-	-	V	-	-	-	Beta-lactamase
NIPEDNLJ_01326	8.61e-66	-	-	-	-	-	-	-	-
NIPEDNLJ_01327	0.0	-	-	-	M	-	-	-	domain protein
NIPEDNLJ_01328	6.05e-134	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_01329	7.44e-150	-	-	-	M	-	-	-	domain protein
NIPEDNLJ_01330	1.52e-130	-	-	-	-	-	-	-	-
NIPEDNLJ_01332	1.1e-51	nhaP3	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
NIPEDNLJ_01333	1.28e-75	-	-	-	-	-	-	-	-
NIPEDNLJ_01335	5.22e-112	-	-	-	-	-	-	-	-
NIPEDNLJ_01336	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
NIPEDNLJ_01337	1.27e-64	-	-	-	S	-	-	-	Cupredoxin-like domain
NIPEDNLJ_01338	5.13e-70	-	-	-	S	-	-	-	Cupredoxin-like domain
NIPEDNLJ_01339	8.55e-135	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
NIPEDNLJ_01340	9.11e-208	-	-	-	EG	-	-	-	EamA-like transporter family
NIPEDNLJ_01341	1.37e-221	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
NIPEDNLJ_01342	9.21e-244	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NIPEDNLJ_01343	6.16e-198	-	-	-	KT	ko:K07719	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	YcbB domain
NIPEDNLJ_01344	5.02e-36	xylB	2.7.1.17, 2.7.1.53	-	G	ko:K00854,ko:K00880	ko00040,ko00053,ko01100,map00040,map00053,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the FGGY kinase family
NIPEDNLJ_01346	2.69e-36	-	-	-	-	-	-	-	-
NIPEDNLJ_01347	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
NIPEDNLJ_01348	9.5e-142	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
NIPEDNLJ_01349	1.06e-197	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
NIPEDNLJ_01350	0.0	yclK	-	-	T	-	-	-	Histidine kinase
NIPEDNLJ_01351	2.81e-174	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
NIPEDNLJ_01352	2.58e-54	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NIPEDNLJ_01357	7.06e-36	-	-	-	S	-	-	-	YoeB-like toxin of bacterial type II toxin-antitoxin system
NIPEDNLJ_01358	7.15e-38	-	-	-	D	-	-	-	Antitoxin component of a toxin-antitoxin (TA) module
NIPEDNLJ_01359	9.83e-36	-	-	-	-	-	-	-	-
NIPEDNLJ_01362	7.55e-54	-	-	-	-	-	-	-	-
NIPEDNLJ_01363	2.25e-07	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
NIPEDNLJ_01369	5.95e-238	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01371	4.93e-108	lytE	-	-	M	-	-	-	Lysin motif
NIPEDNLJ_01372	8.71e-92	-	-	-	S	-	-	-	Cof-like hydrolase
NIPEDNLJ_01373	4.51e-68	-	-	-	S	-	-	-	Cof-like hydrolase
NIPEDNLJ_01374	6.2e-103	-	-	-	K	-	-	-	Transcriptional regulator
NIPEDNLJ_01375	0.0	oatA	-	-	I	-	-	-	Acyltransferase
NIPEDNLJ_01376	3e-69	-	-	-	-	-	-	-	-
NIPEDNLJ_01377	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NIPEDNLJ_01378	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NIPEDNLJ_01379	2.8e-162	ybbR	-	-	S	-	-	-	YbbR-like protein
NIPEDNLJ_01380	6.61e-195	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
NIPEDNLJ_01381	0.0	fucP	-	-	G	ko:K02429	-	ko00000,ko02000	Major Facilitator Superfamily
NIPEDNLJ_01382	1.01e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
NIPEDNLJ_01383	1.31e-213	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NIPEDNLJ_01384	2.17e-212	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
NIPEDNLJ_01385	1.82e-111	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_01386	1.51e-132	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
NIPEDNLJ_01387	2.92e-98	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
NIPEDNLJ_01388	1.46e-112	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
NIPEDNLJ_01389	6.95e-105	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
NIPEDNLJ_01390	1.38e-228	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
NIPEDNLJ_01391	1.84e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NIPEDNLJ_01392	5.56e-136	-	-	-	-	-	-	-	-
NIPEDNLJ_01393	7.73e-109	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
NIPEDNLJ_01394	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
NIPEDNLJ_01395	3.36e-168	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
NIPEDNLJ_01396	1.43e-47	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
NIPEDNLJ_01397	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
NIPEDNLJ_01398	7.23e-316	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
NIPEDNLJ_01399	0.0	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
NIPEDNLJ_01400	5.9e-181	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NIPEDNLJ_01401	4.41e-289	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
NIPEDNLJ_01402	1.31e-243	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
NIPEDNLJ_01404	4.72e-134	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NIPEDNLJ_01405	6.34e-84	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01406	1.83e-21	-	-	-	-	-	-	-	-
NIPEDNLJ_01408	1.59e-217	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
NIPEDNLJ_01409	9.5e-238	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
NIPEDNLJ_01410	1.63e-207	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
NIPEDNLJ_01411	3.67e-316	steT	-	-	E	ko:K03294	-	ko00000	amino acid
NIPEDNLJ_01412	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
NIPEDNLJ_01413	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NIPEDNLJ_01414	1.03e-19	-	-	-	-	-	-	-	-
NIPEDNLJ_01415	1.02e-149	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
NIPEDNLJ_01416	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
NIPEDNLJ_01417	9.93e-115	ykhA	3.1.2.20	-	I	ko:K01073	-	ko00000,ko01000	Thioesterase superfamily
NIPEDNLJ_01418	1.15e-205	-	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	PFAM extracellular solute-binding protein, family 3
NIPEDNLJ_01419	2.13e-258	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
NIPEDNLJ_01420	7.95e-221	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
NIPEDNLJ_01421	3.92e-215	lutA	-	-	C	ko:K18928	-	ko00000	Cysteine-rich domain
NIPEDNLJ_01422	0.0	lutB	-	-	C	ko:K18929	-	ko00000	4Fe-4S dicluster domain
NIPEDNLJ_01423	1.44e-174	lutC	-	-	S	ko:K00782	-	ko00000	LUD domain
NIPEDNLJ_01424	1.08e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
NIPEDNLJ_01425	9.42e-234	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
NIPEDNLJ_01426	1.92e-199	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NIPEDNLJ_01427	3.96e-226	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
NIPEDNLJ_01428	1.88e-68	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
NIPEDNLJ_01429	4.27e-66	-	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
NIPEDNLJ_01430	1.58e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NIPEDNLJ_01431	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NIPEDNLJ_01432	3.01e-125	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NIPEDNLJ_01433	9.64e-120	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
NIPEDNLJ_01434	9.38e-317	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
NIPEDNLJ_01435	3.54e-140	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
NIPEDNLJ_01436	2.18e-58	-	-	-	EGP	-	-	-	Major Facilitator
NIPEDNLJ_01437	5.78e-194	-	-	-	EGP	-	-	-	Major Facilitator
NIPEDNLJ_01438	4.9e-86	-	-	-	K	-	-	-	Transcriptional regulator
NIPEDNLJ_01439	1.8e-292	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_01440	4.91e-80	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_01441	1.53e-52	-	-	-	-	-	-	-	-
NIPEDNLJ_01442	0.0	ydaO	-	-	E	-	-	-	amino acid
NIPEDNLJ_01443	0.0	-	-	-	E	-	-	-	amino acid
NIPEDNLJ_01444	7.32e-105	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
NIPEDNLJ_01445	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
NIPEDNLJ_01446	1.83e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NIPEDNLJ_01448	1.71e-75	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
NIPEDNLJ_01449	1.82e-43	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
NIPEDNLJ_01450	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
NIPEDNLJ_01451	4.85e-232	ykpB	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NIPEDNLJ_01452	5.13e-288	mtnE	-	-	E	ko:K08969	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NIPEDNLJ_01453	7.09e-179	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Carbon-nitrogen hydrolase
NIPEDNLJ_01454	1.48e-176	proB	2.7.2.11	-	F	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NIPEDNLJ_01455	8.21e-287	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NIPEDNLJ_01456	8.51e-169	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NIPEDNLJ_01457	4.54e-255	tnp2	-	-	L	-	-	-	PFAM Transposase, IS204 IS1001 IS1096 IS1165
NIPEDNLJ_01458	2.77e-249	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NIPEDNLJ_01459	1.96e-131	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
NIPEDNLJ_01460	1.04e-161	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
NIPEDNLJ_01461	2.35e-244	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
NIPEDNLJ_01462	4.21e-218	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
NIPEDNLJ_01463	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NIPEDNLJ_01464	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
NIPEDNLJ_01465	6.81e-173	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
NIPEDNLJ_01466	1.24e-197	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NIPEDNLJ_01467	1.77e-74	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
NIPEDNLJ_01468	9.74e-231	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
NIPEDNLJ_01469	1.64e-68	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
NIPEDNLJ_01470	3.41e-144	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NIPEDNLJ_01471	2.71e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
NIPEDNLJ_01472	1.65e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NIPEDNLJ_01473	5.87e-62	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NIPEDNLJ_01474	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NIPEDNLJ_01475	4.42e-293	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_01476	3.85e-76	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_01477	1.16e-114	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
NIPEDNLJ_01478	9.33e-48	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
NIPEDNLJ_01479	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NIPEDNLJ_01480	7.68e-254	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NIPEDNLJ_01481	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
NIPEDNLJ_01482	9.28e-170	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
NIPEDNLJ_01483	1.04e-124	-	-	-	S	-	-	-	Protein of unknown function (DUF1700)
NIPEDNLJ_01484	4.63e-74	XK27_06915	-	-	K	ko:K10947	-	ko00000,ko03000	transcriptional regulator PadR family
NIPEDNLJ_01485	3.29e-62	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
NIPEDNLJ_01486	1.32e-64	-	-	-	-	-	-	-	-
NIPEDNLJ_01487	2.46e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
NIPEDNLJ_01488	3.6e-107	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NIPEDNLJ_01489	3e-222	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
NIPEDNLJ_01490	4.01e-22	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
NIPEDNLJ_01491	1.19e-195	-	-	-	M	-	-	-	Glycosyl transferase family group 2
NIPEDNLJ_01492	7.72e-42	-	-	-	M	-	-	-	Glycosyl transferase family group 2
NIPEDNLJ_01493	7.4e-135	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_01495	1.47e-285	aadAT	-	-	EK	ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko01000	Aminotransferase, class I
NIPEDNLJ_01496	8.31e-158	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
NIPEDNLJ_01497	1.39e-92	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NIPEDNLJ_01498	1.1e-126	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
NIPEDNLJ_01499	7.11e-32	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
NIPEDNLJ_01500	9.18e-31	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
NIPEDNLJ_01501	1.82e-175	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NIPEDNLJ_01502	3.58e-93	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
NIPEDNLJ_01503	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
NIPEDNLJ_01504	5.49e-262	yacL	-	-	S	-	-	-	domain protein
NIPEDNLJ_01505	3.98e-304	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NIPEDNLJ_01506	1.02e-130	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
NIPEDNLJ_01507	4.73e-66	yjdJ	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
NIPEDNLJ_01508	4.84e-160	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NIPEDNLJ_01509	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
NIPEDNLJ_01510	3.37e-178	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
NIPEDNLJ_01511	4.11e-172	-	-	-	E	ko:K10010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_01512	3.36e-154	tcyB	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
NIPEDNLJ_01513	6.07e-274	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
NIPEDNLJ_01514	1.42e-212	-	-	-	I	-	-	-	alpha/beta hydrolase fold
NIPEDNLJ_01515	5.05e-171	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NIPEDNLJ_01516	0.0	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
NIPEDNLJ_01517	3.71e-235	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
NIPEDNLJ_01518	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
NIPEDNLJ_01519	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_01521	3.08e-107	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
NIPEDNLJ_01522	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
NIPEDNLJ_01523	2.15e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
NIPEDNLJ_01524	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NIPEDNLJ_01525	2.05e-164	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
NIPEDNLJ_01526	3.53e-168	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
NIPEDNLJ_01527	0.0	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
NIPEDNLJ_01528	1.07e-315	-	-	-	EGP	-	-	-	Major Facilitator
NIPEDNLJ_01529	1.09e-143	-	-	-	-	-	-	-	-
NIPEDNLJ_01532	4.13e-190	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
NIPEDNLJ_01533	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
NIPEDNLJ_01537	2.4e-19	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
NIPEDNLJ_01538	1.8e-292	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_01539	1.41e-79	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_01543	7.36e-110	-	-	-	-	-	-	-	-
NIPEDNLJ_01544	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
NIPEDNLJ_01545	6.21e-241	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NIPEDNLJ_01546	9.26e-218	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NIPEDNLJ_01547	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NIPEDNLJ_01548	8.67e-124	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
NIPEDNLJ_01549	0.0	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
NIPEDNLJ_01550	5.75e-103	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
NIPEDNLJ_01551	9.17e-217	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01552	1.02e-74	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
NIPEDNLJ_01553	1.01e-52	yabO	-	-	J	-	-	-	S4 domain protein
NIPEDNLJ_01554	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NIPEDNLJ_01555	1.13e-131	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
NIPEDNLJ_01556	3.29e-146	-	-	-	S	-	-	-	(CBS) domain
NIPEDNLJ_01557	4.85e-187	mhpD	-	-	Q	ko:K02509	ko00350,ko01120,map00350,map01120	ko00000,ko00001,ko01000	hydratase
NIPEDNLJ_01558	1.59e-308	codA	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	cytosine deaminase
NIPEDNLJ_01559	0.0	-	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
NIPEDNLJ_01560	1.3e-82	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
NIPEDNLJ_01561	2.85e-265	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NIPEDNLJ_01562	8.96e-79	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
NIPEDNLJ_01563	4.54e-09	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
NIPEDNLJ_01564	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
NIPEDNLJ_01565	6.38e-300	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
NIPEDNLJ_01566	1e-47	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
NIPEDNLJ_01567	0.0	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
NIPEDNLJ_01568	1.93e-189	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
NIPEDNLJ_01569	2.22e-205	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
NIPEDNLJ_01570	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
NIPEDNLJ_01571	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
NIPEDNLJ_01572	3.7e-204	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
NIPEDNLJ_01573	4.93e-123	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
NIPEDNLJ_01574	6.66e-113	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NIPEDNLJ_01575	1.84e-155	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
NIPEDNLJ_01576	5.32e-208	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
NIPEDNLJ_01577	8.28e-177	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NIPEDNLJ_01578	2.83e-194	-	-	-	G	-	-	-	Right handed beta helix region
NIPEDNLJ_01579	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
NIPEDNLJ_01580	1.18e-159	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
NIPEDNLJ_01581	1.47e-209	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
NIPEDNLJ_01582	2.42e-298	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NIPEDNLJ_01583	9.43e-56	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
NIPEDNLJ_01584	1.11e-301	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NIPEDNLJ_01585	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
NIPEDNLJ_01586	2.44e-84	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
NIPEDNLJ_01587	3.15e-71	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
NIPEDNLJ_01588	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
NIPEDNLJ_01589	5.16e-292	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_01590	1.41e-79	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_01591	3.54e-190	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
NIPEDNLJ_01592	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
NIPEDNLJ_01593	1.82e-187	yidA	-	-	S	-	-	-	hydrolase
NIPEDNLJ_01594	1.19e-98	-	-	-	-	-	-	-	-
NIPEDNLJ_01595	3.53e-229	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NIPEDNLJ_01596	3.54e-311	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NIPEDNLJ_01597	2.09e-190	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
NIPEDNLJ_01598	1.75e-165	-	-	-	U	ko:K02075	-	ko00000,ko00002,ko02000	ABC 3 transport family
NIPEDNLJ_01599	3.5e-84	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
NIPEDNLJ_01600	1.8e-27	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
NIPEDNLJ_01601	2.75e-213	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
NIPEDNLJ_01602	1.71e-206	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NIPEDNLJ_01603	2.74e-50	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
NIPEDNLJ_01604	4.17e-205	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
NIPEDNLJ_01605	8.57e-128	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
NIPEDNLJ_01606	1.2e-196	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
NIPEDNLJ_01607	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NIPEDNLJ_01608	1.17e-165	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
NIPEDNLJ_01610	8.39e-168	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
NIPEDNLJ_01611	1.05e-225	-	-	-	-	-	-	-	-
NIPEDNLJ_01612	5.33e-286	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
NIPEDNLJ_01613	1.25e-214	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
NIPEDNLJ_01614	3.2e-242	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
NIPEDNLJ_01615	2.56e-43	-	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
NIPEDNLJ_01616	3.86e-178	-	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
NIPEDNLJ_01617	4.08e-106	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
NIPEDNLJ_01618	0.0	-	-	-	L	-	-	-	DNA helicase
NIPEDNLJ_01619	7.77e-261	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
NIPEDNLJ_01621	0.0	gabT	2.6.1.19, 5.1.1.21	-	E	ko:K00823,ko:K20708	ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NIPEDNLJ_01622	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
NIPEDNLJ_01623	1.64e-151	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NIPEDNLJ_01624	5.74e-54	-	1.3.5.4	-	S	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FMN binding
NIPEDNLJ_01625	3.74e-179	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01626	1.7e-280	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	transporter
NIPEDNLJ_01627	4.93e-215	hdhL	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
NIPEDNLJ_01628	5.29e-38	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
NIPEDNLJ_01629	6.08e-149	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
NIPEDNLJ_01630	8.16e-243	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NIPEDNLJ_01631	5.25e-140	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NIPEDNLJ_01632	2.2e-272	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
NIPEDNLJ_01633	3.36e-145	eriC	-	-	P	ko:K03281	-	ko00000	chloride
NIPEDNLJ_01634	1.45e-56	eriC	-	-	P	ko:K03281	-	ko00000	chloride
NIPEDNLJ_01635	2.48e-274	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_01636	1.53e-82	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_01637	7.7e-104	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
NIPEDNLJ_01638	2.19e-135	-	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, permease protein
NIPEDNLJ_01639	3.69e-183	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_01640	6.73e-139	proWZ	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NIPEDNLJ_01641	3.75e-132	proWY	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, QAT family
NIPEDNLJ_01642	1.31e-58	proWY	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, QAT family
NIPEDNLJ_01643	2.24e-96	ywnA	-	-	K	-	-	-	Transcriptional regulator
NIPEDNLJ_01644	1.46e-65	-	-	-	GM	-	-	-	NAD(P)H-binding
NIPEDNLJ_01645	9.33e-152	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_01646	4.89e-166	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_01647	4.91e-80	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_01648	1.73e-290	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_01649	1.21e-159	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
NIPEDNLJ_01650	0.0	cadA	-	-	P	-	-	-	P-type ATPase
NIPEDNLJ_01651	3.29e-279	-	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Metalloenzyme superfamily
NIPEDNLJ_01652	4.44e-11	-	-	-	-	-	-	-	-
NIPEDNLJ_01653	4.42e-157	-	-	-	-	-	-	-	-
NIPEDNLJ_01654	2.73e-71	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
NIPEDNLJ_01655	4.48e-312	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
NIPEDNLJ_01657	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
NIPEDNLJ_01658	2.96e-106	-	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	PAP2 superfamily
NIPEDNLJ_01659	3.13e-226	ydhF	-	-	S	-	-	-	Aldo keto reductase
NIPEDNLJ_01660	0.0	galA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
NIPEDNLJ_01661	1.53e-110	-	-	-	S	-	-	-	Membrane
NIPEDNLJ_01662	9.23e-185	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
NIPEDNLJ_01664	4.38e-179	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NIPEDNLJ_01665	1.26e-82	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
NIPEDNLJ_01666	2.52e-35	-	-	-	S	ko:K07002	-	ko00000	Serine hydrolase
NIPEDNLJ_01667	5.56e-55	-	-	-	S	ko:K07002	-	ko00000	Serine hydrolase
NIPEDNLJ_01669	6.87e-233	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NIPEDNLJ_01670	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
NIPEDNLJ_01671	2.3e-52	-	-	-	S	-	-	-	Cytochrome b5-like Heme/Steroid binding domain
NIPEDNLJ_01672	1.84e-129	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
NIPEDNLJ_01673	3.36e-165	-	-	-	IQ	-	-	-	dehydrogenase reductase
NIPEDNLJ_01674	6.78e-306	-	-	-	EGP	-	-	-	MFS transporter, metabolite H symporter (MHS) family protein
NIPEDNLJ_01675	0.0	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_01676	0.0	-	-	-	M	-	-	-	Rib/alpha-like repeat
NIPEDNLJ_01677	6.66e-161	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NIPEDNLJ_01680	3.65e-75	-	-	-	L	-	-	-	Resolvase, N terminal domain
NIPEDNLJ_01686	2.68e-85	-	-	-	K	-	-	-	Putative DNA-binding domain
NIPEDNLJ_01687	4.45e-110	hsdS	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
NIPEDNLJ_01688	2.59e-135	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_01689	1.27e-277	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
NIPEDNLJ_01690	8.8e-241	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
NIPEDNLJ_01691	5.65e-275	yuxL	3.4.19.1	-	E	ko:K01303	-	ko00000,ko01000,ko01002	Prolyl oligopeptidase family
NIPEDNLJ_01692	1.12e-202	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
NIPEDNLJ_01693	1.26e-174	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
NIPEDNLJ_01694	4.66e-209	oppD	-	-	P	ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
NIPEDNLJ_01695	1.42e-165	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NIPEDNLJ_01696	5.91e-184	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NIPEDNLJ_01697	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
NIPEDNLJ_01698	1.48e-137	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
NIPEDNLJ_01699	9.02e-145	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
NIPEDNLJ_01701	9.52e-58	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_01702	1.09e-16	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_01704	6.7e-303	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NIPEDNLJ_01705	1.12e-226	-	-	-	-	-	-	-	-
NIPEDNLJ_01706	5.27e-169	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NIPEDNLJ_01707	1.37e-308	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
NIPEDNLJ_01708	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
NIPEDNLJ_01709	2.37e-135	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NIPEDNLJ_01710	4.6e-249	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
NIPEDNLJ_01711	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NIPEDNLJ_01712	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NIPEDNLJ_01713	1.98e-163	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NIPEDNLJ_01714	2.61e-49	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NIPEDNLJ_01715	4.3e-169	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
NIPEDNLJ_01716	0.0	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NIPEDNLJ_01717	5.01e-275	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NIPEDNLJ_01718	8.95e-110	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NIPEDNLJ_01719	1.22e-127	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
NIPEDNLJ_01720	2.08e-218	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
NIPEDNLJ_01721	6.23e-233	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
NIPEDNLJ_01722	9.67e-31	rhaS4	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
NIPEDNLJ_01723	6.08e-164	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Belongs to the alpha-acetolactate decarboxylase family
NIPEDNLJ_01724	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
NIPEDNLJ_01725	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
NIPEDNLJ_01726	3.86e-223	ydbI	-	-	K	-	-	-	AI-2E family transporter
NIPEDNLJ_01727	1.64e-291	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
NIPEDNLJ_01728	1.85e-122	ribB	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NIPEDNLJ_01729	4.5e-149	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
NIPEDNLJ_01730	1.51e-147	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NIPEDNLJ_01731	3.95e-167	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
NIPEDNLJ_01732	1.87e-218	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
NIPEDNLJ_01733	6.1e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
NIPEDNLJ_01734	2.57e-221	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
NIPEDNLJ_01735	2.54e-130	-	-	-	K	-	-	-	LysR substrate binding domain
NIPEDNLJ_01736	4.05e-70	-	-	-	S	-	-	-	branched-chain amino acid
NIPEDNLJ_01737	9.75e-186	-	-	-	E	-	-	-	AzlC protein
NIPEDNLJ_01738	3.73e-264	hpk31	-	-	T	-	-	-	Histidine kinase
NIPEDNLJ_01739	9.76e-161	vanR	-	-	K	-	-	-	response regulator
NIPEDNLJ_01740	1.47e-265	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
NIPEDNLJ_01741	6.79e-218	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	sugar-binding domain protein
NIPEDNLJ_01742	3.27e-167	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
NIPEDNLJ_01743	5.28e-299	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
NIPEDNLJ_01744	4.64e-298	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
NIPEDNLJ_01745	9.74e-154	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NIPEDNLJ_01746	6.3e-175	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
NIPEDNLJ_01747	1.75e-254	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
NIPEDNLJ_01748	2.37e-42	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
NIPEDNLJ_01749	1.38e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
NIPEDNLJ_01750	8.34e-180	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
NIPEDNLJ_01751	3.79e-193	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
NIPEDNLJ_01752	1.36e-157	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
NIPEDNLJ_01753	6.22e-210	-	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	3-hydroxyacyl-CoA dehydrogenase
NIPEDNLJ_01754	8.26e-219	rihA	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
NIPEDNLJ_01755	2.4e-278	nupG	-	-	F	ko:K03317,ko:K11535,ko:K16323	-	ko00000,ko02000	Nucleoside transporter
NIPEDNLJ_01756	5.9e-284	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
NIPEDNLJ_01757	8.05e-178	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_01758	0.0	glnP	-	-	P	ko:K02029,ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
NIPEDNLJ_01759	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NIPEDNLJ_01760	1.67e-45	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_01761	1.28e-35	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_01762	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_01763	5.64e-225	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
NIPEDNLJ_01764	3.06e-267	-	1.5.1.36	-	S	ko:K19784,ko:K22393,ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	reductase
NIPEDNLJ_01765	2.01e-130	-	1.5.1.36	-	S	ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	reductase
NIPEDNLJ_01766	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NIPEDNLJ_01767	1.16e-223	cytR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Transcriptional regulator, LacI family
NIPEDNLJ_01768	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
NIPEDNLJ_01769	9.89e-264	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
NIPEDNLJ_01770	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
NIPEDNLJ_01771	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
NIPEDNLJ_01772	0.0	malL	3.2.1.10	GH13	G	ko:K01182	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
NIPEDNLJ_01773	0.0	sdrF	-	-	M	ko:K14194	ko05150,map05150	ko00000,ko00001	protein which possibly mediates interactions of S.aureus with components of the extracellular matrix of higher eukaryotes
NIPEDNLJ_01774	0.0	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Poly(Glycerol-phosphate) alpha-glucosyltransferase
NIPEDNLJ_01775	0.0	tagE6	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
NIPEDNLJ_01776	8.53e-95	-	-	-	-	-	-	-	-
NIPEDNLJ_01777	1.76e-40	-	-	-	K	-	-	-	Transcriptional regulator, TetR family
NIPEDNLJ_01778	1.04e-37	-	-	-	K	-	-	-	Transcriptional regulator, TetR family
NIPEDNLJ_01779	2.53e-17	-	-	-	K	-	-	-	Transcriptional regulator, TetR family
NIPEDNLJ_01780	1.11e-16	-	-	-	E	-	-	-	amino acid
NIPEDNLJ_01782	1.82e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NIPEDNLJ_01783	3.46e-114	-	-	-	-	-	-	-	-
NIPEDNLJ_01784	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NIPEDNLJ_01785	3.44e-238	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
NIPEDNLJ_01786	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
NIPEDNLJ_01787	6.51e-114	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
NIPEDNLJ_01788	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
NIPEDNLJ_01789	1.8e-215	-	-	-	C	-	-	-	Aldo keto reductase
NIPEDNLJ_01790	3.7e-176	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
NIPEDNLJ_01791	1.29e-247	gshAB	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
NIPEDNLJ_01792	1.53e-60	gshAB	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
NIPEDNLJ_01793	1.18e-273	-	-	-	P	-	-	-	Voltage gated chloride channel
NIPEDNLJ_01794	7.94e-290	sptS	-	-	T	-	-	-	Histidine kinase
NIPEDNLJ_01795	3.15e-153	dltr	-	-	K	-	-	-	response regulator
NIPEDNLJ_01796	4.14e-111	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
NIPEDNLJ_01797	4.08e-99	-	-	-	-	-	-	-	-
NIPEDNLJ_01798	1.76e-154	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
NIPEDNLJ_01799	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
NIPEDNLJ_01800	0.0	malT	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
NIPEDNLJ_01801	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
NIPEDNLJ_01802	1.81e-272	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
NIPEDNLJ_01803	3e-221	malR1	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
NIPEDNLJ_01804	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
NIPEDNLJ_01805	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
NIPEDNLJ_01806	8.4e-301	-	-	-	L	-	-	-	transposase IS116 IS110 IS902 family protein
NIPEDNLJ_01807	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NIPEDNLJ_01808	1.12e-135	-	-	-	K	-	-	-	PFAM GCN5-related N-acetyltransferase
NIPEDNLJ_01810	2.59e-135	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_01811	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	associated with various cellular activities
NIPEDNLJ_01812	2.49e-43	-	-	-	-	-	-	-	-
NIPEDNLJ_01813	6.55e-272	-	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NIPEDNLJ_01814	1.04e-222	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NIPEDNLJ_01815	1.97e-97	-	-	-	O	-	-	-	OsmC-like protein
NIPEDNLJ_01816	1.47e-110	-	-	-	K	-	-	-	FR47-like protein
NIPEDNLJ_01819	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
NIPEDNLJ_01820	3.63e-31	-	-	-	-	-	-	-	-
NIPEDNLJ_01821	6.83e-06	-	-	-	-	-	-	-	-
NIPEDNLJ_01822	1.6e-30	-	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NIPEDNLJ_01823	1.34e-186	-	-	-	E	-	-	-	Glyoxalase-like domain
NIPEDNLJ_01824	1.53e-288	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	Dehydrogenase
NIPEDNLJ_01825	7.45e-124	-	-	-	S	-	-	-	reductase
NIPEDNLJ_01827	2.63e-115	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NIPEDNLJ_01828	1.49e-225	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
NIPEDNLJ_01829	2.36e-116	pgpA	-	-	I	-	-	-	Phosphatidylglycerophosphatase A
NIPEDNLJ_01830	4.21e-266	-	-	-	L	-	-	-	transposase IS116 IS110 IS902 family protein
NIPEDNLJ_01831	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_01832	5.94e-283	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
NIPEDNLJ_01833	9.84e-194	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
NIPEDNLJ_01834	2.39e-191	yycI	-	-	S	-	-	-	YycH protein
NIPEDNLJ_01835	1.09e-311	yycH	-	-	S	-	-	-	YycH protein
NIPEDNLJ_01836	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
NIPEDNLJ_01837	3.69e-168	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
NIPEDNLJ_01839	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
NIPEDNLJ_01840	6.3e-95	-	-	-	K	ko:K18909	-	ko00000,ko00002,ko01504,ko03000	helix_turn_helix multiple antibiotic resistance protein
NIPEDNLJ_01842	1.62e-76	-	-	-	S	-	-	-	Fic/DOC family
NIPEDNLJ_01843	2.95e-55	-	-	-	S	-	-	-	Fic/DOC family
NIPEDNLJ_01844	9.33e-152	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_01845	8.8e-162	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_01846	3.06e-222	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01847	1.03e-207	-	-	-	S	-	-	-	Polyphosphate nucleotide phosphotransferase, PPK2 family
NIPEDNLJ_01848	7.71e-81	-	-	-	-	-	-	-	-
NIPEDNLJ_01849	7.59e-269	yttB	-	-	EGP	-	-	-	Major Facilitator
NIPEDNLJ_01850	3.65e-308	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
NIPEDNLJ_01851	1.25e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
NIPEDNLJ_01852	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
NIPEDNLJ_01853	5.7e-67	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	sugar-binding domain protein
NIPEDNLJ_01854	1.71e-06	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	sugar-binding domain protein
NIPEDNLJ_01855	2.86e-61	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NIPEDNLJ_01856	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_01857	9.36e-48	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NIPEDNLJ_01858	1.34e-110	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
NIPEDNLJ_01859	4.55e-64	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
NIPEDNLJ_01860	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NIPEDNLJ_01861	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NIPEDNLJ_01862	1.63e-259	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NIPEDNLJ_01863	5.41e-47	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
NIPEDNLJ_01864	5.36e-169	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_01865	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_01866	1.32e-125	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_01867	6.68e-262	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
NIPEDNLJ_01868	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NIPEDNLJ_01869	7.96e-21	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
NIPEDNLJ_01870	1.39e-76	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
NIPEDNLJ_01871	1.21e-171	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NIPEDNLJ_01872	8.52e-168	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
NIPEDNLJ_01873	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
NIPEDNLJ_01874	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
NIPEDNLJ_01875	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
NIPEDNLJ_01876	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NIPEDNLJ_01877	7.07e-313	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
NIPEDNLJ_01878	3.47e-147	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
NIPEDNLJ_01879	1.58e-19	-	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase, GNAT family
NIPEDNLJ_01880	1.02e-220	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01881	3.09e-136	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
NIPEDNLJ_01882	1.52e-239	-	-	-	S	-	-	-	amidohydrolase
NIPEDNLJ_01883	0.0	-	-	-	K	-	-	-	Aminotransferase class I and II
NIPEDNLJ_01884	1.69e-144	azlC	-	-	E	-	-	-	azaleucine resistance protein AzlC
NIPEDNLJ_01885	8.58e-134	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_01886	1.58e-66	azlD	-	-	E	-	-	-	Branched-chain amino acid transport
NIPEDNLJ_01887	2.57e-141	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
NIPEDNLJ_01888	1.03e-148	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
NIPEDNLJ_01889	3.02e-134	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
NIPEDNLJ_01890	8.7e-123	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
NIPEDNLJ_01891	1.66e-246	flp	-	-	V	-	-	-	Beta-lactamase
NIPEDNLJ_01892	5.52e-158	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01893	1.76e-24	-	-	-	H	-	-	-	RibD C-terminal domain
NIPEDNLJ_01894	3.28e-140	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
NIPEDNLJ_01895	1.9e-270	-	-	-	T	-	-	-	GHKL domain
NIPEDNLJ_01896	1.55e-97	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
NIPEDNLJ_01897	1.02e-82	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
NIPEDNLJ_01898	1.12e-50	-	-	-	S	-	-	-	Alpha beta hydrolase
NIPEDNLJ_01899	1.82e-111	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_01900	4.6e-83	-	-	-	S	-	-	-	Alpha beta hydrolase
NIPEDNLJ_01901	6.93e-195	mhpD	-	-	Q	ko:K02509	ko00350,ko01120,map00350,map01120	ko00000,ko00001,ko01000	hydratase
NIPEDNLJ_01902	1.65e-219	hdhL	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
NIPEDNLJ_01903	3.55e-215	ypuA	-	-	S	-	-	-	Protein of unknown function (DUF1002)
NIPEDNLJ_01904	1.99e-235	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
NIPEDNLJ_01905	5.95e-238	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01906	1.03e-138	-	-	-	K	-	-	-	Transcriptional regulator
NIPEDNLJ_01907	6.67e-204	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
NIPEDNLJ_01908	4.71e-128	qorB	1.6.5.2	-	GM	ko:K19267	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NmrA-like family
NIPEDNLJ_01909	3.65e-78	-	-	-	-	-	-	-	-
NIPEDNLJ_01910	4.69e-165	-	-	-	F	-	-	-	glutamine amidotransferase
NIPEDNLJ_01911	2.25e-47	-	-	-	T	-	-	-	EAL domain
NIPEDNLJ_01912	1.22e-133	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_01913	4.69e-147	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01914	2.98e-33	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01915	1.11e-105	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
NIPEDNLJ_01916	3.81e-197	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
NIPEDNLJ_01917	3.51e-253	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
NIPEDNLJ_01918	1.69e-54	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
NIPEDNLJ_01919	3.08e-62	ywnA	-	-	K	-	-	-	Transcriptional regulator
NIPEDNLJ_01920	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
NIPEDNLJ_01921	6.88e-144	-	-	-	GM	-	-	-	NAD dependent epimerase dehydratase family protein
NIPEDNLJ_01922	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
NIPEDNLJ_01923	2.65e-269	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
NIPEDNLJ_01924	6.13e-296	-	-	-	-	-	-	-	-
NIPEDNLJ_01925	7.27e-106	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
NIPEDNLJ_01926	6.45e-138	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
NIPEDNLJ_01927	1.07e-66	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
NIPEDNLJ_01928	1.11e-156	-	-	-	GM	-	-	-	NmrA-like family
NIPEDNLJ_01929	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
NIPEDNLJ_01930	2.03e-96	-	-	-	S	ko:K02348	-	ko00000	Gnat family
NIPEDNLJ_01931	3.33e-39	-	-	-	S	-	-	-	Cytochrome B5
NIPEDNLJ_01932	2.4e-279	-	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
NIPEDNLJ_01934	3.37e-09	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NIPEDNLJ_01935	2.12e-150	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NIPEDNLJ_01936	4.67e-313	-	-	-	E	ko:K03294	-	ko00000	amino acid
NIPEDNLJ_01937	1.15e-73	npp	-	-	S	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
NIPEDNLJ_01938	9.51e-127	npp	-	-	S	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
NIPEDNLJ_01939	3.27e-277	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
NIPEDNLJ_01941	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NIPEDNLJ_01942	8.96e-64	-	-	-	-	-	-	-	-
NIPEDNLJ_01943	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
NIPEDNLJ_01944	7.01e-244	-	-	-	E	-	-	-	Zinc-binding dehydrogenase
NIPEDNLJ_01945	2.52e-111	-	-	-	K	-	-	-	transcriptional regulator (TetR family)
NIPEDNLJ_01946	9.09e-223	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
NIPEDNLJ_01947	2.77e-151	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_01948	1.77e-221	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01949	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_01950	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_01951	1.61e-48	-	-	-	-	-	-	-	-
NIPEDNLJ_01952	3.19e-43	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
NIPEDNLJ_01953	0.0	-	3.2.1.17	CBM50	NU	ko:K01185,ko:K02395,ko:K19223	-	ko00000,ko01000,ko01002,ko01011,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NIPEDNLJ_01954	3.78e-221	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
NIPEDNLJ_01955	5.24e-33	-	-	-	-	-	-	-	-
NIPEDNLJ_01956	1.03e-146	-	-	-	-	-	-	-	-
NIPEDNLJ_01957	3.01e-274	yttB	-	-	EGP	-	-	-	Major Facilitator
NIPEDNLJ_01958	1.96e-311	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
NIPEDNLJ_01959	1.41e-88	-	-	-	-	-	-	-	-
NIPEDNLJ_01960	4.13e-140	nnrE	5.1.99.6	-	H	ko:K17759	-	ko00000,ko01000	Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
NIPEDNLJ_01961	5.22e-191	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01962	1.06e-68	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NIPEDNLJ_01964	1.76e-274	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
NIPEDNLJ_01965	0.0	-	2.4.1.5	GH13	G	ko:K00689	ko00500,ko02020,map00500,map02020	ko00000,ko00001,ko01000	Glycosyl hydrolase family 70
NIPEDNLJ_01966	1.84e-10	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	Ami_3
NIPEDNLJ_01967	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
NIPEDNLJ_01968	4.02e-159	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
NIPEDNLJ_01970	1.46e-126	-	-	-	-	-	-	-	-
NIPEDNLJ_01971	5.95e-238	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_01972	1.89e-275	dacA	3.4.16.4	-	M	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
NIPEDNLJ_01973	7.91e-189	-	-	-	S	-	-	-	Alpha beta hydrolase
NIPEDNLJ_01974	2.34e-263	gldA	1.1.1.6	-	C	ko:K00005	ko00561,ko00640,ko01100,map00561,map00640,map01100	ko00000,ko00001,ko01000	dehydrogenase
NIPEDNLJ_01975	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
NIPEDNLJ_01976	1.15e-52	-	-	-	-	-	-	-	-
NIPEDNLJ_01977	9.5e-162	pgm3	-	-	G	-	-	-	phosphoglycerate mutase family
NIPEDNLJ_01978	6.16e-78	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
NIPEDNLJ_01979	2.91e-255	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
NIPEDNLJ_01980	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
NIPEDNLJ_01981	3.93e-306	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
NIPEDNLJ_01982	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
NIPEDNLJ_01983	3.34e-215	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
NIPEDNLJ_01984	6.25e-216	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
NIPEDNLJ_01985	1.08e-168	yceF	-	-	P	ko:K05794	-	ko00000	membrane
NIPEDNLJ_01986	6.46e-74	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
NIPEDNLJ_01987	8.45e-300	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
NIPEDNLJ_01988	4.63e-74	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
NIPEDNLJ_01989	6.27e-125	-	-	-	P	-	-	-	Cadmium resistance transporter
NIPEDNLJ_01990	5.63e-177	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_01991	1.18e-196	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
NIPEDNLJ_01992	1.83e-232	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
NIPEDNLJ_01993	1.46e-156	-	-	-	M	-	-	-	PFAM NLP P60 protein
NIPEDNLJ_01994	2.96e-125	-	-	-	S	-	-	-	Protein of unknown function (DUF3278)
NIPEDNLJ_01995	5.78e-39	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
NIPEDNLJ_01996	2.18e-66	-	-	-	L	-	-	-	Integrase
NIPEDNLJ_01997	2.7e-18	XK27_09155	-	-	K	-	-	-	Transcriptional
NIPEDNLJ_01998	4.82e-131	cadD	-	-	P	-	-	-	Cadmium resistance transporter
NIPEDNLJ_01999	2.94e-73	cadX	-	-	K	ko:K21903	-	ko00000,ko03000	Bacterial regulatory protein, arsR family
NIPEDNLJ_02000	1.31e-93	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NIPEDNLJ_02001	1e-127	arsB	-	-	P	ko:K03325	-	ko00000,ko02000	Sodium Bile acid symporter family
NIPEDNLJ_02002	1.82e-111	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_02003	3.15e-95	arsB	-	-	P	ko:K03325	-	ko00000,ko02000	Sodium Bile acid symporter family
NIPEDNLJ_02004	1.12e-46	arsR	-	-	K	ko:K03892	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
NIPEDNLJ_02006	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
NIPEDNLJ_02007	3.27e-183	-	-	-	S	-	-	-	Putative ABC-transporter type IV
NIPEDNLJ_02008	2.85e-135	-	-	-	NU	-	-	-	mannosyl-glycoprotein
NIPEDNLJ_02009	5.41e-316	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
NIPEDNLJ_02010	2.88e-290	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
NIPEDNLJ_02011	4.53e-263	yngD	-	-	S	ko:K07097	-	ko00000	DHHA1 domain
NIPEDNLJ_02012	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_02013	1.68e-64	-	-	-	-	-	-	-	-
NIPEDNLJ_02014	4.78e-39	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
NIPEDNLJ_02016	9.17e-70	-	-	-	-	-	-	-	-
NIPEDNLJ_02017	1.43e-152	yrkL	-	-	S	-	-	-	Flavodoxin-like fold
NIPEDNLJ_02019	2.01e-84	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
NIPEDNLJ_02020	8.15e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
NIPEDNLJ_02021	1.2e-260	-	-	-	S	-	-	-	associated with various cellular activities
NIPEDNLJ_02022	8.96e-292	-	-	-	S	-	-	-	Putative metallopeptidase domain
NIPEDNLJ_02023	2.02e-62	-	-	-	-	-	-	-	-
NIPEDNLJ_02024	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
NIPEDNLJ_02025	9.15e-129	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
NIPEDNLJ_02026	2.45e-112	ymdB	-	-	S	-	-	-	Macro domain protein
NIPEDNLJ_02027	7.15e-244	-	-	-	EGP	-	-	-	Major Facilitator
NIPEDNLJ_02028	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NIPEDNLJ_02029	2.98e-69	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
NIPEDNLJ_02030	3.08e-212	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
NIPEDNLJ_02031	3.87e-199	metA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
NIPEDNLJ_02032	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
NIPEDNLJ_02033	9.68e-172	XK27_05695	-	-	V	ko:K02003,ko:K19083	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_02034	1.29e-234	kinG	-	-	T	-	-	-	Histidine kinase-like ATPases
NIPEDNLJ_02035	1.34e-172	XK27_10500	-	-	K	-	-	-	response regulator
NIPEDNLJ_02036	1.46e-201	yvgN	-	-	S	-	-	-	Aldo keto reductase
NIPEDNLJ_02037	3.4e-176	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
NIPEDNLJ_02038	4.74e-107	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NIPEDNLJ_02039	6.14e-259	-	-	-	-	-	-	-	-
NIPEDNLJ_02040	2.06e-67	-	-	-	-	-	-	-	-
NIPEDNLJ_02041	1.21e-48	-	-	-	-	-	-	-	-
NIPEDNLJ_02042	9.21e-120	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
NIPEDNLJ_02043	9.06e-186	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
NIPEDNLJ_02044	7.7e-227	celE3	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
NIPEDNLJ_02045	2.97e-287	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NIPEDNLJ_02046	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
NIPEDNLJ_02047	1.69e-232	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
NIPEDNLJ_02048	3.95e-137	apl	3.1.3.1	-	S	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	SNARE associated Golgi protein
NIPEDNLJ_02049	5.61e-292	gltT	-	-	U	ko:K03309,ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
NIPEDNLJ_02050	1.28e-102	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	AsnC family
NIPEDNLJ_02051	2.71e-103	usp5	-	-	T	-	-	-	universal stress protein
NIPEDNLJ_02052	6.36e-63	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
NIPEDNLJ_02053	5.08e-77	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
NIPEDNLJ_02054	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
NIPEDNLJ_02055	2.6e-54	-	-	-	-	-	-	-	-
NIPEDNLJ_02056	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NIPEDNLJ_02057	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NIPEDNLJ_02058	7.93e-242	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
NIPEDNLJ_02059	4.3e-96	-	-	-	S	ko:K04750	-	ko00000	3-demethylubiquinone-9 3-methyltransferase
NIPEDNLJ_02060	1.57e-107	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
NIPEDNLJ_02061	1.53e-303	yhdP	-	-	S	-	-	-	Transporter associated domain
NIPEDNLJ_02062	8.05e-198	-	-	-	V	-	-	-	(ABC) transporter
NIPEDNLJ_02063	9.43e-116	-	-	-	GM	-	-	-	epimerase
NIPEDNLJ_02064	5.04e-116	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
NIPEDNLJ_02065	8.16e-103	yybA	-	-	K	-	-	-	Transcriptional regulator
NIPEDNLJ_02066	3.53e-169	XK27_07210	-	-	S	-	-	-	B3 4 domain
NIPEDNLJ_02067	4.09e-235	XK27_12525	-	-	S	-	-	-	AI-2E family transporter
NIPEDNLJ_02068	8.07e-199	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
NIPEDNLJ_02069	2.74e-202	-	-	-	-	-	-	-	-
NIPEDNLJ_02070	4.17e-174	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
NIPEDNLJ_02071	7.77e-238	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NIPEDNLJ_02072	1.36e-104	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
NIPEDNLJ_02073	6.43e-103	-	-	-	L	ko:K07482	-	ko00000	transposase and inactivated derivatives, IS30 family
NIPEDNLJ_02074	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_02075	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
NIPEDNLJ_02076	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
NIPEDNLJ_02077	5.75e-114	ebsC	-	-	J	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NIPEDNLJ_02078	3.02e-171	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
NIPEDNLJ_02079	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
NIPEDNLJ_02080	2.32e-298	-	-	-	E	-	-	-	amino acid
NIPEDNLJ_02081	1.01e-150	yfhR3	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
NIPEDNLJ_02082	5.39e-68	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
NIPEDNLJ_02083	7.01e-223	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
NIPEDNLJ_02084	8.14e-209	-	-	-	GK	-	-	-	ROK family
NIPEDNLJ_02085	0.0	fusA1	-	-	J	-	-	-	elongation factor G
NIPEDNLJ_02086	7.46e-106	uspA3	-	-	T	-	-	-	universal stress protein
NIPEDNLJ_02087	1e-248	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
NIPEDNLJ_02088	1.78e-83	-	-	-	-	-	-	-	-
NIPEDNLJ_02089	2.31e-11	-	-	-	-	-	-	-	-
NIPEDNLJ_02090	2.61e-148	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
NIPEDNLJ_02091	1.12e-175	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
NIPEDNLJ_02092	1.13e-269	-	-	-	EGP	-	-	-	Major Facilitator
NIPEDNLJ_02093	0.0	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system Galactitol-specific IIC component
NIPEDNLJ_02094	9.11e-30	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
NIPEDNLJ_02095	1.48e-110	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
NIPEDNLJ_02096	1.51e-201	-	-	-	-	-	-	-	-
NIPEDNLJ_02097	1.3e-95	-	-	-	K	-	-	-	Transcriptional regulator
NIPEDNLJ_02098	4.14e-231	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
NIPEDNLJ_02099	2.59e-68	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
NIPEDNLJ_02100	0.0	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
NIPEDNLJ_02101	6.5e-71	-	-	-	-	-	-	-	-
NIPEDNLJ_02102	4.63e-144	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
NIPEDNLJ_02103	7.23e-316	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NIPEDNLJ_02104	3e-127	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
NIPEDNLJ_02105	1.47e-171	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
NIPEDNLJ_02106	8.21e-74	-	-	-	IQ	-	-	-	KR domain
NIPEDNLJ_02107	1.45e-43	-	-	-	IQ	-	-	-	KR domain
NIPEDNLJ_02108	5.68e-12	-	-	-	IQ	-	-	-	KR domain
NIPEDNLJ_02109	5.74e-79	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_02110	1.8e-292	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_02111	5.46e-233	iunH1	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
NIPEDNLJ_02112	2.93e-234	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
NIPEDNLJ_02113	1.91e-43	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
NIPEDNLJ_02114	6.92e-70	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
NIPEDNLJ_02115	5.17e-24	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
NIPEDNLJ_02116	2.14e-148	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
NIPEDNLJ_02117	2.33e-224	yagE	-	-	E	-	-	-	amino acid
NIPEDNLJ_02118	3.32e-27	yagE	-	-	E	-	-	-	amino acid
NIPEDNLJ_02119	4.16e-112	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
NIPEDNLJ_02120	0.0	atp2C1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
NIPEDNLJ_02121	7.11e-225	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
NIPEDNLJ_02122	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
NIPEDNLJ_02123	1.41e-79	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NIPEDNLJ_02124	8.45e-176	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_02125	3.24e-93	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_02126	1.25e-262	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
NIPEDNLJ_02127	4.13e-186	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NIPEDNLJ_02128	7.65e-184	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NIPEDNLJ_02129	1.71e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
NIPEDNLJ_02130	1.72e-16	-	-	-	-	-	-	-	-
NIPEDNLJ_02131	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NIPEDNLJ_02132	1.71e-100	-	-	-	-	-	-	-	-
NIPEDNLJ_02133	1.94e-52	-	-	-	-	-	-	-	-
NIPEDNLJ_02134	4.31e-180	-	-	-	L	-	-	-	Bacterial dnaA protein
NIPEDNLJ_02135	1.61e-292	-	-	-	L	-	-	-	Integrase core domain
NIPEDNLJ_02136	2.25e-141	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_02137	0.0	-	-	-	L	-	-	-	Transposase
NIPEDNLJ_02138	8.55e-291	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NIPEDNLJ_02139	2.93e-297	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
NIPEDNLJ_02140	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
NIPEDNLJ_02141	3.08e-155	-	-	-	-	-	-	-	-
NIPEDNLJ_02142	1.44e-123	-	-	-	-	-	-	-	-
NIPEDNLJ_02143	3.67e-198	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
NIPEDNLJ_02144	3.08e-56	-	-	-	-	-	-	-	-
NIPEDNLJ_02145	5.66e-11	-	-	-	D	-	-	-	GA module
NIPEDNLJ_02147	3.04e-171	ermA	2.1.1.184	-	J	ko:K00561	-	br01600,ko00000,ko01000,ko01504,ko03009	Ribosomal RNA adenine dimethylase
NIPEDNLJ_02148	8.7e-64	-	-	-	L	-	-	-	Integrase
NIPEDNLJ_02149	1.81e-43	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
NIPEDNLJ_02150	1.22e-49	-	-	-	K	-	-	-	Helix-turn-helix domain
NIPEDNLJ_02151	8.22e-121	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NIPEDNLJ_02152	9.83e-148	-	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
NIPEDNLJ_02153	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
NIPEDNLJ_02154	8.21e-216	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
NIPEDNLJ_02156	4.22e-164	-	-	-	L	-	-	-	PFAM Integrase catalytic region
NIPEDNLJ_02157	2.1e-248	ald1	1.4.1.1	-	C	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
NIPEDNLJ_02158	4.63e-29	-	-	-	S	-	-	-	to AA sequence GI 189502478
NIPEDNLJ_02159	1.07e-29	-	-	-	L	-	-	-	PFAM Transposase DDE domain
NIPEDNLJ_02160	3.29e-206	ilvA	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NIPEDNLJ_02161	2.97e-29	-	-	-	L	ko:K07482	-	ko00000	Helix-turn-helix domain
NIPEDNLJ_02162	6.31e-82	-	-	-	L	ko:K07482	-	ko00000	Helix-turn-helix domain
NIPEDNLJ_02163	3.12e-202	panE1	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NIPEDNLJ_02164	3.44e-78	-	-	-	L	-	-	-	Resolvase, N terminal domain
NIPEDNLJ_02165	2.61e-44	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
NIPEDNLJ_02166	1.12e-33	-	-	-	K	-	-	-	Helix-turn-helix domain
NIPEDNLJ_02167	3.31e-60	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
NIPEDNLJ_02168	3.19e-99	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
NIPEDNLJ_02169	3.7e-201	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
NIPEDNLJ_02170	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
NIPEDNLJ_02171	3.7e-201	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
NIPEDNLJ_02172	7.39e-98	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Transcriptional regulator
NIPEDNLJ_02173	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5	-	P	ko:K01533,ko:K01534	-	ko00000,ko01000	P-type ATPase
NIPEDNLJ_02175	1.41e-67	-	-	-	-	-	-	-	-
NIPEDNLJ_02176	0.0	sthIR	3.1.21.5	-	L	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
NIPEDNLJ_02177	5.36e-302	-	2.1.1.72	-	L	ko:K00571,ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
NIPEDNLJ_02178	3.89e-05	-	-	-	L	-	-	-	Resolvase, N terminal domain
NIPEDNLJ_02180	3.37e-100	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
NIPEDNLJ_02182	1.07e-29	-	-	-	L	-	-	-	PFAM Transposase DDE domain
NIPEDNLJ_02183	4.63e-29	-	-	-	S	-	-	-	to AA sequence GI 189502478
NIPEDNLJ_02184	2.83e-19	-	-	-	-	-	-	-	-
NIPEDNLJ_02185	1.47e-295	-	-	-	-	-	-	-	-
NIPEDNLJ_02186	3.67e-198	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
NIPEDNLJ_02187	3.08e-56	-	-	-	-	-	-	-	-
NIPEDNLJ_02188	5.66e-11	-	-	-	D	-	-	-	GA module
NIPEDNLJ_02190	3.04e-171	ermA	2.1.1.184	-	J	ko:K00561	-	br01600,ko00000,ko01000,ko01504,ko03009	Ribosomal RNA adenine dimethylase
NIPEDNLJ_02191	3.3e-124	-	-	-	L	-	-	-	Integrase
NIPEDNLJ_02192	2.2e-70	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
NIPEDNLJ_02193	1.22e-49	-	-	-	K	-	-	-	Helix-turn-helix domain
NIPEDNLJ_02194	8.22e-121	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NIPEDNLJ_02195	9.83e-148	-	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
NIPEDNLJ_02196	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
NIPEDNLJ_02197	8.21e-216	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter