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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
COJIECFE_00001	0.0	-	3.2.1.96	-	G	ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 85
COJIECFE_00002	1.8e-55	-	3.2.1.96	-	G	ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 85
COJIECFE_00003	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
COJIECFE_00004	2.44e-267	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
COJIECFE_00005	0.0	malS	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Glycogen debranching enzyme, glucanotransferase domain
COJIECFE_00006	2.91e-190	malA	-	-	S	-	-	-	maltodextrose utilization protein MalA
COJIECFE_00007	2.83e-206	malD	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
COJIECFE_00008	3.74e-302	malC	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
COJIECFE_00009	9.45e-299	mdxE	-	-	G	ko:K02027,ko:K15770,ko:K17237	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
COJIECFE_00010	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
COJIECFE_00011	1.83e-231	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
COJIECFE_00012	6.24e-244	malR1	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
COJIECFE_00013	4e-172	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
COJIECFE_00014	6.76e-75	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
COJIECFE_00015	2.75e-131	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
COJIECFE_00016	1.58e-238	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
COJIECFE_00017	1.36e-242	dhaK2	2.7.1.28, 2.7.1.29, 4.6.1.15	-	G	ko:K00863	ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622	ko00000,ko00001,ko00002,ko01000	Dak1 domain
COJIECFE_00018	1.85e-121	XK27_02085	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_00019	2.04e-99	-	-	-	T	-	-	-	ECF transporter, substrate-specific component
COJIECFE_00020	0.0	etfA	1.3.1.108	-	C	ko:K03522,ko:K22432	-	ko00000,ko01000,ko04147	Electron transfer flavoprotein FAD-binding domain
COJIECFE_00021	8.03e-151	-	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
COJIECFE_00022	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
COJIECFE_00023	6.03e-218	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
COJIECFE_00024	1.01e-184	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
COJIECFE_00025	3.37e-115	-	-	-	-	-	-	-	-
COJIECFE_00026	1.57e-191	-	-	-	-	-	-	-	-
COJIECFE_00027	6.08e-180	-	-	-	-	-	-	-	-
COJIECFE_00028	4.14e-72	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
COJIECFE_00029	4.37e-167	-	-	-	K	ko:K03492	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
COJIECFE_00031	2.57e-128	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
COJIECFE_00032	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
COJIECFE_00033	3.28e-193	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
COJIECFE_00034	6.49e-268	-	-	-	C	-	-	-	Oxidoreductase
COJIECFE_00035	0.0	-	-	-	-	-	-	-	-
COJIECFE_00036	4.29e-102	-	-	-	-	-	-	-	-
COJIECFE_00037	0.0	l1n	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
COJIECFE_00038	1.92e-106	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase like
COJIECFE_00039	8.21e-213	-	1.1.1.65	-	C	ko:K05275	ko00750,ko01100,ko01120,map00750,map01100,map01120	ko00000,ko00001,ko01000	Aldo keto reductase
COJIECFE_00040	2.16e-204	morA	-	-	S	-	-	-	reductase
COJIECFE_00042	4.06e-214	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
COJIECFE_00043	3.98e-68	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
COJIECFE_00044	5.38e-290	-	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
COJIECFE_00045	5.51e-106	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
COJIECFE_00046	3.99e-96	hsp1	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
COJIECFE_00047	1.27e-98	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_00048	1.72e-142	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
COJIECFE_00049	2.92e-38	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
COJIECFE_00050	1.34e-183	-	-	-	F	-	-	-	Phosphorylase superfamily
COJIECFE_00051	0.0	pacL1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
COJIECFE_00052	8.14e-126	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
COJIECFE_00053	2.81e-64	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
COJIECFE_00054	1.23e-199	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
COJIECFE_00055	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
COJIECFE_00056	5.24e-181	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
COJIECFE_00057	5.08e-192	-	-	-	I	-	-	-	Alpha/beta hydrolase family
COJIECFE_00058	1.27e-159	-	-	-	-	-	-	-	-
COJIECFE_00059	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
COJIECFE_00060	5.04e-109	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
COJIECFE_00061	0.0	-	-	-	L	-	-	-	HIRAN domain
COJIECFE_00062	4.83e-174	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
COJIECFE_00063	4.15e-261	thiP	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
COJIECFE_00064	1.48e-140	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COJIECFE_00065	1.18e-188	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
COJIECFE_00066	6.51e-176	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
COJIECFE_00067	7.11e-227	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
COJIECFE_00068	5.24e-193	larE	-	-	S	ko:K06864	-	ko00000	NAD synthase
COJIECFE_00069	1.19e-170	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
COJIECFE_00070	6.32e-99	larC2	4.99.1.12	-	S	ko:K09121	-	ko00000,ko01000	Protein of unknown function DUF111
COJIECFE_00071	2.03e-179	larC	4.99.1.12	-	S	ko:K09121	-	ko00000,ko01000	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
COJIECFE_00072	2.65e-162	larB	-	-	S	ko:K06898	-	ko00000	AIR carboxylase
COJIECFE_00073	7.9e-306	larA	5.1.2.1	-	S	ko:K22373	ko00620,map00620	ko00000,ko00001,ko01000	Domain of unknown function (DUF2088)
COJIECFE_00074	1.39e-156	rcfB	-	-	K	-	-	-	Crp-like helix-turn-helix domain
COJIECFE_00075	1.84e-235	cbiM	-	-	P	ko:K02007	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PDGLE domain
COJIECFE_00076	9.79e-192	-	-	-	P	ko:K02008	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
COJIECFE_00077	4.29e-166	-	-	-	P	ko:K02006	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
COJIECFE_00078	1.67e-54	-	-	-	-	-	-	-	-
COJIECFE_00079	1.1e-181	ant1	2.7.7.47	-	H	ko:K00984	-	ko00000,ko01000,ko01504	Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
COJIECFE_00081	5.67e-179	-	-	-	-	-	-	-	-
COJIECFE_00082	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
COJIECFE_00083	2.38e-99	-	-	-	-	-	-	-	-
COJIECFE_00084	7.76e-181	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
COJIECFE_00085	5.61e-173	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
COJIECFE_00086	5.98e-302	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
COJIECFE_00087	1.02e-63	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
COJIECFE_00088	3.14e-230	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	nadph quinone reductase
COJIECFE_00089	1.4e-162	-	-	-	S	-	-	-	DJ-1/PfpI family
COJIECFE_00090	7.65e-121	yfbM	-	-	K	-	-	-	FR47-like protein
COJIECFE_00091	7.1e-194	-	-	-	EG	-	-	-	EamA-like transporter family
COJIECFE_00092	2.84e-81	-	-	-	S	-	-	-	Protein of unknown function
COJIECFE_00093	7.44e-51	-	-	-	S	-	-	-	Protein of unknown function
COJIECFE_00094	0.0	fusA1	-	-	J	-	-	-	elongation factor G
COJIECFE_00095	1.63e-152	azoR	-	-	C	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
COJIECFE_00096	1.67e-220	-	-	-	K	-	-	-	WYL domain
COJIECFE_00097	4.35e-165	-	-	-	F	-	-	-	glutamine amidotransferase
COJIECFE_00098	5.54e-105	-	-	-	S	-	-	-	ASCH
COJIECFE_00099	0.0	hpaH	1.14.14.8, 1.14.14.9	-	Q	ko:K00483,ko:K16901	ko00350,ko00380,ko01120,ko01220,map00350,map00380,map01120,map01220	ko00000,ko00001,ko01000	4-hydroxyphenylacetate
COJIECFE_00100	6.86e-175	ptp1	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
COJIECFE_00101	4.65e-316	-	-	-	S	-	-	-	Putative threonine/serine exporter
COJIECFE_00102	2.33e-242	pva1	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
COJIECFE_00103	1.56e-154	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
COJIECFE_00104	0.0	-	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
COJIECFE_00105	5.07e-157	ydgI	-	-	C	-	-	-	Nitroreductase family
COJIECFE_00106	1.35e-202	adc	4.1.1.4	-	Q	ko:K01574	ko00072,ko00640,ko01100,map00072,map00640,map01100	ko00000,ko00001,ko00002,ko01000	Acetoacetate decarboxylase (ADC)
COJIECFE_00107	4.06e-211	-	-	-	S	-	-	-	KR domain
COJIECFE_00108	4.48e-98	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
COJIECFE_00109	2.49e-95	-	-	-	C	-	-	-	FMN binding
COJIECFE_00110	8.42e-204	-	-	-	K	-	-	-	LysR family
COJIECFE_00111	0.0	-	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
COJIECFE_00112	0.0	-	-	-	C	-	-	-	FMN_bind
COJIECFE_00113	1.57e-150	-	-	-	S	-	-	-	Elongation factor G-binding protein, N-terminal
COJIECFE_00114	4.95e-86	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
COJIECFE_00115	1.34e-153	pnb	-	-	C	-	-	-	nitroreductase
COJIECFE_00116	5.97e-157	ung2	-	-	L	-	-	-	Uracil-DNA glycosylase
COJIECFE_00117	8.48e-215	-	-	-	L	-	-	-	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
COJIECFE_00118	0.0	-	-	-	C	-	-	-	Belongs to the aldehyde dehydrogenase family
COJIECFE_00119	3.46e-124	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_00120	7.1e-106	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
COJIECFE_00121	6.1e-253	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
COJIECFE_00122	1.71e-200	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
COJIECFE_00123	3.54e-195	yycI	-	-	S	-	-	-	YycH protein
COJIECFE_00124	3.55e-313	yycH	-	-	S	-	-	-	YycH protein
COJIECFE_00125	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
COJIECFE_00126	2.22e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
COJIECFE_00128	2.54e-50	-	-	-	-	-	-	-	-
COJIECFE_00129	4.37e-43	cspL	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein domain
COJIECFE_00130	3.21e-104	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
COJIECFE_00131	0.0	trePP	2.4.1.216, 2.4.1.8	GH65	G	ko:K00691,ko:K03731	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65 central catalytic domain
COJIECFE_00132	1.1e-154	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
COJIECFE_00133	8.04e-182	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
COJIECFE_00135	0.0	malZ	3.2.1.20, 3.2.1.41	CBM48,GH13,GH31	G	ko:K01187,ko:K01200	ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
COJIECFE_00136	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
COJIECFE_00137	0.0	glgA	2.4.1.21	GT5	F	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Synthesizes alpha-1,4-glucan chains using ADP-glucose
COJIECFE_00138	3.49e-269	glgD	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
COJIECFE_00139	7.65e-272	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
COJIECFE_00140	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
COJIECFE_00141	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
COJIECFE_00143	1.88e-291	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
COJIECFE_00144	9e-184	proB	2.7.2.11	-	F	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
COJIECFE_00145	4.96e-289	yttB	-	-	EGP	-	-	-	Major Facilitator
COJIECFE_00146	8.77e-317	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
COJIECFE_00147	4.02e-94	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
COJIECFE_00148	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
COJIECFE_00149	2.69e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
COJIECFE_00150	1.59e-95	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
COJIECFE_00151	5.95e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
COJIECFE_00152	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
COJIECFE_00153	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
COJIECFE_00154	7.24e-263	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
COJIECFE_00155	3.82e-51	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
COJIECFE_00156	6.73e-266	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
COJIECFE_00157	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
COJIECFE_00158	3.74e-75	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
COJIECFE_00159	1.55e-158	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
COJIECFE_00160	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
COJIECFE_00161	4.56e-306	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
COJIECFE_00162	2.37e-173	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
COJIECFE_00163	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
COJIECFE_00164	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COJIECFE_00165	1.31e-143	-	-	-	S	-	-	-	Cell surface protein
COJIECFE_00166	2.23e-211	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF916)
COJIECFE_00168	0.0	-	-	-	-	-	-	-	-
COJIECFE_00169	2.76e-141	sip3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
COJIECFE_00171	4.63e-215	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
COJIECFE_00172	1.21e-78	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
COJIECFE_00173	1.67e-79	-	-	-	K	-	-	-	Bacteriophage CI repressor helix-turn-helix domain
COJIECFE_00174	4.02e-203	degV1	-	-	S	-	-	-	DegV family
COJIECFE_00175	3.66e-113	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
COJIECFE_00176	8.69e-187	mhpD	-	-	Q	ko:K02509	ko00350,ko01120,map00350,map01120	ko00000,ko00001,ko01000	hydratase
COJIECFE_00179	1.78e-168	-	-	-	LM	-	-	-	DNA recombination
COJIECFE_00180	1.89e-23	-	-	-	S	-	-	-	Protein of unknown function (DUF1617)
COJIECFE_00182	1.24e-54	-	-	-	-	-	-	-	-
COJIECFE_00183	5.04e-07	-	-	-	S	-	-	-	Bacteriophage A118-like holin, Hol118
COJIECFE_00184	4.18e-137	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
COJIECFE_00186	4.29e-87	-	-	-	-	-	-	-	-
COJIECFE_00187	9.03e-16	-	-	-	-	-	-	-	-
COJIECFE_00188	3.89e-237	-	-	-	-	-	-	-	-
COJIECFE_00189	4.91e-117	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
COJIECFE_00190	8.01e-77	-	-	-	S	-	-	-	Protein of unknown function (DUF1516)
COJIECFE_00191	0.0	yitJ	1.5.1.20, 2.1.1.10	-	E	ko:K00297,ko:K00547	ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
COJIECFE_00192	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
COJIECFE_00193	0.0	-	-	-	S	-	-	-	Protein conserved in bacteria
COJIECFE_00194	7.32e-292	sat	2.7.7.4	-	H	ko:K00958	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
COJIECFE_00195	1.33e-128	cysC	2.7.1.25	-	F	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of activated sulfate
COJIECFE_00196	3.1e-41	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain
COJIECFE_00197	1.08e-125	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain
COJIECFE_00198	0.0	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
COJIECFE_00199	0.0	-	-	-	P	-	-	-	Sodium:sulfate symporter transmembrane region
COJIECFE_00200	2.69e-316	dinF	-	-	V	-	-	-	MatE
COJIECFE_00201	1.79e-42	-	-	-	-	-	-	-	-
COJIECFE_00204	8.2e-102	yybD	-	-	S	ko:K02348	-	ko00000	Acetyltransferase (GNAT) domain
COJIECFE_00205	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
COJIECFE_00206	4.64e-106	-	-	-	-	-	-	-	-
COJIECFE_00207	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
COJIECFE_00208	1.04e-136	-	-	-	-	-	-	-	-
COJIECFE_00209	0.0	celR	-	-	K	-	-	-	PRD domain
COJIECFE_00210	1.34e-104	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
COJIECFE_00211	2.37e-68	lacF	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
COJIECFE_00212	4.9e-64	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
COJIECFE_00213	4.16e-285	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_00214	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
COJIECFE_00215	7.06e-271	-	-	-	EGP	ko:K08218	ko01501,map01501	ko00000,ko00001,ko00002,ko02000	Major facilitator Superfamily
COJIECFE_00216	1.72e-148	yciB	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
COJIECFE_00217	1.65e-46	dltC2	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
COJIECFE_00218	0.0	ydfD	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	Alanine-glyoxylate amino-transferase
COJIECFE_00219	8.08e-133	argO	-	-	S	ko:K06895	-	ko00000,ko02000	LysE type translocator
COJIECFE_00220	9.26e-270	arcT	-	-	E	-	-	-	Aminotransferase
COJIECFE_00221	2.07e-102	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
COJIECFE_00222	2.43e-18	-	-	-	-	-	-	-	-
COJIECFE_00223	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
COJIECFE_00224	9.94e-71	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
COJIECFE_00225	4.47e-296	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
COJIECFE_00226	0.0	yhaN	-	-	L	-	-	-	AAA domain
COJIECFE_00227	1.03e-240	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
COJIECFE_00228	1.05e-272	-	-	-	-	-	-	-	-
COJIECFE_00229	1.98e-232	-	-	-	M	-	-	-	Peptidase family S41
COJIECFE_00230	6.59e-227	-	-	-	K	-	-	-	LysR substrate binding domain
COJIECFE_00231	1.16e-142	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
COJIECFE_00232	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
COJIECFE_00233	4.43e-129	-	-	-	-	-	-	-	-
COJIECFE_00234	1.17e-100	-	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside 2-deoxyribosyltransferase
COJIECFE_00235	1.15e-235	ykoT	-	-	M	-	-	-	Glycosyl transferase family 2
COJIECFE_00236	0.0	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
COJIECFE_00237	4.29e-26	-	-	-	S	-	-	-	NUDIX domain
COJIECFE_00238	0.0	-	-	-	S	-	-	-	membrane
COJIECFE_00239	6.04e-218	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
COJIECFE_00240	8.71e-111	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
COJIECFE_00241	1.03e-284	ribA	3.5.4.25, 4.1.99.12	-	H	ko:K02858,ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
COJIECFE_00242	1.23e-106	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
COJIECFE_00243	5.21e-137	-	-	-	S	ko:K09962	-	ko00000	Nucleotidyltransferase
COJIECFE_00244	1.13e-136	-	-	-	-	-	-	-	-
COJIECFE_00245	3.3e-151	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
COJIECFE_00246	1.4e-145	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_00247	3e-308	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
COJIECFE_00248	0.0	-	-	-	-	-	-	-	-
COJIECFE_00249	1.65e-80	-	-	-	-	-	-	-	-
COJIECFE_00250	3.92e-247	-	-	-	S	-	-	-	Fn3-like domain
COJIECFE_00251	2.82e-138	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
COJIECFE_00252	5.76e-135	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
COJIECFE_00253	2.93e-152	draG	-	-	O	-	-	-	ADP-ribosylglycohydrolase
COJIECFE_00254	1.09e-196	prsA	5.2.1.8	-	M	ko:K01802,ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
COJIECFE_00255	9.6e-73	-	-	-	-	-	-	-	-
COJIECFE_00256	3.6e-106	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
COJIECFE_00257	1.1e-174	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_00258	8.17e-285	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
COJIECFE_00259	5.95e-196	ytmP	-	-	M	-	-	-	Choline/ethanolamine kinase
COJIECFE_00260	2.8e-155	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
COJIECFE_00261	2.94e-71	ytzB	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
COJIECFE_00262	1.29e-148	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
COJIECFE_00263	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
COJIECFE_00264	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
COJIECFE_00265	3.04e-29	-	-	-	S	-	-	-	Virus attachment protein p12 family
COJIECFE_00266	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
COJIECFE_00267	2.87e-47	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	FeoA domain
COJIECFE_00268	1.1e-184	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
COJIECFE_00269	5.21e-311	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
COJIECFE_00270	2.6e-298	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
COJIECFE_00271	2.71e-108	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
COJIECFE_00272	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
COJIECFE_00273	4.07e-60	-	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
COJIECFE_00274	1.04e-141	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
COJIECFE_00275	8.51e-155	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
COJIECFE_00276	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
COJIECFE_00277	1.85e-201	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
COJIECFE_00278	1.92e-133	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
COJIECFE_00279	1.58e-117	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
COJIECFE_00280	8.92e-317	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
COJIECFE_00281	6.05e-221	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
COJIECFE_00282	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
COJIECFE_00283	2.37e-109	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
COJIECFE_00284	6.92e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
COJIECFE_00285	6.88e-73	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
COJIECFE_00286	1.13e-73	-	-	-	-	-	-	-	-
COJIECFE_00287	3.89e-304	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
COJIECFE_00288	1.67e-250	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
COJIECFE_00289	1.64e-83	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
COJIECFE_00290	2.79e-174	racD	5.1.1.13	-	G	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
COJIECFE_00291	9.51e-317	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
COJIECFE_00292	4.45e-114	-	-	-	-	-	-	-	-
COJIECFE_00293	5.7e-127	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
COJIECFE_00294	3.81e-276	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
COJIECFE_00295	2.19e-67	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
COJIECFE_00296	4.19e-153	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
COJIECFE_00297	1.71e-149	yqeK	-	-	H	-	-	-	Hydrolase, HD family
COJIECFE_00298	3.54e-75	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
COJIECFE_00299	3.3e-180	yqeM	-	-	Q	-	-	-	Methyltransferase
COJIECFE_00300	1.76e-279	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
COJIECFE_00301	1.05e-126	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
COJIECFE_00302	1.77e-123	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
COJIECFE_00303	1.13e-225	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
COJIECFE_00304	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
COJIECFE_00305	3.12e-311	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
COJIECFE_00306	1.38e-155	csrR	-	-	K	-	-	-	response regulator
COJIECFE_00307	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
COJIECFE_00308	1.93e-218	ubiA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
COJIECFE_00309	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
COJIECFE_00310	9.59e-289	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
COJIECFE_00311	1.77e-122	-	-	-	S	-	-	-	SdpI/YhfL protein family
COJIECFE_00312	1.4e-208	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
COJIECFE_00313	1.37e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
COJIECFE_00314	4.46e-179	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
COJIECFE_00315	1.72e-120	XK27_09705	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
COJIECFE_00316	1.09e-83	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
COJIECFE_00317	6.88e-257	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
COJIECFE_00318	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
COJIECFE_00319	6.11e-249	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
COJIECFE_00320	7.5e-146	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
COJIECFE_00321	1.09e-105	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
COJIECFE_00322	1.47e-136	-	-	-	S	-	-	-	membrane
COJIECFE_00323	2.33e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
COJIECFE_00324	2.5e-71	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
COJIECFE_00325	0.0	-	-	-	S	-	-	-	membrane
COJIECFE_00326	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
COJIECFE_00327	5.33e-30	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
COJIECFE_00328	9.29e-132	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
COJIECFE_00329	2.03e-152	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
COJIECFE_00330	6.33e-46	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
COJIECFE_00331	2.6e-231	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
COJIECFE_00332	1.62e-141	pepE	3.4.13.21	-	E	ko:K05995	-	ko00000,ko01000,ko01002	Belongs to the peptidase S51 family
COJIECFE_00333	1.15e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
COJIECFE_00334	1.44e-31	WQ51_02665	-	-	S	-	-	-	Protein of unknown function (DUF3042)
COJIECFE_00335	7.77e-179	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
COJIECFE_00336	3.8e-224	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
COJIECFE_00337	7.79e-85	glnR	-	-	K	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000,ko03000	Transcriptional regulator
COJIECFE_00338	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
COJIECFE_00339	1.77e-205	-	-	-	-	-	-	-	-
COJIECFE_00340	1.34e-232	-	-	-	-	-	-	-	-
COJIECFE_00341	2.92e-126	-	-	-	S	-	-	-	Protein conserved in bacteria
COJIECFE_00342	2.56e-72	-	-	-	-	-	-	-	-
COJIECFE_00343	2.97e-41	-	-	-	-	-	-	-	-
COJIECFE_00365	1.08e-117	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
COJIECFE_00366	2.81e-178	yhfI	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
COJIECFE_00367	9.28e-89	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
COJIECFE_00368	7.12e-170	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
COJIECFE_00369	1.85e-263	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
COJIECFE_00370	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
COJIECFE_00371	2.24e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
COJIECFE_00372	9.08e-157	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
COJIECFE_00373	1.29e-193	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
COJIECFE_00374	6.31e-222	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
COJIECFE_00375	7.21e-150	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
COJIECFE_00376	1.6e-246	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
COJIECFE_00377	2.68e-75	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
COJIECFE_00378	7.81e-263	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
COJIECFE_00379	4.82e-55	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
COJIECFE_00380	1.12e-207	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
COJIECFE_00382	3.59e-301	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
COJIECFE_00383	2.5e-147	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
COJIECFE_00384	1.41e-124	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
COJIECFE_00385	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
COJIECFE_00386	4.1e-223	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
COJIECFE_00387	3.22e-82	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
COJIECFE_00388	1.35e-100	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
COJIECFE_00389	1.74e-224	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
COJIECFE_00390	7.01e-76	ftsL	-	-	D	-	-	-	Cell division protein FtsL
COJIECFE_00391	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
COJIECFE_00392	2.81e-231	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
COJIECFE_00393	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
COJIECFE_00394	1.67e-251	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
COJIECFE_00395	2.34e-208	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
COJIECFE_00396	3.55e-312	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
COJIECFE_00397	9.39e-295	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
COJIECFE_00398	1.56e-93	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
COJIECFE_00399	6.45e-49	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
COJIECFE_00400	2.06e-187	ylmH	-	-	S	-	-	-	S4 domain protein
COJIECFE_00401	6.52e-124	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
COJIECFE_00402	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
COJIECFE_00403	3.46e-242	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
COJIECFE_00404	3.51e-125	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
COJIECFE_00405	7.74e-47	-	-	-	-	-	-	-	-
COJIECFE_00406	5.85e-158	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
COJIECFE_00407	4.88e-276	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
COJIECFE_00408	4.94e-75	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
COJIECFE_00409	3.19e-285	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
COJIECFE_00410	9.64e-307	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
COJIECFE_00411	4.64e-150	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
COJIECFE_00412	4.17e-153	-	-	-	N	-	-	-	WxL domain surface cell wall-binding
COJIECFE_00413	4.97e-248	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF916)
COJIECFE_00414	0.0	-	-	-	N	-	-	-	domain, Protein
COJIECFE_00415	2.41e-157	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
COJIECFE_00416	1.02e-155	-	-	-	S	-	-	-	repeat protein
COJIECFE_00417	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
COJIECFE_00418	5.35e-220	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
COJIECFE_00419	5.26e-168	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
COJIECFE_00420	2.16e-39	-	-	-	-	-	-	-	-
COJIECFE_00421	3.45e-240	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
COJIECFE_00422	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
COJIECFE_00423	4.86e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
COJIECFE_00424	6.45e-111	-	-	-	-	-	-	-	-
COJIECFE_00425	3.95e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
COJIECFE_00426	1.21e-268	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
COJIECFE_00427	8.65e-228	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
COJIECFE_00428	2.36e-285	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
COJIECFE_00429	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
COJIECFE_00430	2.15e-209	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	L-malate dehydrogenase activity
COJIECFE_00431	2.64e-62	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
COJIECFE_00432	1.23e-177	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
COJIECFE_00433	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
COJIECFE_00434	1.82e-256	-	-	-	-	-	-	-	-
COJIECFE_00435	9.51e-135	-	-	-	-	-	-	-	-
COJIECFE_00436	0.0	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
COJIECFE_00437	6.09e-289	-	-	-	-	-	-	-	-
COJIECFE_00438	8.38e-260	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
COJIECFE_00439	0.0	pyc	6.4.1.1	-	C	ko:K01958	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
COJIECFE_00440	1.91e-66	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
COJIECFE_00441	7.08e-131	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
COJIECFE_00442	2.56e-110	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COJIECFE_00443	1.01e-249	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
COJIECFE_00444	6.29e-163	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
COJIECFE_00445	7.1e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
COJIECFE_00446	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
COJIECFE_00447	9.6e-121	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
COJIECFE_00448	2.07e-240	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
COJIECFE_00449	1.18e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
COJIECFE_00450	2.9e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
COJIECFE_00451	4.48e-261	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
COJIECFE_00452	1.29e-200	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
COJIECFE_00453	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
COJIECFE_00454	5.89e-204	-	-	-	S	-	-	-	Tetratricopeptide repeat
COJIECFE_00455	4.38e-286	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
COJIECFE_00456	5.41e-280	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
COJIECFE_00457	7.8e-300	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
COJIECFE_00458	9.6e-143	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
COJIECFE_00459	1.3e-65	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
COJIECFE_00460	6.47e-95	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
COJIECFE_00461	5.12e-31	-	-	-	-	-	-	-	-
COJIECFE_00462	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
COJIECFE_00463	3.97e-173	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
COJIECFE_00464	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
COJIECFE_00465	8.45e-162	epsB	-	-	M	-	-	-	biosynthesis protein
COJIECFE_00466	2.02e-156	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
COJIECFE_00467	1.59e-188	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
COJIECFE_00468	8.71e-231	cps4D	5.1.3.2, 5.1.3.25	-	M	ko:K01784,ko:K17947	ko00052,ko00520,ko00523,ko01100,ko01130,map00052,map00520,map00523,map01100,map01130	ko00000,ko00001,ko00002,ko01000	RmlD substrate binding domain
COJIECFE_00469	3.31e-164	tuaA	-	-	M	-	-	-	Bacterial sugar transferase
COJIECFE_00470	6.63e-258	cps4F	-	-	M	-	-	-	Glycosyl transferases group 1
COJIECFE_00471	3.25e-195	cps4G	-	-	M	-	-	-	Glycosyltransferase Family 4
COJIECFE_00472	1.91e-297	-	-	-	-	-	-	-	-
COJIECFE_00473	3.4e-228	cps4I	-	-	M	-	-	-	Glycosyltransferase like family 2
COJIECFE_00474	0.0	cps4J	-	-	S	-	-	-	MatE
COJIECFE_00475	0.0	-	3.1.4.53	-	S	ko:K03651	ko00230,ko02025,map00230,map02025	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
COJIECFE_00476	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
COJIECFE_00477	1e-216	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
COJIECFE_00478	3.02e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
COJIECFE_00479	1.55e-311	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
COJIECFE_00480	1.34e-61	-	-	-	-	-	-	-	-
COJIECFE_00481	8.34e-228	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
COJIECFE_00482	7.09e-180	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
COJIECFE_00483	1.84e-67	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
COJIECFE_00484	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
COJIECFE_00485	1.52e-120	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COJIECFE_00486	3.58e-129	-	-	-	K	-	-	-	Helix-turn-helix domain
COJIECFE_00487	6.75e-269	-	-	-	EGP	-	-	-	Major facilitator Superfamily
COJIECFE_00488	2.84e-75	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
COJIECFE_00489	6.34e-178	-	-	-	Q	-	-	-	Methyltransferase
COJIECFE_00490	1.75e-43	-	-	-	-	-	-	-	-
COJIECFE_00491	1.28e-67	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
COJIECFE_00498	4.16e-51	-	-	-	S	-	-	-	Membrane
COJIECFE_00501	2.9e-24	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
COJIECFE_00503	6.04e-87	-	-	-	S	-	-	-	DNA binding
COJIECFE_00506	1.38e-07	-	-	-	-	-	-	-	-
COJIECFE_00510	2.56e-22	-	-	-	-	-	-	-	-
COJIECFE_00513	1.15e-47	-	-	-	L	-	-	-	DnaD domain protein
COJIECFE_00514	5.51e-64	-	-	-	L	-	-	-	DnaD domain protein
COJIECFE_00515	6e-211	pi346	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
COJIECFE_00517	4.9e-31	-	-	-	-	-	-	-	-
COJIECFE_00521	1.25e-37	-	-	-	S	-	-	-	YopX protein
COJIECFE_00522	1.23e-49	-	-	-	-	-	-	-	-
COJIECFE_00523	6.63e-41	-	-	-	-	-	-	-	-
COJIECFE_00524	1.96e-83	-	-	-	S	-	-	-	Transcriptional regulator, RinA family
COJIECFE_00526	4.49e-17	-	-	-	V	-	-	-	HNH nucleases
COJIECFE_00527	2.51e-111	-	-	-	L	-	-	-	HNH nucleases
COJIECFE_00528	1.91e-104	-	-	-	S	-	-	-	Phage terminase, small subunit
COJIECFE_00529	2.14e-107	-	-	-	S	-	-	-	Phage Terminase
COJIECFE_00530	1.46e-263	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
COJIECFE_00531	1.21e-135	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_00532	8.04e-190	-	3.1.3.23	-	S	ko:K07757	-	ko00000,ko01000	Sucrose-6F-phosphate phosphohydrolase
COJIECFE_00533	5.44e-159	-	-	-	T	-	-	-	EAL domain
COJIECFE_00534	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
COJIECFE_00535	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COJIECFE_00536	2.18e-182	ybbR	-	-	S	-	-	-	YbbR-like protein
COJIECFE_00537	2.39e-191	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
COJIECFE_00538	4.67e-155	-	-	-	S	-	-	-	Protein of unknown function (DUF1361)
COJIECFE_00539	3.07e-119	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
COJIECFE_00540	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
COJIECFE_00541	6.24e-214	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
COJIECFE_00542	3.09e-213	ysjB	-	-	S	ko:K03810	-	ko00000	Oxidoreductase family, NAD-binding Rossmann fold
COJIECFE_00543	2.53e-198	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
COJIECFE_00544	2.41e-129	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
COJIECFE_00545	1.03e-113	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
COJIECFE_00546	1.29e-105	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
COJIECFE_00547	1.23e-227	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
COJIECFE_00548	1.4e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
COJIECFE_00549	1.98e-199	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
COJIECFE_00550	2.29e-136	-	-	-	-	-	-	-	-
COJIECFE_00551	9.36e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
COJIECFE_00552	0.0	glnP	-	-	P	ko:K02029,ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
COJIECFE_00553	0.0	-	-	-	M	-	-	-	Domain of unknown function (DUF5011)
COJIECFE_00554	2.4e-107	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
COJIECFE_00555	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
COJIECFE_00556	3.83e-179	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
COJIECFE_00557	1.76e-43	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
COJIECFE_00558	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
COJIECFE_00559	4.68e-167	-	-	-	-	-	-	-	-
COJIECFE_00560	0.0	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
COJIECFE_00561	7.15e-179	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
COJIECFE_00562	1.07e-284	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
COJIECFE_00563	2.02e-245	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
COJIECFE_00564	5.75e-242	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
COJIECFE_00565	1.14e-311	rpoN	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	Sigma-54 factor, core binding domain
COJIECFE_00567	5.11e-133	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
COJIECFE_00568	5.18e-224	-	1.1.1.26	-	CH	ko:K00015	ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
COJIECFE_00569	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
COJIECFE_00570	1.21e-215	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
COJIECFE_00571	5.32e-242	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
COJIECFE_00572	1.71e-207	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
COJIECFE_00573	6.07e-114	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
COJIECFE_00574	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
COJIECFE_00575	7.5e-302	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
COJIECFE_00576	2.21e-113	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
COJIECFE_00577	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
COJIECFE_00578	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
COJIECFE_00579	3.17e-150	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
COJIECFE_00580	4.19e-265	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	transporter
COJIECFE_00581	4.63e-135	aad	3.4.13.22	-	E	ko:K08641	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
COJIECFE_00582	0.0	nox2	-	-	S	-	-	-	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
COJIECFE_00583	6.88e-169	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
COJIECFE_00584	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
COJIECFE_00585	2.07e-60	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
COJIECFE_00586	4.31e-141	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
COJIECFE_00587	8.65e-226	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
COJIECFE_00588	0.0	nox	-	-	C	-	-	-	NADH oxidase
COJIECFE_00589	3.69e-159	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
COJIECFE_00590	1.13e-218	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
COJIECFE_00591	2.82e-235	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
COJIECFE_00592	2.55e-212	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COJIECFE_00593	2.55e-225	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
COJIECFE_00594	2.87e-71	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
COJIECFE_00595	2.78e-65	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	positive regulation of macromolecule biosynthetic process
COJIECFE_00596	1.55e-150	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
COJIECFE_00597	2.31e-179	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
COJIECFE_00598	9.78e-190	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
COJIECFE_00599	5.04e-200	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
COJIECFE_00600	1.83e-205	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
COJIECFE_00601	3.99e-200	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
COJIECFE_00602	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
COJIECFE_00603	1.49e-170	phoP	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
COJIECFE_00604	3.68e-276	minJ	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
COJIECFE_00605	1.69e-257	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
COJIECFE_00606	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
COJIECFE_00607	1.48e-128	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
COJIECFE_00608	8.08e-162	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
COJIECFE_00609	0.0	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
COJIECFE_00610	8.71e-148	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
COJIECFE_00611	6.57e-199	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
COJIECFE_00612	7.29e-247	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
COJIECFE_00613	0.0	ydaO	-	-	E	-	-	-	amino acid
COJIECFE_00614	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
COJIECFE_00615	9.82e-55	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
COJIECFE_00616	4.81e-140	ydiL	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
COJIECFE_00617	3.67e-154	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
COJIECFE_00618	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
COJIECFE_00619	3.62e-249	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
COJIECFE_00620	5.74e-108	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	This enzyme acetylates the N-terminal alanine of ribosomal protein S18
COJIECFE_00621	4.66e-131	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
COJIECFE_00622	6.84e-167	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
COJIECFE_00623	1.41e-241	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
COJIECFE_00624	3.8e-176	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
COJIECFE_00625	6.51e-178	phnE2	-	-	U	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter permease
COJIECFE_00626	3.33e-184	phnE1	-	-	U	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
COJIECFE_00627	1.97e-187	phnX	3.11.1.1	-	E	ko:K05306	ko00440,ko01100,ko01120,map00440,map01100,map01120	ko00000,ko00001,ko01000	Belongs to the HAD-like hydrolase superfamily. PhnX family
COJIECFE_00628	5.13e-268	phnW	2.6.1.37	-	E	ko:K03430	ko00440,ko01100,ko01120,map00440,map01100,map01120	ko00000,ko00001,ko01000,ko01007	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
COJIECFE_00629	7.03e-246	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
COJIECFE_00630	3.17e-191	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
COJIECFE_00631	8.85e-212	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
COJIECFE_00632	9.89e-76	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
COJIECFE_00633	1.35e-238	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
COJIECFE_00634	1.39e-70	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
COJIECFE_00635	1.28e-152	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
COJIECFE_00636	1.01e-51	yaaL	-	-	S	-	-	-	Protein of unknown function (DUF2508)
COJIECFE_00637	6.22e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
COJIECFE_00638	2.05e-62	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
COJIECFE_00639	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
COJIECFE_00640	7.57e-119	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
COJIECFE_00641	2.73e-140	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
COJIECFE_00642	5.92e-50	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
COJIECFE_00643	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
COJIECFE_00644	2.47e-253	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
COJIECFE_00645	2.77e-139	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
COJIECFE_00647	6.19e-208	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_00648	2.95e-207	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
COJIECFE_00649	1.66e-211	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
COJIECFE_00650	2.45e-101	-	-	-	K	-	-	-	Winged helix DNA-binding domain
COJIECFE_00651	0.0	ycaM	-	-	E	-	-	-	amino acid
COJIECFE_00652	2.1e-165	aroC1	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Type I 3-dehydroquinase
COJIECFE_00653	4.3e-44	-	-	-	-	-	-	-	-
COJIECFE_00654	5.65e-226	-	-	-	M	-	-	-	Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
COJIECFE_00655	0.0	-	-	-	M	-	-	-	Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
COJIECFE_00656	0.0	-	-	-	M	-	-	-	Domain of unknown function (DUF5011)
COJIECFE_00657	1.17e-101	fld	-	-	C	ko:K03839	-	ko00000	Flavodoxin
COJIECFE_00658	0.0	-	-	-	-	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	-
COJIECFE_00659	2.25e-131	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
COJIECFE_00660	4.12e-226	serA1	-	-	EH	-	-	-	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
COJIECFE_00661	3.26e-203	-	-	-	EG	-	-	-	EamA-like transporter family
COJIECFE_00662	2.05e-233	ykpB	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
COJIECFE_00663	5.06e-196	-	-	-	S	-	-	-	hydrolase
COJIECFE_00664	7.63e-107	-	-	-	-	-	-	-	-
COJIECFE_00665	1.75e-156	pgm7	-	-	G	-	-	-	Phosphoglycerate mutase family
COJIECFE_00666	1.4e-181	epsV	-	-	S	-	-	-	glycosyl transferase family 2
COJIECFE_00667	6.37e-169	gntR	-	-	K	ko:K03489	-	ko00000,ko03000	UTRA
COJIECFE_00668	1.86e-64	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
COJIECFE_00669	6.7e-74	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
COJIECFE_00670	0.0	pbg5	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
COJIECFE_00671	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
COJIECFE_00672	1.24e-315	dsdA	4.3.1.18	-	E	ko:K01753	ko00260,map00260	ko00000,ko00001,ko01000	Belongs to the serine threonine dehydratase family. DsdA subfamily
COJIECFE_00673	8.66e-173	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
COJIECFE_00674	3.78e-249	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-type multidrug transport system, permease component
COJIECFE_00675	9.69e-149	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_00676	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
COJIECFE_00677	7.54e-115	yrxA	-	-	S	ko:K07105	-	ko00000	3H domain
COJIECFE_00678	3.26e-262	-	-	-	EGP	-	-	-	Transmembrane secretion effector
COJIECFE_00679	3.64e-293	-	-	-	S	-	-	-	Sterol carrier protein domain
COJIECFE_00680	1.65e-267	ybhE	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
COJIECFE_00681	3.94e-49	XK27_01315	-	-	S	-	-	-	Protein of unknown function (DUF2829)
COJIECFE_00682	1.62e-173	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
COJIECFE_00683	2.26e-91	-	-	-	FG	-	-	-	Scavenger mRNA decapping enzyme C-term binding
COJIECFE_00684	3.24e-132	-	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Belongs to the Nudix hydrolase family
COJIECFE_00685	4.22e-143	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
COJIECFE_00686	4.72e-40	-	-	-	S	-	-	-	Pentapeptide repeats (8 copies)
COJIECFE_00687	1.33e-185	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
COJIECFE_00688	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
COJIECFE_00689	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
COJIECFE_00691	4.93e-69	-	-	-	-	-	-	-	-
COJIECFE_00692	4.34e-151	-	-	-	-	-	-	-	-
COJIECFE_00693	1.16e-110	-	-	-	F	-	-	-	belongs to the nudix hydrolase family
COJIECFE_00694	8.32e-297	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
COJIECFE_00695	4.79e-13	-	-	-	-	-	-	-	-
COJIECFE_00696	4.87e-66	-	-	-	-	-	-	-	-
COJIECFE_00697	1.76e-114	-	-	-	-	-	-	-	-
COJIECFE_00698	4.02e-95	gtcA	-	-	S	-	-	-	Teichoic acid glycosylation protein
COJIECFE_00699	1.08e-47	-	-	-	-	-	-	-	-
COJIECFE_00700	2.7e-104	usp5	-	-	T	-	-	-	universal stress protein
COJIECFE_00701	3.41e-190	-	-	-	-	-	-	-	-
COJIECFE_00702	7.89e-212	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_00703	8.2e-81	-	-	-	K	-	-	-	Transcriptional regulator, GntR family
COJIECFE_00704	1.37e-55	-	-	-	-	-	-	-	-
COJIECFE_00705	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
COJIECFE_00706	2.05e-178	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_00707	3.7e-233	ansB	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
COJIECFE_00708	4.15e-191	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
COJIECFE_00709	3.44e-152	cah	4.2.1.1	-	P	ko:K01674	ko00910,map00910	ko00000,ko00001,ko01000	Eukaryotic-type carbonic anhydrase
COJIECFE_00710	2.04e-189	ptp3	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
COJIECFE_00711	2.01e-243	lplL	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Bacterial lipoate protein ligase C-terminus
COJIECFE_00712	9.92e-143	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
COJIECFE_00713	7.9e-305	XK27_09615	1.5.1.36	-	S	ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	reductase
COJIECFE_00714	1.26e-102	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
COJIECFE_00715	1.94e-268	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
COJIECFE_00716	1.38e-167	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
COJIECFE_00717	3.36e-55	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
COJIECFE_00718	1.63e-162	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
COJIECFE_00719	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
COJIECFE_00720	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
COJIECFE_00721	4.92e-242	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
COJIECFE_00722	5.35e-133	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
COJIECFE_00723	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
COJIECFE_00724	9.06e-279	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
COJIECFE_00725	4.17e-163	-	-	-	E	-	-	-	Methionine synthase
COJIECFE_00726	0.0	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
COJIECFE_00727	6.18e-120	-	-	-	-	-	-	-	-
COJIECFE_00728	1.25e-199	-	-	-	T	-	-	-	EAL domain
COJIECFE_00729	2.24e-206	-	-	-	GM	-	-	-	NmrA-like family
COJIECFE_00730	5.67e-280	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	Permease family
COJIECFE_00731	3.1e-305	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
COJIECFE_00732	0.0	pucR_2	-	-	QT	ko:K09684	-	ko00000,ko03000	Purine catabolism regulatory protein-like family
COJIECFE_00733	7.13e-123	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
COJIECFE_00734	1.22e-220	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
COJIECFE_00735	2.38e-310	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
COJIECFE_00736	3.36e-272	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
COJIECFE_00737	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
COJIECFE_00738	4.24e-218	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
COJIECFE_00739	1.27e-160	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
COJIECFE_00740	6.64e-146	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
COJIECFE_00741	1.12e-216	oroP	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Putative inner membrane exporter, YdcZ
COJIECFE_00742	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
COJIECFE_00743	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
COJIECFE_00744	4.52e-123	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
COJIECFE_00745	3.7e-148	-	-	-	GM	-	-	-	NAD(P)H-binding
COJIECFE_00746	0.0	-	-	-	L	-	-	-	DNA helicase
COJIECFE_00747	1.38e-179	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Carbon-nitrogen hydrolase
COJIECFE_00748	3.73e-240	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
COJIECFE_00749	2.69e-166	-	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
COJIECFE_00750	0.0	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_00751	9.68e-34	-	-	-	-	-	-	-	-
COJIECFE_00752	3.55e-99	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
COJIECFE_00753	0.0	celB	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_00754	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
COJIECFE_00755	6.97e-209	-	-	-	GK	-	-	-	ROK family
COJIECFE_00756	1.14e-173	yecA	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
COJIECFE_00757	1.7e-243	dus	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
COJIECFE_00758	1.36e-214	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
COJIECFE_00759	1.37e-290	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
COJIECFE_00760	4.65e-229	-	-	-	-	-	-	-	-
COJIECFE_00761	8.73e-171	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
COJIECFE_00762	3.74e-204	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
COJIECFE_00763	6.59e-92	-	-	-	F	-	-	-	DNA mismatch repair protein MutT
COJIECFE_00764	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
COJIECFE_00766	8.6e-272	-	-	-	EGP	ko:K02030	-	ko00000,ko00002,ko02000	Drug resistance transporter Bcr CflA subfamily
COJIECFE_00767	2.15e-135	mutR	-	-	K	ko:K20373,ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	sequence-specific DNA binding
COJIECFE_00769	1.63e-187	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
COJIECFE_00770	9.27e-127	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
COJIECFE_00771	2.5e-203	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
COJIECFE_00772	6.87e-50	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
COJIECFE_00773	2.53e-206	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
COJIECFE_00774	9.03e-229	-	-	-	S	ko:K06889	-	ko00000	Prolyl oligopeptidase family
COJIECFE_00775	8.05e-166	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
COJIECFE_00776	6.39e-169	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
COJIECFE_00777	5.67e-27	-	-	-	M	ko:K21493	-	ko00000,ko01000,ko02048	self proteolysis
COJIECFE_00778	2.95e-57	-	-	-	S	-	-	-	ankyrin repeats
COJIECFE_00779	5.3e-49	-	-	-	-	-	-	-	-
COJIECFE_00780	1.96e-189	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
COJIECFE_00781	5.78e-292	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
COJIECFE_00782	4.31e-191	bla1	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
COJIECFE_00783	3.26e-228	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
COJIECFE_00784	7.42e-232	-	-	-	S	-	-	-	DUF218 domain
COJIECFE_00785	2.04e-177	-	-	-	-	-	-	-	-
COJIECFE_00786	1.45e-191	yxeH	-	-	S	-	-	-	hydrolase
COJIECFE_00787	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
COJIECFE_00788	6.05e-198	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
COJIECFE_00789	2.87e-101	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
COJIECFE_00790	2.96e-89	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
COJIECFE_00791	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
COJIECFE_00792	1.37e-310	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
COJIECFE_00793	2.37e-290	sdaC	-	-	E	ko:K03837	-	ko00000,ko02000	amino acid
COJIECFE_00794	7.51e-159	sdhB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
COJIECFE_00795	2.31e-201	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
COJIECFE_00796	6.59e-170	-	-	-	S	-	-	-	YheO-like PAS domain
COJIECFE_00797	4.01e-36	-	-	-	-	-	-	-	-
COJIECFE_00798	2.08e-302	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
COJIECFE_00799	3.62e-305	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
COJIECFE_00800	1.91e-55	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
COJIECFE_00801	1.49e-273	-	-	-	J	-	-	-	translation release factor activity
COJIECFE_00802	5.22e-163	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
COJIECFE_00803	5.35e-121	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
COJIECFE_00804	1.78e-191	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
COJIECFE_00805	1.84e-189	-	-	-	-	-	-	-	-
COJIECFE_00806	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
COJIECFE_00807	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
COJIECFE_00808	9.32e-81	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
COJIECFE_00809	5e-275	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
COJIECFE_00810	2.58e-85	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
COJIECFE_00811	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
COJIECFE_00812	2.77e-248	-	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	ABC transporter, substratebinding protein
COJIECFE_00813	7.44e-203	-	-	-	U	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
COJIECFE_00814	3.35e-170	ytlC	3.6.3.36	-	P	ko:K02049,ko:K10831,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
COJIECFE_00815	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
COJIECFE_00816	2.61e-260	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
COJIECFE_00817	4.04e-241	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
COJIECFE_00818	2.79e-293	argJ	2.3.1.1, 2.3.1.35	-	E	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
COJIECFE_00819	2.36e-166	argB	2.7.2.8	-	F	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
COJIECFE_00820	4.1e-272	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	acetylornithine
COJIECFE_00821	5.09e-239	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
COJIECFE_00822	1.3e-110	queT	-	-	S	-	-	-	QueT transporter
COJIECFE_00823	4.87e-148	-	-	-	S	-	-	-	(CBS) domain
COJIECFE_00824	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
COJIECFE_00825	2.79e-226	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
COJIECFE_00826	1.43e-129	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
COJIECFE_00827	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
COJIECFE_00828	0.0	yabM	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
COJIECFE_00829	7.72e-57	yabO	-	-	J	-	-	-	S4 domain protein
COJIECFE_00831	2.02e-83	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
COJIECFE_00832	1.07e-103	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
COJIECFE_00833	0.0	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
COJIECFE_00834	4.3e-124	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
COJIECFE_00835	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
COJIECFE_00836	1.93e-209	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
COJIECFE_00837	5.33e-243	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
COJIECFE_00838	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
COJIECFE_00839	1.14e-18	-	-	-	-	-	-	-	-
COJIECFE_00840	8.53e-34	plnJ	-	-	-	-	-	-	-
COJIECFE_00841	3.29e-32	plnK	-	-	-	-	-	-	-
COJIECFE_00842	2.68e-150	-	-	-	-	-	-	-	-
COJIECFE_00843	6.24e-25	plnR	-	-	-	-	-	-	-
COJIECFE_00844	1.15e-43	-	-	-	-	-	-	-	-
COJIECFE_00845	3.65e-66	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
COJIECFE_00849	8.8e-265	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
COJIECFE_00850	1.2e-85	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
COJIECFE_00851	1.06e-220	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
COJIECFE_00852	8.38e-192	-	-	-	S	-	-	-	hydrolase
COJIECFE_00853	4.75e-212	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_00854	5.9e-188	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
COJIECFE_00855	3.18e-262	-	-	-	EGP	-	-	-	Transporter, major facilitator family protein
COJIECFE_00856	4.56e-154	lacA	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
COJIECFE_00857	2.14e-174	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
COJIECFE_00858	0.0	glpD	1.1.3.21, 1.1.5.3	-	C	ko:K00105,ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	C-terminal domain of alpha-glycerophosphate oxidase
COJIECFE_00859	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
COJIECFE_00860	0.0	gshR	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulphide oxidoreductase
COJIECFE_00861	2.7e-230	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_00862	0.0	proWX	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
COJIECFE_00863	1.94e-100	-	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA-DNA hybrid ribonuclease activity
COJIECFE_00864	0.0	-	-	-	-	-	-	-	-
COJIECFE_00865	1.07e-208	yneD	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
COJIECFE_00866	1.49e-223	rihA	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
COJIECFE_00867	2.43e-103	accB3	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
COJIECFE_00868	2.16e-103	-	-	-	-	-	-	-	-
COJIECFE_00869	8.37e-108	-	-	-	K	-	-	-	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
COJIECFE_00870	1.96e-295	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
COJIECFE_00871	1.31e-124	yxkA	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
COJIECFE_00872	5.34e-72	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
COJIECFE_00873	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
COJIECFE_00874	4.83e-153	rpiA2	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
COJIECFE_00875	8.61e-132	zmp1	-	-	O	-	-	-	Zinc-dependent metalloprotease
COJIECFE_00876	8.95e-60	-	-	-	-	-	-	-	-
COJIECFE_00877	7.39e-226	hicD1	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
COJIECFE_00878	1.66e-305	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
COJIECFE_00879	6.03e-193	-	-	-	P	-	-	-	Major Facilitator Superfamily
COJIECFE_00880	8.44e-119	-	-	-	P	-	-	-	Major Facilitator Superfamily
COJIECFE_00881	1.55e-117	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
COJIECFE_00882	6.53e-58	-	-	-	-	-	-	-	-
COJIECFE_00883	9.42e-258	tagH	3.6.3.40	-	GM	ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
COJIECFE_00884	8.13e-199	tagG	-	-	U	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport permease protein
COJIECFE_00885	1.1e-280	-	-	-	-	-	-	-	-
COJIECFE_00886	1.05e-282	mtnE	-	-	E	ko:K08969	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
COJIECFE_00887	4.03e-81	-	-	-	S	-	-	-	CHY zinc finger
COJIECFE_00888	3.52e-226	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
COJIECFE_00889	1.54e-123	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
COJIECFE_00890	6.4e-54	-	-	-	-	-	-	-	-
COJIECFE_00891	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
COJIECFE_00892	7.28e-42	-	-	-	-	-	-	-	-
COJIECFE_00893	1.43e-170	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
COJIECFE_00894	2.36e-305	xylP1	-	-	G	-	-	-	MFS/sugar transport protein
COJIECFE_00896	8.16e-207	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
COJIECFE_00897	0.0	acdH	1.1.1.1, 1.2.1.10, 1.2.1.87	-	C	ko:K04072,ko:K13922	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00640,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Aldehyde dehydrogenase family
COJIECFE_00898	1.08e-243	-	-	-	-	-	-	-	-
COJIECFE_00899	7.53e-208	-	-	-	V	ko:K01990,ko:K16921	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
COJIECFE_00900	5.05e-79	-	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
COJIECFE_00901	2.06e-30	-	-	-	-	-	-	-	-
COJIECFE_00902	1.02e-115	-	-	-	K	-	-	-	acetyltransferase
COJIECFE_00903	1.88e-111	-	-	-	K	-	-	-	GNAT family
COJIECFE_00904	8.08e-110	-	-	-	S	-	-	-	ASCH
COJIECFE_00905	3.68e-125	-	-	-	K	-	-	-	Cupin domain
COJIECFE_00906	5.94e-262	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
COJIECFE_00907	3.14e-190	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
COJIECFE_00908	3.76e-179	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
COJIECFE_00909	3.07e-264	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
COJIECFE_00910	2.18e-53	-	-	-	-	-	-	-	-
COJIECFE_00911	9.59e-288	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
COJIECFE_00912	1.24e-99	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_00913	1.26e-100	-	-	-	S	ko:K02348	-	ko00000	GNAT family
COJIECFE_00914	9.17e-285	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
COJIECFE_00915	2.03e-75	-	-	-	-	-	-	-	-
COJIECFE_00916	0.0	uvrB3	3.1.12.1	-	KL	ko:K07464	-	ko00000,ko01000,ko02048	DEAD_2
COJIECFE_00917	4.65e-168	-	-	-	-	-	-	-	-
COJIECFE_00918	1.05e-227	-	-	-	-	-	-	-	-
COJIECFE_00919	1.41e-86	gcsH1	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	Glycine cleavage H-protein
COJIECFE_00920	1.43e-82	-	-	-	M	-	-	-	LysM domain protein
COJIECFE_00921	9.85e-81	-	-	-	M	-	-	-	Lysin motif
COJIECFE_00922	1.59e-155	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
COJIECFE_00923	1.32e-170	-	-	-	V	ko:K07052	-	ko00000	CAAX protease self-immunity
COJIECFE_00924	1.98e-155	vex2	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
COJIECFE_00925	8.31e-292	vex3	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
COJIECFE_00926	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
COJIECFE_00927	5.62e-137	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
COJIECFE_00928	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
COJIECFE_00929	1.17e-135	-	-	-	K	-	-	-	transcriptional regulator
COJIECFE_00930	2.04e-158	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
COJIECFE_00931	1.49e-63	-	-	-	-	-	-	-	-
COJIECFE_00932	0.0	loxD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
COJIECFE_00933	1.76e-236	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
COJIECFE_00934	2.87e-56	-	-	-	-	-	-	-	-
COJIECFE_00935	3.35e-75	-	-	-	-	-	-	-	-
COJIECFE_00936	6.86e-311	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_00937	1.96e-167	yidA	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
COJIECFE_00938	2.42e-65	-	-	-	-	-	-	-	-
COJIECFE_00939	1.9e-165	rrp2	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
COJIECFE_00940	1.72e-315	hpk2	-	-	T	-	-	-	Histidine kinase
COJIECFE_00941	8.98e-86	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
COJIECFE_00942	0.0	ydiC	-	-	EGP	-	-	-	Major Facilitator
COJIECFE_00943	2.58e-54	-	-	-	-	-	-	-	-
COJIECFE_00944	4.48e-52	-	-	-	-	-	-	-	-
COJIECFE_00945	1.15e-152	-	-	-	-	-	-	-	-
COJIECFE_00946	5.71e-301	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
COJIECFE_00947	2.03e-153	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_00948	4.24e-94	ywnA	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_00949	2.52e-62	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
COJIECFE_00950	3.67e-112	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_00951	6.79e-53	-	-	-	-	-	-	-	-
COJIECFE_00952	5.06e-168	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COJIECFE_00953	1.6e-233	ydbI	-	-	K	-	-	-	AI-2E family transporter
COJIECFE_00954	9.28e-271	xylR	-	-	GK	-	-	-	ROK family
COJIECFE_00955	2.92e-143	-	-	-	-	-	-	-	-
COJIECFE_00956	3.66e-295	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
COJIECFE_00957	3.32e-210	-	-	-	-	-	-	-	-
COJIECFE_00958	1.86e-256	pkn2	-	-	KLT	-	-	-	Protein tyrosine kinase
COJIECFE_00959	9.58e-35	-	-	-	S	-	-	-	Protein of unknown function (DUF4064)
COJIECFE_00960	2.47e-125	-	-	-	S	-	-	-	Domain of unknown function (DUF4352)
COJIECFE_00961	1.49e-93	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
COJIECFE_00962	8.78e-33	-	-	-	-	-	-	-	-
COJIECFE_00963	3.37e-141	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
COJIECFE_00964	5.93e-73	-	-	-	S	-	-	-	branched-chain amino acid
COJIECFE_00965	2.05e-167	-	-	-	E	-	-	-	branched-chain amino acid
COJIECFE_00966	3.92e-115	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
COJIECFE_00967	3.1e-304	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
COJIECFE_00968	5.61e-273	hpk31	-	-	T	-	-	-	Histidine kinase
COJIECFE_00969	1.14e-159	vanR	-	-	K	-	-	-	response regulator
COJIECFE_00970	2.4e-161	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
COJIECFE_00971	3.3e-208	prsA	5.2.1.8	-	M	ko:K01802,ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
COJIECFE_00972	3.49e-270	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
COJIECFE_00973	3.49e-160	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
COJIECFE_00974	6.6e-255	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
COJIECFE_00975	1.4e-40	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
COJIECFE_00976	7.16e-201	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
COJIECFE_00977	2.89e-175	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
COJIECFE_00978	8.63e-191	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
COJIECFE_00979	7.38e-168	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
COJIECFE_00980	1.66e-288	nupG	-	-	F	ko:K16323	-	ko00000,ko02000	Nucleoside
COJIECFE_00981	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
COJIECFE_00982	6.07e-188	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
COJIECFE_00983	3.36e-216	-	-	-	K	-	-	-	LysR substrate binding domain
COJIECFE_00984	4.87e-301	-	-	-	EK	-	-	-	Aminotransferase, class I
COJIECFE_00985	2.13e-167	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
COJIECFE_00986	6.05e-158	tcyB	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
COJIECFE_00987	3.02e-176	-	-	-	E	ko:K10010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
COJIECFE_00988	1.46e-160	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
COJIECFE_00989	1.07e-127	-	-	-	KT	-	-	-	response to antibiotic
COJIECFE_00990	2.86e-68	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator
COJIECFE_00991	7.03e-132	-	-	-	S	-	-	-	Protein of unknown function (DUF1700)
COJIECFE_00992	1.13e-200	-	-	-	S	-	-	-	Putative adhesin
COJIECFE_00993	0.0	pts26BCA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
COJIECFE_00994	0.0	malL	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
COJIECFE_00995	6.12e-232	purR2	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding proteins and sugar binding domain of LacI family
COJIECFE_00996	3.73e-263	-	-	-	S	-	-	-	DUF218 domain
COJIECFE_00997	2.44e-165	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
COJIECFE_00998	5.91e-151	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_00999	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
COJIECFE_01000	6.26e-101	-	-	-	-	-	-	-	-
COJIECFE_01001	6.34e-193	qorB	1.6.5.2	-	GM	ko:K19267	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NmrA-like family
COJIECFE_01002	5.47e-180	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
COJIECFE_01003	2.59e-115	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
COJIECFE_01004	0.0	mngB	3.2.1.170	GH38	G	ko:K15524	-	ko00000,ko01000	Glycosyl hydrolases family 38 N-terminal domain
COJIECFE_01005	6.69e-155	fptC	-	-	U	ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	Phosphotransferase system, EIIC
COJIECFE_01006	2.52e-35	-	2.7.1.202	-	G	ko:K02769	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
COJIECFE_01007	5.55e-22	-	-	-	G	ko:K11203	-	ko00000,ko00002,ko02000	PTS system, fructose subfamily
COJIECFE_01008	2.11e-104	manR	-	-	GKT	ko:K02538,ko:K03491	-	ko00000,ko03000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
COJIECFE_01009	4.08e-101	-	-	-	K	-	-	-	MerR family regulatory protein
COJIECFE_01010	1.52e-199	-	-	-	GM	-	-	-	NmrA-like family
COJIECFE_01011	0.0	pts28ABC	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
COJIECFE_01012	5.08e-164	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
COJIECFE_01014	2.01e-29	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
COJIECFE_01015	2.77e-64	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
COJIECFE_01016	1.4e-302	-	-	-	S	-	-	-	module of peptide synthetase
COJIECFE_01017	1.78e-139	-	-	-	-	-	-	-	-
COJIECFE_01018	1.55e-114	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
COJIECFE_01019	1.28e-77	-	-	-	S	-	-	-	Enterocin A Immunity
COJIECFE_01020	6.46e-49	-	-	-	S	-	-	-	Phospholipase_D-nuclease N-terminal
COJIECFE_01021	4.94e-215	-	3.1.4.17, 3.1.4.53	-	S	ko:K01120,ko:K03651	ko00230,ko02025,map00230,map02025	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
COJIECFE_01022	4.65e-134	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
COJIECFE_01023	9.76e-83	lrgA	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	LrgA family
COJIECFE_01024	2.88e-164	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	LrgB-like family
COJIECFE_01025	3.84e-186	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
COJIECFE_01026	1.03e-34	-	-	-	-	-	-	-	-
COJIECFE_01027	1.48e-152	yugP	-	-	S	ko:K06973	-	ko00000	Putative neutral zinc metallopeptidase
COJIECFE_01028	0.0	-	1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31	-	Q	ko:K10027	ko00906,ko01100,ko01110,map00906,map01100,map01110	ko00000,ko00001,ko01000	Flavin containing amine oxidoreductase
COJIECFE_01029	6.72e-209	crtM	2.5.1.32, 2.5.1.99	-	I	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Squalene/phytoene synthase
COJIECFE_01030	3.85e-234	-	-	-	D	ko:K06889	-	ko00000	Alpha beta
COJIECFE_01031	1.01e-251	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
COJIECFE_01032	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
COJIECFE_01033	2.05e-72	-	-	-	S	-	-	-	Enterocin A Immunity
COJIECFE_01034	3.66e-315	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
COJIECFE_01035	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
COJIECFE_01036	4.17e-235	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
COJIECFE_01037	1.91e-233	oppD	-	-	P	ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
COJIECFE_01038	6.22e-201	-	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
COJIECFE_01039	0.0	amiC	-	-	U	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
COJIECFE_01040	0.0	amiA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
COJIECFE_01041	5.9e-187	ptp2	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
COJIECFE_01042	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
COJIECFE_01044	4.62e-107	-	-	-	-	-	-	-	-
COJIECFE_01045	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	C-terminus of AA_permease
COJIECFE_01046	3.74e-125	-	-	-	V	-	-	-	VanZ like family
COJIECFE_01047	1.26e-247	-	-	-	V	-	-	-	Beta-lactamase
COJIECFE_01048	0.0	pflB	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
COJIECFE_01049	1.12e-206	pflA	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
COJIECFE_01050	8.93e-71	-	-	-	S	-	-	-	Pfam:DUF59
COJIECFE_01051	2.47e-222	ydhF	-	-	S	-	-	-	Aldo keto reductase
COJIECFE_01052	2.42e-127	-	-	-	FG	-	-	-	HIT domain
COJIECFE_01053	8.46e-50	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
COJIECFE_01054	4.29e-101	-	-	-	-	-	-	-	-
COJIECFE_01055	8.79e-156	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
COJIECFE_01056	0.0	-	-	-	U	ko:K03451	-	ko00000	Belongs to the BCCT transporter (TC 2.A.15) family
COJIECFE_01057	0.0	cadA	-	-	P	-	-	-	P-type ATPase
COJIECFE_01059	2.32e-160	-	-	-	S	-	-	-	YjbR
COJIECFE_01060	7.57e-74	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
COJIECFE_01061	6.31e-190	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
COJIECFE_01062	0.0	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
COJIECFE_01063	7.12e-256	glmS2	-	-	M	-	-	-	SIS domain
COJIECFE_01064	3.58e-36	-	-	-	S	-	-	-	Belongs to the LOG family
COJIECFE_01065	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
COJIECFE_01066	0.0	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
COJIECFE_01067	2.48e-215	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
COJIECFE_01068	4.75e-112	pgpA	-	-	I	-	-	-	Phosphatidylglycerophosphatase A
COJIECFE_01069	6.47e-208	-	-	-	GM	-	-	-	NmrA-like family
COJIECFE_01070	2.14e-86	-	-	-	K	ko:K22296	-	ko00000,ko03000	Winged helix DNA-binding domain
COJIECFE_01071	9.97e-94	spxA	-	-	P	ko:K16509	-	ko00000	ArsC family
COJIECFE_01072	3.46e-87	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
COJIECFE_01073	1.7e-70	-	-	-	-	-	-	-	-
COJIECFE_01074	4.98e-275	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific adenine glycosylase
COJIECFE_01075	1.22e-81	-	-	-	-	-	-	-	-
COJIECFE_01076	1.36e-112	-	-	-	-	-	-	-	-
COJIECFE_01077	4.58e-103	hsp3	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
COJIECFE_01078	3.78e-73	-	-	-	-	-	-	-	-
COJIECFE_01079	4.79e-21	-	-	-	-	-	-	-	-
COJIECFE_01080	3.57e-150	-	-	-	GM	-	-	-	NmrA-like family
COJIECFE_01081	2.52e-107	-	-	-	S	ko:K02348	-	ko00000	GNAT family
COJIECFE_01082	9.43e-203	-	-	-	EG	-	-	-	EamA-like transporter family
COJIECFE_01083	2.66e-155	-	-	-	S	-	-	-	membrane
COJIECFE_01084	1.47e-144	-	-	-	S	-	-	-	VIT family
COJIECFE_01085	4.38e-243	pva2	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
COJIECFE_01086	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
COJIECFE_01087	4.64e-96	copR	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
COJIECFE_01088	4.26e-54	-	-	-	-	-	-	-	-
COJIECFE_01089	1.64e-94	-	-	-	S	-	-	-	COG NOG18757 non supervised orthologous group
COJIECFE_01090	2.52e-314	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
COJIECFE_01091	7.21e-35	-	-	-	-	-	-	-	-
COJIECFE_01092	2.55e-65	-	-	-	-	-	-	-	-
COJIECFE_01093	2.51e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF1398)
COJIECFE_01094	0.0	-	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
COJIECFE_01095	1.77e-282	mdtG	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
COJIECFE_01096	6.99e-230	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
COJIECFE_01097	6.1e-101	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
COJIECFE_01098	1.14e-110	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
COJIECFE_01099	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
COJIECFE_01100	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
COJIECFE_01101	2.3e-204	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
COJIECFE_01102	1.36e-209	yvgN	-	-	C	-	-	-	Aldo keto reductase
COJIECFE_01103	5.18e-171	-	-	-	S	-	-	-	Putative threonine/serine exporter
COJIECFE_01104	1.7e-101	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
COJIECFE_01105	2.69e-190	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
COJIECFE_01106	5.94e-118	ymdB	-	-	S	-	-	-	Macro domain protein
COJIECFE_01107	6.47e-124	-	-	-	K	ko:K22041	-	ko00000,ko03000	transcriptional regulator
COJIECFE_01108	1.58e-66	-	-	-	-	-	-	-	-
COJIECFE_01109	1.39e-211	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
COJIECFE_01110	0.0	-	-	-	-	-	-	-	-
COJIECFE_01111	6.48e-244	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF916)
COJIECFE_01112	3.17e-170	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
COJIECFE_01113	1.63e-176	yesN	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
COJIECFE_01114	5.33e-114	-	-	-	K	-	-	-	Winged helix DNA-binding domain
COJIECFE_01115	3.81e-150	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_01116	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
COJIECFE_01117	4.45e-38	-	-	-	-	-	-	-	-
COJIECFE_01118	0.0	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
COJIECFE_01119	9.69e-97	-	-	-	M	-	-	-	PFAM NLP P60 protein
COJIECFE_01120	6.18e-71	-	-	-	-	-	-	-	-
COJIECFE_01121	5.77e-81	-	-	-	-	-	-	-	-
COJIECFE_01123	9.39e-84	-	-	-	-	-	-	-	-
COJIECFE_01125	1.12e-134	-	-	-	K	-	-	-	transcriptional regulator
COJIECFE_01126	1.97e-229	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
COJIECFE_01127	1.98e-173	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
COJIECFE_01128	1.5e-165	-	-	-	S	-	-	-	Gram-negative-bacterium-type cell wall biogenesis
COJIECFE_01129	8.06e-232	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
COJIECFE_01130	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type ATPase
COJIECFE_01131	1.67e-175	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
COJIECFE_01132	2.34e-72	trxA3	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin-like domain
COJIECFE_01133	4.82e-55	yrkD	-	-	S	-	-	-	Metal-sensitive transcriptional repressor
COJIECFE_01134	1.01e-26	-	-	-	-	-	-	-	-
COJIECFE_01135	4.27e-126	dpsB	-	-	P	-	-	-	Belongs to the Dps family
COJIECFE_01136	2.98e-44	copZ	-	-	P	-	-	-	Heavy-metal-associated domain
COJIECFE_01137	1.82e-152	rcfA	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
COJIECFE_01138	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
COJIECFE_01139	5.23e-107	yoaA	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
COJIECFE_01140	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
COJIECFE_01141	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
COJIECFE_01142	1.51e-234	-	-	-	S	-	-	-	Cell surface protein
COJIECFE_01143	1.44e-158	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
COJIECFE_01144	4.23e-129	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
COJIECFE_01145	7.83e-60	-	-	-	-	-	-	-	-
COJIECFE_01146	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
COJIECFE_01147	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
COJIECFE_01148	6.18e-197	ymdB	-	-	S	ko:K02029,ko:K02030,ko:K09769	-	ko00000,ko00002,ko02000	YmdB-like protein
COJIECFE_01149	6.57e-291	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
COJIECFE_01150	2.43e-264	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
COJIECFE_01151	5.21e-293	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
COJIECFE_01152	1.92e-127	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
COJIECFE_01153	4.71e-171	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
COJIECFE_01154	0.0	ymfH	-	-	S	-	-	-	Peptidase M16
COJIECFE_01155	5.88e-295	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
COJIECFE_01156	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
COJIECFE_01157	2.61e-199	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
COJIECFE_01158	3.17e-149	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
COJIECFE_01159	1.89e-141	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
COJIECFE_01160	1.23e-187	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
COJIECFE_01161	5.41e-150	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
COJIECFE_01162	9.47e-115	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
COJIECFE_01163	4.38e-183	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
COJIECFE_01164	1.74e-211	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
COJIECFE_01165	1.15e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
COJIECFE_01166	5.62e-316	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
COJIECFE_01167	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
COJIECFE_01168	3.56e-116	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
COJIECFE_01169	3.7e-298	gshF	6.3.2.2	-	H	ko:K01919,ko:K16786,ko:K16787	ko00270,ko00480,ko01100,ko02010,map00270,map00480,map01100,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the glutamate--cysteine ligase type 1 family
COJIECFE_01170	3.12e-291	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
COJIECFE_01171	2.59e-277	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
COJIECFE_01173	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
COJIECFE_01174	5.28e-105	yebR	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
COJIECFE_01175	2.15e-137	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
COJIECFE_01176	4.02e-145	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
COJIECFE_01177	4e-105	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
COJIECFE_01178	2.6e-141	-	-	-	S	-	-	-	Protein of unknown function (DUF1648)
COJIECFE_01179	4.54e-59	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
COJIECFE_01180	0.0	gshAB	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
COJIECFE_01181	7.27e-303	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
COJIECFE_01182	1.57e-51	-	-	-	-	-	-	-	-
COJIECFE_01183	2.37e-107	uspA	-	-	T	-	-	-	universal stress protein
COJIECFE_01184	8.1e-261	bla2	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
COJIECFE_01185	4.7e-207	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
COJIECFE_01186	0.0	glpQ3	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
COJIECFE_01187	3.78e-272	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
COJIECFE_01188	7.55e-242	-	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
COJIECFE_01189	1.88e-226	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
COJIECFE_01190	3.34e-215	hicD3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
COJIECFE_01191	3.54e-190	metQ	-	-	M	ko:K02072,ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
COJIECFE_01192	2.1e-151	metI	-	-	U	ko:K02069,ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
COJIECFE_01193	4.52e-239	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
COJIECFE_01194	3.09e-62	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
COJIECFE_01195	2.51e-279	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
COJIECFE_01196	2.54e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
COJIECFE_01197	8.81e-57	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
COJIECFE_01198	1.44e-230	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
COJIECFE_01199	1.68e-132	-	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
COJIECFE_01200	2.4e-314	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
COJIECFE_01201	5.95e-74	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
COJIECFE_01202	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
COJIECFE_01203	9.14e-213	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
COJIECFE_01204	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
COJIECFE_01205	2.03e-118	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
COJIECFE_01206	1.27e-75	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
COJIECFE_01207	1.81e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
COJIECFE_01208	4.82e-165	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
COJIECFE_01209	4.12e-293	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
COJIECFE_01210	7.81e-148	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
COJIECFE_01211	2.49e-296	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
COJIECFE_01212	7.28e-243	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
COJIECFE_01213	3.44e-204	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
COJIECFE_01214	1.88e-251	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
COJIECFE_01215	5e-141	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
COJIECFE_01216	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
COJIECFE_01217	1.83e-175	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
COJIECFE_01218	4.95e-250	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
COJIECFE_01219	1.08e-244	ampC	-	-	V	-	-	-	Beta-lactamase
COJIECFE_01220	2.1e-41	-	-	-	-	-	-	-	-
COJIECFE_01221	1.9e-260	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
COJIECFE_01222	1.33e-77	-	-	-	-	-	-	-	-
COJIECFE_01223	5.37e-182	-	-	-	-	-	-	-	-
COJIECFE_01224	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
COJIECFE_01225	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
COJIECFE_01226	5.63e-89	yxeA	-	-	S	-	-	-	Protein of unknown function (DUF1093)
COJIECFE_01227	3.45e-181	icaB	-	-	G	-	-	-	Polysaccharide deacetylase
COJIECFE_01229	2.46e-58	-	-	-	S	-	-	-	Bacteriophage holin
COJIECFE_01230	4.55e-64	-	-	-	-	-	-	-	-
COJIECFE_01231	6.54e-234	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
COJIECFE_01234	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
COJIECFE_01235	4.07e-11	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
COJIECFE_01238	2.3e-122	-	-	-	S	-	-	-	Prophage endopeptidase tail
COJIECFE_01240	1.27e-217	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
COJIECFE_01241	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
COJIECFE_01242	6.84e-121	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
COJIECFE_01243	1.5e-227	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
COJIECFE_01244	1.89e-316	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
COJIECFE_01245	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
COJIECFE_01246	2.23e-200	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
COJIECFE_01247	1.01e-175	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
COJIECFE_01248	3.74e-206	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
COJIECFE_01250	2.97e-291	XK27_05470	-	-	E	-	-	-	Methionine synthase
COJIECFE_01251	7.05e-219	cpsY	-	-	K	-	-	-	Transcriptional regulator, LysR family
COJIECFE_01252	1.27e-222	-	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
COJIECFE_01253	3.53e-160	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
COJIECFE_01254	4.28e-253	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
COJIECFE_01255	1.53e-300	qacA	-	-	EGP	-	-	-	Major Facilitator
COJIECFE_01256	0.0	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
COJIECFE_01257	1.55e-46	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
COJIECFE_01258	3.29e-147	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
COJIECFE_01259	5.66e-207	XK27_03630	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
COJIECFE_01260	2.03e-189	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
COJIECFE_01261	1.8e-119	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
COJIECFE_01262	4.04e-242	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
COJIECFE_01263	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
COJIECFE_01264	6.46e-109	-	-	-	-	-	-	-	-
COJIECFE_01265	1.27e-291	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
COJIECFE_01266	1.39e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
COJIECFE_01267	1.06e-191	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
COJIECFE_01268	2.89e-291	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
COJIECFE_01269	5.57e-55	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
COJIECFE_01270	6.87e-313	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
COJIECFE_01271	1.98e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
COJIECFE_01272	1.27e-151	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
COJIECFE_01273	1.25e-39	-	-	-	M	-	-	-	Lysin motif
COJIECFE_01274	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
COJIECFE_01275	1.16e-243	-	-	-	S	-	-	-	Helix-turn-helix domain
COJIECFE_01276	2.24e-126	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
COJIECFE_01277	2.69e-167	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
COJIECFE_01278	1.3e-132	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
COJIECFE_01279	7.1e-176	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
COJIECFE_01280	3.99e-92	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
COJIECFE_01281	3.13e-211	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
COJIECFE_01282	7.94e-218	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
COJIECFE_01283	2.51e-98	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
COJIECFE_01284	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
COJIECFE_01285	8.69e-230	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
COJIECFE_01286	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
COJIECFE_01287	7.03e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
COJIECFE_01289	0.0	clpB	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
COJIECFE_01290	6.39e-299	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
COJIECFE_01291	1.09e-249	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
COJIECFE_01292	6.85e-164	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
COJIECFE_01293	1.75e-295	-	-	-	M	-	-	-	O-Antigen ligase
COJIECFE_01294	5.09e-165	drrB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
COJIECFE_01295	2.08e-213	drrA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
COJIECFE_01296	2.74e-112	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
COJIECFE_01297	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
COJIECFE_01298	2.27e-80	-	-	-	P	-	-	-	Rhodanese Homology Domain
COJIECFE_01299	6.11e-118	yetL	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
COJIECFE_01300	1.93e-266	-	-	-	-	-	-	-	-
COJIECFE_01301	4.8e-278	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
COJIECFE_01302	1.02e-230	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
COJIECFE_01303	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
COJIECFE_01304	2.57e-309	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
COJIECFE_01305	2.45e-179	-	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Major Facilitator Superfamily
COJIECFE_01306	5.59e-102	-	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Major Facilitator Superfamily
COJIECFE_01307	4.38e-102	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_01308	3.73e-264	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
COJIECFE_01309	0.0	nox	-	-	P	-	-	-	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
COJIECFE_01310	1.68e-176	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
COJIECFE_01311	1.4e-137	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
COJIECFE_01312	3.1e-92	spx2	-	-	P	ko:K16509	-	ko00000	ArsC family
COJIECFE_01313	6.34e-90	-	-	-	S	-	-	-	Protein of unknown function (DUF1722)
COJIECFE_01314	8.09e-146	-	-	-	GM	-	-	-	epimerase
COJIECFE_01315	0.0	-	-	-	S	-	-	-	Zinc finger, swim domain protein
COJIECFE_01316	1.76e-104	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_01317	5.58e-274	-	-	-	S	-	-	-	membrane
COJIECFE_01318	2.15e-07	-	-	-	K	-	-	-	transcriptional regulator
COJIECFE_01319	8.13e-90	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
COJIECFE_01320	1.82e-29	pts14C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_01323	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
COJIECFE_01324	2.65e-139	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
COJIECFE_01325	3.9e-105	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
COJIECFE_01326	9.2e-62	-	-	-	-	-	-	-	-
COJIECFE_01327	1.61e-211	nagE	2.7.1.193, 2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02802,ko:K02803,ko:K02804,ko:K20107,ko:K20108,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
COJIECFE_01328	1.76e-215	nagE	2.7.1.193, 2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02802,ko:K02803,ko:K02804,ko:K20107,ko:K20108,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
COJIECFE_01329	4.37e-241	panE1	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
COJIECFE_01330	3.45e-209	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
COJIECFE_01331	1.01e-293	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Homoserine dehydrogenase
COJIECFE_01332	6.08e-312	metY	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
COJIECFE_01333	1.53e-213	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
COJIECFE_01334	1.13e-225	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
COJIECFE_01335	7.03e-195	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
COJIECFE_01336	1.32e-178	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_01337	0.0	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
COJIECFE_01338	3.87e-202	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
COJIECFE_01339	1.01e-176	yceF	-	-	P	ko:K05794	-	ko00000	membrane
COJIECFE_01340	4.99e-125	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
COJIECFE_01341	4.48e-257	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
COJIECFE_01342	1.07e-68	hisE	3.6.1.31	-	E	ko:K01523	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	phosphoribosyl-ATP diphosphatase activity
COJIECFE_01343	6.12e-78	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
COJIECFE_01344	1.81e-172	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
COJIECFE_01345	6.84e-166	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
COJIECFE_01346	2.23e-142	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
COJIECFE_01347	2.46e-139	hisB	4.2.1.19	-	E	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	imidazoleglycerol-phosphate dehydratase
COJIECFE_01348	1.92e-299	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COJIECFE_01349	1.69e-151	hisG	2.4.2.17	-	F	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
COJIECFE_01350	4.44e-273	hisZ	-	-	E	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
COJIECFE_01351	3.2e-208	hisK	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidinol phosphate phosphatase, HisJ
COJIECFE_01352	2.15e-282	ysaA	-	-	V	-	-	-	RDD family
COJIECFE_01353	7.28e-213	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
COJIECFE_01354	6.7e-74	-	-	-	S	-	-	-	Domain of unknown function (DU1801)
COJIECFE_01355	7.85e-117	rmeB	-	-	K	-	-	-	transcriptional regulator, MerR family
COJIECFE_01356	2.49e-190	-	-	-	GM	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
COJIECFE_01357	4.54e-126	-	-	-	J	-	-	-	glyoxalase III activity
COJIECFE_01358	1.69e-255	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
COJIECFE_01359	1.45e-46	-	-	-	-	-	-	-	-
COJIECFE_01360	3.62e-143	-	-	-	S	-	-	-	Protein of unknown function (DUF1211)
COJIECFE_01361	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
COJIECFE_01362	3.33e-221	-	-	-	M	-	-	-	domain protein
COJIECFE_01363	2.34e-139	-	-	-	M	-	-	-	domain protein
COJIECFE_01364	3e-98	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
COJIECFE_01365	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
COJIECFE_01366	0.0	glpQ4	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
COJIECFE_01367	4.01e-236	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
COJIECFE_01368	2.14e-183	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
COJIECFE_01369	7.51e-248	-	-	-	S	-	-	-	domain, Protein
COJIECFE_01370	1.73e-216	-	-	-	S	-	-	-	Polyphosphate kinase 2 (PPK2)
COJIECFE_01371	2.57e-128	-	-	-	C	-	-	-	Nitroreductase family
COJIECFE_01372	1.23e-228	iunH1	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
COJIECFE_01373	3.45e-209	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
COJIECFE_01374	2.2e-157	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
COJIECFE_01375	1.48e-201	ccpB	-	-	K	-	-	-	lacI family
COJIECFE_01376	4.16e-150	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
COJIECFE_01377	2.48e-227	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
COJIECFE_01378	3e-251	yhhX	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
COJIECFE_01379	0.0	nhaP2	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
COJIECFE_01380	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
COJIECFE_01381	9.38e-139	pncA	-	-	Q	-	-	-	Isochorismatase family
COJIECFE_01382	2.66e-172	-	-	-	-	-	-	-	-
COJIECFE_01383	5e-162	skfE	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
COJIECFE_01384	8.34e-86	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
COJIECFE_01385	7.2e-61	-	-	-	S	-	-	-	Enterocin A Immunity
COJIECFE_01386	2.67e-222	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
COJIECFE_01387	0.0	pepF2	-	-	E	-	-	-	Oligopeptidase F
COJIECFE_01388	1.4e-95	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_01389	1.86e-210	-	-	-	-	-	-	-	-
COJIECFE_01391	1.75e-75	-	-	-	-	-	-	-	-
COJIECFE_01392	4.83e-64	-	-	-	-	-	-	-	-
COJIECFE_01393	0.0	spxB	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
COJIECFE_01394	1.8e-29	-	-	-	-	-	-	-	-
COJIECFE_01395	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
COJIECFE_01396	1.2e-51	-	-	-	-	-	-	-	-
COJIECFE_01397	9.81e-73	repA	-	-	S	-	-	-	Replication initiator protein A
COJIECFE_01398	2.78e-231	-	-	-	U	-	-	-	Relaxase/Mobilisation nuclease domain
COJIECFE_01399	1.5e-68	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
COJIECFE_01400	3.03e-49	-	-	-	K	-	-	-	sequence-specific DNA binding
COJIECFE_01401	2.08e-60	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
COJIECFE_01402	0.0	-	-	-	S	-	-	-	Phage Terminase
COJIECFE_01403	7.82e-34	-	-	-	S	-	-	-	Protein of unknown function (DUF1056)
COJIECFE_01404	1.47e-285	-	-	-	S	-	-	-	Phage portal protein
COJIECFE_01405	5.75e-164	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
COJIECFE_01406	7.67e-39	-	-	-	S	-	-	-	Phage capsid family
COJIECFE_01407	7.51e-218	-	-	-	S	-	-	-	peptidase activity
COJIECFE_01408	2.28e-66	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
COJIECFE_01409	2.81e-31	-	-	-	S	-	-	-	Phage head-tail joining protein
COJIECFE_01410	4.4e-49	-	-	-	-	-	-	-	-
COJIECFE_01411	3.57e-33	-	-	-	-	-	-	-	-
COJIECFE_01412	3.67e-91	-	-	-	S	-	-	-	Phage tail tube protein
COJIECFE_01414	1.12e-05	-	-	-	-	-	-	-	-
COJIECFE_01415	0.0	-	-	-	S	-	-	-	peptidoglycan catabolic process
COJIECFE_01416	0.0	-	-	-	S	-	-	-	Phage tail protein
COJIECFE_01417	0.0	-	-	-	S	-	-	-	Phage minor structural protein
COJIECFE_01421	2.5e-100	-	-	-	-	-	-	-	-
COJIECFE_01422	1.97e-32	-	-	-	-	-	-	-	-
COJIECFE_01423	4.05e-263	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
COJIECFE_01424	3.19e-50	-	-	-	S	-	-	-	Haemolysin XhlA
COJIECFE_01425	4.55e-56	-	-	-	S	-	-	-	Bacteriophage holin
COJIECFE_01427	1.96e-293	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Cell cycle protein
COJIECFE_01428	0.0	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
COJIECFE_01429	3.14e-183	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
COJIECFE_01430	1.12e-33	ywtF_2	-	-	K	-	-	-	Cell envelope-related transcriptional attenuator domain
COJIECFE_01431	9.33e-234	ywtF_2	-	-	K	-	-	-	Cell envelope-related transcriptional attenuator domain
COJIECFE_01432	2.19e-131	-	-	-	L	-	-	-	Helix-turn-helix domain
COJIECFE_01433	1.14e-226	csbB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Glycosyltransferase like family 2
COJIECFE_01434	3.81e-87	-	-	-	-	-	-	-	-
COJIECFE_01435	5.61e-98	-	-	-	-	-	-	-	-
COJIECFE_01436	1.56e-276	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
COJIECFE_01437	7.8e-123	-	-	-	-	-	-	-	-
COJIECFE_01438	7.22e-149	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
COJIECFE_01439	7.68e-48	ynzC	-	-	S	-	-	-	UPF0291 protein
COJIECFE_01440	3.96e-44	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
COJIECFE_01441	8.8e-155	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
COJIECFE_01442	2.11e-171	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
COJIECFE_01443	6.63e-63	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
COJIECFE_01444	1.92e-239	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
COJIECFE_01445	2.92e-172	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
COJIECFE_01446	6.33e-185	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
COJIECFE_01447	1.88e-194	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
COJIECFE_01448	3.01e-165	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
COJIECFE_01449	9.83e-113	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
COJIECFE_01450	3.17e-190	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
COJIECFE_01451	1.13e-175	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
COJIECFE_01452	4.64e-294	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
COJIECFE_01453	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
COJIECFE_01454	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
COJIECFE_01455	9.74e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
COJIECFE_01456	4.46e-275	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
COJIECFE_01457	2.95e-65	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
COJIECFE_01458	3.28e-63	ylxQ	-	-	J	-	-	-	ribosomal protein
COJIECFE_01459	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
COJIECFE_01460	3.04e-71	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
COJIECFE_01461	0.0	-	-	-	G	-	-	-	Major Facilitator
COJIECFE_01462	3.67e-275	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
COJIECFE_01463	6.65e-121	-	-	-	-	-	-	-	-
COJIECFE_01464	1.24e-297	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
COJIECFE_01465	1.47e-246	tyrA	1.3.1.12	-	E	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	prephenate dehydrogenase
COJIECFE_01466	2.41e-113	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COJIECFE_01467	1.8e-220	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
COJIECFE_01468	1.53e-241	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
COJIECFE_01469	6.88e-169	budA	4.1.1.5	-	Q	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Alpha-acetolactate decarboxylase
COJIECFE_01470	4.42e-248	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
COJIECFE_01471	4.52e-111	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
COJIECFE_01472	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
COJIECFE_01473	2.54e-266	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
COJIECFE_01474	2.43e-265	pbpX2	-	-	V	-	-	-	Beta-lactamase
COJIECFE_01475	8.59e-27	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
COJIECFE_01476	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
COJIECFE_01477	9.38e-297	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
COJIECFE_01478	5.75e-47	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
COJIECFE_01479	1.68e-312	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
COJIECFE_01480	5.8e-183	-	-	-	M	-	-	-	domain protein
COJIECFE_01481	2.94e-286	-	-	-	M	-	-	-	domain protein
COJIECFE_01483	1.03e-201	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
COJIECFE_01484	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
COJIECFE_01485	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
COJIECFE_01486	1.08e-101	yiaC	-	-	K	ko:K03826	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
COJIECFE_01487	1.19e-277	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
COJIECFE_01488	5.06e-259	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
COJIECFE_01489	1.11e-146	pgm1	-	-	G	-	-	-	phosphoglycerate mutase
COJIECFE_01490	2.49e-229	yghZ	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
COJIECFE_01491	6.33e-46	-	-	-	-	-	-	-	-
COJIECFE_01492	1.35e-78	-	-	-	S	-	-	-	Domain of unknown function (DU1801)
COJIECFE_01493	4.56e-210	fbpA	-	-	K	-	-	-	Domain of unknown function (DUF814)
COJIECFE_01494	3.03e-277	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
COJIECFE_01495	3.81e-18	-	-	-	-	-	-	-	-
COJIECFE_01496	3.18e-77	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
COJIECFE_01497	5.66e-74	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
COJIECFE_01498	0.0	-	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
COJIECFE_01499	1.75e-149	ykoC	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
COJIECFE_01500	0.0	-	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
COJIECFE_01501	1.43e-131	-	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC transporter permease
COJIECFE_01502	2.28e-114	gpo	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
COJIECFE_01503	5.3e-202	dkgB	-	-	S	-	-	-	reductase
COJIECFE_01504	1.28e-102	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
COJIECFE_01505	4.89e-91	-	-	-	-	-	-	-	-
COJIECFE_01506	3.16e-170	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
COJIECFE_01507	9.01e-221	-	-	-	P	-	-	-	Major Facilitator Superfamily
COJIECFE_01508	6.46e-282	-	-	-	C	-	-	-	FAD dependent oxidoreductase
COJIECFE_01509	2.46e-126	-	-	-	K	-	-	-	Helix-turn-helix domain
COJIECFE_01510	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
COJIECFE_01511	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
COJIECFE_01512	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
COJIECFE_01513	5.33e-103	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_01514	1.06e-281	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
COJIECFE_01515	2.84e-110	-	-	-	-	-	-	-	-
COJIECFE_01516	1.96e-75	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
COJIECFE_01517	5.92e-67	-	-	-	-	-	-	-	-
COJIECFE_01518	1.22e-125	-	-	-	-	-	-	-	-
COJIECFE_01519	2.98e-90	-	-	-	-	-	-	-	-
COJIECFE_01520	1.2e-106	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
COJIECFE_01521	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
COJIECFE_01522	2.21e-127	-	-	-	S	ko:K19784	-	ko00000	NADPH-dependent FMN reductase
COJIECFE_01523	1.89e-159	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
COJIECFE_01524	2.37e-294	pts3C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_01525	6.14e-53	-	-	-	-	-	-	-	-
COJIECFE_01526	1.01e-23	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
COJIECFE_01527	4.67e-215	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
COJIECFE_01528	5.16e-271	dho	3.5.2.3	-	S	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Amidohydrolase family
COJIECFE_01529	2.06e-258	selA	2.9.1.1	-	H	ko:K01042	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko01000	L-seryl-tRNA selenium transferase
COJIECFE_01530	1.22e-166	-	4.1.2.14	-	S	ko:K17463	ko00030,ko01100,ko01120,map00030,map01100,map01120	ko00000,ko00001,ko00002,ko01000	KDGP aldolase
COJIECFE_01531	7.87e-243	-	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
COJIECFE_01532	2.13e-124	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Bacterial transferase hexapeptide (six repeats)
COJIECFE_01533	1.17e-267	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
COJIECFE_01534	7.54e-211	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
COJIECFE_01535	6.72e-203	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
COJIECFE_01536	1.27e-181	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
COJIECFE_01537	7.55e-58	-	-	-	S	-	-	-	Protein of unknown function (DUF2089)
COJIECFE_01538	2.21e-56	-	-	-	-	-	-	-	-
COJIECFE_01539	1.38e-165	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
COJIECFE_01540	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
COJIECFE_01541	0.0	pts4ABC	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
COJIECFE_01542	0.0	pts5ABC	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
COJIECFE_01543	1.83e-185	-	-	-	-	-	-	-	-
COJIECFE_01544	1.21e-94	tagD	2.7.7.15, 2.7.7.39	-	IM	ko:K00968,ko:K00980	ko00440,ko00564,ko01100,ko05231,map00440,map00564,map01100,map05231	ko00000,ko00001,ko00002,ko01000	Glycerol-3-phosphate cytidylyltransferase
COJIECFE_01545	8.12e-306	tagB	2.7.8.12, 2.7.8.45	-	M	ko:K09809,ko:K21591	-	ko00000,ko01000	glycerophosphotransferase
COJIECFE_01546	0.0	tagF2	2.7.8.12	-	H	ko:K09809	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
COJIECFE_01547	3.37e-129	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
COJIECFE_01548	2.73e-92	-	-	-	-	-	-	-	-
COJIECFE_01549	6.27e-316	-	-	-	EGP	-	-	-	Major Facilitator
COJIECFE_01550	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
COJIECFE_01551	1.85e-49	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
COJIECFE_01552	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
COJIECFE_01554	2.11e-248	-	-	-	C	-	-	-	Aldo/keto reductase family
COJIECFE_01555	1.07e-131	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
COJIECFE_01556	2.33e-283	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
COJIECFE_01557	5.29e-131	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
COJIECFE_01558	2.31e-79	-	-	-	-	-	-	-	-
COJIECFE_01559	1.02e-161	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
COJIECFE_01560	2.09e-124	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
COJIECFE_01561	2.1e-99	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
COJIECFE_01562	1.28e-45	-	-	-	-	-	-	-	-
COJIECFE_01563	6.82e-193	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
COJIECFE_01564	1.66e-247	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
COJIECFE_01565	1.52e-135	-	-	-	GM	-	-	-	NAD(P)H-binding
COJIECFE_01566	1.51e-200	-	-	-	K	-	-	-	LysR substrate binding domain
COJIECFE_01567	6.09e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF4440)
COJIECFE_01568	4.14e-110	pgm8	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
COJIECFE_01569	1.02e-13	pgm8	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
COJIECFE_01570	2.81e-64	-	-	-	-	-	-	-	-
COJIECFE_01571	9.76e-50	-	-	-	-	-	-	-	-
COJIECFE_01572	1.04e-110	yvbK	-	-	K	-	-	-	GNAT family
COJIECFE_01573	4.86e-111	-	-	-	-	-	-	-	-
COJIECFE_01575	1.03e-150	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
COJIECFE_01576	1.84e-140	thgA3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
COJIECFE_01577	2.93e-151	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
COJIECFE_01579	1.74e-156	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_01580	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
COJIECFE_01581	1.46e-299	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
COJIECFE_01582	5.19e-103	-	-	-	K	-	-	-	transcriptional regulator, MerR family
COJIECFE_01583	1.37e-99	yphH	-	-	S	-	-	-	Cupin domain
COJIECFE_01584	4.72e-72	cmd	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
COJIECFE_01585	6.27e-166	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
COJIECFE_01586	7.88e-269	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
COJIECFE_01587	9.97e-214	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_01588	1.6e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	Methyltransferase
COJIECFE_01589	1.92e-86	-	-	-	M	-	-	-	LysM domain
COJIECFE_01591	0.0	tagE6	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
COJIECFE_01592	0.0	tagE5	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Poly(Glycerol-phosphate) alpha-glucosyltransferase
COJIECFE_01593	1.19e-193	rlrG	-	-	K	ko:K21900	-	ko00000,ko03000	Transcriptional regulator
COJIECFE_01594	4.38e-222	-	-	-	S	-	-	-	Conserved hypothetical protein 698
COJIECFE_01595	7.96e-127	ydaF	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
COJIECFE_01596	2.33e-103	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
COJIECFE_01597	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
COJIECFE_01598	3.85e-158	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
COJIECFE_01599	5.03e-260	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
COJIECFE_01600	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Fumarase C C-terminus
COJIECFE_01601	1.17e-196	mleP3	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
COJIECFE_01602	9.01e-155	-	-	-	S	-	-	-	Membrane
COJIECFE_01603	8.02e-258	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
COJIECFE_01604	1.45e-126	ywjB	-	-	H	-	-	-	RibD C-terminal domain
COJIECFE_01605	8.13e-238	iunH3	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Inosine-uridine preferring nucleoside hydrolase
COJIECFE_01606	2.27e-116	-	-	-	T	ko:K16923	-	ko00000,ko00002,ko02000	phosphorelay sensor kinase activity
COJIECFE_01607	7.14e-157	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_01608	4.88e-240	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
COJIECFE_01609	1.86e-123	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
COJIECFE_01610	3.41e-295	gltT	-	-	U	ko:K03309,ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
COJIECFE_01611	3.82e-188	-	-	-	KT	-	-	-	helix_turn_helix, mercury resistance
COJIECFE_01612	1.37e-149	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
COJIECFE_01613	1.04e-120	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
COJIECFE_01614	1.57e-184	-	-	-	S	-	-	-	Peptidase_C39 like family
COJIECFE_01615	1.08e-229	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
COJIECFE_01616	1.27e-143	-	-	-	-	-	-	-	-
COJIECFE_01617	3.47e-306	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
COJIECFE_01618	8.02e-110	-	-	-	S	-	-	-	Pfam:DUF3816
COJIECFE_01620	4.62e-44	-	-	-	-	-	-	-	-
COJIECFE_01622	8.97e-49	-	-	-	-	-	-	-	-
COJIECFE_01624	2.47e-48	-	-	-	S	-	-	-	hydrolase activity, acting on ester bonds
COJIECFE_01625	2.18e-163	-	-	-	S	ko:K06919	-	ko00000	Virulence-associated protein E
COJIECFE_01626	2.71e-96	-	-	-	S	-	-	-	Bifunctional DNA primase/polymerase, N-terminal
COJIECFE_01627	3.18e-28	-	-	-	-	-	-	-	-
COJIECFE_01628	1.89e-91	-	-	-	L	-	-	-	AAA domain
COJIECFE_01629	1.22e-195	-	-	-	S	-	-	-	helicase activity
COJIECFE_01630	2.59e-52	-	-	-	S	-	-	-	Siphovirus Gp157
COJIECFE_01637	2.52e-35	-	-	-	S	-	-	-	Domain of unknown function (DUF771)
COJIECFE_01638	1.53e-11	-	-	-	-	-	-	-	-
COJIECFE_01639	5.72e-27	-	-	-	-	-	-	-	-
COJIECFE_01644	1.39e-296	yeeA	-	-	V	-	-	-	Type II restriction enzyme, methylase subunits
COJIECFE_01645	4.19e-118	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
COJIECFE_01647	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
COJIECFE_01648	7.12e-62	-	-	-	-	-	-	-	-
COJIECFE_01649	8.82e-119	-	-	-	-	-	-	-	-
COJIECFE_01650	6.32e-111	ohrR	-	-	K	ko:K18906	-	ko00000,ko00002,ko01504,ko03000	helix_turn_helix multiple antibiotic resistance protein
COJIECFE_01651	1.23e-145	XK27_07085	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
COJIECFE_01652	4.56e-78	-	-	-	-	-	-	-	-
COJIECFE_01653	3.63e-72	-	-	-	-	-	-	-	-
COJIECFE_01654	9.01e-179	agrA	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
COJIECFE_01655	8.83e-285	pltK	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
COJIECFE_01656	7.83e-140	-	-	-	-	-	-	-	-
COJIECFE_01657	1.14e-190	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
COJIECFE_01658	9.36e-205	ydeD	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
COJIECFE_01659	1.64e-151	-	-	-	GM	-	-	-	NAD(P)H-binding
COJIECFE_01660	3.01e-84	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
COJIECFE_01661	6.96e-198	mrsA1	1.8.4.11	-	O	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
COJIECFE_01663	2.57e-226	-	-	-	K	ko:K01990	-	ko00000,ko00002,ko02000	LytTr DNA-binding domain
COJIECFE_01664	3.06e-201	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
COJIECFE_01665	1.16e-160	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
COJIECFE_01667	1.48e-315	XK27_06930	-	-	V	ko:K01421	-	ko00000	domain protein
COJIECFE_01668	3.55e-72	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
COJIECFE_01669	2.07e-155	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
COJIECFE_01670	5.45e-162	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
COJIECFE_01671	0.0	ugpB	-	-	G	ko:K05813	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
COJIECFE_01672	6.16e-193	ugpE	-	-	G	ko:K05815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
COJIECFE_01673	5.35e-98	ugpA	-	-	U	ko:K02025,ko:K05814	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
COJIECFE_01674	3.25e-51	ugpA	-	-	U	ko:K02025,ko:K05814	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
COJIECFE_01675	1.05e-31	ugpA	-	-	U	ko:K02025,ko:K05814	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
COJIECFE_01676	1.24e-259	ugpC	3.6.3.20	-	E	ko:K05816,ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the ABC transporter superfamily
COJIECFE_01677	2.16e-109	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
COJIECFE_01678	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
COJIECFE_01679	8.69e-193	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
COJIECFE_01680	5.04e-176	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
COJIECFE_01681	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
COJIECFE_01682	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
COJIECFE_01683	2.95e-160	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
COJIECFE_01684	3.03e-122	mraW1	-	-	J	-	-	-	Putative rRNA methylase
COJIECFE_01685	9.32e-40	-	-	-	-	-	-	-	-
COJIECFE_01686	0.0	tagE3	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
COJIECFE_01687	0.0	tagE2	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
COJIECFE_01688	0.0	-	-	-	S	-	-	-	Pfam Methyltransferase
COJIECFE_01689	5.18e-145	-	-	-	N	-	-	-	Cell shape-determining protein MreB
COJIECFE_01690	6.7e-141	-	-	-	N	-	-	-	Cell shape-determining protein MreB
COJIECFE_01691	1.52e-67	-	-	-	-	-	-	-	-
COJIECFE_01692	3.93e-59	-	-	-	-	-	-	-	-
COJIECFE_01693	0.0	gabT	2.6.1.19, 5.1.1.21	-	E	ko:K00823,ko:K20708	ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
COJIECFE_01694	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
COJIECFE_01695	3.86e-192	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
COJIECFE_01696	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
COJIECFE_01697	2.78e-156	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
COJIECFE_01698	0.0	malT	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
COJIECFE_01699	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
COJIECFE_01700	3.36e-247	galM2	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
COJIECFE_01701	8.61e-251	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
COJIECFE_01702	1.03e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
COJIECFE_01703	1.1e-230	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
COJIECFE_01704	2.1e-217	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
COJIECFE_01705	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
COJIECFE_01706	1.03e-106	ypmB	-	-	S	-	-	-	protein conserved in bacteria
COJIECFE_01707	3.1e-289	aspB	2.6.1.1, 2.6.1.14	-	E	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
COJIECFE_01708	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
COJIECFE_01709	3.25e-165	dnaD	-	-	L	ko:K02086	-	ko00000	Replication initiation and membrane attachment
COJIECFE_01711	3.29e-238	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
COJIECFE_01712	2.45e-142	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
COJIECFE_01713	2.62e-202	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
COJIECFE_01714	1.03e-106	-	-	-	T	-	-	-	Universal stress protein family
COJIECFE_01715	5.48e-140	ftpA	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
COJIECFE_01716	1.02e-216	ftpA	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
COJIECFE_01717	1.9e-232	ftpB	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
COJIECFE_01718	3.27e-228	phnT	3.6.3.30	-	P	ko:K02010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
COJIECFE_01719	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
COJIECFE_01720	3.6e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
COJIECFE_01721	2.12e-142	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
COJIECFE_01722	9.98e-75	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
COJIECFE_01724	1.44e-282	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
COJIECFE_01725	1.26e-61	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
COJIECFE_01726	3.65e-308	-	-	-	P	-	-	-	Major Facilitator Superfamily
COJIECFE_01727	4.17e-186	yitV	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
COJIECFE_01728	1.48e-83	-	-	-	S	-	-	-	SnoaL-like domain
COJIECFE_01729	9.63e-307	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
COJIECFE_01730	3.46e-267	mccF	-	-	V	-	-	-	LD-carboxypeptidase
COJIECFE_01731	2.51e-71	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
COJIECFE_01732	1.23e-311	-	-	-	M	ko:K07273	-	ko00000	hydrolase, family 25
COJIECFE_01733	1.38e-232	-	-	-	V	-	-	-	LD-carboxypeptidase
COJIECFE_01734	4.35e-159	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
COJIECFE_01735	1.9e-156	-	-	-	P	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
COJIECFE_01736	6.79e-249	-	-	-	-	-	-	-	-
COJIECFE_01737	1.23e-185	-	-	-	S	-	-	-	hydrolase activity, acting on ester bonds
COJIECFE_01738	8.53e-268	yurR	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	FAD dependent oxidoreductase
COJIECFE_01739	3.28e-87	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
COJIECFE_01740	5.04e-82	esbA	-	-	S	-	-	-	Family of unknown function (DUF5322)
COJIECFE_01741	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
COJIECFE_01742	1.65e-97	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
COJIECFE_01743	1.61e-223	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
COJIECFE_01744	1.9e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
COJIECFE_01745	1.71e-263	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
COJIECFE_01746	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
COJIECFE_01747	8.2e-145	-	-	-	G	-	-	-	Phosphoglycerate mutase family
COJIECFE_01748	7.75e-93	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
COJIECFE_01751	9.81e-27	-	-	-	-	-	-	-	-
COJIECFE_01752	8.15e-125	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_01753	1.55e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
COJIECFE_01754	7.97e-71	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
COJIECFE_01755	2.33e-61	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
COJIECFE_01756	5.79e-247	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
COJIECFE_01757	1.43e-129	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
COJIECFE_01758	1.7e-96	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
COJIECFE_01759	2.82e-91	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
COJIECFE_01760	4.82e-194	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COJIECFE_01761	2.81e-313	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
COJIECFE_01762	7.55e-44	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
COJIECFE_01763	1.16e-200	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
COJIECFE_01764	4.49e-192	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
COJIECFE_01765	5.28e-100	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
COJIECFE_01766	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
COJIECFE_01767	4.51e-284	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_01768	7.11e-135	opuCB	-	-	E	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
COJIECFE_01769	4.44e-223	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
COJIECFE_01770	1.36e-136	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
COJIECFE_01771	8.28e-73	-	-	-	-	-	-	-	-
COJIECFE_01772	6.96e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
COJIECFE_01773	3.93e-41	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
COJIECFE_01774	3.14e-277	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
COJIECFE_01775	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
COJIECFE_01776	1.01e-222	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
COJIECFE_01777	0.0	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
COJIECFE_01778	1.62e-173	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
COJIECFE_01779	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
COJIECFE_01780	1.21e-209	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
COJIECFE_01781	4.49e-151	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
COJIECFE_01782	1.84e-160	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
COJIECFE_01783	1.61e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
COJIECFE_01784	7.09e-76	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
COJIECFE_01785	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
COJIECFE_01786	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
COJIECFE_01787	2.54e-243	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
COJIECFE_01788	3.33e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
COJIECFE_01789	4.49e-167	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
COJIECFE_01790	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
COJIECFE_01791	8.97e-297	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
COJIECFE_01792	1.46e-77	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
COJIECFE_01793	8.95e-299	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
COJIECFE_01794	1.6e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
COJIECFE_01795	9.99e-53	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
COJIECFE_01796	6.42e-123	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
COJIECFE_01797	1.57e-179	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
COJIECFE_01798	3.15e-78	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
COJIECFE_01799	3.2e-70	-	-	-	-	-	-	-	-
COJIECFE_01800	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
COJIECFE_01801	4.49e-112	-	-	-	-	-	-	-	-
COJIECFE_01802	1.32e-77	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_01804	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
COJIECFE_01805	1.56e-46	ykuJ	-	-	S	-	-	-	Protein of unknown function (DUF1797)
COJIECFE_01806	5.8e-291	araT	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
COJIECFE_01807	1.09e-290	dacA2	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
COJIECFE_01808	2.16e-241	mprF	-	-	I	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
COJIECFE_01809	8.31e-254	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
COJIECFE_01810	1.41e-285	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
COJIECFE_01811	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
COJIECFE_01812	1.24e-52	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
COJIECFE_01813	5.6e-41	-	-	-	-	-	-	-	-
COJIECFE_01814	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
COJIECFE_01815	2.92e-131	-	-	-	L	-	-	-	Integrase
COJIECFE_01816	3.4e-85	-	-	-	K	-	-	-	Winged helix DNA-binding domain
COJIECFE_01817	5.43e-229	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
COJIECFE_01818	4.86e-258	oppD	-	-	P	ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
COJIECFE_01819	3.59e-241	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
COJIECFE_01820	3.44e-210	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
COJIECFE_01821	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
COJIECFE_01822	3.85e-76	ywjH	-	-	S	-	-	-	Protein of unknown function (DUF1634)
COJIECFE_01823	1.01e-172	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
COJIECFE_01824	1.36e-208	lysR5	-	-	K	-	-	-	LysR substrate binding domain
COJIECFE_01825	3.51e-251	-	-	-	M	-	-	-	MucBP domain
COJIECFE_01826	0.0	-	-	-	-	-	-	-	-
COJIECFE_01827	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
COJIECFE_01828	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
COJIECFE_01829	4.08e-217	gntZ	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
COJIECFE_01830	1.9e-289	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
COJIECFE_01831	6.03e-279	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
COJIECFE_01832	6.04e-94	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
COJIECFE_01833	1.13e-257	yueF	-	-	S	-	-	-	AI-2E family transporter
COJIECFE_01834	1.73e-178	hdhL	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
COJIECFE_01835	5.09e-51	-	-	-	S	-	-	-	Antitoxin component of a toxin-antitoxin (TA) module
COJIECFE_01836	8.01e-64	-	-	-	K	-	-	-	sequence-specific DNA binding
COJIECFE_01837	1.94e-170	lytE	-	-	M	-	-	-	NlpC/P60 family
COJIECFE_01838	6.62e-138	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
COJIECFE_01839	1.01e-181	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
COJIECFE_01840	2.82e-170	-	-	-	-	-	-	-	-
COJIECFE_01841	8.02e-130	-	-	-	K	-	-	-	DNA-templated transcription, initiation
COJIECFE_01842	8.39e-38	-	-	-	-	-	-	-	-
COJIECFE_01843	1.95e-41	-	-	-	-	-	-	-	-
COJIECFE_01844	1.04e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
COJIECFE_01845	9.02e-70	-	-	-	-	-	-	-	-
COJIECFE_01846	4.83e-151	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
COJIECFE_01848	0.0	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
COJIECFE_01849	2.18e-96	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
COJIECFE_01850	0.0	-	-	-	M	-	-	-	domain protein
COJIECFE_01851	4.37e-34	-	-	-	-	-	-	-	-
COJIECFE_01852	1.48e-171	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
COJIECFE_01853	2.35e-231	-	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
COJIECFE_01854	0.0	-	-	-	I	-	-	-	acetylesterase activity
COJIECFE_01855	1.8e-297	-	-	-	M	-	-	-	Collagen binding domain
COJIECFE_01856	9.65e-172	yicL	-	-	EG	-	-	-	EamA-like transporter family
COJIECFE_01857	1.02e-164	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
COJIECFE_01858	2.27e-189	-	4.1.1.52	-	S	ko:K22213	-	ko00000,ko01000	Amidohydrolase
COJIECFE_01859	1.98e-142	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
COJIECFE_01860	1.85e-51	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
COJIECFE_01861	4.54e-208	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
COJIECFE_01862	0.0	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
COJIECFE_01863	4.02e-116	-	-	-	-	-	-	-	-
COJIECFE_01864	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
COJIECFE_01865	7.39e-121	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
COJIECFE_01866	5.85e-204	ccpB	-	-	K	-	-	-	lacI family
COJIECFE_01867	2.21e-154	yceE	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
COJIECFE_01868	9.44e-153	ydgI3	-	-	C	-	-	-	Nitroreductase family
COJIECFE_01869	0.0	nagE	2.7.1.193, 2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02802,ko:K02803,ko:K02804,ko:K20107,ko:K20108,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
COJIECFE_01870	4.21e-150	-	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
COJIECFE_01871	1.01e-198	WQ51_06230	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
COJIECFE_01872	5.98e-217	XK27_00670	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
COJIECFE_01873	0.0	-	-	-	-	-	-	-	-
COJIECFE_01874	9.55e-243	-	-	-	S	-	-	-	Cell surface protein
COJIECFE_01875	4.24e-136	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
COJIECFE_01876	5.06e-82	acuB	-	-	S	ko:K04767	-	ko00000	Domain in cystathionine beta-synthase and other proteins.
COJIECFE_01877	1.09e-42	acuB	-	-	S	ko:K04767	-	ko00000	Domain in cystathionine beta-synthase and other proteins.
COJIECFE_01878	2.78e-158	livF	-	-	E	ko:K01996	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
COJIECFE_01879	5.21e-180	livG	-	-	E	ko:K01995	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid ATP-binding cassette transporter
COJIECFE_01880	7.65e-192	livM	-	-	E	ko:K01997,ko:K01998	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport system / permease component
COJIECFE_01881	1.61e-195	livH	-	-	U	ko:K01997	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport system / permease component
COJIECFE_01882	8.54e-269	livJ	-	-	E	ko:K01999	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Receptor family ligand binding region
COJIECFE_01884	1.15e-43	-	-	-	-	-	-	-	-
COJIECFE_01885	1.62e-166	zmp3	-	-	O	-	-	-	Zinc-dependent metalloprotease
COJIECFE_01886	2.88e-106	gtcA3	-	-	S	-	-	-	GtrA-like protein
COJIECFE_01887	3.35e-157	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
COJIECFE_01888	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
COJIECFE_01889	1.18e-94	usp2	-	-	T	-	-	-	Belongs to the universal stress protein A family
COJIECFE_01890	7.03e-62	-	-	-	-	-	-	-	-
COJIECFE_01891	1.81e-150	-	-	-	S	-	-	-	SNARE associated Golgi protein
COJIECFE_01892	8.58e-65	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
COJIECFE_01893	7.89e-124	-	-	-	P	-	-	-	Cadmium resistance transporter
COJIECFE_01894	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_01895	8.01e-237	-	-	-	P	-	-	-	Concanavalin A-like lectin/glucanases superfamily
COJIECFE_01896	0.0	-	-	-	P	-	-	-	Concanavalin A-like lectin/glucanases superfamily
COJIECFE_01897	3.6e-211	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
COJIECFE_01898	5.58e-87	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
COJIECFE_01899	5.28e-100	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
COJIECFE_01900	6.05e-108	tspO	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	TspO/MBR family
COJIECFE_01901	2.05e-55	-	-	-	-	-	-	-	-
COJIECFE_01902	5.93e-60	ycnE	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
COJIECFE_01903	9.96e-147	-	1.14.99.53	AA10	S	ko:K21713	-	ko00000,ko01000	Lytic polysaccharide mono-oxygenase, cellulose-degrading
COJIECFE_01904	1.05e-41	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
COJIECFE_01905	6.57e-274	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
COJIECFE_01906	2.02e-39	-	-	-	-	-	-	-	-
COJIECFE_01907	1.48e-71	-	-	-	-	-	-	-	-
COJIECFE_01908	6.56e-193	-	-	-	O	-	-	-	Band 7 protein
COJIECFE_01909	0.0	-	-	-	EGP	-	-	-	Major Facilitator
COJIECFE_01910	1.22e-120	-	-	-	K	-	-	-	transcriptional regulator
COJIECFE_01911	2.18e-246	rsgA_2	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
COJIECFE_01912	4.94e-114	ykhA	-	-	I	-	-	-	Thioesterase superfamily
COJIECFE_01913	4.35e-206	-	-	-	K	-	-	-	LysR substrate binding domain
COJIECFE_01914	7.34e-162	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
COJIECFE_01915	2.9e-128	-	-	-	H	ko:K06133	ko00770,map00770	ko00000,ko00001,ko01000	Belongs to the P-Pant transferase superfamily
COJIECFE_01916	5.4e-174	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
COJIECFE_01917	1.96e-178	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
COJIECFE_01918	2.62e-202	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
COJIECFE_01919	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
COJIECFE_01920	8.45e-92	fabZ2	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
COJIECFE_01921	4.31e-95	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
COJIECFE_01922	1.08e-289	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
COJIECFE_01923	1.26e-162	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
COJIECFE_01924	2.85e-214	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
COJIECFE_01925	1.06e-48	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
COJIECFE_01926	1.62e-229	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
COJIECFE_01927	8.55e-99	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
COJIECFE_01928	8.02e-230	yneE	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_01929	1.13e-184	yneD	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
COJIECFE_01930	3.34e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF1648)
COJIECFE_01931	2.16e-162	adhB	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
COJIECFE_01932	3.38e-274	hipO1	-	-	E	ko:K21613	-	ko00000,ko01000,ko01002	Peptidase family M20/M25/M40
COJIECFE_01933	1.42e-186	-	-	-	E	-	-	-	glutamate:sodium symporter activity
COJIECFE_01934	9.89e-75	-	-	-	E	-	-	-	glutamate:sodium symporter activity
COJIECFE_01935	1.87e-88	ybbJ	-	-	K	-	-	-	Acetyltransferase (GNAT) family
COJIECFE_01936	5.85e-226	-	1.6.5.5	-	C	ko:K00344	-	ko00000,ko01000	Zinc-binding dehydrogenase
COJIECFE_01937	2.64e-47	entB	-	-	Q	-	-	-	Isochorismatase family
COJIECFE_01938	3.25e-181	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
COJIECFE_01939	3.77e-289	trpB	4.2.1.20, 5.3.1.24	-	E	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
COJIECFE_01940	1.57e-142	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
COJIECFE_01941	2.51e-162	trpC	4.1.1.48, 5.3.1.24	-	E	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
COJIECFE_01942	1.16e-223	trpD	2.4.2.18, 4.1.3.27	-	F	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
COJIECFE_01943	8.08e-135	trpG	4.1.3.27	-	EH	ko:K01658	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Peptidase C26
COJIECFE_01944	0.0	trpE	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Anthranilate synthase component I, N terminal region
COJIECFE_01946	0.0	XK27_00765	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
COJIECFE_01947	5.4e-175	ecsA_2	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
COJIECFE_01948	8.24e-178	-	-	-	P	ko:K06610	-	ko00000,ko02000	Major Facilitator Superfamily
COJIECFE_01949	1.19e-85	-	-	-	GK	-	-	-	ROK family
COJIECFE_01950	1.73e-136	gph	-	-	G	ko:K03292	-	ko00000	transporter
COJIECFE_01951	2.83e-275	-	-	-	G	-	-	-	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
COJIECFE_01952	1.3e-91	-	-	-	-	-	-	-	-
COJIECFE_01953	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
COJIECFE_01954	2.83e-114	-	-	-	-	-	-	-	-
COJIECFE_01955	2.83e-138	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
COJIECFE_01956	2.62e-239	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
COJIECFE_01957	5.87e-256	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
COJIECFE_01958	9.91e-289	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
COJIECFE_01959	1.32e-63	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
COJIECFE_01960	2.48e-276	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
COJIECFE_01961	8.32e-227	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
COJIECFE_01962	2.79e-316	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
COJIECFE_01963	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
COJIECFE_01964	5e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
COJIECFE_01965	5.39e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
COJIECFE_01966	1.31e-63	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
COJIECFE_01967	1.06e-49	-	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
COJIECFE_01968	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
COJIECFE_01969	3e-69	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
COJIECFE_01970	1.45e-161	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
COJIECFE_01971	5.06e-194	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
COJIECFE_01972	8.49e-144	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
COJIECFE_01973	4.03e-125	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
COJIECFE_01974	1.87e-112	ykuL	-	-	S	-	-	-	(CBS) domain
COJIECFE_01975	2.29e-112	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
COJIECFE_01976	6.72e-289	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
COJIECFE_01977	2.31e-202	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
COJIECFE_01978	1.88e-75	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
COJIECFE_01979	7.63e-92	-	-	-	-	-	-	-	-
COJIECFE_01980	9.11e-106	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
COJIECFE_01981	8.96e-275	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
COJIECFE_01982	1.56e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
COJIECFE_01983	7.88e-211	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
COJIECFE_01984	2.44e-65	-	-	-	S	ko:K09004	-	ko00000	DsrE/DsrF-like family
COJIECFE_01985	2.21e-168	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
COJIECFE_01986	2.06e-205	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
COJIECFE_01987	1.8e-222	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
COJIECFE_01988	2.9e-54	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
COJIECFE_01989	1.22e-163	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
COJIECFE_01990	1.97e-72	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
COJIECFE_01991	2e-47	-	-	-	NU	ko:K02246	-	ko00000,ko00002,ko02044	general secretion pathway protein
COJIECFE_01992	3.03e-27	-	-	-	-	ko:K02671	-	ko00000,ko02035,ko02044	-
COJIECFE_01993	3.73e-112	-	-	-	S	-	-	-	Prokaryotic N-terminal methylation motif
COJIECFE_01995	1.56e-236	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
COJIECFE_01996	4.7e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
COJIECFE_01997	0.0	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
COJIECFE_01998	1.66e-150	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
COJIECFE_01999	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
COJIECFE_02000	1.96e-116	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
COJIECFE_02001	7.18e-189	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
COJIECFE_02002	4.69e-151	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
COJIECFE_02003	8.38e-152	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
COJIECFE_02004	1.04e-140	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
COJIECFE_02005	2e-98	yugI	-	-	J	ko:K07570,ko:K07571	-	ko00000	general stress protein
COJIECFE_02006	1.11e-84	-	-	-	-	-	-	-	-
COJIECFE_02007	1.12e-261	-	-	-	T	-	-	-	diguanylate cyclase
COJIECFE_02008	9.17e-45	-	-	-	-	-	-	-	-
COJIECFE_02009	2.29e-48	-	-	-	-	-	-	-	-
COJIECFE_02010	5.92e-107	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	AsnC family
COJIECFE_02011	2.47e-222	ykfC	3.4.14.13	-	M	ko:K20742	-	ko00000,ko01000,ko01002	NlpC/P60 family
COJIECFE_02012	6.71e-206	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
COJIECFE_02014	2.68e-32	-	-	-	-	-	-	-	-
COJIECFE_02015	8.05e-178	-	-	-	F	-	-	-	NUDIX domain
COJIECFE_02016	2.78e-273	yceI	-	-	EGP	ko:K08369	-	ko00000,ko02000	Major Facilitator
COJIECFE_02017	1.31e-64	-	-	-	-	-	-	-	-
COJIECFE_02018	6.24e-120	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
COJIECFE_02020	1.04e-217	-	-	-	EG	-	-	-	EamA-like transporter family
COJIECFE_02021	6.12e-51	XK27_08630	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
COJIECFE_02022	2.12e-308	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
COJIECFE_02023	1.45e-173	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
COJIECFE_02024	0.0	yclK	-	-	T	-	-	-	Histidine kinase
COJIECFE_02025	1.83e-277	ywbD	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	S-adenosylmethionine-dependent methyltransferase
COJIECFE_02026	2.51e-200	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
COJIECFE_02027	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
COJIECFE_02028	8.25e-31	-	-	-	-	-	-	-	-
COJIECFE_02029	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_02030	0.0	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
COJIECFE_02031	0.0	-	3.6.3.44	-	P	ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter transmembrane region
COJIECFE_02032	4.63e-24	-	-	-	-	-	-	-	-
COJIECFE_02033	2.16e-26	-	-	-	-	-	-	-	-
COJIECFE_02034	9.35e-24	-	-	-	-	-	-	-	-
COJIECFE_02035	9.35e-24	-	-	-	-	-	-	-	-
COJIECFE_02036	1.07e-26	-	-	-	-	-	-	-	-
COJIECFE_02037	1.56e-22	-	-	-	-	-	-	-	-
COJIECFE_02038	3.26e-24	-	-	-	-	-	-	-	-
COJIECFE_02039	6.58e-24	-	-	-	-	-	-	-	-
COJIECFE_02040	0.0	inlJ	-	-	M	-	-	-	MucBP domain
COJIECFE_02041	0.0	-	-	-	D	-	-	-	nuclear chromosome segregation
COJIECFE_02042	1.27e-109	-	-	-	K	-	-	-	MarR family
COJIECFE_02043	4.75e-31	-	-	-	-	-	-	-	-
COJIECFE_02044	1.28e-51	-	-	-	-	-	-	-	-
COJIECFE_02046	8.08e-40	-	-	-	-	-	-	-	-
COJIECFE_02048	7.57e-74	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
COJIECFE_02049	4.36e-162	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
COJIECFE_02050	2.61e-16	-	-	-	-	-	-	-	-
COJIECFE_02053	1.65e-101	-	-	-	S	-	-	-	Domain of Unknown Function with PDB structure (DUF3862)
COJIECFE_02055	6.54e-92	-	-	-	-	-	-	-	-
COJIECFE_02058	1.27e-16	-	-	-	S	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
COJIECFE_02061	4.16e-22	-	-	-	K	ko:K22299	-	ko00000,ko03000	sequence-specific DNA binding
COJIECFE_02062	6.94e-05	-	-	-	K	-	-	-	PFAM helix-turn-helix domain protein
COJIECFE_02063	1.72e-172	pi112	-	-	L	-	-	-	PDDEXK-like domain of unknown function (DUF3799)
COJIECFE_02064	6.41e-207	-	-	-	L	-	-	-	DnaD domain protein
COJIECFE_02065	2.67e-66	-	-	-	-	-	-	-	-
COJIECFE_02066	1.29e-80	-	-	-	-	-	-	-	-
COJIECFE_02067	5.7e-87	-	-	-	L	-	-	-	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
COJIECFE_02068	5.18e-08	-	-	-	-	-	-	-	-
COJIECFE_02069	3.86e-107	-	-	-	S	-	-	-	Phage transcriptional regulator, ArpU family
COJIECFE_02073	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
COJIECFE_02074	1.55e-89	-	-	-	O	-	-	-	OsmC-like protein
COJIECFE_02075	3.8e-61	-	-	-	-	-	-	-	-
COJIECFE_02076	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
COJIECFE_02077	5.89e-113	-	-	-	-	-	-	-	-
COJIECFE_02078	1.01e-188	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
COJIECFE_02079	7.48e-96	-	-	-	F	-	-	-	Nudix hydrolase
COJIECFE_02080	1.48e-27	-	-	-	-	-	-	-	-
COJIECFE_02081	2.45e-134	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
COJIECFE_02082	2.02e-106	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
COJIECFE_02083	8.84e-18	-	3.2.1.14	GH18	-	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	-
COJIECFE_02084	2.39e-187	-	-	-	-	-	-	-	-
COJIECFE_02085	1.99e-145	gph1	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD hydrolase, family IA, variant
COJIECFE_02086	1.86e-267	aspC	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
COJIECFE_02087	1.03e-217	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
COJIECFE_02088	1.28e-54	-	-	-	-	-	-	-	-
COJIECFE_02090	2.3e-172	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
COJIECFE_02091	3.39e-190	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
COJIECFE_02092	4.45e-140	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
COJIECFE_02093	1.27e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
COJIECFE_02094	7.04e-108	-	-	-	G	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
COJIECFE_02095	7.77e-197	-	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
COJIECFE_02096	0.0	-	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
COJIECFE_02097	4.87e-180	-	3.5.1.105	-	G	ko:K03478	-	ko00000,ko01000	YdjC-like protein
COJIECFE_02098	0.0	steT	-	-	E	ko:K03294	-	ko00000	amino acid
COJIECFE_02099	6.26e-96	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
COJIECFE_02100	8.87e-191	-	-	-	S	-	-	-	Sulfite exporter TauE/SafE
COJIECFE_02101	8.83e-93	-	-	-	K	-	-	-	MarR family
COJIECFE_02102	3.22e-269	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
COJIECFE_02103	2.93e-109	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
COJIECFE_02104	1.81e-128	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_02105	9.85e-299	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
COJIECFE_02106	4.6e-102	rppH3	-	-	F	-	-	-	NUDIX domain
COJIECFE_02107	2.27e-53	sugE	-	-	U	ko:K11741	-	ko00000,ko02000	Multidrug resistance protein
COJIECFE_02108	4.42e-36	-	-	-	-	-	-	-	-
COJIECFE_02109	1.57e-164	pgm3	-	-	G	-	-	-	Phosphoglycerate mutase family
COJIECFE_02110	6.94e-160	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
COJIECFE_02111	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
COJIECFE_02112	1.19e-226	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
COJIECFE_02113	1.11e-143	-	-	-	S	ko:K03975	-	ko00000	SNARE associated Golgi protein
COJIECFE_02114	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
COJIECFE_02115	1.46e-211	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
COJIECFE_02116	3.69e-230	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
COJIECFE_02117	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
COJIECFE_02119	3.56e-171	spoVK	-	-	O	ko:K06413	-	ko00000	ATPase family associated with various cellular activities (AAA)
COJIECFE_02121	9.16e-61	-	-	-	L	-	-	-	Helix-turn-helix domain
COJIECFE_02122	1.51e-22	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
COJIECFE_02123	8.56e-38	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
COJIECFE_02124	6.67e-30	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
COJIECFE_02126	2.4e-137	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COJIECFE_02127	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
COJIECFE_02128	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
COJIECFE_02129	2.21e-227	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_02130	3.21e-215	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
COJIECFE_02131	3.8e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
COJIECFE_02132	9.17e-126	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
COJIECFE_02133	1.07e-43	-	-	-	S	-	-	-	YozE SAM-like fold
COJIECFE_02134	4.19e-203	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
COJIECFE_02135	0.0	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
COJIECFE_02136	1.18e-310	-	-	-	M	-	-	-	Glycosyl transferase family group 2
COJIECFE_02137	3.22e-87	-	-	-	-	-	-	-	-
COJIECFE_02138	0.0	gshR1	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
COJIECFE_02139	4.26e-98	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
COJIECFE_02140	4.69e-40	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
COJIECFE_02141	5.9e-57	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
COJIECFE_02142	0.0	tarL	2.7.8.14, 2.7.8.47	-	H	ko:K18704	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
COJIECFE_02143	1.18e-272	tarK	2.7.8.14, 2.7.8.46, 2.7.8.47	-	H	ko:K18704,ko:K21592	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
COJIECFE_02144	6.51e-247	tarJ	1.1.1.137, 1.1.1.405	-	E	ko:K05352,ko:K21680	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
COJIECFE_02145	1.97e-162	tarI	2.7.7.40, 2.7.7.60	-	I	ko:K00991,ko:K21030	ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
COJIECFE_02146	3.35e-290	-	-	-	-	-	-	-	-
COJIECFE_02147	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
COJIECFE_02148	7.79e-78	-	-	-	-	-	-	-	-
COJIECFE_02149	2.79e-181	-	-	-	-	-	-	-	-
COJIECFE_02150	5.02e-311	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
COJIECFE_02151	1.74e-175	XK27_00890	-	-	S	ko:K08974	-	ko00000	Domain of unknown function (DUF368)
COJIECFE_02152	9.3e-167	yejC	-	-	S	-	-	-	Protein of unknown function (DUF1003)
COJIECFE_02153	3.14e-66	XK27_08430	-	-	S	-	-	-	Staphylococcal protein of unknown function (DUF960)
COJIECFE_02155	2.44e-267	pmrB	-	-	EGP	-	-	-	Major Facilitator Superfamily
COJIECFE_02156	4.87e-191	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
COJIECFE_02157	2.37e-65	-	-	-	-	-	-	-	-
COJIECFE_02158	2.29e-36	-	-	-	-	-	-	-	-
COJIECFE_02159	4.81e-169	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
COJIECFE_02160	2.47e-101	yjcF	3.5.4.33, 4.4.1.8	-	K	ko:K02348,ko:K11991,ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007,ko03016	protein acetylation
COJIECFE_02161	1.11e-205	-	-	-	S	-	-	-	EDD domain protein, DegV family
COJIECFE_02162	1.97e-87	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_02163	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
COJIECFE_02164	7.53e-142	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
COJIECFE_02165	4.87e-205	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_02166	5.37e-117	-	-	-	F	-	-	-	NUDIX domain
COJIECFE_02167	3.42e-176	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2087)
COJIECFE_02168	4.2e-92	-	-	-	S	-	-	-	LuxR family transcriptional regulator
COJIECFE_02169	2.24e-167	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	Chloramphenicol acetyltransferase
COJIECFE_02170	4.31e-149	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
COJIECFE_02171	2.38e-156	-	-	-	-	-	-	-	-
COJIECFE_02172	7.01e-302	-	-	-	NU	-	-	-	Mycoplasma protein of unknown function, DUF285
COJIECFE_02173	1.47e-83	-	-	-	-	-	-	-	-
COJIECFE_02174	2.7e-131	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
COJIECFE_02175	8.64e-183	ynjC	-	-	S	-	-	-	Cell surface protein
COJIECFE_02176	4.78e-43	ynjC	-	-	S	-	-	-	Cell surface protein
COJIECFE_02177	1.36e-148	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
COJIECFE_02178	1.27e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
COJIECFE_02179	1.27e-223	-	-	-	C	-	-	-	Alcohol dehydrogenase GroES-like domain
COJIECFE_02180	2.01e-135	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
COJIECFE_02181	1.47e-245	-	-	-	S	-	-	-	Cell surface protein
COJIECFE_02182	2.69e-99	-	-	-	-	-	-	-	-
COJIECFE_02183	0.0	-	-	-	-	-	-	-	-
COJIECFE_02184	1.24e-288	hpk9	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
COJIECFE_02185	1.47e-51	-	-	-	S	ko:K07343	-	ko00000	TfoX C-terminal domain
COJIECFE_02186	2.81e-181	-	-	-	K	-	-	-	Helix-turn-helix domain
COJIECFE_02187	0.0	aapA	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
COJIECFE_02188	1.36e-84	-	-	-	S	-	-	-	Cupredoxin-like domain
COJIECFE_02189	1.49e-58	-	-	-	S	-	-	-	Cupredoxin-like domain
COJIECFE_02190	0.0	copA	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
COJIECFE_02191	1.28e-82	adhC	1.1.1.90	-	C	ko:K00055	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Zn-dependent alcohol dehydrogenases, class III
COJIECFE_02192	8.34e-169	adhC	1.1.1.90	-	C	ko:K00055	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Zn-dependent alcohol dehydrogenases, class III
COJIECFE_02193	4.2e-286	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	Dehydrogenase
COJIECFE_02194	1.67e-86	lysM	-	-	M	-	-	-	LysM domain
COJIECFE_02195	0.0	-	-	-	E	-	-	-	Amino Acid
COJIECFE_02196	2.47e-185	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
COJIECFE_02197	2.32e-83	-	-	-	-	-	-	-	-
COJIECFE_02199	2.96e-209	yhxD	-	-	IQ	-	-	-	KR domain
COJIECFE_02200	3.1e-288	amd	-	-	E	-	-	-	Peptidase family M20/M25/M40
COJIECFE_02201	7.72e-14	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_02202	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_02203	0.0	-	-	-	V	ko:K06147,ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
COJIECFE_02204	4.62e-52	-	-	-	V	ko:K06147,ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
COJIECFE_02205	1.1e-275	-	-	-	-	-	-	-	-
COJIECFE_02206	2.4e-151	-	-	-	GM	-	-	-	NAD(P)H-binding
COJIECFE_02207	3.83e-178	gdh	1.1.1.47, 1.1.1.53	-	IQ	ko:K00034,ko:K00038	ko00030,ko00140,ko01100,ko01120,ko01200,map00030,map00140,map01100,map01120,map01200	ko00000,ko00001,ko01000	reductase
COJIECFE_02208	3.55e-79	-	-	-	I	-	-	-	sulfurtransferase activity
COJIECFE_02209	6.7e-102	yphH	-	-	S	-	-	-	Cupin domain
COJIECFE_02210	1.37e-119	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
COJIECFE_02211	2.94e-149	-	-	-	GM	-	-	-	NAD(P)H-binding
COJIECFE_02212	8.47e-178	-	-	-	C	-	-	-	C4-dicarboxylate transmembrane transporter activity
COJIECFE_02213	0.000138	yjdF	-	-	S	-	-	-	Protein of unknown function (DUF2992)
COJIECFE_02214	4.36e-208	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_02215	2.02e-168	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
COJIECFE_02216	1.01e-251	-	-	-	-	-	-	-	-
COJIECFE_02217	3.53e-254	-	-	-	-	-	-	-	-
COJIECFE_02218	4.94e-213	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
COJIECFE_02219	1.18e-85	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
COJIECFE_02220	1.74e-251	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
COJIECFE_02221	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
COJIECFE_02222	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
COJIECFE_02223	8.64e-224	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
COJIECFE_02224	2.84e-189	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
COJIECFE_02225	7.92e-217	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
COJIECFE_02226	1.15e-94	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
COJIECFE_02227	7.7e-110	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
COJIECFE_02228	4.81e-229	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
COJIECFE_02229	9.21e-94	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
COJIECFE_02230	1.09e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
COJIECFE_02231	2.32e-194	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
COJIECFE_02232	7.06e-164	-	-	-	C	-	-	-	Enoyl-(Acyl carrier protein) reductase
COJIECFE_02233	5.8e-217	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
COJIECFE_02234	3.04e-283	tagB	2.7.8.44	-	M	ko:K21285	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
COJIECFE_02235	4.35e-204	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
COJIECFE_02236	2.61e-132	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
COJIECFE_02237	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
COJIECFE_02238	2.47e-310	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
COJIECFE_02239	4.01e-200	lytH	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
COJIECFE_02240	1.72e-209	-	-	-	G	-	-	-	Fructosamine kinase
COJIECFE_02241	2.43e-150	yjcF	-	-	J	-	-	-	HAD-hyrolase-like
COJIECFE_02242	8.2e-102	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
COJIECFE_02243	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
COJIECFE_02244	2.56e-76	-	-	-	-	-	-	-	-
COJIECFE_02245	3.13e-172	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
COJIECFE_02246	5.85e-226	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
COJIECFE_02247	4.82e-107	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
COJIECFE_02248	4.78e-65	-	-	-	-	-	-	-	-
COJIECFE_02249	1.73e-67	-	-	-	-	-	-	-	-
COJIECFE_02252	1.24e-159	int7	-	-	L	-	-	-	Belongs to the 'phage' integrase family
COJIECFE_02253	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
COJIECFE_02254	8.93e-249	tas3	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
COJIECFE_02255	1.06e-231	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
COJIECFE_02256	4.27e-253	galM3	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
COJIECFE_02257	0.0	lacP	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
COJIECFE_02258	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
COJIECFE_02259	1.64e-238	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
COJIECFE_02260	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
COJIECFE_02261	2.73e-285	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
COJIECFE_02262	1.47e-244	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
COJIECFE_02263	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
COJIECFE_02264	1.19e-234	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
COJIECFE_02265	3.4e-100	-	-	-	K	ko:K07726	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
COJIECFE_02266	1.03e-138	fic	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
COJIECFE_02267	1.29e-235	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
COJIECFE_02268	5.06e-298	-	-	-	P	ko:K06610	-	ko00000,ko02000	Major Facilitator Superfamily
COJIECFE_02269	0.0	ram2	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
COJIECFE_02270	5.41e-131	-	-	-	P	ko:K06610	-	ko00000,ko02000	Sugar (and other) transporter
COJIECFE_02271	5.68e-149	-	-	-	P	ko:K06610	-	ko00000,ko02000	Sugar (and other) transporter
COJIECFE_02272	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
COJIECFE_02273	1.13e-228	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
COJIECFE_02274	2.18e-298	celB	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_02275	2.81e-90	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
COJIECFE_02276	0.0	rafA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
COJIECFE_02277	0.0	lacA	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
COJIECFE_02278	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
COJIECFE_02279	0.0	ubiB	-	-	S	ko:K03688	-	ko00000	ABC1 family
COJIECFE_02280	1.38e-140	aqpZ	-	-	U	ko:K06188	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
COJIECFE_02281	3.31e-282	-	-	-	S	-	-	-	associated with various cellular activities
COJIECFE_02282	1.87e-316	-	-	-	S	-	-	-	Putative metallopeptidase domain
COJIECFE_02283	1.03e-65	-	-	-	-	-	-	-	-
COJIECFE_02284	8.19e-134	yezE	-	-	K	ko:K16137	-	ko00000,ko03000	Bacterial regulatory proteins, tetR family
COJIECFE_02286	1.54e-181	-	-	-	S	-	-	-	zinc-ribbon domain
COJIECFE_02287	0.0	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
COJIECFE_02288	0.0	-	4.1.1.98	-	H	ko:K03182	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
COJIECFE_02289	4.34e-314	-	-	-	P	-	-	-	Sodium:sulfate symporter transmembrane region
COJIECFE_02290	3.46e-210	-	-	-	K	-	-	-	LysR substrate binding domain
COJIECFE_02291	2.99e-133	-	-	-	-	-	-	-	-
COJIECFE_02292	7.16e-30	-	-	-	-	-	-	-	-
COJIECFE_02293	1.26e-245	dus	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
COJIECFE_02294	3.08e-241	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
COJIECFE_02295	6.98e-95	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
COJIECFE_02296	1.56e-108	-	-	-	-	-	-	-	-
COJIECFE_02297	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
COJIECFE_02298	7.74e-135	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
COJIECFE_02299	1.31e-94	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
COJIECFE_02300	6.41e-57	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
COJIECFE_02301	1.85e-63	-	-	-	T	-	-	-	Diguanylate cyclase, GGDEF domain
COJIECFE_02302	4.99e-195	-	-	-	T	-	-	-	Diguanylate cyclase, GGDEF domain
COJIECFE_02303	8.68e-118	pts21A	-	-	G	ko:K02755	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
COJIECFE_02304	2e-52	-	-	-	S	-	-	-	Cytochrome B5
COJIECFE_02305	0.0	-	-	-	-	-	-	-	-
COJIECFE_02306	6.11e-169	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
COJIECFE_02307	2.85e-206	-	-	-	I	-	-	-	alpha/beta hydrolase fold
COJIECFE_02308	0.0	npp	-	-	S	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
COJIECFE_02309	2.83e-297	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
COJIECFE_02310	7.97e-222	ropB	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
COJIECFE_02311	9.48e-265	-	-	-	EGP	-	-	-	Major facilitator Superfamily
COJIECFE_02312	2.28e-126	uvrA3	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC
COJIECFE_02313	0.0	uvrA3	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC
COJIECFE_02314	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
COJIECFE_02315	9.05e-188	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
COJIECFE_02316	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
COJIECFE_02319	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
COJIECFE_02320	1.5e-194	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
COJIECFE_02324	9.02e-66	-	-	-	S	-	-	-	Cupin 2, conserved barrel domain protein
COJIECFE_02325	1.61e-70	-	-	-	S	-	-	-	Cupin domain
COJIECFE_02326	1.08e-212	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
COJIECFE_02327	1.59e-247	ysdE	-	-	P	-	-	-	Citrate transporter
COJIECFE_02328	1.06e-195	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
COJIECFE_02329	5.35e-175	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
COJIECFE_02330	2.92e-280	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
COJIECFE_02331	5.41e-160	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
COJIECFE_02332	6.62e-176	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
COJIECFE_02333	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
COJIECFE_02334	5.27e-197	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
COJIECFE_02335	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
COJIECFE_02336	6.3e-95	-	-	-	-	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	-
COJIECFE_02337	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
COJIECFE_02338	1.31e-107	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
COJIECFE_02339	6.98e-302	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
COJIECFE_02340	1.02e-202	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
COJIECFE_02342	2.02e-66	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
COJIECFE_02347	1.32e-19	-	-	-	K	-	-	-	Helix-turn-helix
COJIECFE_02348	9.18e-129	-	-	-	K	-	-	-	ORF6N domain
COJIECFE_02351	7.57e-12	-	-	-	-	-	-	-	-
COJIECFE_02355	3.56e-28	-	-	-	-	-	-	-	-
COJIECFE_02357	1.73e-187	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
COJIECFE_02358	2.05e-138	-	-	-	S	-	-	-	ERF superfamily
COJIECFE_02359	8.01e-91	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
COJIECFE_02360	6.41e-171	-	-	-	S	-	-	-	Putative HNHc nuclease
COJIECFE_02361	1.7e-52	-	-	-	L	-	-	-	Conserved phage C-terminus (Phg_2220_C)
COJIECFE_02362	4.91e-170	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
COJIECFE_02364	1.28e-60	-	-	-	-	-	-	-	-
COJIECFE_02368	3.26e-44	-	-	-	-	-	-	-	-
COJIECFE_02370	1.86e-210	nanA	4.1.3.3	-	EM	ko:K01639	ko00520,map00520	ko00000,ko00001,ko01000	Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
COJIECFE_02371	4.66e-197	nanK	-	-	GK	-	-	-	ROK family
COJIECFE_02372	9.03e-173	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
COJIECFE_02373	1.63e-262	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
COJIECFE_02374	0.0	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
COJIECFE_02375	3.89e-205	-	-	-	I	-	-	-	alpha/beta hydrolase fold
COJIECFE_02376	7.3e-210	-	-	-	I	-	-	-	alpha/beta hydrolase fold
COJIECFE_02377	6.47e-95	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
COJIECFE_02378	3.76e-180	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
COJIECFE_02379	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
COJIECFE_02380	2.13e-145	-	-	-	K	ko:K02444	-	ko00000,ko03000	DeoR C terminal sensor domain
COJIECFE_02381	3.99e-106	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
COJIECFE_02382	6e-60	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
COJIECFE_02383	8.37e-296	gatC	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
COJIECFE_02384	2.14e-246	-	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
COJIECFE_02385	9.14e-146	gph3	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
COJIECFE_02386	0.0	-	-	-	G	ko:K03483	-	ko00000,ko03000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
COJIECFE_02387	1.58e-101	-	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
COJIECFE_02388	7.29e-61	ulaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase system galactitol-specific IIB component
COJIECFE_02389	1.66e-305	ulaA	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
COJIECFE_02390	1.02e-147	tal	2.2.1.2	-	F	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
COJIECFE_02391	0.0	tkt	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
COJIECFE_02392	1.08e-221	cytR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Transcriptional regulator, LacI family
COJIECFE_02393	0.0	treP	2.4.1.64	GH65	G	ko:K05342	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
COJIECFE_02394	1.52e-202	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
COJIECFE_02395	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
COJIECFE_02396	0.0	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
COJIECFE_02397	0.0	pbg9	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
COJIECFE_02398	1.19e-24	bglG4	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
COJIECFE_02399	1.02e-102	uspA3	-	-	T	-	-	-	universal stress protein
COJIECFE_02400	5.88e-202	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
COJIECFE_02401	3.67e-24	-	-	-	-	-	-	-	-
COJIECFE_02402	1.09e-55	-	-	-	S	-	-	-	zinc-ribbon domain
COJIECFE_02404	6.75e-08	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
COJIECFE_02405	4.05e-64	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
COJIECFE_02406	1.38e-30	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
COJIECFE_02407	5.31e-285	-	-	-	M	-	-	-	Glycosyl transferases group 1
COJIECFE_02408	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
COJIECFE_02409	4.74e-208	-	-	-	S	-	-	-	Putative esterase
COJIECFE_02410	3.53e-169	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_02411	6.74e-117	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
COJIECFE_02412	1.74e-178	-	-	-	-	-	-	-	-
COJIECFE_02413	5.66e-150	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
COJIECFE_02414	8.05e-179	rrp8	-	-	K	-	-	-	LytTr DNA-binding domain
COJIECFE_02415	1.7e-118	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
COJIECFE_02416	1.55e-79	-	-	-	-	-	-	-	-
COJIECFE_02417	2.61e-96	hsp2	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
COJIECFE_02418	2.97e-76	-	-	-	-	-	-	-	-
COJIECFE_02419	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
COJIECFE_02420	1.18e-114	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
COJIECFE_02421	0.0	nhaP3	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
COJIECFE_02422	3.77e-269	yttB	-	-	EGP	-	-	-	Major Facilitator
COJIECFE_02423	4.71e-81	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
COJIECFE_02424	1.27e-219	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
COJIECFE_02425	4.71e-74	-	-	-	S	-	-	-	SdpI/YhfL protein family
COJIECFE_02426	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
COJIECFE_02427	0.0	gabR	-	-	K	ko:K00375	-	ko00000,ko03000	Bacterial regulatory proteins, gntR family
COJIECFE_02428	1.02e-277	araT2	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
COJIECFE_02429	1.21e-183	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
COJIECFE_02430	3.59e-26	-	-	-	-	-	-	-	-
COJIECFE_02431	8.51e-169	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
COJIECFE_02432	5.73e-208	mleR	-	-	K	-	-	-	LysR family
COJIECFE_02433	4.23e-184	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
COJIECFE_02434	1.45e-218	dgoD	4.2.1.6, 4.2.1.8	-	M	ko:K01684,ko:K08323	ko00040,ko00052,ko01100,ko01120,map00040,map00052,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Mandelate racemase muconate lactonizing enzyme
COJIECFE_02435	2.18e-185	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
COJIECFE_02436	3.55e-155	gpm5	-	-	G	-	-	-	Phosphoglycerate mutase family
COJIECFE_02437	1.12e-130	-	-	-	K	-	-	-	FR47-like protein
COJIECFE_02438	8.44e-163	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
COJIECFE_02439	2.31e-278	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
COJIECFE_02440	1.53e-241	-	-	-	-	-	-	-	-
COJIECFE_02441	5.03e-180	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
COJIECFE_02442	5.06e-68	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
COJIECFE_02443	9.54e-209	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
COJIECFE_02444	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
COJIECFE_02445	4.95e-44	-	-	-	L	-	-	-	leucine-zipper of insertion element IS481
COJIECFE_02446	9.05e-55	-	-	-	-	-	-	-	-
COJIECFE_02447	5.75e-285	-	-	-	L	-	-	-	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
COJIECFE_02448	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
COJIECFE_02449	1.38e-254	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
COJIECFE_02450	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
COJIECFE_02451	1.3e-134	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
COJIECFE_02452	1.44e-104	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_02454	0.0	-	-	-	C	-	-	-	FMN_bind
COJIECFE_02455	1.37e-220	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_02456	2.67e-124	-	-	-	K	-	-	-	Helix-turn-helix domain
COJIECFE_02457	2.49e-178	-	-	-	K	-	-	-	sequence-specific DNA binding
COJIECFE_02458	2.48e-63	-	-	-	S	-	-	-	AAA domain
COJIECFE_02459	9.7e-34	-	-	-	S	-	-	-	AAA domain
COJIECFE_02460	1.42e-08	-	-	-	-	-	-	-	-
COJIECFE_02461	1.49e-52	-	-	-	M	-	-	-	MucBP domain
COJIECFE_02462	0.0	-	-	-	M	-	-	-	MucBP domain
COJIECFE_02463	1.14e-117	XK27_09665	-	-	G	ko:K15640	-	ko00000	Phosphoglycerate mutase family
COJIECFE_02464	1.81e-150	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
COJIECFE_02465	4.19e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
COJIECFE_02466	1.19e-107	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
COJIECFE_02467	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
COJIECFE_02468	4.46e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
COJIECFE_02469	4.34e-145	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
COJIECFE_02470	9.83e-141	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
COJIECFE_02471	2.27e-59	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
COJIECFE_02472	6.61e-193	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
COJIECFE_02473	1.85e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
COJIECFE_02474	3.59e-69	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
COJIECFE_02475	5.46e-152	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
COJIECFE_02476	8.29e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
COJIECFE_02477	1.11e-33	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
COJIECFE_02478	1.96e-54	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
COJIECFE_02479	2.98e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
COJIECFE_02480	4.1e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
COJIECFE_02481	3.53e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
COJIECFE_02482	4.99e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
COJIECFE_02483	2.14e-123	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
COJIECFE_02484	1.75e-75	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
COJIECFE_02485	5.32e-109	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
COJIECFE_02486	8.44e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
COJIECFE_02487	1.32e-91	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
COJIECFE_02488	5.95e-300	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
COJIECFE_02489	3.72e-160	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
COJIECFE_02490	9.87e-45	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
COJIECFE_02491	9.65e-79	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
COJIECFE_02492	7.71e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
COJIECFE_02493	2.19e-220	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
COJIECFE_02494	3.85e-81	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
COJIECFE_02495	1.02e-233	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
COJIECFE_02496	1.41e-122	hepA	2.5.1.30	-	S	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Heptaprenyl diphosphate synthase component I
COJIECFE_02497	5.37e-112	-	-	-	S	-	-	-	NusG domain II
COJIECFE_02498	0.0	ndh	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
COJIECFE_02499	3.19e-194	-	-	-	S	-	-	-	FMN_bind
COJIECFE_02500	6.21e-264	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
COJIECFE_02501	1.98e-197	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
COJIECFE_02502	2.01e-211	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
COJIECFE_02503	2.79e-183	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
COJIECFE_02504	3.06e-194	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
COJIECFE_02505	4.58e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
COJIECFE_02506	8.98e-86	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
COJIECFE_02507	1.12e-129	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_02508	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
COJIECFE_02509	1.59e-242	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
COJIECFE_02510	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
COJIECFE_02511	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
COJIECFE_02512	5.11e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
COJIECFE_02513	9.48e-263	camS	-	-	S	-	-	-	sex pheromone
COJIECFE_02514	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
COJIECFE_02515	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
COJIECFE_02516	5.68e-279	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
COJIECFE_02517	1.13e-120	yebE	-	-	S	-	-	-	UPF0316 protein
COJIECFE_02518	8.19e-134	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
COJIECFE_02519	3.41e-146	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
COJIECFE_02520	1.11e-234	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
COJIECFE_02521	4.92e-212	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
COJIECFE_02522	2.53e-233	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
COJIECFE_02523	2.2e-207	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
COJIECFE_02524	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
COJIECFE_02525	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
COJIECFE_02526	7.76e-234	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
COJIECFE_02527	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
COJIECFE_02528	0.0	-	-	-	S	ko:K06889	-	ko00000	Alpha beta
COJIECFE_02529	9.76e-30	-	-	-	-	-	-	-	-
COJIECFE_02530	1.15e-57	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
COJIECFE_02531	9.47e-173	repA	-	-	S	-	-	-	Replication initiator protein A
COJIECFE_02532	1.42e-57	-	-	-	-	-	-	-	-
COJIECFE_02533	3.11e-249	-	-	-	O	-	-	-	Heat shock 70 kDa protein
COJIECFE_02534	8.88e-65	-	-	-	L	-	-	-	Resolvase, N terminal domain
COJIECFE_02535	5.41e-22	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
COJIECFE_02536	2.6e-147	dam	2.1.1.72	-	L	ko:K07318	-	ko00000,ko01000,ko02048	D12 class N6 adenine-specific DNA methyltransferase
COJIECFE_02537	2.32e-80	dam	2.1.1.72	-	L	ko:K07318	-	ko00000,ko01000,ko02048	D12 class N6 adenine-specific DNA methyltransferase
COJIECFE_02538	1.62e-145	-	-	-	L	-	-	-	AlwI restriction endonuclease
COJIECFE_02539	6.2e-129	-	-	-	L	-	-	-	Integrase
COJIECFE_02540	4.67e-65	-	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
COJIECFE_02541	1.68e-35	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
COJIECFE_02542	6.27e-172	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
COJIECFE_02543	7.66e-26	-	-	-	-	-	-	-	-
COJIECFE_02544	0.0	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
COJIECFE_02545	1.33e-94	-	-	-	-	-	-	-	-
COJIECFE_02547	3.72e-294	traK	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
COJIECFE_02548	3.88e-87	-	-	-	-	-	-	-	-
COJIECFE_02549	9.67e-59	-	-	-	CO	-	-	-	COG0526, thiol-disulfide isomerase and thioredoxins
COJIECFE_02550	1.53e-76	-	-	-	-	-	-	-	-
COJIECFE_02551	3.2e-208	-	-	-	M	-	-	-	CHAP domain
COJIECFE_02552	8.49e-293	-	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukC
COJIECFE_02553	0.0	traE	-	-	U	-	-	-	Psort location Cytoplasmic, score
COJIECFE_02554	1.34e-153	-	-	-	-	-	-	-	-
COJIECFE_02555	3.64e-69	-	-	-	-	-	-	-	-
COJIECFE_02556	3.12e-68	-	-	-	S	-	-	-	Cag pathogenicity island, type IV secretory system
COJIECFE_02557	3.26e-94	-	-	-	-	-	-	-	-
COJIECFE_02559	0.0	traA	-	-	L	-	-	-	MobA MobL family protein
COJIECFE_02560	1.41e-37	-	-	-	-	-	-	-	-
COJIECFE_02561	7.81e-56	-	-	-	-	-	-	-	-
COJIECFE_02563	0.0	oatA	-	-	I	-	-	-	Acyltransferase
COJIECFE_02564	2.9e-228	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
COJIECFE_02565	3.45e-231	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
COJIECFE_02566	0.0	pox2	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
COJIECFE_02567	4.23e-94	ribC1	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
COJIECFE_02568	9.17e-79	ribC1	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
COJIECFE_02569	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
COJIECFE_02570	1.79e-287	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
COJIECFE_02571	1.36e-27	-	-	-	-	-	-	-	-
COJIECFE_02572	6.16e-107	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_02573	7.8e-196	licD	-	-	M	ko:K07271	-	ko00000,ko01000	LicD family
COJIECFE_02574	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
COJIECFE_02575	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
COJIECFE_02576	4.45e-226	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
COJIECFE_02577	5.69e-312	-	-	-	EGP	-	-	-	Major Facilitator
COJIECFE_02578	1.41e-115	-	-	-	V	-	-	-	VanZ like family
COJIECFE_02579	3.88e-46	-	-	-	-	-	-	-	-
COJIECFE_02580	5.45e-94	spx1	-	-	P	ko:K16509	-	ko00000	ArsC family
COJIECFE_02582	2.79e-151	-	-	-	-	-	-	-	-
COJIECFE_02583	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
COJIECFE_02584	3.51e-197	-	-	-	G	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
COJIECFE_02585	2.87e-168	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
COJIECFE_02586	2.49e-95	-	-	-	-	-	-	-	-
COJIECFE_02587	5.62e-69	-	-	-	-	-	-	-	-
COJIECFE_02588	4.61e-222	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
COJIECFE_02589	6.25e-83	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
COJIECFE_02590	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
COJIECFE_02591	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
COJIECFE_02592	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
COJIECFE_02593	2.12e-90	-	-	-	G	-	-	-	Glycogen debranching enzyme
COJIECFE_02594	9e-63	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
COJIECFE_02595	1.22e-210	yjdB	-	-	S	-	-	-	Domain of unknown function (DUF4767)
COJIECFE_02596	2.02e-192	yisK	3.7.1.5, 4.1.1.68	-	Q	ko:K05921,ko:K16164	ko00350,ko01100,ko01120,ko01220,map00350,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Fumarylacetoacetate (FAA) hydrolase family
COJIECFE_02597	1.04e-94	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
COJIECFE_02598	1.1e-93	asp1	-	-	S	-	-	-	Asp23 family, cell envelope-related function
COJIECFE_02599	5.74e-32	-	-	-	-	-	-	-	-
COJIECFE_02600	1.37e-116	-	-	-	-	-	-	-	-
COJIECFE_02601	1.81e-50	ydaS	-	-	S	-	-	-	Transglycosylase associated protein
COJIECFE_02602	0.0	XK27_09800	-	-	I	-	-	-	Acyltransferase family
COJIECFE_02603	1.71e-59	-	-	-	S	-	-	-	MORN repeat
COJIECFE_02604	1.23e-266	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
COJIECFE_02605	5.06e-297	yceJ	-	-	EGP	ko:K08221	-	ko00000,ko02000	transporter
COJIECFE_02606	4.73e-206	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
COJIECFE_02607	2.13e-167	-	-	-	L	-	-	-	Helix-turn-helix domain
COJIECFE_02608	1.07e-74	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
COJIECFE_02609	3.87e-141	XK27_07075	-	-	V	ko:K07052	-	ko00000	CAAX protease self-immunity
COJIECFE_02610	7.8e-58	-	-	-	K	-	-	-	Helix-turn-helix domain
COJIECFE_02611	1.26e-70	-	-	-	-	-	-	-	-
COJIECFE_02612	6.28e-79	-	-	-	-	-	-	-	-
COJIECFE_02613	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
COJIECFE_02614	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
COJIECFE_02615	1.16e-140	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_02616	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
COJIECFE_02617	9.78e-102	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
COJIECFE_02625	1.62e-294	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
COJIECFE_02626	1.11e-148	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
COJIECFE_02627	1.29e-153	dacB	3.4.17.14	-	M	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	D-alanyl-D-alanine carboxypeptidase
COJIECFE_02628	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
COJIECFE_02629	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
COJIECFE_02630	1.7e-118	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_02631	7.14e-128	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
COJIECFE_02632	3.88e-198	-	-	-	I	-	-	-	alpha/beta hydrolase fold
COJIECFE_02633	4.15e-153	-	-	-	I	-	-	-	phosphatase
COJIECFE_02634	1.92e-241	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
COJIECFE_02635	7.76e-100	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
COJIECFE_02636	4.6e-169	-	-	-	S	-	-	-	Putative threonine/serine exporter
COJIECFE_02637	1.78e-42	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
COJIECFE_02638	3.58e-166	bglG4	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
COJIECFE_02639	0.0	bglP	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
COJIECFE_02640	0.0	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
COJIECFE_02641	5.33e-268	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
COJIECFE_02642	1.19e-202	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
COJIECFE_02643	5.07e-211	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
COJIECFE_02644	1.87e-316	pts29C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_02645	7.74e-174	-	-	-	K	-	-	-	UTRA domain
COJIECFE_02646	2.63e-200	estA	-	-	S	-	-	-	Putative esterase
COJIECFE_02647	4.93e-82	-	-	-	-	-	-	-	-
COJIECFE_02648	3.06e-260	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
COJIECFE_02649	5.77e-214	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
COJIECFE_02650	5.56e-212	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
COJIECFE_02651	3.87e-201	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
COJIECFE_02652	8.13e-206	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
COJIECFE_02653	1.71e-207	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
COJIECFE_02654	1.64e-281	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
COJIECFE_02655	4.62e-224	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
COJIECFE_02656	1.12e-212	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
COJIECFE_02657	3.65e-172	aroD	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
COJIECFE_02658	7.13e-228	apbE3	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
COJIECFE_02659	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
COJIECFE_02660	2.02e-85	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
COJIECFE_02663	1.17e-155	-	-	-	LM	-	-	-	DNA recombination
COJIECFE_02664	6.71e-24	-	-	-	S	-	-	-	Protein of unknown function (DUF1617)
COJIECFE_02666	4.66e-46	-	-	-	-	-	-	-	-
COJIECFE_02668	1.78e-07	-	-	-	S	-	-	-	Bacteriophage A118-like holin, Hol118
COJIECFE_02669	1.66e-91	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
COJIECFE_02670	9.24e-197	-	-	-	G	-	-	-	Peptidase_C39 like family
COJIECFE_02671	2.63e-217	manL	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
COJIECFE_02672	2.43e-174	manM	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
COJIECFE_02673	8.89e-218	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
COJIECFE_02674	9.05e-85	manO	-	-	S	-	-	-	Domain of unknown function (DUF956)
COJIECFE_02675	0.0	levR	-	-	K	-	-	-	Sigma-54 interaction domain
COJIECFE_02676	7.19e-94	levD	2.7.1.191, 2.7.1.202	-	G	ko:K02793,ko:K02794,ko:K11194	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
COJIECFE_02677	4.5e-113	manX	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
COJIECFE_02678	3.15e-229	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
COJIECFE_02679	9.24e-85	accB1	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	Biotin-requiring enzyme
COJIECFE_02680	1.7e-315	accC1	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase C-terminal domain
COJIECFE_02681	3.66e-184	accD1	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
COJIECFE_02682	1.23e-177	accA1	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
COJIECFE_02683	2.29e-234	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
COJIECFE_02685	5e-276	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
COJIECFE_02686	3.98e-169	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
COJIECFE_02687	1.01e-199	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
COJIECFE_02688	2.74e-266	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
COJIECFE_02689	1.57e-279	pbpX	-	-	V	-	-	-	Beta-lactamase
COJIECFE_02690	0.0	gdhA	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
COJIECFE_02691	1.18e-138	-	-	-	-	-	-	-	-
COJIECFE_02692	7.62e-97	-	-	-	-	-	-	-	-
COJIECFE_02694	4.56e-209	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
COJIECFE_02695	8.65e-311	pts14C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_02696	3.93e-99	-	-	-	T	-	-	-	Universal stress protein family
COJIECFE_02698	2.34e-315	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
COJIECFE_02699	7.89e-245	mocA	-	-	S	-	-	-	Oxidoreductase
COJIECFE_02700	2.54e-42	cspP	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
COJIECFE_02701	7.34e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
COJIECFE_02702	7.76e-186	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
COJIECFE_02703	5.63e-196	gntR	-	-	K	-	-	-	rpiR family
COJIECFE_02704	2.87e-215	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
COJIECFE_02705	5.6e-270	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_02706	2.51e-21	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_02707	0.0	yfgQ	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
COJIECFE_02708	2.94e-155	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
COJIECFE_02709	1.59e-76	-	-	-	-	-	-	-	-
COJIECFE_02710	7.79e-112	-	-	-	K	-	-	-	MerR HTH family regulatory protein
COJIECFE_02711	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
COJIECFE_02712	2.72e-152	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
COJIECFE_02713	1.46e-170	-	-	-	-	-	-	-	-
COJIECFE_02714	1.75e-47	-	-	-	K	-	-	-	MerR HTH family regulatory protein
COJIECFE_02715	6.77e-154	azlC	-	-	E	-	-	-	branched-chain amino acid
COJIECFE_02716	2.41e-66	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
COJIECFE_02717	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
COJIECFE_02718	1.2e-281	dapG	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Amino acid kinase family
COJIECFE_02719	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
COJIECFE_02720	0.0	xylP2	-	-	G	-	-	-	symporter
COJIECFE_02721	7.32e-247	-	-	-	I	-	-	-	alpha/beta hydrolase fold
COJIECFE_02722	2.74e-63	-	-	-	-	-	-	-	-
COJIECFE_02723	1.91e-272	gudD	4.2.1.40	-	M	ko:K01706	ko00053,ko01100,map00053,map01100	ko00000,ko00001,ko01000	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
COJIECFE_02724	4.58e-90	-	-	-	K	-	-	-	LysR substrate binding domain
COJIECFE_02725	4.77e-161	-	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
COJIECFE_02726	2.1e-215	yflS	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
COJIECFE_02727	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
COJIECFE_02728	2.78e-273	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
COJIECFE_02729	3.35e-157	-	-	-	-	-	-	-	-
COJIECFE_02730	8.94e-167	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
COJIECFE_02731	1.53e-179	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
COJIECFE_02732	3.75e-214	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
COJIECFE_02733	0.0	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
COJIECFE_02734	2.95e-239	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
COJIECFE_02735	1.88e-292	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
COJIECFE_02736	4.2e-139	-	-	-	GK	-	-	-	ROK family
COJIECFE_02737	1.03e-43	-	-	-	P	-	-	-	Major Facilitator Superfamily
COJIECFE_02738	1.13e-153	-	-	-	P	-	-	-	Major Facilitator Superfamily
COJIECFE_02739	4.86e-185	lipA	-	-	I	-	-	-	Carboxylesterase family
COJIECFE_02740	1.24e-144	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
COJIECFE_02741	1.05e-05	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
COJIECFE_02742	1.04e-172	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
COJIECFE_02743	9.14e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
COJIECFE_02744	5.09e-124	-	-	-	-	-	-	-	-
COJIECFE_02745	2.22e-237	-	-	-	P	ko:K06901	-	ko00000,ko02000	secondary active sulfate transmembrane transporter activity
COJIECFE_02746	3.26e-119	-	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Phosphoribosyl transferase domain
COJIECFE_02758	4.87e-59	adhR	-	-	K	-	-	-	helix_turn_helix, mercury resistance
COJIECFE_02759	2.66e-38	-	-	-	-	-	-	-	-
COJIECFE_02760	6.88e-151	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
COJIECFE_02761	1.43e-57	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
COJIECFE_02762	0.0	umuC	-	-	L	ko:K03502	-	ko00000,ko03400	impB/mucB/samB family C-terminal domain
COJIECFE_02763	3.55e-91	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
COJIECFE_02764	1.22e-272	-	-	-	T	-	-	-	diguanylate cyclase
COJIECFE_02765	3.87e-155	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Methyladenine glycosylase
COJIECFE_02766	8.76e-121	-	-	-	-	-	-	-	-
COJIECFE_02767	2.25e-209	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
COJIECFE_02768	1.58e-72	nudA	-	-	S	-	-	-	ASCH
COJIECFE_02769	2.32e-137	-	-	-	S	-	-	-	SdpI/YhfL protein family
COJIECFE_02770	2.49e-128	-	-	-	M	-	-	-	Lysin motif
COJIECFE_02771	2.18e-99	-	-	-	M	-	-	-	LysM domain
COJIECFE_02772	2.1e-99	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
COJIECFE_02773	7.8e-238	-	-	-	GM	-	-	-	Male sterility protein
COJIECFE_02774	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
COJIECFE_02775	0.0	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
COJIECFE_02776	7.47e-70	ptcB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
COJIECFE_02777	3.91e-100	pts23A	-	-	G	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
COJIECFE_02778	1.24e-194	-	-	-	K	-	-	-	Helix-turn-helix domain
COJIECFE_02779	1.21e-73	-	-	-	-	-	-	-	-
COJIECFE_02780	1.93e-205	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
COJIECFE_02781	2.03e-84	-	-	-	-	-	-	-	-
COJIECFE_02782	2.71e-135	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
COJIECFE_02783	7.43e-130	padR	-	-	K	-	-	-	Virulence activator alpha C-term
COJIECFE_02784	2.51e-103	-	-	-	T	-	-	-	Universal stress protein family
COJIECFE_02785	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
COJIECFE_02786	4.04e-241	rbsR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
COJIECFE_02787	7.82e-210	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
COJIECFE_02788	4.1e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
COJIECFE_02789	2.53e-209	rbsU	-	-	U	ko:K06216	-	ko00000,ko02000	ribose uptake protein RbsU
COJIECFE_02790	6.33e-185	srlD2	1.1.1.140	-	IQ	ko:K00068	ko00051,map00051	ko00000,ko00001,ko01000	NAD dependent epimerase/dehydratase family
COJIECFE_02791	0.0	srlM	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
COJIECFE_02792	3.33e-113	srlM1	-	-	K	-	-	-	Glucitol operon activator protein (GutM)
COJIECFE_02793	1.23e-129	srlA	-	-	G	ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system enzyme II sorbitol-specific factor
COJIECFE_02794	5.88e-233	srlE	2.7.1.198	-	G	ko:K02782,ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Sorbitol phosphotransferase enzyme II N-terminus
COJIECFE_02795	6.96e-83	pts38A	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
COJIECFE_02796	0.0	spxB	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
COJIECFE_02797	5.03e-95	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_02798	1.66e-128	pox4	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
COJIECFE_02799	3.61e-277	pox4	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
COJIECFE_02800	4.64e-255	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
COJIECFE_02801	1.07e-211	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
COJIECFE_02802	2.79e-187	ydbI	-	-	K	-	-	-	AI-2E family transporter
COJIECFE_02803	1.68e-276	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
COJIECFE_02804	1.15e-77	-	-	-	P	ko:K03297	-	ko00000,ko02000	Small Multidrug Resistance protein
COJIECFE_02805	1.97e-60	qacH	-	-	U	ko:K03297	-	ko00000,ko02000	Small Multidrug Resistance protein
COJIECFE_02806	2.94e-149	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
COJIECFE_02807	7.27e-73	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
COJIECFE_02808	1.3e-207	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
COJIECFE_02809	6.62e-133	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
COJIECFE_02811	8.03e-28	-	-	-	-	-	-	-	-
COJIECFE_02812	3.91e-124	tag2	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
COJIECFE_02813	1.37e-271	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	dihydropteroate synthase
COJIECFE_02814	3.59e-130	folQ	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
COJIECFE_02815	1.03e-314	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
COJIECFE_02816	1.04e-133	folE	2.7.6.3, 3.5.4.16	-	F	ko:K00950,ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase 1
COJIECFE_02817	1.59e-121	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
COJIECFE_02818	9.61e-84	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
COJIECFE_02819	4.08e-107	cvpA	-	-	S	-	-	-	Colicin V production protein
COJIECFE_02820	5.61e-216	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
COJIECFE_02821	8.83e-317	-	-	-	EGP	-	-	-	Major Facilitator
COJIECFE_02823	4.54e-54	-	-	-	-	-	-	-	-
COJIECFE_02824	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
COJIECFE_02825	3.82e-157	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
COJIECFE_02826	5.96e-69	yjdJ	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
COJIECFE_02827	9.43e-127	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
COJIECFE_02828	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
COJIECFE_02829	1.15e-263	yacL	-	-	S	-	-	-	domain protein
COJIECFE_02830	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COJIECFE_02831	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
COJIECFE_02832	1.35e-92	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
COJIECFE_02833	1.49e-177	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
COJIECFE_02834	6.12e-127	yacP	-	-	S	ko:K06962	-	ko00000	YacP-like NYN domain
COJIECFE_02835	3.09e-128	sigH	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Sigma-70 region 2
COJIECFE_02836	4.55e-31	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
COJIECFE_02837	1e-39	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
COJIECFE_02838	1.89e-128	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
COJIECFE_02839	1.63e-201	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
COJIECFE_02840	9.76e-93	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
COJIECFE_02841	2.69e-158	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
COJIECFE_02842	3.72e-105	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
COJIECFE_02843	3.22e-73	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
COJIECFE_02844	1.38e-49	mtsB	-	-	U	ko:K19972,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
COJIECFE_02845	2.04e-170	mntB	3.6.3.35	-	P	ko:K02074,ko:K09820,ko:K19973	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
COJIECFE_02846	1.57e-196	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
COJIECFE_02847	1.28e-253	-	-	-	K	-	-	-	Helix-turn-helix domain
COJIECFE_02848	5.21e-226	ttdA	4.2.1.32	-	C	ko:K03779	ko00630,map00630	ko00000,ko00001,ko01000	Fumarate hydratase (Fumerase)
COJIECFE_02849	2.34e-146	-	4.2.1.2, 4.2.1.32	-	C	ko:K01676,ko:K03780	ko00020,ko00620,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00630,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible hydration of fumarate to (S)- malate
COJIECFE_02850	1.76e-68	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
COJIECFE_02851	9.63e-280	-	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
COJIECFE_02852	1.23e-251	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
COJIECFE_02853	3.3e-235	aroF	2.5.1.54	-	E	ko:K03856	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	DAHP synthetase I family
COJIECFE_02854	2.25e-209	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
COJIECFE_02855	0.0	tkt2	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
COJIECFE_02856	7.79e-261	-	-	-	C	-	-	-	Belongs to the LDH2 MDH2 oxidoreductase family
COJIECFE_02857	2.46e-235	-	-	-	S	-	-	-	Membrane
COJIECFE_02858	8.17e-208	yitS	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
COJIECFE_02859	1.72e-212	mleR	-	-	K	-	-	-	LysR substrate binding domain
COJIECFE_02860	0.0	malL	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
COJIECFE_02861	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
COJIECFE_02862	1.92e-209	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	nadph quinone reductase
COJIECFE_02863	0.0	-	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
COJIECFE_02864	2.4e-230	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
COJIECFE_02865	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
COJIECFE_02866	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
COJIECFE_02867	2.07e-149	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
COJIECFE_02868	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
COJIECFE_02869	1.54e-216	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
COJIECFE_02870	1.12e-51	ygbF	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
COJIECFE_02872	2.34e-90	thiF	2.7.7.73	-	H	ko:K03148	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	ThiF family
COJIECFE_02873	4.36e-148	-	-	-	EGP	-	-	-	Transmembrane secretion effector
COJIECFE_02874	4.82e-226	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
COJIECFE_02875	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
COJIECFE_02876	1.36e-128	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
COJIECFE_02877	1.32e-244	-	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
COJIECFE_02878	1.6e-82	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
COJIECFE_02879	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Alpha-L-rhamnosidase N-terminal domain
COJIECFE_02880	0.0	nagZ	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolase family 3 N terminal domain
COJIECFE_02881	2.39e-165	-	-	-	K	ko:K03710	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
COJIECFE_02882	1.49e-112	-	2.7.1.191	-	K	ko:K02745,ko:K02794,ko:K10984	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
COJIECFE_02883	8.63e-184	-	-	-	G	ko:K02746,ko:K10985	ko00052,ko02060,map00052,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
COJIECFE_02884	1.65e-152	agaD	-	-	G	ko:K02747,ko:K02796,ko:K10986	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
COJIECFE_02885	1.63e-95	-	-	-	G	ko:K02744	ko00052,ko02060,map00052,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
COJIECFE_02886	0.0	acm2	3.2.1.17	-	NU	ko:K01185	-	ko00000,ko01000	Bacterial SH3 domain
COJIECFE_02887	4.26e-250	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
COJIECFE_02888	4.15e-78	-	-	-	-	-	-	-	-
COJIECFE_02889	1.65e-97	-	-	-	-	-	-	-	-
COJIECFE_02890	6.94e-106	-	-	-	S	-	-	-	Protein of unknown function (DUF2798)
COJIECFE_02891	6.35e-71	-	-	-	-	-	-	-	-
COJIECFE_02892	3.89e-62	-	-	-	-	-	-	-	-
COJIECFE_02893	6.69e-263	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
COJIECFE_02894	9.89e-74	ytpP	-	-	CO	-	-	-	Thioredoxin
COJIECFE_02895	4.85e-186	-	-	-	S	ko:K06889	-	ko00000	Dienelactone hydrolase family
COJIECFE_02896	3.51e-88	-	-	-	-	-	-	-	-
COJIECFE_02897	7.21e-145	-	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
COJIECFE_02898	2.31e-132	thgA3	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
COJIECFE_02899	2.49e-167	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
COJIECFE_02900	8.81e-205	-	-	-	S	-	-	-	Alpha beta hydrolase
COJIECFE_02901	5.65e-143	-	-	-	GM	-	-	-	NmrA-like family
COJIECFE_02902	1.74e-101	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2255)
COJIECFE_02903	5.72e-207	-	-	-	K	-	-	-	Transcriptional regulator
COJIECFE_02904	3.78e-221	cryZ	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	nadph quinone reductase
COJIECFE_02906	0.0	nox4	-	-	C	-	-	-	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
COJIECFE_02907	1.51e-132	desR	-	-	K	ko:K02479,ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
COJIECFE_02908	1.03e-265	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
COJIECFE_02909	1.27e-174	XK27_09830	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
COJIECFE_02910	4.17e-204	yvfR	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
COJIECFE_02912	6.64e-109	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
COJIECFE_02913	5.53e-94	-	-	-	K	-	-	-	MarR family
COJIECFE_02914	1.28e-148	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
COJIECFE_02915	1.6e-174	repA	-	-	S	-	-	-	Replication initiator protein A
COJIECFE_02916	1.14e-40	crtF	-	-	Q	-	-	-	methyltransferase
COJIECFE_02917	6.17e-68	-	-	-	Q	-	-	-	Methyltransferase
COJIECFE_02918	1.06e-163	-	-	-	L	ko:K07498	-	ko00000	Transposase IS66 family
COJIECFE_02919	1.45e-53	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
COJIECFE_02920	3.59e-26	-	-	-	-	-	-	-	-
COJIECFE_02921	4.55e-75	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
COJIECFE_02922	1.98e-50	-	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
COJIECFE_02923	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
COJIECFE_02924	1.28e-98	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Transcriptional regulator
COJIECFE_02925	3.69e-133	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
COJIECFE_02926	4.04e-43	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
COJIECFE_02927	9.1e-170	-	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
COJIECFE_02928	9.74e-100	-	3.5.1.105	-	G	ko:K03478	-	ko00000,ko01000	YdjC-like protein
COJIECFE_02929	9.94e-165	-	3.2.1.21	-	G	ko:K05350	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
COJIECFE_02930	3.37e-23	-	3.2.1.21	-	G	ko:K05350	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
COJIECFE_02932	4.93e-177	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
COJIECFE_02933	7.42e-56	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
COJIECFE_02934	5.37e-214	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
COJIECFE_02935	1.24e-210	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
COJIECFE_02936	1.18e-53	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
COJIECFE_02937	6.08e-90	cps3B	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase like family 2
COJIECFE_02938	4.06e-92	XK27_01805	-	-	M	-	-	-	Glycosyltransferase like family 2
COJIECFE_02939	9.27e-85	-	-	-	M	-	-	-	Glycosyl transferase 4-like
COJIECFE_02940	1.22e-110	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
COJIECFE_02941	2.53e-110	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
COJIECFE_02942	6.83e-47	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
COJIECFE_02943	4.51e-70	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
COJIECFE_02944	2.55e-58	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
COJIECFE_02945	3.55e-28	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
COJIECFE_02946	1.01e-176	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
COJIECFE_02947	1.37e-162	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
COJIECFE_02948	1.07e-166	epsB	-	-	M	-	-	-	biosynthesis protein
COJIECFE_02949	4.7e-52	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
COJIECFE_02952	1.38e-19	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
COJIECFE_02953	3.94e-229	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
COJIECFE_02954	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
COJIECFE_02955	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
COJIECFE_02956	1.63e-121	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
COJIECFE_02957	3.06e-205	mleR2	-	-	K	-	-	-	LysR family transcriptional regulator
COJIECFE_02958	4.39e-213	mleR	-	-	K	-	-	-	LysR family
COJIECFE_02959	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
COJIECFE_02960	2.6e-212	mleP2	-	-	S	ko:K07088	-	ko00000	Sodium Bile acid symporter family
COJIECFE_02961	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
COJIECFE_02962	4.37e-128	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
COJIECFE_02963	1.58e-88	mtsB	-	-	U	ko:K19972,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
COJIECFE_02964	5.19e-223	mntA	-	-	P	ko:K19975,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
COJIECFE_02965	1.18e-66	-	-	-	-	-	-	-	-
COJIECFE_02966	5.32e-214	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
COJIECFE_02967	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
COJIECFE_02968	8.69e-230	citR	-	-	K	-	-	-	sugar-binding domain protein
COJIECFE_02969	1.92e-264	mae	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme, NAD binding domain
COJIECFE_02970	2.16e-241	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
COJIECFE_02971	1.23e-58	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
COJIECFE_02972	7.49e-207	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
COJIECFE_02973	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
COJIECFE_02974	1.98e-232	-	-	-	L	ko:K07482	-	ko00000	PFAM Integrase, catalytic core
COJIECFE_02976	9.54e-65	-	-	-	K	-	-	-	sequence-specific DNA binding
COJIECFE_02979	1.79e-131	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
COJIECFE_02980	1.6e-291	-	-	-	S	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
COJIECFE_02981	2.43e-91	-	-	-	S	-	-	-	Pyrimidine dimer DNA glycosylase
COJIECFE_02982	2.1e-116	-	-	-	T	-	-	-	ECF transporter, substrate-specific component
COJIECFE_02983	1.06e-16	-	-	-	-	-	-	-	-
COJIECFE_02984	1.96e-21	ytgB	-	-	S	-	-	-	Transglycosylase associated protein
COJIECFE_02985	8.48e-37	katA	1.11.1.6	-	C	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Belongs to the catalase family
COJIECFE_02986	3.44e-315	katA	1.11.1.6	-	C	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Belongs to the catalase family
COJIECFE_02987	1.32e-101	nrp	-	-	K	ko:K16509	-	ko00000	ArsC family
COJIECFE_02988	7.42e-174	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
COJIECFE_02989	1.16e-125	blpH	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
COJIECFE_02990	5.81e-69	blpH	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
COJIECFE_02991	9.62e-19	-	-	-	-	-	-	-	-
COJIECFE_02992	1.51e-85	-	-	-	KOT	ko:K07813	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko01002	May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor
COJIECFE_02993	0.0	clpL	-	-	O	ko:K04086	-	ko00000,ko03110	C-terminal, D2-small domain, of ClpB protein
COJIECFE_02998	2.06e-314	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
COJIECFE_02999	4.99e-123	-	-	-	K	-	-	-	Transcriptional regulator (TetR family)
COJIECFE_03000	6.88e-71	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
COJIECFE_03001	4.19e-197	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
COJIECFE_03002	7.73e-132	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
COJIECFE_03003	1.24e-125	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
COJIECFE_03004	3.72e-124	-	-	-	M	-	-	-	Phosphotransferase enzyme family
COJIECFE_03005	1.78e-29	-	-	-	M	-	-	-	Phosphotransferase enzyme family
COJIECFE_03006	1.51e-280	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
COJIECFE_03008	3.37e-215	-	-	-	S	ko:K06904	-	ko00000	Phage capsid family
COJIECFE_03009	3.83e-145	-	-	-	S	-	-	-	Phage portal protein
COJIECFE_03011	4.43e-312	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
COJIECFE_03017	1.53e-34	-	-	-	-	-	-	-	-
COJIECFE_03019	7.81e-247	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
COJIECFE_03020	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
COJIECFE_03021	5.83e-182	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
COJIECFE_03022	4.73e-53	-	-	-	M	-	-	-	LysM domain protein
COJIECFE_03023	4.51e-236	-	-	-	L	ko:K07482	-	ko00000	Helix-turn-helix domain
COJIECFE_03024	2.97e-234	gbuA	3.6.3.32	-	E	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	glycine betaine
COJIECFE_03025	4.63e-143	gbuB	-	-	E	ko:K02001	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
COJIECFE_03026	1.85e-125	gbuC	-	-	E	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
COJIECFE_03027	9.56e-111	is18	-	-	L	-	-	-	Integrase core domain
COJIECFE_03028	0.0	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
COJIECFE_03029	0.0	traA	-	-	L	-	-	-	MobA MobL family protein
COJIECFE_03030	8.93e-34	-	-	-	-	-	-	-	-
COJIECFE_03031	5.38e-50	-	-	-	-	-	-	-	-
COJIECFE_03032	7.42e-37	-	-	-	S	-	-	-	protein conserved in bacteria
COJIECFE_03033	2.58e-37	-	-	-	-	-	-	-	-
COJIECFE_03034	1.55e-238	repA	-	-	S	-	-	-	Replication initiator protein A
COJIECFE_03036	4.33e-190	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
COJIECFE_03038	2.78e-147	rcfA	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
COJIECFE_03039	3.81e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
COJIECFE_03040	3.86e-42	copZ	-	-	P	-	-	-	Heavy-metal-associated domain
COJIECFE_03041	2.77e-124	dpsB	-	-	P	-	-	-	Belongs to the Dps family
COJIECFE_03042	1.45e-25	-	-	-	-	-	-	-	-
COJIECFE_03043	3.27e-53	yrkD	-	-	S	-	-	-	Metal-sensitive transcriptional repressor
COJIECFE_03044	1.92e-71	trxA3	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin-like domain
COJIECFE_03046	1.15e-183	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
COJIECFE_03047	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type ATPase
COJIECFE_03049	2.41e-74	-	-	-	-	-	-	-	-
COJIECFE_03050	8.48e-33	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
COJIECFE_03051	2.61e-34	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
COJIECFE_03052	3.81e-172	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
COJIECFE_03053	2.18e-101	blpH	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
COJIECFE_03054	3.8e-161	blpH	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
COJIECFE_03055	1.46e-126	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_03056	3.61e-214	-	-	-	GM	-	-	-	NmrA-like family
COJIECFE_03057	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
COJIECFE_03058	0.0	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
COJIECFE_03059	3.53e-88	repA	-	-	S	-	-	-	Replication initiator protein A
COJIECFE_03060	5.63e-123	mgtC3	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
COJIECFE_03062	6.89e-190	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
COJIECFE_03063	1.01e-64	-	-	-	S	-	-	-	Family of unknown function (DUF5388)
COJIECFE_03065	1.26e-46	-	-	-	-	-	-	-	-
COJIECFE_03067	0.000206	-	-	-	S	-	-	-	HNH endonuclease
COJIECFE_03068	1.14e-76	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
COJIECFE_03069	5.16e-09	-	3.3.1.1	-	H	ko:K01251	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	adenosylhomocysteinase activity
COJIECFE_03070	7.07e-106	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
COJIECFE_03071	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
COJIECFE_03072	8.52e-215	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Ribonucleotide reductase, small chain
COJIECFE_03073	3.29e-232	-	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Ribonucleotide reductase, small chain
COJIECFE_03074	3.95e-147	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
COJIECFE_03075	1.1e-144	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
COJIECFE_03076	1.73e-35	-	-	-	L	-	-	-	Lactococcus lactis RepB C-terminus
COJIECFE_03077	1.13e-243	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
COJIECFE_03078	1.98e-264	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
COJIECFE_03080	6.73e-12	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
COJIECFE_03081	1.41e-106	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
COJIECFE_03083	1.23e-135	-	-	-	-	-	-	-	-
COJIECFE_03084	7.78e-150	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
COJIECFE_03085	5.03e-182	-	-	-	U	ko:K10716	-	ko00000,ko02000	Ion channel
COJIECFE_03086	2.99e-218	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
COJIECFE_03087	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
COJIECFE_03088	8.39e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
COJIECFE_03089	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
COJIECFE_03090	1.06e-53	-	-	-	-	-	-	-	-
COJIECFE_03091	4e-40	-	-	-	S	-	-	-	CsbD-like
COJIECFE_03092	1.29e-54	-	-	-	S	-	-	-	transglycosylase associated protein
COJIECFE_03093	5.79e-21	-	-	-	-	-	-	-	-
COJIECFE_03094	6.16e-48	-	-	-	-	-	-	-	-
COJIECFE_03095	3.22e-78	-	-	-	L	-	-	-	Integrase
COJIECFE_03096	1.24e-31	-	-	-	L	-	-	-	Integrase
COJIECFE_03097	4.17e-55	-	-	-	K	-	-	-	prlF antitoxin for toxin YhaV_toxin
COJIECFE_03098	1.03e-77	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
COJIECFE_03099	1.09e-289	-	-	-	G	-	-	-	Polysaccharide deacetylase
COJIECFE_03100	8.74e-75	-	-	-	-	-	-	-	-
COJIECFE_03101	2.32e-200	-	-	-	L	-	-	-	Initiator Replication protein
COJIECFE_03103	5.42e-24	-	-	-	M	-	-	-	Lysin motif
COJIECFE_03104	1.43e-226	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
COJIECFE_03105	3.93e-85	-	-	-	L	-	-	-	nuclease
COJIECFE_03106	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
COJIECFE_03107	1.26e-50	-	-	-	K	-	-	-	Helix-turn-helix domain
COJIECFE_03108	6.61e-77	-	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
COJIECFE_03109	6.83e-99	-	-	-	S	ko:K06889	-	ko00000	X-Pro dipeptidyl-peptidase (S15 family)
COJIECFE_03110	1.56e-56	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
COJIECFE_03111	1.66e-214	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
COJIECFE_03112	6.54e-168	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
COJIECFE_03113	5.64e-46	-	-	-	C	-	-	-	C4-dicarboxylate transmembrane transporter activity
COJIECFE_03114	5.5e-42	-	-	-	-	-	-	-	-
COJIECFE_03115	6.46e-145	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
COJIECFE_03116	2.64e-143	-	-	-	V	ko:K07052	-	ko00000	CAAX protease self-immunity
COJIECFE_03117	2.8e-152	plnU	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
COJIECFE_03118	2.49e-120	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
COJIECFE_03119	2.02e-305	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
COJIECFE_03120	1.6e-26	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
COJIECFE_03121	7.59e-156	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
COJIECFE_03125	8.06e-179	traA	-	-	L	-	-	-	MobA MobL family protein
COJIECFE_03126	3.85e-144	traA	-	-	L	-	-	-	MobA MobL family protein
COJIECFE_03127	1.69e-37	-	-	-	-	-	-	-	-
COJIECFE_03128	9.57e-52	-	-	-	-	-	-	-	-
COJIECFE_03129	5.3e-110	-	-	-	-	-	-	-	-
COJIECFE_03130	1.99e-58	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
COJIECFE_03131	2.25e-30	repA	-	-	S	-	-	-	Replication initiator protein A
COJIECFE_03132	1.34e-42	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
COJIECFE_03133	4.01e-39	-	-	-	L	-	-	-	Transposase
COJIECFE_03136	1.07e-43	-	-	-	S	-	-	-	Phage tail tube protein
COJIECFE_03137	5.22e-28	-	-	-	-	-	-	-	-
COJIECFE_03138	3.92e-33	-	-	-	-	-	-	-	-
COJIECFE_03139	4.31e-32	-	-	-	-	-	-	-	-
COJIECFE_03140	2.22e-21	-	-	-	-	-	-	-	-
COJIECFE_03141	1.91e-120	-	-	-	S	-	-	-	Phage capsid family
COJIECFE_03142	3.2e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
COJIECFE_03143	3.16e-59	-	-	-	T	ko:K07172	-	ko00000,ko02048	Antidote-toxin recognition MazE, bacterial antitoxin
COJIECFE_03144	1.04e-136	-	-	-	L	-	-	-	Integrase
COJIECFE_03145	5.07e-40	-	-	-	-	-	-	-	-
COJIECFE_03146	7.25e-38	-	-	-	-	-	-	-	-
COJIECFE_03147	1.29e-108	is18	-	-	L	-	-	-	Integrase core domain
COJIECFE_03149	1.55e-24	-	-	-	-	-	-	-	-
COJIECFE_03150	1.99e-23	-	-	-	-	-	-	-	-
COJIECFE_03151	6.24e-72	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
COJIECFE_03152	1.72e-235	-	-	-	S	-	-	-	Phage terminase, large subunit, PBSX family
COJIECFE_03153	7.55e-137	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
COJIECFE_03155	2.66e-42	-	-	-	S	-	-	-	Phage minor capsid protein 2
COJIECFE_03158	1.35e-55	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
COJIECFE_03159	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
COJIECFE_03160	7.81e-148	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
COJIECFE_03162	2.24e-246	-	-	-	EGP	-	-	-	Major Facilitator
COJIECFE_03163	3.25e-81	ytcD	-	-	K	-	-	-	Transcriptional regulator, HxlR family
COJIECFE_03164	1.91e-44	-	-	-	C	-	-	-	Flavodoxin
COJIECFE_03165	7.53e-102	-	-	-	GM	-	-	-	NmrA-like family
COJIECFE_03166	2.62e-173	-	-	-	C	-	-	-	Aldo/keto reductase family
COJIECFE_03167	4.89e-208	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
COJIECFE_03168	1.58e-47	-	-	-	C	-	-	-	Flavodoxin
COJIECFE_03169	1.68e-184	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
COJIECFE_03171	1.06e-112	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
COJIECFE_03172	7.06e-299	cidC	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
COJIECFE_03173	5.4e-86	cidC	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
COJIECFE_03176	3.85e-172	-	-	-	S	-	-	-	Cell surface protein
COJIECFE_03177	9.86e-54	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
COJIECFE_03178	1.91e-165	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COJIECFE_03179	8.57e-227	-	-	-	EG	-	-	-	EamA-like transporter family
COJIECFE_03180	7.53e-215	mleP2	-	-	S	ko:K07088	-	ko00000	Transporter, auxin efflux carrier (AEC) family protein
COJIECFE_03181	2e-57	-	-	-	L	-	-	-	PFAM Integrase catalytic region
COJIECFE_03182	1.33e-211	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
COJIECFE_03183	7.84e-67	-	-	-	S	-	-	-	EpsG family
COJIECFE_03184	2.48e-52	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
COJIECFE_03185	8.75e-125	-	-	-	S	-	-	-	Phage Terminase
COJIECFE_03186	5.02e-128	-	-	-	S	-	-	-	Phage portal protein
COJIECFE_03187	1.15e-70	clpP	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Clp protease
COJIECFE_03188	2.81e-71	clpP	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Clp protease
COJIECFE_03189	1.24e-128	-	-	-	S	-	-	-	Phage portal protein
COJIECFE_03190	7.7e-126	-	-	-	S	-	-	-	Phage Terminase
COJIECFE_03191	4.49e-114	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
COJIECFE_03192	2e-62	-	-	-	K	-	-	-	Helix-turn-helix domain
COJIECFE_03193	2.23e-260	-	-	-	C	-	-	-	Belongs to the LDH2 MDH2 oxidoreductase family
COJIECFE_03194	9.28e-72	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
COJIECFE_03195	7.67e-120	-	-	-	C	-	-	-	nadph quinone reductase
COJIECFE_03196	6.66e-115	-	-	-	-	-	-	-	-
COJIECFE_03197	2.29e-225	-	-	-	L	-	-	-	Initiator Replication protein
COJIECFE_03198	3.67e-41	-	-	-	-	-	-	-	-
COJIECFE_03199	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
COJIECFE_03201	0.0	ybeC	-	-	E	-	-	-	amino acid
COJIECFE_03202	5.56e-148	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
COJIECFE_03203	1.53e-112	-	-	-	K	-	-	-	AraC-like ligand binding domain
COJIECFE_03204	2.21e-84	-	-	-	D	-	-	-	AAA domain
COJIECFE_03205	8.83e-06	-	-	-	-	-	-	-	-
COJIECFE_03206	4.81e-256	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
COJIECFE_03209	2.51e-95	plnP	-	-	S	-	-	-	CAAX protease self-immunity
COJIECFE_03210	4.84e-160	tnp1216	-	-	L	ko:K07498	-	ko00000	DDE domain
COJIECFE_03212	7.87e-158	zmp2	-	-	O	-	-	-	Zinc-dependent metalloprotease
COJIECFE_03213	3.42e-266	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
COJIECFE_03214	1.31e-69	fucU	5.1.3.29	-	G	ko:K02431	-	ko00000,ko01000	RbsD / FucU transport protein family
COJIECFE_03215	1.05e-48	-	2.7.1.208	-	G	ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
COJIECFE_03218	1.03e-33	-	-	-	V	-	-	-	HNH nucleases
COJIECFE_03223	3.07e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
COJIECFE_03224	4.24e-14	-	-	-	-	-	-	-	-
COJIECFE_03226	2.43e-214	-	-	-	L	-	-	-	PFAM Integrase catalytic region
COJIECFE_03227	1.11e-59	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
COJIECFE_03228	9.04e-78	-	-	-	S	-	-	-	Bacterial toxin of type II toxin-antitoxin system, YafQ
COJIECFE_03229	1.39e-110	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
COJIECFE_03230	5.3e-49	-	-	-	L	-	-	-	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
COJIECFE_03231	1.01e-89	-	-	-	L	-	-	-	manually curated
COJIECFE_03232	3.35e-88	-	-	-	L	-	-	-	manually curated
COJIECFE_03233	3.13e-99	-	-	-	L	-	-	-	Transposase DDE domain
COJIECFE_03234	3.33e-89	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
COJIECFE_03235	1.35e-38	-	-	-	-	-	-	-	-
COJIECFE_03236	3.47e-54	-	-	-	-	-	-	-	-
COJIECFE_03237	4.09e-88	-	-	-	L	-	-	-	Transposase
COJIECFE_03239	2.97e-09	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain protein