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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
CLDAFOJD_00001	2.9e-254	-	-	-	S	-	-	-	Putative S-adenosyl-L-methionine-dependent methyltransferase
CLDAFOJD_00002	9.74e-227	-	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Quinolinate synthetase A protein
CLDAFOJD_00003	7.6e-303	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CLDAFOJD_00004	0.0	-	3.2.1.52	GH20	G	ko:K01207,ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko01501,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map01501,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycoside hydrolase, family 20, catalytic core
CLDAFOJD_00006	1.53e-107	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
CLDAFOJD_00008	0.0	-	4.2.1.2	-	C	ko:K01676	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible hydration of fumarate to (S)- malate
CLDAFOJD_00009	1.49e-250	-	-	-	S	ko:K11941	-	ko00000,ko01000	transferase activity, transferring acyl groups other than amino-acyl groups
CLDAFOJD_00010	0.0	secD	-	-	U	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CLDAFOJD_00014	5.93e-261	-	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class I and II
CLDAFOJD_00015	8.43e-155	-	1.5.1.34	-	C	ko:K10679	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	Nitroreductase family
CLDAFOJD_00016	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, domain 2
CLDAFOJD_00017	1.24e-179	-	-	-	M	-	-	-	NLP P60 protein
CLDAFOJD_00018	6.77e-87	-	-	-	S	ko:K09940	-	ko00000	Domain of unknown function (DUF4870)
CLDAFOJD_00020	2.09e-76	-	-	-	C	ko:K04651	-	ko00000,ko03110	Hydrogenase/urease nickel incorporation, metallochaperone, hypA
CLDAFOJD_00021	3.4e-126	-	-	-	C	ko:K03605	-	ko00000,ko01000,ko01002	Hydrogenase maturation protease
CLDAFOJD_00022	6.49e-290	hyaC	-	-	C	ko:K03620	ko02020,map02020	ko00000,ko00001	Prokaryotic cytochrome b561
CLDAFOJD_00023	0.0	-	1.12.99.6	-	C	ko:K06281	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	Nickel-dependent hydrogenase
CLDAFOJD_00024	2.95e-299	-	1.12.99.6	-	C	ko:K06282	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	NiFe/NiFeSe hydrogenase small subunit C-terminal
CLDAFOJD_00025	0.0	-	-	-	M	ko:K07267	-	ko00000,ko02000	wide pore channel activity
CLDAFOJD_00027	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CLDAFOJD_00028	0.0	-	-	-	H	-	-	-	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CLDAFOJD_00029	0.0	-	3.4.24.3	-	NU	ko:K01387	-	ko00000,ko01000,ko01002,ko02042	translation initiation factor activity
CLDAFOJD_00030	0.0	-	-	-	M	-	-	-	Transglycosylase
CLDAFOJD_00031	2.63e-135	-	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	Peptidyl-tRNA hydrolase
CLDAFOJD_00032	5.34e-214	-	-	-	S	-	-	-	Protein of unknown function DUF58
CLDAFOJD_00033	3.82e-231	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
CLDAFOJD_00034	3.49e-216	-	3.5.1.53	-	K	ko:K12251	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Carbon-nitrogen hydrolase
CLDAFOJD_00036	2.36e-273	-	-	-	E	-	-	-	Alcohol dehydrogenase GroES-like domain
CLDAFOJD_00037	1.43e-309	-	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Seryl-tRNA synthetase N-terminal domain
CLDAFOJD_00039	4.38e-266	-	-	-	H	-	-	-	Elongator protein 3, MiaB family, Radical SAM
CLDAFOJD_00040	0.0	yidC	-	-	O	ko:K03217,ko:K06872	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	serine-type endopeptidase activity
CLDAFOJD_00041	3.72e-158	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
CLDAFOJD_00042	9.25e-128	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CLDAFOJD_00043	2.6e-259	-	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolase family 3 N terminal domain
CLDAFOJD_00044	9.81e-230	exsH	3.2.1.178, 3.2.1.18, 3.2.1.52	GH16,GH20,GH33	G	ko:K01186,ko:K12373,ko:K20830	ko00511,ko00513,ko00520,ko00531,ko00600,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00600,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko02042,ko03110	xyloglucan:xyloglucosyl transferase activity
CLDAFOJD_00045	0.0	-	-	-	I	ko:K06889,ko:K09914	-	ko00000	PFAM Prenyltransferase squalene oxidase
CLDAFOJD_00046	2.48e-315	-	1.1.1.40	-	C	ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,map00620,map00710,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Malic enzyme, NAD binding domain
CLDAFOJD_00048	0.0	menD	2.2.1.9	-	H	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
CLDAFOJD_00049	0.0	-	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class I (C) catalytic domain
CLDAFOJD_00050	2.71e-303	-	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase class I and II
CLDAFOJD_00051	2.93e-93	-	5.1.3.29	-	G	ko:K02431	-	ko00000,ko01000	RbsD / FucU transport protein family
CLDAFOJD_00052	1.25e-283	-	-	-	S	-	-	-	very-long-chain-acyl-CoA dehydrogenase activity
CLDAFOJD_00054	2.18e-295	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
CLDAFOJD_00055	5.42e-147	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
CLDAFOJD_00056	3.66e-229	-	-	-	C	-	-	-	Nitroreductase family
CLDAFOJD_00057	0.0	-	-	-	S	-	-	-	polysaccharide biosynthetic process
CLDAFOJD_00058	8.91e-123	-	-	-	C	-	-	-	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLDAFOJD_00059	1.58e-25	-	-	-	M	-	-	-	Glycosyltransferase group 2 family protein
CLDAFOJD_00060	6.17e-237	-	-	-	M	-	-	-	Glycosyl transferase, family 2
CLDAFOJD_00061	1.42e-209	-	-	-	M	-	-	-	PFAM glycosyl transferase family 2
CLDAFOJD_00062	2.67e-113	-	-	-	S	ko:K03818	-	ko00000,ko01000	maltose O-acetyltransferase activity
CLDAFOJD_00063	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_00064	4.87e-281	lsgC	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
CLDAFOJD_00065	6.11e-278	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
CLDAFOJD_00066	3.24e-250	-	-	-	M	-	-	-	Glycosyl transferases group 1
CLDAFOJD_00067	6.19e-201	-	-	-	S	-	-	-	Glycosyl transferase family 11
CLDAFOJD_00068	6.18e-262	-	-	-	M	ko:K02847,ko:K13009	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005,ko02000	-O-antigen
CLDAFOJD_00069	2e-240	-	-	-	-	-	-	-	-
CLDAFOJD_00070	9.62e-292	gtf1	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	transferase activity, transferring glycosyl groups
CLDAFOJD_00071	8.15e-285	lsgC	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
CLDAFOJD_00072	4.23e-292	lsgC	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
CLDAFOJD_00073	1.63e-187	wbyL	-	GT2	M	ko:K13002	-	ko00000,ko01000,ko01003,ko01005	transferase activity, transferring glycosyl groups
CLDAFOJD_00074	2.3e-174	-	-	-	M	-	-	-	Bacterial sugar transferase
CLDAFOJD_00075	1.11e-163	-	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	protein tyrosine phosphatase activity
CLDAFOJD_00076	0.0	gumC	-	-	DM	ko:K16554	ko05111,map05111	ko00000,ko00001,ko02000	PFAM lipopolysaccharide biosynthesis protein
CLDAFOJD_00077	5.68e-180	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	polysaccharide export
CLDAFOJD_00078	0.0	-	-	-	D	ko:K03466	-	ko00000,ko03036	Ftsk_gamma
CLDAFOJD_00080	5.35e-145	-	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLDAFOJD_00081	3.63e-135	rbr	-	-	C	-	-	-	Rubrerythrin
CLDAFOJD_00082	0.0	-	-	-	O	-	-	-	Cytochrome C assembly protein
CLDAFOJD_00084	0.0	-	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Catalase
CLDAFOJD_00085	1.01e-45	-	-	-	S	-	-	-	R3H domain
CLDAFOJD_00087	0.0	-	1.2.1.88, 1.5.5.2	-	CE	ko:K13821	ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko03000	Proline dehydrogenase
CLDAFOJD_00088	1.13e-285	-	-	-	S	-	-	-	Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units
CLDAFOJD_00089	3.74e-117	csd2	-	-	L	ko:K19118	-	ko00000,ko02048	CRISPR-associated protein, Csd2 family
CLDAFOJD_00090	5.83e-135	csd1	3.5.1.28	-	M	ko:K01447,ko:K17733,ko:K19117	-	ko00000,ko01000,ko01002,ko01011,ko02048	N-Acetylmuramoyl-L-alanine amidase
CLDAFOJD_00091	4.23e-108	-	-	-	S	ko:K19119	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas5)
CLDAFOJD_00092	2.92e-85	cas3	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	DEAD-like helicases superfamily
CLDAFOJD_00093	4.91e-59	cas4	3.1.12.1	-	L	ko:K07464	-	ko00000,ko01000,ko02048	crispr-associated protein cas4
CLDAFOJD_00094	8.36e-119	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CLDAFOJD_00095	5.87e-32	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CLDAFOJD_00098	1.71e-64	-	-	-	K	-	-	-	DNA-binding transcription factor activity
CLDAFOJD_00099	4.02e-144	-	-	-	-	-	-	-	-
CLDAFOJD_00101	0.0	-	-	-	S	-	-	-	Bacteriophage head to tail connecting protein
CLDAFOJD_00103	7.41e-181	-	-	-	-	-	-	-	-
CLDAFOJD_00105	6.23e-113	-	-	-	CO	-	-	-	cell redox homeostasis
CLDAFOJD_00106	5.03e-75	-	-	-	S	-	-	-	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CLDAFOJD_00107	2.91e-74	-	-	-	S	-	-	-	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CLDAFOJD_00108	2.62e-116	-	-	-	S	-	-	-	nitrogen fixation
CLDAFOJD_00109	3.89e-149	dedA	-	-	S	-	-	-	FtsZ-dependent cytokinesis
CLDAFOJD_00110	1.94e-268	-	2.4.1.182	GT19	M	ko:K00748	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CLDAFOJD_00111	0.0	-	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CLDAFOJD_00112	7.09e-253	-	-	-	L	-	-	-	Transposase IS200 like
CLDAFOJD_00113	0.0	-	-	-	P	ko:K03281	-	ko00000	Voltage gated chloride channel
CLDAFOJD_00114	2.17e-101	ptsN	2.7.1.202	-	G	ko:K02768,ko:K02769,ko:K02770,ko:K02806	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLDAFOJD_00117	1.59e-150	-	-	-	-	-	-	-	-
CLDAFOJD_00118	0.0	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
CLDAFOJD_00120	0.0	-	-	-	MU	ko:K18139	ko01501,ko02024,map01501,map02024	ko00000,ko00001,ko00002,ko01504,ko02000	Outer membrane efflux protein
CLDAFOJD_00121	0.0	-	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLDAFOJD_00122	2.24e-282	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLDAFOJD_00123	0.0	prlC	3.4.24.70	-	E	ko:K01414	-	ko00000,ko01000,ko01002	Peptidase family M3
CLDAFOJD_00124	0.0	-	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	LeuA allosteric (dimerisation) domain
CLDAFOJD_00126	6.78e-42	-	-	-	S	-	-	-	PurA ssDNA and RNA-binding protein
CLDAFOJD_00127	1.23e-255	-	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Iron-sulfur cluster assembly protein
CLDAFOJD_00128	0.0	-	-	-	V	ko:K03327	-	ko00000,ko02000	MatE
CLDAFOJD_00131	0.0	-	4.1.1.3	-	C	ko:K01571	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	HMGL-like
CLDAFOJD_00132	0.0	-	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Phospholipase D. Active site motifs.
CLDAFOJD_00133	5.77e-208	-	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Thymidylate synthase
CLDAFOJD_00134	5.02e-115	-	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Dihydrofolate reductase
CLDAFOJD_00135	0.0	-	-	-	V	-	-	-	AcrB/AcrD/AcrF family
CLDAFOJD_00136	4.2e-264	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Biotin-lipoyl like
CLDAFOJD_00137	1.69e-107	-	-	-	K	-	-	-	DNA-binding transcription factor activity
CLDAFOJD_00139	1.53e-241	-	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Amidohydrolase
CLDAFOJD_00140	8.17e-159	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
CLDAFOJD_00141	1.22e-290	-	-	-	L	-	-	-	helicase superfamily c-terminal domain
CLDAFOJD_00142	1.71e-110	ruvC	3.1.22.4	-	L	ko:K01159	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CLDAFOJD_00143	2.83e-121	-	-	-	-	-	-	-	-
CLDAFOJD_00144	0.0	sepA	-	-	Q	-	-	-	COG2015, Alkyl sulfatase and related hydrolases
CLDAFOJD_00145	2.21e-113	-	-	-	F	ko:K08311	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	NUDIX domain
CLDAFOJD_00146	1.21e-241	-	-	-	E	ko:K07588	-	ko00000,ko01000	ArgK protein
CLDAFOJD_00147	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycoside hydrolase, family 20, catalytic core
CLDAFOJD_00148	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycoside hydrolase, family 20, catalytic core
CLDAFOJD_00150	2.47e-116	gepA	-	-	K	-	-	-	Phage-associated protein
CLDAFOJD_00151	2.33e-173	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
CLDAFOJD_00152	3.42e-135	thiE	2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17	-	H	ko:K00788,ko:K03147,ko:K14153	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
CLDAFOJD_00153	2.64e-214	-	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
CLDAFOJD_00154	7.1e-311	-	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Cys/Met metabolism PLP-dependent enzyme
CLDAFOJD_00155	9.25e-103	-	-	-	K	-	-	-	Transcriptional regulator
CLDAFOJD_00156	1.37e-273	-	5.1.1.1	-	M	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CLDAFOJD_00157	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	defense response to virus
CLDAFOJD_00158	7.45e-231	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	maintenance of DNA repeat elements
CLDAFOJD_00159	1.51e-73	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CLDAFOJD_00160	2.32e-259	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLDAFOJD_00162	2.33e-172	-	-	-	P	ko:K10716	-	ko00000,ko02000	domain protein
CLDAFOJD_00163	0.0	htpG	-	-	O	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	Hsp90 protein
CLDAFOJD_00164	0.0	-	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	transmembrane transport
CLDAFOJD_00165	1.92e-284	-	-	-	P	ko:K03449	-	ko00000,ko02000	Major Facilitator Superfamily
CLDAFOJD_00166	6.99e-242	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Aminoacyl tRNA synthetase class II, N-terminal domain
CLDAFOJD_00167	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	B3/4 domain
CLDAFOJD_00168	1.05e-256	-	-	-	S	-	-	-	Domain of unknown function (DUF4105)
CLDAFOJD_00169	1.66e-143	-	-	-	M	-	-	-	Peptidoglycan-binding domain 1 protein
CLDAFOJD_00170	0.0	-	4.1.99.1	-	E	ko:K01667	ko00380,map00380	ko00000,ko00001,ko01000	Beta-eliminating lyase
CLDAFOJD_00171	2.01e-34	-	-	-	KLT	-	-	-	Tyrosine-protein kinase, subgroup, catalytic domain
CLDAFOJD_00172	6.59e-227	-	-	-	S	-	-	-	Protein conserved in bacteria
CLDAFOJD_00173	5.51e-211	-	-	-	S	-	-	-	ABC-type transport system involved in multi-copper enzyme maturation permease component
CLDAFOJD_00174	8.1e-160	-	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Methyladenine glycosylase
CLDAFOJD_00175	8.93e-181	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Pyrroline-5-carboxylate reductase dimerisation
CLDAFOJD_00178	1.59e-243	-	-	-	I	-	-	-	PFAM Prenyltransferase squalene oxidase
CLDAFOJD_00179	2.94e-131	-	-	-	-	-	-	-	-
CLDAFOJD_00180	0.0	-	-	-	D	-	-	-	nuclear chromosome segregation
CLDAFOJD_00181	0.0	-	5.4.99.2	-	I	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Methylmalonyl-CoA mutase
CLDAFOJD_00182	0.0	-	5.4.99.2	-	I	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Methylmalonyl-CoA mutase
CLDAFOJD_00184	1.39e-221	-	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	S-adenosylmethionine-dependent methyltransferase
CLDAFOJD_00185	9.49e-262	-	-	-	S	-	-	-	COG0790 FOG TPR repeat, SEL1 subfamily
CLDAFOJD_00186	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Phosphoglucose isomerase
CLDAFOJD_00187	0.0	-	2.7.9.1	-	G	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
CLDAFOJD_00188	1.22e-143	aat	2.3.2.6	-	O	ko:K00684	-	ko00000,ko01000	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CLDAFOJD_00189	9.37e-256	-	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	endonuclease III
CLDAFOJD_00190	6.26e-218	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CLDAFOJD_00191	0.0	-	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
CLDAFOJD_00193	3.86e-181	-	-	-	S	-	-	-	Integral membrane protein (intg_mem_TP0381)
CLDAFOJD_00194	1.12e-116	agmK	1.8.1.8	-	O	ko:K03671,ko:K03672	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko01000,ko03110	belongs to the thioredoxin family
CLDAFOJD_00196	2.52e-281	-	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Amino acid kinase family
CLDAFOJD_00197	0.0	-	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Homoserine dehydrogenase
CLDAFOJD_00199	2.34e-108	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
CLDAFOJD_00200	1.66e-171	-	-	-	S	-	-	-	Putative threonine/serine exporter
CLDAFOJD_00201	0.0	-	2.1.1.13	-	E	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	B12 binding domain
CLDAFOJD_00202	2.53e-146	-	-	-	Q	-	-	-	PA14
CLDAFOJD_00204	1.28e-55	-	-	-	S	-	-	-	Protein of unknown function (DUF4236)
CLDAFOJD_00205	2.07e-95	-	-	-	-	-	-	-	-
CLDAFOJD_00206	0.0	mmyX	5.3.1.12	-	F	ko:K01812,ko:K07149,ko:K16139	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000,ko02000	Psort location Cytoplasmic, score
CLDAFOJD_00207	4.96e-113	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Cys-tRNA(Pro) hydrolase activity
CLDAFOJD_00209	1.51e-173	-	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Glutamine amidotransferase class-I
CLDAFOJD_00210	7.35e-119	-	-	-	T	ko:K07005	-	ko00000	pyridoxamine 5'-phosphate
CLDAFOJD_00211	2.5e-170	-	-	-	S	-	-	-	Integral membrane protein (intg_mem_TP0381)
CLDAFOJD_00213	4.49e-269	-	-	-	C	-	-	-	NADH:flavin oxidoreductase / NADH oxidase family
CLDAFOJD_00214	2.09e-150	-	4.1.3.27	-	EH	ko:K01658	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Peptidase C26
CLDAFOJD_00215	7.63e-249	pabB	2.6.1.85, 4.1.3.27, 4.1.3.38	-	EH	ko:K01665,ko:K03342,ko:K13503,ko:K13950	ko00400,ko00790,ko01100,ko01110,ko01130,ko01230,map00400,map00790,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CLDAFOJD_00216	1.21e-153	-	4.1.3.38	-	E	ko:K02619	ko00790,map00790	ko00000,ko00001,ko01000	branched-chain-amino-acid transaminase activity
CLDAFOJD_00217	6.68e-314	-	5.1.3.8	-	G	ko:K01787	ko00520,map00520	ko00000,ko00001,ko01000	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
CLDAFOJD_00218	1.38e-223	-	4.1.3.3	-	EM	ko:K01639	ko00520,map00520	ko00000,ko00001,ko01000	Dihydrodipicolinate synthetase family
CLDAFOJD_00219	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_00220	2.18e-195	-	-	-	I	-	-	-	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
CLDAFOJD_00221	0.0	-	-	-	D	-	-	-	Tetratricopeptide repeat
CLDAFOJD_00222	6.21e-304	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CLDAFOJD_00223	0.0	-	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Adenylosuccinate lyase C-terminus
CLDAFOJD_00224	2.52e-102	MA20_05485	-	-	S	-	-	-	Putative bacterial sensory transduction regulator
CLDAFOJD_00225	1.12e-248	-	-	-	M	-	-	-	HlyD family secretion protein
CLDAFOJD_00226	0.0	-	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	Helix-hairpin-helix class 2 (Pol1 family) motifs
CLDAFOJD_00227	2.59e-125	-	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Phosphoribosyl transferase domain
CLDAFOJD_00229	1.59e-142	-	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
CLDAFOJD_00230	1.03e-243	-	-	-	S	-	-	-	Imelysin
CLDAFOJD_00231	0.0	-	-	-	C	-	-	-	Di-haem oxidoreductase, putative peroxidase
CLDAFOJD_00232	1.71e-264	-	-	-	J	-	-	-	Endoribonuclease L-PSP
CLDAFOJD_00233	2.65e-220	yclN	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	iron ion homeostasis
CLDAFOJD_00234	4.99e-228	fatC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	iron ion homeostasis
CLDAFOJD_00235	4.31e-180	yclP	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLDAFOJD_00236	4.88e-209	fatB	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	iron ion transport
CLDAFOJD_00237	1.74e-181	ccs1	-	-	O	ko:K07399	-	ko00000	cytochrome c biogenesis protein
CLDAFOJD_00238	0.0	-	-	-	O	-	-	-	Cytochrome C assembly protein
CLDAFOJD_00239	6.92e-235	-	-	-	S	-	-	-	Acyltransferase family
CLDAFOJD_00240	0.0	-	-	-	G	-	-	-	beta-N-acetylhexosaminidase activity
CLDAFOJD_00241	4.58e-103	-	-	-	S	-	-	-	Protein of unknown function (DUF721)
CLDAFOJD_00242	4.64e-52	-	-	-	C	-	-	-	4Fe-4S single cluster domain of Ferredoxin I
CLDAFOJD_00243	0.0	-	-	GT2	M	ko:K03820	-	ko00000,ko01000	Carbon-nitrogen hydrolase
CLDAFOJD_00244	4.47e-176	-	-	-	S	-	-	-	Phosphodiester glycosidase
CLDAFOJD_00245	5.9e-233	-	2.7.7.13	-	JM	ko:K00966	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
CLDAFOJD_00246	0.0	fabZ	3.5.1.108, 4.2.1.59	-	IM	ko:K16363	ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01005	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
CLDAFOJD_00247	1.75e-229	-	-	-	G	-	-	-	pfkB family carbohydrate kinase
CLDAFOJD_00248	2.1e-78	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLDAFOJD_00249	1.48e-275	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Iron-containing alcohol dehydrogenase
CLDAFOJD_00254	6.72e-210	-	-	-	L	ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
CLDAFOJD_00255	5.72e-271	-	2.1.1.72	-	H	ko:K07318	-	ko00000,ko01000,ko02048	PFAM D12 class N6 adenine-specific DNA methyltransferase
CLDAFOJD_00257	2.08e-240	BT0173	-	-	S	-	-	-	Psort location Cytoplasmic, score
CLDAFOJD_00258	1.06e-169	BT0174	-	-	C	ko:K04488	-	ko00000	iron-sulfur transferase activity
CLDAFOJD_00259	5.74e-200	lpxG	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase
CLDAFOJD_00261	8.29e-100	cysJ	1.8.1.2	-	C	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	hydroxylamine reductase activity
CLDAFOJD_00263	4.17e-260	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CLDAFOJD_00264	1.33e-52	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CLDAFOJD_00265	1.65e-303	-	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CLDAFOJD_00266	6.59e-315	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
CLDAFOJD_00267	2.58e-85	-	-	-	S	ko:K06940	-	ko00000	Putative zinc- or iron-chelating domain
CLDAFOJD_00270	1.18e-190	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Bacitracin resistance protein BacA
CLDAFOJD_00271	7.46e-238	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CLDAFOJD_00272	0.0	gltX	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CLDAFOJD_00273	0.0	kefA	-	-	M	ko:K05802,ko:K22051	-	ko00000,ko02000	cellular water homeostasis
CLDAFOJD_00274	1.78e-97	queF	1.7.1.13	-	S	ko:K09457	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	QueF-like protein
CLDAFOJD_00275	1.02e-159	queC	6.3.4.20	-	F	ko:K06920	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Queuosine biosynthesis protein QueC
CLDAFOJD_00276	2.24e-141	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CLDAFOJD_00277	0.0	-	-	-	J	-	-	-	Beta-Casp domain
CLDAFOJD_00278	1.23e-62	-	-	-	S	-	-	-	Protein of unknown function (DUF1232)
CLDAFOJD_00279	1.05e-160	-	-	-	S	-	-	-	Protein of unknown function (DUF4230)
CLDAFOJD_00280	6.74e-307	-	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	Isocitrate/isopropylmalate dehydrogenase
CLDAFOJD_00281	4.59e-270	-	-	-	S	-	-	-	Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units
CLDAFOJD_00282	9.72e-61	-	-	-	E	ko:K07032	-	ko00000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLDAFOJD_00284	0.0	-	-	-	C	-	-	-	Cytochrome c
CLDAFOJD_00285	1.5e-296	-	-	-	P	-	-	-	ABC-type Zn2 transport system, periplasmic component surface adhesin
CLDAFOJD_00286	6.14e-155	-	-	-	C	-	-	-	Cytochrome c
CLDAFOJD_00288	3.89e-313	-	-	-	C	ko:K00185	-	ko00000	Polysulphide reductase, NrfD
CLDAFOJD_00289	1.22e-249	-	5.4.4.2	-	HQ	ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	chorismate binding enzyme
CLDAFOJD_00290	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolases family 31
CLDAFOJD_00291	5.2e-315	-	-	-	G	-	-	-	Glycosyl transferase 4-like domain
CLDAFOJD_00292	8.59e-293	-	3.2.1.1	GH57	G	ko:K07405	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 57
CLDAFOJD_00293	8.02e-130	-	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CLDAFOJD_00294	7.4e-93	-	-	-	U	ko:K03559	-	ko00000,ko02000	Biopolymer transport protein ExbD/TolR
CLDAFOJD_00295	2.29e-136	-	-	-	U	ko:K03561	-	ko00000,ko02000	MotA/TolQ/ExbB proton channel family
CLDAFOJD_00296	4.94e-41	-	5.4.99.22	-	M	ko:K06178	-	ko00000,ko01000,ko03009	translation initiation factor activity
CLDAFOJD_00297	2.04e-218	-	5.4.99.22	-	M	ko:K06178	-	ko00000,ko01000,ko03009	translation initiation factor activity
CLDAFOJD_00298	2.18e-117	-	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-strand binding protein family
CLDAFOJD_00299	1.67e-313	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
CLDAFOJD_00300	5.55e-143	-	-	-	S	ko:K09974	-	ko00000	Domain of unknown function (DUF1287)
CLDAFOJD_00301	0.0	fhs	6.3.4.3	-	H	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Formate--tetrahydrofolate ligase
CLDAFOJD_00302	1.65e-221	-	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Ketopantoate reductase PanE/ApbA C terminal
CLDAFOJD_00303	1.65e-208	-	-	-	S	-	-	-	Tetratricopeptide repeat
CLDAFOJD_00304	8.08e-185	-	-	-	T	-	-	-	Calcineurin-like phosphoesterase superfamily domain
CLDAFOJD_00305	0.0	-	-	-	EP	ko:K13894	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLDAFOJD_00306	0.0	-	-	-	P	ko:K13895	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLDAFOJD_00307	0.0	-	-	-	E	ko:K13893	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
CLDAFOJD_00308	1.82e-229	-	-	-	EP	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
CLDAFOJD_00309	6.48e-244	-	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
CLDAFOJD_00310	1.48e-272	-	5.1.1.1	-	M	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CLDAFOJD_00312	6.56e-110	-	-	-	L	-	-	-	endonuclease activity
CLDAFOJD_00313	3.07e-208	-	-	-	EG	-	-	-	EamA-like transporter family
CLDAFOJD_00314	2.4e-285	-	-	-	Q	-	-	-	Multicopper oxidase
CLDAFOJD_00315	0.0	-	3.1.5.1	-	F	ko:K01129	ko00230,map00230	ko00000,ko00001,ko01000	Phosphohydrolase-associated domain
CLDAFOJD_00316	2.77e-186	-	-	-	O	-	-	-	Parallel beta-helix repeats
CLDAFOJD_00318	2.37e-222	-	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
CLDAFOJD_00320	1.3e-139	-	-	-	K	-	-	-	ECF sigma factor
CLDAFOJD_00321	6.54e-222	ytpP	2.7.1.180, 5.3.4.1	-	CO	ko:K01829,ko:K03671,ko:K03734,ko:K06196	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko01000,ko02000,ko03110	cell redox homeostasis
CLDAFOJD_00322	0.0	-	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	ThiC-associated domain
CLDAFOJD_00323	0.0	copA	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	E1-E2 ATPase
CLDAFOJD_00324	7.29e-60	csoR	-	-	S	ko:K21600	-	ko00000,ko03000	negative regulation of transcription, DNA-templated
CLDAFOJD_00325	2.34e-134	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
CLDAFOJD_00326	0.0	-	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	N-terminal domain of BNR-repeat neuraminidase
CLDAFOJD_00327	2.34e-123	-	-	-	-	-	-	-	-
CLDAFOJD_00328	0.0	-	-	-	G	-	-	-	Major Facilitator Superfamily
CLDAFOJD_00329	0.0	fucI	5.3.1.25, 5.3.1.3	-	G	ko:K01818	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Converts the aldose L-fucose into the corresponding ketose L-fuculose
CLDAFOJD_00331	0.0	-	2.7.1.51	-	G	ko:K00879	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	FGGY family of carbohydrate kinases, C-terminal domain
CLDAFOJD_00332	8.82e-203	-	-	-	G	-	-	-	Class II Aldolase and Adducin N-terminal domain
CLDAFOJD_00334	0.0	-	-	-	M	-	-	-	AsmA-like C-terminal region
CLDAFOJD_00335	7.48e-171	-	-	-	S	ko:K06911	-	ko00000	Pirin
CLDAFOJD_00337	2.05e-173	-	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	FtsJ-like methyltransferase
CLDAFOJD_00340	3.9e-213	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CLDAFOJD_00341	6.71e-285	-	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	S-adenosylmethionine-dependent methyltransferase
CLDAFOJD_00342	4.7e-57	-	-	-	S	ko:K06960	-	ko00000	KH domain
CLDAFOJD_00343	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_00344	0.0	-	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	RNA cap guanine-N2 methyltransferase
CLDAFOJD_00345	2.15e-216	-	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	RmlD substrate binding domain
CLDAFOJD_00346	5.51e-240	-	4.2.1.113	-	M	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Mandelate Racemase Muconate Lactonizing
CLDAFOJD_00347	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 20, domain 2
CLDAFOJD_00348	1.09e-121	-	-	-	D	-	-	-	MobA MobL family protein
CLDAFOJD_00349	2.25e-49	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLDAFOJD_00351	0.0	-	-	-	V	-	-	-	Polysaccharide biosynthesis C-terminal domain
CLDAFOJD_00352	0.0	-	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
CLDAFOJD_00353	3.52e-102	-	-	-	G	-	-	-	single-species biofilm formation
CLDAFOJD_00354	2.29e-112	-	-	-	K	ko:K13640	-	ko00000,ko03000	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CLDAFOJD_00355	4.8e-128	-	-	-	S	-	-	-	Flavodoxin-like fold
CLDAFOJD_00356	6.4e-188	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Cupin domain
CLDAFOJD_00357	2.82e-100	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
CLDAFOJD_00358	1.17e-127	-	-	-	C	-	-	-	FMN binding
CLDAFOJD_00359	3.6e-265	-	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase
CLDAFOJD_00360	5.16e-271	-	-	-	C	-	-	-	Aldo/keto reductase family
CLDAFOJD_00361	2.97e-268	-	-	-	S	ko:K06889	-	ko00000	X-Pro dipeptidyl-peptidase (S15 family)
CLDAFOJD_00362	1.93e-207	-	-	-	S	-	-	-	Aldo/keto reductase family
CLDAFOJD_00363	1.71e-239	-	1.2.7.3	-	-	ko:K00176,ko:K07138	ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200	br01601,ko00000,ko00001,ko00002,ko01000	-
CLDAFOJD_00364	5.92e-303	-	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase class I and II
CLDAFOJD_00365	2.29e-141	-	-	-	M	-	-	-	polygalacturonase activity
CLDAFOJD_00367	4.68e-192	-	-	-	KT	-	-	-	Peptidase S24-like
CLDAFOJD_00368	8.22e-290	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
CLDAFOJD_00371	5.63e-177	-	-	-	O	-	-	-	Trypsin
CLDAFOJD_00372	4.04e-240	-	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
CLDAFOJD_00373	6.2e-203	-	-	-	-	-	-	-	-
CLDAFOJD_00374	0.0	-	-	-	S	-	-	-	Sulfatase-modifying factor enzyme 1
CLDAFOJD_00375	3.57e-280	-	-	-	S	-	-	-	Tetratricopeptide repeat
CLDAFOJD_00377	2.63e-10	-	-	-	-	-	-	-	-
CLDAFOJD_00379	5.79e-62	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLDAFOJD_00380	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CLDAFOJD_00381	2.48e-228	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
CLDAFOJD_00382	4.38e-211	-	-	-	S	-	-	-	Protein of unknown function DUF58
CLDAFOJD_00383	8.06e-134	-	-	-	-	-	-	-	-
CLDAFOJD_00384	3.81e-228	-	-	-	S	-	-	-	Protein of unknown function (DUF1194)
CLDAFOJD_00386	8.51e-42	-	-	-	S	ko:K07114	-	ko00000,ko02000	von Willebrand factor (vWF) type A domain
CLDAFOJD_00387	0.0	-	-	-	S	-	-	-	Oxygen tolerance
CLDAFOJD_00388	1.36e-204	yeaE	-	-	S	-	-	-	aldo-keto reductase (NADP) activity
CLDAFOJD_00389	0.0	-	6.1.1.14	-	J	ko:K01880	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Anticodon binding domain
CLDAFOJD_00390	8.72e-155	-	-	-	S	-	-	-	DUF218 domain
CLDAFOJD_00391	1.93e-209	-	-	-	S	-	-	-	CAAX protease self-immunity
CLDAFOJD_00392	3.2e-286	-	-	-	E	ko:K10907	-	ko00000,ko01000,ko01007	Cys/Met metabolism PLP-dependent enzyme
CLDAFOJD_00393	8.26e-106	-	-	-	K	-	-	-	Lrp/AsnC ligand binding domain
CLDAFOJD_00394	0.0	-	-	-	L	-	-	-	SNF2 family N-terminal domain
CLDAFOJD_00395	8.46e-84	-	-	-	P	ko:K06195	-	ko00000	ApaG domain
CLDAFOJD_00396	7.47e-203	-	-	-	-	-	-	-	-
CLDAFOJD_00397	0.0	-	-	-	M	-	-	-	Glycosyl transferase family group 2
CLDAFOJD_00398	9e-194	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
CLDAFOJD_00399	2.2e-134	-	-	-	K	ko:K07735	-	ko00000,ko03000	Uncharacterized ACR, COG1678
CLDAFOJD_00400	1.02e-163	-	-	-	S	ko:K06997	-	ko00000	Alanine racemase, N-terminal domain
CLDAFOJD_00401	0.0	-	-	-	S	-	-	-	50S ribosome-binding GTPase
CLDAFOJD_00402	2.01e-139	-	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	5-formyltetrahydrofolate cyclo-ligase family
CLDAFOJD_00403	8.83e-209	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLDAFOJD_00404	0.0	-	-	-	E	-	-	-	Peptidase dimerisation domain
CLDAFOJD_00405	3.12e-223	hprK	-	-	T	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr)
CLDAFOJD_00406	8.72e-53	-	-	-	G	ko:K11189	-	ko00000,ko02000	PTS HPr component phosphorylation site
CLDAFOJD_00407	0.0	-	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CLDAFOJD_00408	0.0	-	-	-	P	-	-	-	Sulfatase
CLDAFOJD_00409	1.64e-223	-	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CLDAFOJD_00410	5.06e-94	-	-	-	S	ko:K02426	-	ko00000	Fe-S metabolism associated domain
CLDAFOJD_00412	0.0	-	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha amylase, C-terminal all-beta domain
CLDAFOJD_00413	1.45e-262	-	-	-	M	ko:K07271	-	ko00000,ko01000	LICD family
CLDAFOJD_00414	0.0	cobD	2.6.1.9, 2.7.7.74, 4.1.1.81	-	M	ko:K00817,ko:K04720,ko:K07281	ko00340,ko00350,ko00360,ko00400,ko00401,ko00562,ko00860,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00562,map00860,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	nucleotidyl transferase
CLDAFOJD_00415	7.48e-96	-	4.3.1.12	-	E	ko:K01750	ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230	ko00000,ko00001,ko01000	Ornithine cyclodeaminase/mu-crystallin family
CLDAFOJD_00416	0.0	-	2.7.7.15	-	H	ko:K00968	ko00440,ko00564,ko01100,ko05231,map00440,map00564,map01100,map05231	ko00000,ko00001,ko00002,ko01000	Oxidoreductase family, NAD-binding Rossmann fold
CLDAFOJD_00417	2.54e-226	-	-	-	M	ko:K07271	-	ko00000,ko01000	LICD family
CLDAFOJD_00418	3.44e-132	-	-	-	S	-	-	-	protein trimerization
CLDAFOJD_00420	8.74e-182	-	2.1.1.144, 2.1.1.197	-	FG	ko:K00598,ko:K02169	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	trans-aconitate 2-methyltransferase activity
CLDAFOJD_00421	0.0	-	2.7.7.9	-	G	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP--glucose-1-phosphate uridylyltransferase
CLDAFOJD_00422	1.01e-124	-	-	-	-	-	-	-	-
CLDAFOJD_00423	1.12e-63	-	-	-	J	-	-	-	RF-1 domain
CLDAFOJD_00424	1.16e-119	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CLDAFOJD_00425	6.64e-279	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
CLDAFOJD_00426	3.69e-297	-	-	-	S	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
CLDAFOJD_00427	3.48e-43	-	-	-	K	-	-	-	-acetyltransferase
CLDAFOJD_00428	1.15e-146	-	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CLDAFOJD_00429	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CLDAFOJD_00431	5.7e-236	-	4.2.1.24	-	H	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko04147	Delta-aminolevulinic acid dehydratase
CLDAFOJD_00433	2.04e-160	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
CLDAFOJD_00434	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
CLDAFOJD_00435	5.99e-231	-	4.1.1.35	-	M	ko:K08678	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko00002,ko01000	3-beta hydroxysteroid dehydrogenase/isomerase family
CLDAFOJD_00436	7.18e-182	-	-	-	I	-	-	-	Acyl-ACP thioesterase
CLDAFOJD_00437	0.0	-	-	-	CO	-	-	-	Thioredoxin-like
CLDAFOJD_00442	2.36e-116	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CLDAFOJD_00443	0.0	-	-	-	S	ko:K07037	-	ko00000	7TM receptor with intracellular HD hydrolase
CLDAFOJD_00444	1.22e-246	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CLDAFOJD_00445	2.73e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
CLDAFOJD_00446	4.98e-117	-	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
CLDAFOJD_00447	1.16e-78	-	-	-	FG	ko:K02503	-	ko00000,ko04147	HIT domain
CLDAFOJD_00448	3.6e-243	-	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CLDAFOJD_00449	4.45e-128	aroK	2.7.1.71	-	E	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CLDAFOJD_00450	9.56e-51	-	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Ribosomal protein S16
CLDAFOJD_00452	5.39e-13	-	-	-	E	-	-	-	LysE type translocator
CLDAFOJD_00453	1.31e-214	-	-	-	L	ko:K03733	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
CLDAFOJD_00454	1.26e-183	-	-	-	DTZ	-	-	-	EF-hand, calcium binding motif
CLDAFOJD_00455	5.64e-66	-	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit
CLDAFOJD_00456	1.39e-282	tgt	2.4.2.29	-	J	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
CLDAFOJD_00457	1.22e-150	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Putative methyltransferase
CLDAFOJD_00458	3.55e-173	-	-	-	F	-	-	-	NUDIX domain
CLDAFOJD_00459	2e-125	-	-	-	M	ko:K03642	-	ko00000	Lytic transglycolase
CLDAFOJD_00460	1.91e-204	-	3.1.26.4	-	L	ko:K03471	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HII
CLDAFOJD_00461	1.9e-62	-	-	-	L	-	-	-	bacterial (prokaryotic) histone like domain
CLDAFOJD_00467	1.43e-142	-	-	-	U	ko:K03561	-	ko00000,ko02000	MotA/TolQ/ExbB proton channel family
CLDAFOJD_00468	9.04e-172	-	2.5.1.39	-	H	ko:K03179	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CLDAFOJD_00469	3.33e-254	-	5.2.1.8	-	O	ko:K03771	-	ko00000,ko01000,ko03110	SurA N-terminal domain
CLDAFOJD_00470	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Domain of unknown function (DUF4982)
CLDAFOJD_00471	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CLDAFOJD_00472	6.2e-203	-	-	-	-	-	-	-	-
CLDAFOJD_00474	6.79e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CLDAFOJD_00475	2.19e-56	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CLDAFOJD_00476	2.36e-34	-	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L29 protein
CLDAFOJD_00477	3.42e-97	-	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CLDAFOJD_00478	5.2e-156	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CLDAFOJD_00479	4.97e-70	-	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome
CLDAFOJD_00480	4.05e-152	-	-	-	-	-	-	-	-
CLDAFOJD_00481	1.05e-58	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CLDAFOJD_00482	1.85e-203	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CLDAFOJD_00483	8.72e-58	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CLDAFOJD_00484	9.43e-132	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L4/L1 family
CLDAFOJD_00485	3.86e-149	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CLDAFOJD_00486	3.67e-65	-	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S10p/S20e
CLDAFOJD_00487	0.0	-	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CLDAFOJD_00488	2.91e-104	-	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S7p/S5e
CLDAFOJD_00489	4.16e-85	-	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S12/S23
CLDAFOJD_00490	0.0	gpmI	5.4.2.12	-	G	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	BPG-independent PGAM N-terminus (iPGM_N)
CLDAFOJD_00491	3.37e-97	-	-	-	S	ko:K07107	-	ko00000,ko01000	Thioesterase superfamily
CLDAFOJD_00492	7.39e-274	-	-	-	T	-	-	-	PAS domain
CLDAFOJD_00493	0.0	-	-	-	T	-	-	-	Bacterial regulatory protein, Fis family
CLDAFOJD_00494	0.0	-	-	-	O	-	-	-	C-terminal four TMM region of protein-O-mannosyltransferase
CLDAFOJD_00495	3.08e-52	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease VII activity
CLDAFOJD_00496	0.0	dxs	2.2.1.7	-	HI	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CLDAFOJD_00497	1.14e-182	-	-	-	S	-	-	-	Tetratricopeptide repeat
CLDAFOJD_00498	2.31e-127	-	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Recombination protein O N terminal
CLDAFOJD_00499	9.67e-251	-	-	-	S	ko:K07091	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Predicted permease YjgP/YjgQ family
CLDAFOJD_00500	0.0	der	-	-	S	ko:K03977	-	ko00000,ko03009	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
CLDAFOJD_00501	1.24e-230	-	-	-	EP	ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
CLDAFOJD_00502	6.2e-155	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	Chloramphenicol acetyltransferase
CLDAFOJD_00505	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
CLDAFOJD_00506	4.97e-168	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLDAFOJD_00507	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	TonB dependent receptor
CLDAFOJD_00508	1.46e-204	-	1.3.1.12	-	E	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydrogenase
CLDAFOJD_00510	0.0	-	-	-	EGIP	-	-	-	Phosphate acyltransferases
CLDAFOJD_00511	3.42e-111	-	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	Cytidine and deoxycytidylate deaminase zinc-binding region
CLDAFOJD_00513	1.86e-94	-	-	-	O	-	-	-	OsmC-like protein
CLDAFOJD_00514	0.0	-	-	-	CO	-	-	-	Disulphide bond corrector protein DsbC
CLDAFOJD_00515	3.47e-119	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CLDAFOJD_00516	7.58e-140	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Exonuclease
CLDAFOJD_00517	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CLDAFOJD_00518	6.51e-45	-	-	-	KT	-	-	-	Magnesium chelatase, subunit ChlI
CLDAFOJD_00521	3.76e-08	-	-	-	S	-	-	-	Ankyrin repeats (many copies)
CLDAFOJD_00523	4.24e-21	-	-	-	U	-	-	-	Protein of unknown function DUF262
CLDAFOJD_00529	8.78e-16	-	-	-	-	-	-	-	-
CLDAFOJD_00531	4.69e-79	rsfS	-	-	S	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CLDAFOJD_00532	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLDAFOJD_00534	2.6e-257	-	-	-	S	-	-	-	AAA domain, putative AbiEii toxin, Type IV TA system
CLDAFOJD_00535	4.36e-200	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Enoyl-CoA hydratase/isomerase
CLDAFOJD_00538	1.07e-301	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	efflux transmembrane transporter activity
CLDAFOJD_00542	9.85e-147	-	-	-	V	-	-	-	ATPases associated with a variety of cellular activities
CLDAFOJD_00546	0.0	-	-	-	V	-	-	-	ABC-2 type transporter
CLDAFOJD_00547	8.38e-98	-	-	-	-	-	-	-	-
CLDAFOJD_00548	9e-192	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
CLDAFOJD_00549	0.0	-	-	-	S	-	-	-	Fungal chitosanase of glycosyl hydrolase group 75
CLDAFOJD_00550	9.28e-219	-	2.5.1.21	-	I	ko:K00801	ko00100,ko00909,ko01100,ko01110,ko01130,map00100,map00909,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko01006	Squalene/phytoene synthase
CLDAFOJD_00551	0.0	-	-	-	KT	ko:K02584	ko02020,map02020	ko00000,ko00001,ko03000	Bacterial regulatory protein, Fis family
CLDAFOJD_00552	0.0	-	-	-	P	ko:K03281	-	ko00000	Voltage gated chloride channel
CLDAFOJD_00554	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	PFAM Glycoside hydrolase, family 20, catalytic core
CLDAFOJD_00556	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_00557	0.0	-	4.1.1.15	-	E	ko:K01580	ko00250,ko00410,ko00430,ko00650,ko01100,ko01110,ko01120,ko02024,ko04727,ko04940,map00250,map00410,map00430,map00650,map01100,map01110,map01120,map02024,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Pyridoxal-dependent decarboxylase conserved domain
CLDAFOJD_00558	1.74e-140	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
CLDAFOJD_00559	0.0	-	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase alpha chain like domain
CLDAFOJD_00560	4.25e-238	pyrD	1.3.5.2	-	F	ko:K00254	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Dihydroorotate dehydrogenase
CLDAFOJD_00561	4.7e-156	-	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Thiamine monophosphate synthase
CLDAFOJD_00562	1.1e-159	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLDAFOJD_00563	1.63e-164	-	-	-	CO	-	-	-	Thioredoxin-like
CLDAFOJD_00564	0.0	-	-	-	C	-	-	-	Cytochrome c554 and c-prime
CLDAFOJD_00565	1.38e-310	-	-	-	S	-	-	-	PFAM CBS domain containing protein
CLDAFOJD_00566	9.05e-313	tlyC	-	-	S	ko:K03699	-	ko00000,ko02042	PFAM CBS domain containing protein
CLDAFOJD_00567	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
CLDAFOJD_00568	3.01e-49	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal_S15
CLDAFOJD_00569	8.11e-152	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
CLDAFOJD_00570	2.36e-213	-	-	-	D	ko:K19234,ko:K19236	ko01503,map01503	ko00000,ko00001,ko01002,ko01011	ErfK ybiS ycfS ynhG family protein
CLDAFOJD_00571	0.0	-	-	-	S	-	-	-	Terminase
CLDAFOJD_00574	7.54e-201	-	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CLDAFOJD_00575	1.04e-144	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CLDAFOJD_00576	9.86e-168	-	-	-	M	-	-	-	Peptidase family M23
CLDAFOJD_00577	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	PFAM coagulation factor 5 8 type domain protein
CLDAFOJD_00579	1.33e-174	-	-	-	NU	-	-	-	Prepilin-type N-terminal cleavage methylation domain
CLDAFOJD_00581	9.93e-180	rph	2.7.7.56	-	J	ko:K00989	-	ko00000,ko01000,ko03016	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CLDAFOJD_00582	0.0	-	-	-	S	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
CLDAFOJD_00583	0.0	-	-	-	G	-	-	-	beta-N-acetylhexosaminidase activity
CLDAFOJD_00584	1.7e-153	-	6.3.3.3	-	H	ko:K01935	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	AAA domain
CLDAFOJD_00586	8.41e-202	-	-	-	S	-	-	-	DisA bacterial checkpoint controller nucleotide-binding
CLDAFOJD_00587	1.19e-57	-	-	-	-	-	-	-	-
CLDAFOJD_00588	4.78e-63	-	-	-	-	-	-	-	-
CLDAFOJD_00589	6.38e-151	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLDAFOJD_00590	3.42e-196	panC	6.3.2.1	-	H	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CLDAFOJD_00591	1.48e-120	-	-	-	M	ko:K06142	-	ko00000	Outer membrane protein (OmpH-like)
CLDAFOJD_00592	2.31e-187	lpxD	2.3.1.191	-	M	ko:K02536	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CLDAFOJD_00593	1.4e-195	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLDAFOJD_00594	1.63e-189	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLDAFOJD_00595	6.06e-251	-	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	NMT1/THI5 like
CLDAFOJD_00597	1.26e-222	hyl	2.3.1.48, 3.2.1.169, 3.2.1.35	GH84	G	ko:K01197,ko:K15719	ko00531,ko01100,ko04931,map00531,map01100,map04931	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylhexosaminidase activity
CLDAFOJD_00598	1.03e-116	-	3.1.3.82, 3.1.3.83	-	E	ko:K03273	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Polynucleotide kinase 3 phosphatase
CLDAFOJD_00599	8.25e-131	-	5.3.1.28	-	G	ko:K03271	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	SIS domain
CLDAFOJD_00600	0.0	-	2.7.1.167, 2.7.7.70	-	M	ko:K03272	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	pfkB family carbohydrate kinase
CLDAFOJD_00601	1.06e-44	-	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S21
CLDAFOJD_00602	1.05e-311	hemL	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-III
CLDAFOJD_00603	3.99e-258	-	-	-	S	-	-	-	ankyrin repeats
CLDAFOJD_00604	0.0	-	-	-	EGP	-	-	-	Sugar (and other) transporter
CLDAFOJD_00605	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_00606	0.0	glnS	6.1.1.18	-	J	ko:K01886	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class I (E and Q), anti-codon binding domain
CLDAFOJD_00607	4.76e-288	-	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase II
CLDAFOJD_00608	4.95e-103	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
CLDAFOJD_00609	9.48e-205	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CLDAFOJD_00610	1.1e-197	-	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	SRP54-type protein, GTPase domain
CLDAFOJD_00611	8.76e-261	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Elongator protein 3, MiaB family, Radical SAM
CLDAFOJD_00612	0.0	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	DnaB-like helicase C terminal domain
CLDAFOJD_00613	3.22e-182	-	-	-	U	ko:K20276	ko02024,map02024	ko00000,ko00001	domain, Protein
CLDAFOJD_00614	6.87e-153	-	-	-	O	-	-	-	methyltransferase activity
CLDAFOJD_00615	5.92e-289	-	3.5.1.42	-	S	ko:K03742	ko00760,map00760	ko00000,ko00001,ko01000	Competence-damaged protein
CLDAFOJD_00616	0.0	-	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Pyruvate kinase, barrel domain
CLDAFOJD_00617	1.07e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLDAFOJD_00621	5.71e-191	-	-	-	E	-	-	-	haloacid dehalogenase-like hydrolase
CLDAFOJD_00622	4.36e-142	-	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S4/S9 N-terminal domain
CLDAFOJD_00623	2.11e-121	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CLDAFOJD_00624	1.11e-79	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CLDAFOJD_00625	3.9e-270	-	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Domain of unknown function (DUF1730)
CLDAFOJD_00626	2.39e-224	-	-	-	M	ko:K07276	-	ko00000	Mitochondrial fission ELM1
CLDAFOJD_00627	2.45e-268	-	-	-	M	-	-	-	Glycosyl transferase 4-like
CLDAFOJD_00628	4.22e-267	-	-	-	LU	ko:K04096	-	ko00000	DNA recombination-mediator protein A
CLDAFOJD_00629	4.07e-217	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
CLDAFOJD_00630	1.11e-261	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CLDAFOJD_00631	7e-268	gcvT	2.1.2.10	-	E	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Aminomethyltransferase folate-binding domain
CLDAFOJD_00632	6.67e-86	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
CLDAFOJD_00633	0.0	gcvP	1.4.4.2	-	E	ko:K00281	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CLDAFOJD_00635	6.93e-147	-	-	-	L	-	-	-	Membrane
CLDAFOJD_00636	0.0	-	-	-	P	ko:K01138	-	ko00000,ko01000	PA14 domain
CLDAFOJD_00637	0.0	-	3.6.4.13	-	L	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DbpA RNA binding domain
CLDAFOJD_00638	1.84e-177	-	-	-	-	-	-	-	-
CLDAFOJD_00639	0.0	-	3.1.1.53	-	E	ko:K05970	-	ko00000,ko01000	Carbohydrate esterase, sialic acid-specific acetylesterase
CLDAFOJD_00640	1.72e-243	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
CLDAFOJD_00641	1.84e-105	-	-	-	S	ko:K15977	-	ko00000	DoxX
CLDAFOJD_00642	4.07e-246	-	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	AIR synthase related protein, N-terminal domain
CLDAFOJD_00643	0.0	-	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CLDAFOJD_00644	1.26e-139	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
CLDAFOJD_00646	2.34e-208	-	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
CLDAFOJD_00647	1.31e-81	-	-	-	DJ	-	-	-	Addiction module toxin, RelE StbE family
CLDAFOJD_00648	8.37e-126	-	4.1.1.36	-	H	ko:K01598	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Flavoprotein
CLDAFOJD_00650	2.31e-259	-	-	-	M	-	-	-	Peptidase family M23
CLDAFOJD_00651	0.0	-	-	-	S	-	-	-	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
CLDAFOJD_00652	0.0	-	-	-	L	-	-	-	Polyphosphate kinase 2 (PPK2)
CLDAFOJD_00653	2.48e-173	-	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
CLDAFOJD_00654	1.94e-104	-	-	-	K	ko:K03826	-	ko00000,ko01000	acetyltransferase
CLDAFOJD_00655	3.38e-279	-	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class-V
CLDAFOJD_00656	2.4e-160	-	6.3.2.5	-	H	ko:K21977	ko00770,map00770	ko00000,ko00001,ko00002,ko01000	DNA / pantothenate metabolism flavoprotein
CLDAFOJD_00657	3.37e-272	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CLDAFOJD_00658	1.98e-232	-	-	-	S	-	-	-	Aspartyl protease
CLDAFOJD_00659	1.18e-309	-	2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15	GT30	M	ko:K02527	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
CLDAFOJD_00660	3.35e-131	-	-	-	L	-	-	-	Conserved hypothetical protein 95
CLDAFOJD_00661	1.36e-175	-	-	-	-	-	-	-	-
CLDAFOJD_00663	2.58e-225	-	-	-	S	-	-	-	Polyphosphate kinase 2 (PPK2)
CLDAFOJD_00664	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_00665	0.0	-	-	-	M	-	-	-	Parallel beta-helix repeats
CLDAFOJD_00667	3.73e-200	-	-	-	S	ko:K06889	-	ko00000	alpha beta
CLDAFOJD_00668	3.34e-106	-	-	-	S	ko:K06925	-	ko00000,ko03016	Threonylcarbamoyl adenosine biosynthesis protein TsaE
CLDAFOJD_00669	1.93e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal prokaryotic L21 protein
CLDAFOJD_00670	2.14e-57	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L27 protein
CLDAFOJD_00671	6.78e-100	-	-	-	P	ko:K09825	-	ko00000,ko03000	Ferric uptake regulator family
CLDAFOJD_00672	1.02e-178	-	-	-	O	ko:K09013	-	ko00000,ko02000	ATPases associated with a variety of cellular activities
CLDAFOJD_00673	0.0	-	-	-	O	ko:K09014	-	ko00000	Uncharacterized protein family (UPF0051)
CLDAFOJD_00674	2.04e-293	-	-	-	O	ko:K09015	-	ko00000	Uncharacterized protein family (UPF0051)
CLDAFOJD_00675	0.0	-	-	-	M	-	-	-	Bacterial membrane protein, YfhO
CLDAFOJD_00676	0.0	-	-	-	P	-	-	-	Sulfatase
CLDAFOJD_00677	1.77e-234	-	2.8.1.6	-	H	ko:K01012	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Biotin and Thiamin Synthesis associated domain
CLDAFOJD_00678	0.0	-	2.6.1.62	-	H	ko:K00833	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-III
CLDAFOJD_00681	1.93e-77	-	-	-	P	ko:K03297,ko:K11741	-	ko00000,ko02000	Multidrug Resistance protein
CLDAFOJD_00682	1.08e-73	-	-	-	P	ko:K03297,ko:K11741	-	ko00000,ko02000	Multidrug Resistance protein
CLDAFOJD_00683	1.95e-222	-	-	-	M	-	-	-	Glycosyl transferase family 2
CLDAFOJD_00684	2.98e-115	flmH	2.3.1.57	-	J	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLDAFOJD_00685	5.18e-283	-	2.6.1.59	-	M	ko:K02805	-	ko00000,ko01000,ko01007	DegT/DnrJ/EryC1/StrS aminotransferase family
CLDAFOJD_00686	4.27e-275	-	-	-	S	-	-	-	COGs COG4299 conserved
CLDAFOJD_00687	8.17e-124	sprT	-	-	K	-	-	-	SprT-like family
CLDAFOJD_00688	1.38e-139	-	-	-	-	-	-	-	-
CLDAFOJD_00689	5.04e-90	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
CLDAFOJD_00690	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CLDAFOJD_00691	4.5e-201	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CLDAFOJD_00692	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CLDAFOJD_00693	1.59e-86	-	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	ATP synthase delta (OSCP) subunit
CLDAFOJD_00694	4.38e-78	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	ATP synthase B/B' CF(0)
CLDAFOJD_00695	1.65e-11	-	-	-	S	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	PFAM H transporting two-sector ATPase C subunit
CLDAFOJD_00696	6.27e-219	-	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	ATP synthase A chain
CLDAFOJD_00697	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_00698	0.0	-	3.4.16.4	-	M	ko:K05515	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein dimerisation domain
CLDAFOJD_00699	5.1e-153	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
CLDAFOJD_00700	2.55e-270	-	-	-	S	-	-	-	COGs COG4299 conserved
CLDAFOJD_00701	0.0	-	-	-	G	-	-	-	Raffinose synthase or seed imbibition protein Sip1
CLDAFOJD_00703	4.09e-218	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CLDAFOJD_00704	1.74e-224	-	-	-	-	-	-	-	-
CLDAFOJD_00705	8.92e-111	-	-	-	U	-	-	-	response to pH
CLDAFOJD_00706	9.39e-183	-	-	-	H	-	-	-	ThiF family
CLDAFOJD_00707	6.8e-224	-	5.3.1.13	-	M	ko:K06041	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	SIS domain
CLDAFOJD_00708	4.7e-193	-	-	-	-	-	-	-	-
CLDAFOJD_00709	1.31e-290	-	4.2.1.129, 5.4.99.17	-	I	ko:K06045	ko00909,ko01110,map00909,map01110	ko00000,ko00001,ko01000	PFAM Prenyltransferase squalene oxidase
CLDAFOJD_00710	1.06e-109	-	-	-	S	ko:K15977	-	ko00000	DoxX
CLDAFOJD_00711	1.34e-201	-	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Serine acetyltransferase, N-terminal
CLDAFOJD_00712	1.73e-307	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CLDAFOJD_00713	1.71e-179	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CLDAFOJD_00714	0.0	-	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CLDAFOJD_00715	0.0	-	-	-	K	-	-	-	Transcription elongation factor, N-terminal
CLDAFOJD_00716	1.89e-166	-	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	SAICAR synthetase
CLDAFOJD_00717	5.55e-116	-	-	-	-	-	-	-	-
CLDAFOJD_00718	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
CLDAFOJD_00719	1.3e-177	-	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	CobB/CobQ-like glutamine amidotransferase domain
CLDAFOJD_00721	2.24e-263	-	-	-	G	-	-	-	M42 glutamyl aminopeptidase
CLDAFOJD_00723	0.0	lacZ_17	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase activity
CLDAFOJD_00724	5.06e-236	-	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Actin
CLDAFOJD_00725	0.0	-	-	-	J	ko:K08301	-	ko00000,ko01000,ko03009,ko03019	Ribonuclease E/G family
CLDAFOJD_00726	7.71e-278	-	-	-	K	-	-	-	sequence-specific DNA binding
CLDAFOJD_00727	1.28e-193	-	-	-	-	-	-	-	-
CLDAFOJD_00728	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
CLDAFOJD_00729	5.28e-100	exbD2	-	-	U	ko:K03559	-	ko00000,ko02000	biopolymer transport protein
CLDAFOJD_00730	3.19e-111	aglS	-	-	U	ko:K03559	-	ko00000,ko02000	biopolymer transport protein
CLDAFOJD_00731	9.91e-171	-	-	-	U	ko:K03561	-	ko00000,ko02000	MotA/TolQ/ExbB proton channel family
CLDAFOJD_00732	2.15e-151	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CLDAFOJD_00733	2.14e-148	-	-	-	S	-	-	-	3D domain
CLDAFOJD_00734	1.62e-227	-	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil DNA glycosylase superfamily
CLDAFOJD_00735	2.27e-175	-	4.1.1.48	-	E	ko:K01609	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Indole-3-glycerol phosphate synthase
CLDAFOJD_00737	2.8e-81	-	-	-	L	ko:K07460	-	ko00000	Uncharacterised protein family UPF0102
CLDAFOJD_00738	2.06e-150	-	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HII
CLDAFOJD_00739	4.77e-310	-	-	-	S	-	-	-	PFAM CBS domain containing protein
CLDAFOJD_00740	8.43e-59	-	-	-	S	-	-	-	Zinc ribbon domain
CLDAFOJD_00741	2.79e-54	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CLDAFOJD_00743	2.9e-316	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Arginosuccinate synthase
CLDAFOJD_00744	9.39e-117	-	3.1.6.8	-	P	ko:K01134	ko00600,ko04142,map00600,map04142	ko00000,ko00001,ko01000	COG3119 Arylsulfatase A
CLDAFOJD_00745	2.71e-300	-	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	16S rRNA methyltransferase RsmB/F
CLDAFOJD_00746	4.82e-178	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CLDAFOJD_00747	9.08e-165	-	-	-	NU	-	-	-	Prokaryotic N-terminal methylation motif
CLDAFOJD_00748	1.3e-143	-	-	-	-	-	-	-	-
CLDAFOJD_00749	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	Sulfatase
CLDAFOJD_00753	1.67e-100	-	-	-	S	ko:K07107	-	ko00000,ko01000	Thioesterase-like superfamily
CLDAFOJD_00754	3.42e-180	-	-	-	S	-	-	-	competence protein
CLDAFOJD_00755	2.92e-70	-	-	-	-	-	-	-	-
CLDAFOJD_00756	4.15e-191	-	3.6.1.66	-	S	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	MazG nucleotide pyrophosphohydrolase domain
CLDAFOJD_00757	3.68e-75	-	-	-	-	-	-	-	-
CLDAFOJD_00758	3.18e-264	-	3.1.13.5	-	J	ko:K03684	-	ko00000,ko01000,ko03016	3'-5' exonuclease
CLDAFOJD_00759	4.56e-139	-	-	-	S	ko:K07164	-	ko00000	C4-type zinc ribbon domain
CLDAFOJD_00760	1.5e-296	lpxK	2.7.1.130	-	M	ko:K00912	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
CLDAFOJD_00761	0.0	-	-	-	S	ko:K07263	-	ko00000,ko01000,ko01002	Insulinase (Peptidase family M16)
CLDAFOJD_00762	7.99e-78	queH	1.17.99.6	-	C	ko:K09765	-	ko00000,ko01000,ko03016	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CLDAFOJD_00763	7.12e-152	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
CLDAFOJD_00764	3.01e-133	metF	1.5.1.20	-	C	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	reductase
CLDAFOJD_00765	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CLDAFOJD_00766	0.000103	-	-	-	S	-	-	-	Entericidin EcnA/B family
CLDAFOJD_00768	1.3e-206	-	1.4.1.16	-	S	ko:K03340	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
CLDAFOJD_00769	3.4e-173	-	-	-	S	-	-	-	peptidoglycan biosynthetic process
CLDAFOJD_00770	1.09e-135	-	-	-	F	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
CLDAFOJD_00780	0.0	-	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
CLDAFOJD_00781	1.37e-129	-	-	-	D	ko:K06287	-	ko00000	Maf-like protein
CLDAFOJD_00782	1.08e-289	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CLDAFOJD_00784	0.0	-	-	-	KLT	-	-	-	Protein tyrosine kinase
CLDAFOJD_00785	0.0	-	-	-	GK	-	-	-	carbohydrate kinase activity
CLDAFOJD_00786	4.34e-202	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CLDAFOJD_00787	5.49e-206	thiL	2.7.4.16	-	H	ko:K00946	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CLDAFOJD_00788	0.0	-	-	-	I	-	-	-	Acetyltransferase (GNAT) domain
CLDAFOJD_00789	2.8e-143	-	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Cytidylate kinase
CLDAFOJD_00790	8.17e-147	-	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Phosphate acyltransferases
CLDAFOJD_00791	9.06e-259	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CLDAFOJD_00792	3.75e-121	actI	1.5.1.36	-	S	ko:K00484	ko00350,ko00740,ko01100,ko01120,ko01220,map00350,map00740,map01100,map01120,map01220	ko00000,ko00001,ko01000	FMN binding
CLDAFOJD_00793	3.86e-162	rnc	3.1.26.3	-	K	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CLDAFOJD_00794	0.0	-	-	-	P	ko:K07221	-	ko00000,ko02000	Phosphate-selective porin O and P
CLDAFOJD_00795	1.39e-257	xerD1	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
CLDAFOJD_00797	2.11e-272	-	-	-	S	-	-	-	regulation of ryanodine-sensitive calcium-release channel activity
CLDAFOJD_00799	3.73e-229	-	-	-	M	-	-	-	lytic endotransglycosylase activity
CLDAFOJD_00800	3.86e-18	-	-	-	-	-	-	-	-
CLDAFOJD_00801	3.77e-181	-	-	-	S	-	-	-	Endonuclease/Exonuclease/phosphatase family
CLDAFOJD_00802	4.83e-163	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Tetrapyrrole (Corrin/Porphyrin) Methylases
CLDAFOJD_00803	3.06e-115	-	-	-	S	-	-	-	Lipopolysaccharide-assembly
CLDAFOJD_00804	1.18e-170	-	-	-	S	ko:K05807	-	ko00000,ko02000	Outer membrane lipoprotein
CLDAFOJD_00805	4.98e-117	hisI	3.5.4.19	-	E	ko:K01496	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Phosphoribosyl-AMP cyclohydrolase
CLDAFOJD_00806	5.17e-223	-	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III, delta subunit
CLDAFOJD_00807	1.2e-121	-	3.2.2.28	-	L	ko:K03649	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	G/U mismatch-specific uracil-DNA glycosylase activity
CLDAFOJD_00808	1.03e-195	-	-	-	-	-	-	-	-
CLDAFOJD_00809	0.0	carB	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CLDAFOJD_00810	1.56e-137	-	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	Serine/threonine phosphatases, family 2C, catalytic domain
CLDAFOJD_00812	5.06e-182	-	-	-	Q	-	-	-	methyltransferase activity
CLDAFOJD_00814	0.0	-	6.3.5.1	-	H	ko:K01950	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	NAD synthase
CLDAFOJD_00815	2.28e-79	-	-	-	P	ko:K11741	-	ko00000,ko02000	Small Multidrug Resistance protein
CLDAFOJD_00817	0.0	-	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	exo-alpha-(2->6)-sialidase activity
CLDAFOJD_00818	7.72e-279	-	-	-	K	-	-	-	Periplasmic binding protein-like domain
CLDAFOJD_00819	0.0	-	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	BNR/Asp-box repeat
CLDAFOJD_00820	0.0	-	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	transmembrane transport
CLDAFOJD_00822	1.59e-37	-	-	-	KLT	-	-	-	Protein kinase domain
CLDAFOJD_00826	1.57e-08	-	-	-	S	ko:K06867	-	ko00000	Ankyrin repeat protein
CLDAFOJD_00831	1.57e-53	draG	3.2.2.24	-	O	ko:K05521	-	ko00000,ko01000	ADP-ribosylglycohydrolase
CLDAFOJD_00832	6.01e-46	-	-	-	L	-	-	-	AAA ATPase domain
CLDAFOJD_00835	4.39e-244	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CLDAFOJD_00836	9.5e-239	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CLDAFOJD_00837	4.5e-283	-	1.8.1.2	-	P	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CLDAFOJD_00838	1.1e-256	MA20_42350	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	Glycosyl transferase, family 2
CLDAFOJD_00840	9.28e-249	-	-	-	M	-	-	-	Glycosyl transferase, family 2
CLDAFOJD_00841	8.4e-39	-	-	-	H	-	-	-	PFAM glycosyl transferase family 8
CLDAFOJD_00842	2.11e-154	-	-	-	H	-	-	-	PFAM glycosyl transferase family 8
CLDAFOJD_00844	0.0	-	-	-	S	-	-	-	polysaccharide biosynthetic process
CLDAFOJD_00845	3.32e-288	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
CLDAFOJD_00846	5.71e-284	-	-	-	M	-	-	-	Glycosyl transferases group 1
CLDAFOJD_00847	4.35e-143	-	-	-	S	-	-	-	Hexapeptide repeat of succinyl-transferase
CLDAFOJD_00848	4.96e-271	-	-	-	S	ko:K11941	-	ko00000,ko01000	transferase activity, transferring acyl groups other than amino-acyl groups
CLDAFOJD_00849	6.92e-183	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
CLDAFOJD_00850	9.9e-202	miaA	2.5.1.75	-	J	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CLDAFOJD_00851	1.11e-262	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CLDAFOJD_00852	2.41e-315	mnmE	-	-	J	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CLDAFOJD_00853	1.67e-08	-	-	-	S	-	-	-	Mac 1
CLDAFOJD_00854	0.0	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CLDAFOJD_00855	1.89e-35	-	-	-	-	-	-	-	-
CLDAFOJD_00856	0.0	-	-	-	S	-	-	-	Virulence-associated protein E
CLDAFOJD_00857	6.57e-313	-	-	-	D	-	-	-	MobA MobL family protein
CLDAFOJD_00858	4.5e-61	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
CLDAFOJD_00859	1.63e-43	-	-	-	-	-	-	-	-
CLDAFOJD_00860	2.77e-45	-	-	-	K	-	-	-	Helix-turn-helix domain
CLDAFOJD_00861	1.87e-270	-	-	-	-	-	-	-	-
CLDAFOJD_00862	3.28e-63	-	-	-	O	-	-	-	Torsin
CLDAFOJD_00864	8.58e-45	-	-	-	-	-	-	-	-
CLDAFOJD_00865	4.42e-235	-	-	-	V	-	-	-	HNH endonuclease
CLDAFOJD_00866	0.0	-	-	-	L	-	-	-	C-5 cytosine-specific DNA methylase
CLDAFOJD_00869	2.82e-154	-	-	-	S	-	-	-	UPF0126 domain
CLDAFOJD_00870	5.27e-189	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
CLDAFOJD_00871	4.54e-105	-	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
CLDAFOJD_00872	0.0	rsmH	2.1.1.199	-	M	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CLDAFOJD_00874	0.0	-	3.4.16.4	-	M	ko:K03587	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011,ko03036	Penicillin-binding Protein dimerisation domain
CLDAFOJD_00875	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLDAFOJD_00876	0.0	-	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Mur ligase middle domain
CLDAFOJD_00877	1.99e-261	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLDAFOJD_00878	1.79e-312	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CLDAFOJD_00879	9.57e-159	mltD	-	CBM50	M	ko:K08307,ko:K12204,ko:K19224	-	ko00000,ko01000,ko01002,ko01011,ko02044	LysM domain
CLDAFOJD_00880	1.33e-277	-	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Cell cycle protein
CLDAFOJD_00881	4.56e-266	-	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CLDAFOJD_00882	0.0	murB	-	-	M	-	-	-	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
CLDAFOJD_00883	6.85e-227	ddl	6.3.2.4	-	M	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	D-ala D-ala ligase N-terminus
CLDAFOJD_00884	1.8e-216	-	-	-	M	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	POTRA domain, FtsQ-type
CLDAFOJD_00885	1.15e-238	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CLDAFOJD_00886	1.11e-237	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	Ami_3
CLDAFOJD_00887	7.14e-141	-	2.3.1.181	-	H	ko:K03801	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Biotin/lipoate A/B protein ligase family
CLDAFOJD_00888	0.0	-	4.2.1.33, 4.2.1.35	-	E	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Aconitase family (aconitate hydratase)
CLDAFOJD_00889	1.53e-146	-	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Aconitase C-terminal domain
CLDAFOJD_00890	4.99e-274	-	-	-	-	-	-	-	-
CLDAFOJD_00891	0.0	-	-	-	O	-	-	-	Trypsin
CLDAFOJD_00892	0.0	-	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
CLDAFOJD_00893	2.93e-280	-	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	3-dehydroquinate synthase
CLDAFOJD_00895	2.65e-174	-	-	-	E	-	-	-	ATPases associated with a variety of cellular activities
CLDAFOJD_00896	2.05e-198	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CLDAFOJD_00897	5.88e-163	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S2
CLDAFOJD_00898	2.59e-170	cbiX	4.99.1.3	-	S	ko:K03795	ko00860,ko01100,ko01120,map00860,map01100,map01120	ko00000,ko00001,ko01000	sirohydrochlorin cobaltochelatase activity
CLDAFOJD_00899	6.68e-198	-	2.5.1.55	-	M	ko:K01627	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	DAHP synthetase I family
CLDAFOJD_00902	6.31e-171	-	-	-	S	ko:K06861	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
CLDAFOJD_00903	5.39e-220	-	-	-	E	-	-	-	Phosphoserine phosphatase
CLDAFOJD_00904	0.0	-	6.3.2.45	-	M	ko:K02558	-	ko00000,ko01000	Mur ligase family, catalytic domain
CLDAFOJD_00905	7.64e-307	-	-	-	M	-	-	-	OmpA family
CLDAFOJD_00906	0.0	-	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	UvrD-like helicase C-terminal domain
CLDAFOJD_00907	2.27e-86	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
CLDAFOJD_00908	1.31e-114	ywrF	-	-	S	-	-	-	FMN binding
CLDAFOJD_00909	0.0	-	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CLDAFOJD_00910	0.0	-	-	-	T	-	-	-	pathogenesis
CLDAFOJD_00912	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class II (D, K and N)
CLDAFOJD_00913	7.81e-316	-	-	-	-	-	-	-	-
CLDAFOJD_00914	5.12e-71	-	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin-like domain
CLDAFOJD_00916	1.1e-160	-	-	-	S	-	-	-	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CLDAFOJD_00917	4.58e-256	-	-	-	M	ko:K02022	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLDAFOJD_00918	1.7e-301	-	4.2.1.129, 5.4.99.17, 5.5.1.16	-	I	ko:K06045,ko:K17811	ko00909,ko01110,map00909,map01110	ko00000,ko00001,ko01000	PFAM Prenyltransferase squalene oxidase
CLDAFOJD_00919	0.0	-	-	-	I	-	-	-	PFAM Prenyltransferase squalene oxidase
CLDAFOJD_00920	2.98e-295	-	3.2.1.23	-	M	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
CLDAFOJD_00921	5.69e-287	-	3.2.1.23	-	M	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
CLDAFOJD_00924	1.82e-214	-	-	-	K	-	-	-	LysR substrate binding domain
CLDAFOJD_00925	5.45e-234	-	-	-	S	-	-	-	Conserved hypothetical protein 698
CLDAFOJD_00926	2.44e-238	-	-	-	E	-	-	-	Aminotransferase class-V
CLDAFOJD_00927	2.2e-313	-	-	-	S	-	-	-	Protein of unknown function (DUF1015)
CLDAFOJD_00928	0.0	-	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CLDAFOJD_00929	6.62e-182	-	2.7.13.3	-	Q	ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Transposase
CLDAFOJD_00930	4.88e-169	-	4.3.99.3	-	O	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
CLDAFOJD_00931	0.0	-	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CLDAFOJD_00932	5.84e-173	-	-	-	K	-	-	-	Transcriptional regulator
CLDAFOJD_00933	0.0	-	-	-	P	-	-	-	Dimerisation domain of Zinc Transporter
CLDAFOJD_00934	0.0	-	-	-	P	ko:K03455	-	ko00000	TrkA-N domain
CLDAFOJD_00936	7.86e-242	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CLDAFOJD_00937	1.79e-201	-	-	-	S	-	-	-	SigmaW regulon antibacterial
CLDAFOJD_00939	2.02e-173	-	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Thiazole biosynthesis protein ThiG
CLDAFOJD_00940	6.6e-294	-	-	-	E	-	-	-	Amino acid permease
CLDAFOJD_00941	5.68e-156	gph	3.1.3.18, 3.6.1.1	-	S	ko:K01091,ko:K06019	ko00190,ko00630,ko01100,ko01110,ko01130,map00190,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	glycolate biosynthetic process
CLDAFOJD_00942	6.62e-257	-	-	-	S	ko:K11744	-	ko00000	AI-2E family transporter
CLDAFOJD_00943	1.38e-313	-	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CLDAFOJD_00944	1.32e-235	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
CLDAFOJD_00945	0.0	-	-	-	T	ko:K06207	-	ko00000	Elongation factor G C-terminus
CLDAFOJD_00946	8.55e-214	-	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CLDAFOJD_00947	5.11e-222	-	-	-	G	-	-	-	Glycosyl hydrolases family 16
CLDAFOJD_00948	1.14e-129	-	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CLDAFOJD_00949	3.34e-139	-	-	-	T	-	-	-	histone H2A K63-linked ubiquitination
CLDAFOJD_00951	3.23e-253	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CLDAFOJD_00952	2.84e-286	-	-	-	S	-	-	-	Phosphotransferase enzyme family
CLDAFOJD_00953	7.7e-255	-	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
CLDAFOJD_00954	3.73e-269	-	-	GT4	M	ko:K16703	-	ko00000,ko01000,ko01003	transferase activity, transferring glycosyl groups
CLDAFOJD_00956	1.22e-27	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
CLDAFOJD_00957	2.89e-14	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
CLDAFOJD_00959	1.11e-113	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
CLDAFOJD_00960	0.0	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
CLDAFOJD_00961	1.43e-120	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Low molecular weight phosphatase family
CLDAFOJD_00962	0.0	-	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	IMP dehydrogenase / GMP reductase domain
CLDAFOJD_00963	0.0	-	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	GMP synthase C terminal domain
CLDAFOJD_00964	1.58e-138	-	-	-	S	-	-	-	Maltose acetyltransferase
CLDAFOJD_00965	7.51e-152	ppaX_1	3.1.3.18, 3.6.1.1	-	S	ko:K01091,ko:K06019	ko00190,ko00630,ko01100,ko01110,ko01130,map00190,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	glycolate biosynthetic process
CLDAFOJD_00966	2.61e-31	-	-	-	S	-	-	-	NYN domain
CLDAFOJD_00967	5.05e-233	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
CLDAFOJD_00968	2.61e-128	-	-	-	-	-	-	-	-
CLDAFOJD_00969	1.19e-256	-	2.5.1.54	-	E	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLDAFOJD_00970	1.15e-151	-	-	-	NU	-	-	-	Prokaryotic N-terminal methylation motif
CLDAFOJD_00971	1.15e-86	-	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase SecG subunit
CLDAFOJD_00972	9e-65	panD	4.1.1.11	-	H	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CLDAFOJD_00973	1.17e-218	-	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin kinase
CLDAFOJD_00974	9.36e-171	truB	5.4.99.25	-	J	ko:K03177	-	ko00000,ko01000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CLDAFOJD_00975	4.03e-239	-	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain
CLDAFOJD_00977	4.39e-209	lpxG	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase
CLDAFOJD_00978	4.53e-244	-	-	-	H	-	-	-	PFAM glycosyl transferase family 8
CLDAFOJD_00979	7.08e-251	-	-	-	S	-	-	-	Glycosyltransferase like family 2
CLDAFOJD_00980	4.5e-234	-	-	GT9	M	ko:K02843,ko:K02849	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	ADP-heptose-lipopolysaccharide heptosyltransferase activity
CLDAFOJD_00981	1.31e-244	-	5.1.3.20	-	M	ko:K03274	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	3-beta hydroxysteroid dehydrogenase/isomerase family
CLDAFOJD_00982	2.25e-287	-	-	-	M	-	-	-	Glycosyltransferase like family 2
CLDAFOJD_00983	4.21e-204	-	-	-	-	-	-	-	-
CLDAFOJD_00984	1.61e-306	-	-	-	M	-	-	-	Glycosyl transferases group 1
CLDAFOJD_00985	1.22e-251	-	-	-	S	-	-	-	Glycosyltransferase family 10 (fucosyltransferase) C-term
CLDAFOJD_00986	0.0	-	-	-	I	-	-	-	Acyltransferase family
CLDAFOJD_00987	1.01e-255	-	-	-	S	-	-	-	Glycosyltransferase family 10 (fucosyltransferase) C-term
CLDAFOJD_00989	0.0	-	-	-	P	-	-	-	Citrate transporter
CLDAFOJD_00991	6.56e-112	-	-	-	S	ko:K08999	-	ko00000	Bifunctional nuclease
CLDAFOJD_00992	5.58e-110	-	-	-	S	-	-	-	Bacterial transferase hexapeptide (six repeats)
CLDAFOJD_00993	0.0	-	-	-	E	-	-	-	Transglutaminase-like
CLDAFOJD_00994	1.25e-157	-	-	-	C	-	-	-	Nitroreductase family
CLDAFOJD_00995	0.0	-	3.2.1.23	-	G	ko:K01190,ko:K12308	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolases family 35
CLDAFOJD_00996	2.62e-180	-	-	-	CH	-	-	-	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CLDAFOJD_00997	2.07e-243	-	-	-	CH	-	-	-	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CLDAFOJD_00998	1.41e-289	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
CLDAFOJD_00999	2.84e-315	hsrA	-	-	EGP	-	-	-	Major facilitator Superfamily
CLDAFOJD_01000	7.17e-104	yciA	-	-	I	ko:K10806	ko01040,map01040	ko00000,ko00001,ko01000,ko01004	acyl-coa hydrolase
CLDAFOJD_01004	7.66e-245	-	-	-	M	-	-	-	Alginate lyase
CLDAFOJD_01005	2.63e-115	-	-	-	L	-	-	-	Staphylococcal nuclease homologues
CLDAFOJD_01008	2e-120	-	-	-	K	-	-	-	ParB domain protein nuclease
CLDAFOJD_01009	0.0	-	-	-	S	-	-	-	Phosphoadenosine phosphosulfate reductase
CLDAFOJD_01012	2.64e-267	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
CLDAFOJD_01013	1.03e-266	-	-	-	E	-	-	-	FAD dependent oxidoreductase
CLDAFOJD_01014	2.44e-210	-	-	-	S	-	-	-	Rhomboid family
CLDAFOJD_01015	0.0	-	-	-	O	ko:K07391	-	ko00000	Magnesium chelatase, subunit ChlI C-terminal
CLDAFOJD_01016	8.03e-05	-	-	-	-	-	-	-	-
CLDAFOJD_01017	0.0	metY	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Cys/Met metabolism PLP-dependent enzyme
CLDAFOJD_01018	1.32e-313	pqqE	-	-	C	ko:K06139	-	ko00000	SMART Elongator protein 3 MiaB NifB
CLDAFOJD_01019	6.95e-264	pqqE	-	-	C	ko:K06139	-	ko00000	SMART Elongator protein 3 MiaB NifB
CLDAFOJD_01021	8.62e-102	-	-	-	-	-	-	-	-
CLDAFOJD_01022	8.08e-236	gpsA	1.1.1.94	-	C	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CLDAFOJD_01023	4.34e-152	-	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Glycerol-3-phosphate acyltransferase
CLDAFOJD_01024	2.5e-188	pppL	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	protein serine/threonine phosphatase activity
CLDAFOJD_01025	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class II (D, K and N)
CLDAFOJD_01026	0.0	-	1.2.7.1	-	C	ko:K03737	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CLDAFOJD_01027	1.32e-101	manC	-	-	S	-	-	-	Cupin domain
CLDAFOJD_01028	3.2e-70	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
CLDAFOJD_01029	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF4091)
CLDAFOJD_01030	2.58e-178	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
CLDAFOJD_01031	0.0	-	-	-	P	-	-	-	Cation transport protein
CLDAFOJD_01032	3.52e-161	-	-	-	P	ko:K03499	-	ko00000,ko02000	TrkA-N domain
CLDAFOJD_01033	0.0	-	3.6.4.13	-	L	ko:K03578	-	ko00000,ko01000	Oligonucleotide/oligosaccharide-binding (OB)-fold
CLDAFOJD_01034	7.97e-108	-	2.2.1.6	-	E	ko:K01653	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	ACT domain
CLDAFOJD_01035	0.0	-	-	-	O	-	-	-	Trypsin
CLDAFOJD_01036	4.27e-273	-	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III, delta subunit
CLDAFOJD_01037	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CLDAFOJD_01038	6.45e-266	-	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	RibD C-terminal domain
CLDAFOJD_01039	4.01e-157	-	-	-	M	-	-	-	Bacterial transferase hexapeptide (six repeats)
CLDAFOJD_01041	1.45e-258	-	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CLDAFOJD_01043	3.01e-252	-	3.3.1.1	-	H	ko:K01251	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	adenosylhomocysteinase activity
CLDAFOJD_01044	0.0	-	-	-	V	-	-	-	MatE
CLDAFOJD_01045	4.33e-180	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
CLDAFOJD_01046	2.63e-84	-	-	-	M	-	-	-	Lysin motif
CLDAFOJD_01047	4.37e-203	-	-	-	L	ko:K03424	-	ko00000,ko01000	TatD related DNase
CLDAFOJD_01048	1.03e-265	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2219)
CLDAFOJD_01049	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Beta galactosidase small chain
CLDAFOJD_01050	2.66e-06	-	-	-	-	-	-	-	-
CLDAFOJD_01052	0.0	-	2.7.13.3	-	T	ko:K07646	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Osmosensitive K+ channel His kinase sensor domain
CLDAFOJD_01053	2.4e-167	-	-	-	T	ko:K07667	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
CLDAFOJD_01055	0.0	-	3.6.3.12	-	P	ko:K01546	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CLDAFOJD_01056	0.0	-	3.6.3.12	-	P	ko:K01547	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CLDAFOJD_01057	6.76e-131	-	3.6.3.12	-	P	ko:K01548	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CLDAFOJD_01058	1.76e-79	-	-	-	S	-	-	-	PFAM Cupin 2 conserved barrel domain protein
CLDAFOJD_01059	1.34e-232	-	-	-	K	-	-	-	DNA-binding transcription factor activity
CLDAFOJD_01061	0.0	-	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	C-terminal, D2-small domain, of ClpB protein
CLDAFOJD_01062	9.61e-290	-	-	-	S	-	-	-	Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units
CLDAFOJD_01063	0.0	-	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	thiolester hydrolase activity
CLDAFOJD_01064	1.15e-281	-	-	-	IQ	-	-	-	Beta-ketoacyl synthase, C-terminal domain
CLDAFOJD_01065	9.45e-261	-	2.3.1.47	-	H	ko:K00652	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class I and II
CLDAFOJD_01069	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CLDAFOJD_01070	2.46e-309	-	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Histidyl-tRNA synthetase
CLDAFOJD_01071	3.54e-176	hypB	-	-	KO	ko:K04652	-	ko00000,ko03110	CobW/HypB/UreG, nucleotide-binding domain
CLDAFOJD_01072	0.0	-	-	-	O	ko:K04656	-	ko00000	HypF finger
CLDAFOJD_01073	3.9e-50	-	-	-	O	ko:K04653	-	ko00000	HupF/HypC family
CLDAFOJD_01074	1.91e-262	-	-	-	O	ko:K04654	-	ko00000	Hydrogenase formation hypA family
CLDAFOJD_01075	3.59e-241	-	-	-	O	ko:K04655	-	ko00000	AIR synthase related protein, N-terminal domain
CLDAFOJD_01076	1.14e-279	-	-	-	S	-	-	-	COG0790 FOG TPR repeat, SEL1 subfamily
CLDAFOJD_01077	0.0	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
CLDAFOJD_01078	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	MreB/Mbl protein
CLDAFOJD_01079	2.2e-61	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CLDAFOJD_01080	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CLDAFOJD_01081	5.31e-99	-	-	-	S	-	-	-	peptidase
CLDAFOJD_01082	0.0	-	-	-	P	ko:K03306	-	ko00000	phosphate transporter
CLDAFOJD_01086	8.04e-298	-	-	-	-	-	-	-	-
CLDAFOJD_01087	0.0	-	-	-	D	-	-	-	Chain length determinant protein
CLDAFOJD_01088	7.55e-142	-	-	-	M	-	-	-	Polysaccharide biosynthesis/export protein
CLDAFOJD_01090	4.46e-148	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CLDAFOJD_01091	1.67e-249	-	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CLDAFOJD_01092	3.33e-285	pgk	2.7.2.3	-	G	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Phosphoglycerate kinase
CLDAFOJD_01093	3.15e-237	-	-	-	-	-	-	-	-
CLDAFOJD_01094	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	myo-inosose-2 dehydratase activity
CLDAFOJD_01095	0.0	-	-	-	S	ko:K07126	-	ko00000	beta-lactamase activity
CLDAFOJD_01096	0.0	-	-	-	L	-	-	-	TRCF
CLDAFOJD_01097	1.55e-294	-	-	-	-	-	-	-	-
CLDAFOJD_01098	0.0	-	-	-	G	-	-	-	Major Facilitator Superfamily
CLDAFOJD_01099	3e-254	-	-	-	S	-	-	-	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
CLDAFOJD_01101	5.56e-214	-	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	PHP domain
CLDAFOJD_01102	1.4e-259	-	2.3.1.8	-	C	ko:K00625	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Phosphate acetyl/butaryl transferase
CLDAFOJD_01103	4.05e-242	tilS	6.3.4.19	-	D	ko:K04075	-	ko00000,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CLDAFOJD_01104	7.42e-75	-	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
CLDAFOJD_01108	1.89e-100	-	-	-	MP	-	-	-	regulation of cell-substrate adhesion
CLDAFOJD_01112	0.0	-	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	UDP binding domain
CLDAFOJD_01113	1.83e-231	-	1.1.1.37	-	C	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible oxidation of malate to oxaloacetate
CLDAFOJD_01114	0.0	-	-	-	G	-	-	-	Glycogen debranching enzyme
CLDAFOJD_01115	0.0	-	-	-	M	-	-	-	NPCBM/NEW2 domain
CLDAFOJD_01116	0.0	-	-	-	M	ko:K04744	-	ko00000,ko02000	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CLDAFOJD_01117	2.94e-155	-	1.5.1.34	-	C	ko:K10679	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	Nitroreductase family
CLDAFOJD_01118	1.07e-192	-	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	RNA pseudouridylate synthase
CLDAFOJD_01119	1.06e-169	-	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	RNA pseudouridylate synthase
CLDAFOJD_01120	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
CLDAFOJD_01121	4.37e-124	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	adenylate kinase activity
CLDAFOJD_01122	1.25e-166	-	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
CLDAFOJD_01123	0.0	-	-	-	ET	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
CLDAFOJD_01124	4.55e-170	-	-	-	S	-	-	-	Terminase
CLDAFOJD_01129	2.26e-10	-	-	-	L	ko:K02315	-	ko00000,ko03032	PFAM IstB domain protein ATP-binding protein
CLDAFOJD_01130	3.96e-20	-	-	-	K	-	-	-	ROK family
CLDAFOJD_01131	4.43e-14	-	2.1.1.72	-	L	ko:K06223	ko03430,map03430	ko00000,ko00001,ko01000,ko02048,ko03032,ko03400	D12 class N6 adenine-specific DNA methyltransferase
CLDAFOJD_01134	8.3e-50	-	-	-	-	-	-	-	-
CLDAFOJD_01145	3.89e-74	-	-	-	KT	-	-	-	Peptidase S24-like
CLDAFOJD_01147	8.3e-12	-	-	-	-	-	-	-	-
CLDAFOJD_01149	8.26e-07	-	-	-	L	-	-	-	Excalibur calcium-binding domain
CLDAFOJD_01151	5.68e-30	-	-	-	D	-	-	-	Phage minor structural protein
CLDAFOJD_01158	1.35e-18	-	-	-	S	-	-	-	Bacteriophage head to tail connecting protein
CLDAFOJD_01160	9.32e-131	-	-	-	S	-	-	-	Glycosyl hydrolase 108
CLDAFOJD_01167	3.15e-05	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLDAFOJD_01169	2.9e-253	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Semialdehyde dehydrogenase, NAD binding domain
CLDAFOJD_01170	6.21e-304	argJ	2.3.1.1, 2.3.1.35	-	E	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CLDAFOJD_01171	1.44e-110	-	-	-	S	-	-	-	Putative zinc- or iron-chelating domain
CLDAFOJD_01172	5.42e-30	-	-	-	S	ko:K07126	-	ko00000	Sel1-like repeats.
CLDAFOJD_01174	0.0	-	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	ATPases associated with a variety of cellular activities
CLDAFOJD_01175	4e-147	-	-	-	M	-	-	-	Polymer-forming cytoskeletal
CLDAFOJD_01176	1.14e-126	-	-	-	M	-	-	-	Polymer-forming cytoskeletal
CLDAFOJD_01177	1.73e-249	-	-	-	-	-	-	-	-
CLDAFOJD_01179	4.5e-176	-	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidine biosynthesis protein
CLDAFOJD_01180	3.65e-60	-	-	-	S	ko:K09131	-	ko00000	DUF167
CLDAFOJD_01181	1.72e-116	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CLDAFOJD_01182	1.2e-262	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CLDAFOJD_01183	1.1e-174	-	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
CLDAFOJD_01184	2.96e-242	-	3.1.3.18	-	F	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD-hyrolase-like
CLDAFOJD_01185	0.0	-	-	-	M	-	-	-	Parallel beta-helix repeats
CLDAFOJD_01186	1.18e-227	-	2.5.1.32, 2.5.1.99	-	I	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Squalene/phytoene synthase
CLDAFOJD_01187	0.0	-	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Peptidase S24-like
CLDAFOJD_01188	0.0	-	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CLDAFOJD_01189	6.29e-151	-	-	-	-	-	-	-	-
CLDAFOJD_01190	5.71e-165	pks6	-	-	Q	-	-	-	amino acid activation for nonribosomal peptide biosynthetic process
CLDAFOJD_01191	1.76e-173	-	-	-	S	-	-	-	Protein of unknown function (DUF3485)
CLDAFOJD_01192	1.97e-228	-	-	-	C	-	-	-	Transmembrane exosortase (Exosortase_EpsH)
CLDAFOJD_01193	1.31e-219	prs	2.7.6.1	-	EF	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLDAFOJD_01194	3.56e-131	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CLDAFOJD_01196	1.48e-141	hisB	4.2.1.19	-	E	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Imidazoleglycerol-phosphate dehydratase
CLDAFOJD_01197	3.6e-145	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CLDAFOJD_01198	1.56e-60	-	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Ribosomal protein S6
CLDAFOJD_01199	8.87e-212	-	1.1.1.262	-	H	ko:K00097	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Pyridoxal phosphate biosynthetic protein PdxA
CLDAFOJD_01202	9.66e-224	-	-	-	M	-	-	-	D-alanyl-D-alanine carboxypeptidase
CLDAFOJD_01203	1.1e-254	-	2.7.1.11, 2.7.1.90	-	G	ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Phosphofructokinase
CLDAFOJD_01204	1.38e-219	-	-	-	L	-	-	-	Membrane
CLDAFOJD_01205	6.18e-173	zupT	-	-	P	ko:K07238	-	ko00000,ko02000	transporter
CLDAFOJD_01206	8.72e-235	-	-	-	CO	-	-	-	Protein of unknown function, DUF255
CLDAFOJD_01209	0.0	-	2.6.1.66	-	E	ko:K00835	ko00290,ko01100,ko01110,ko01130,map00290,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko01007	Aminotransferase class I and II
CLDAFOJD_01210	2.58e-196	-	-	-	S	-	-	-	Domain of unknown function (DUF1732)
CLDAFOJD_01211	4.39e-145	-	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
CLDAFOJD_01212	0.0	-	-	-	P	-	-	-	Citrate transporter
CLDAFOJD_01213	7.58e-209	-	-	-	J	ko:K01894	-	ko00000,ko01000,ko01007,ko03016	tRNA synthetases class I (E and Q), catalytic domain
CLDAFOJD_01216	1.79e-216	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
CLDAFOJD_01217	5.46e-170	-	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Type I 3-dehydroquinase
CLDAFOJD_01219	1.88e-250	-	-	-	-	-	-	-	-
CLDAFOJD_01220	3.17e-166	-	-	-	S	ko:K05810	-	ko00000,ko01000	Multi-copper polyphenol oxidoreductase laccase
CLDAFOJD_01221	1.1e-173	-	-	-	T	-	-	-	Outer membrane lipoprotein-sorting protein
CLDAFOJD_01222	9.72e-227	-	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
CLDAFOJD_01223	0.0	secD	-	-	U	ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CLDAFOJD_01225	2.47e-273	-	3.4.23.43	-	NOU	ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	Type IV leader peptidase family
CLDAFOJD_01226	1.38e-257	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Possible lysine decarboxylase
CLDAFOJD_01227	2.95e-262	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLDAFOJD_01228	4.19e-87	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
CLDAFOJD_01229	1.54e-217	-	2.3.1.39	-	I	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Acyl transferase domain
CLDAFOJD_01231	1.34e-168	-	-	-	S	-	-	-	HAD-hyrolase-like
CLDAFOJD_01232	3.06e-286	-	-	-	S	ko:K11720	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Predicted permease YjgP/YjgQ family
CLDAFOJD_01233	3.63e-270	-	-	-	E	-	-	-	serine-type peptidase activity
CLDAFOJD_01234	2.03e-308	-	-	-	M	-	-	-	OmpA family
CLDAFOJD_01235	3.11e-216	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CLDAFOJD_01236	0.0	-	-	-	M	-	-	-	Peptidase M60-like family
CLDAFOJD_01237	8.03e-295	-	-	-	EGP	-	-	-	Major facilitator Superfamily
CLDAFOJD_01238	0.0	-	-	-	KT	-	-	-	Sigma factor PP2C-like phosphatases
CLDAFOJD_01239	7.43e-164	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70 region 2
CLDAFOJD_01240	9.96e-244	-	-	-	S	-	-	-	Endonuclease/Exonuclease/phosphatase family
CLDAFOJD_01241	4.16e-270	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	site-specific DNA-methyltransferase (adenine-specific) activity
CLDAFOJD_01242	3.24e-94	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
CLDAFOJD_01243	0.0	-	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
CLDAFOJD_01244	1.38e-174	-	-	-	NU	ko:K02457,ko:K08084	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	protein transport across the cell outer membrane
CLDAFOJD_01245	9.06e-189	-	-	-	-	-	-	-	-
CLDAFOJD_01246	2.55e-247	-	-	-	NU	-	-	-	Prokaryotic N-terminal methylation motif
CLDAFOJD_01247	8.42e-184	-	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Biotin/lipoate A/B protein ligase family
CLDAFOJD_01248	4.94e-245	-	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo/keto reductase family
CLDAFOJD_01249	0.0	hppA	3.6.1.1	-	C	ko:K15987	ko00190,map00190	ko00000,ko00001,ko01000	Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane
CLDAFOJD_01253	0.0	-	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Anthranilate synthase component I, N terminal region
CLDAFOJD_01254	0.0	trpD	2.4.2.18, 4.1.3.27	-	E	ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CLDAFOJD_01255	2.77e-176	-	4.1.1.48	-	E	ko:K01609	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Indole-3-glycerol phosphate synthase
CLDAFOJD_01256	3.43e-154	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
CLDAFOJD_01257	7.27e-287	-	4.2.1.20	-	E	ko:K01696	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
CLDAFOJD_01258	6.37e-187	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
CLDAFOJD_01260	0.0	-	-	-	T	-	-	-	pathogenesis
CLDAFOJD_01261	2.25e-91	-	-	-	O	-	-	-	response to oxidative stress
CLDAFOJD_01262	1.87e-292	-	2.3.1.31	-	E	ko:K00641	ko00270,ko01100,ko01130,map00270,map01100,map01130	ko00000,ko00001,ko01000	alpha/beta hydrolase fold
CLDAFOJD_01263	6.47e-29	-	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L36
CLDAFOJD_01264	0.0	-	2.3.1.241	-	M	ko:K02517	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Glycosyltransferase family 9 (heptosyltransferase)
CLDAFOJD_01265	3.17e-190	-	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	4Fe-4S single cluster domain
CLDAFOJD_01266	0.0	-	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
CLDAFOJD_01267	9.83e-190	-	-	-	E	-	-	-	PFAM lipolytic protein G-D-S-L family
CLDAFOJD_01268	3.84e-188	-	-	-	E	-	-	-	PFAM lipolytic protein G-D-S-L family
CLDAFOJD_01269	0.0	-	-	-	EG	-	-	-	BNR repeat-like domain
CLDAFOJD_01270	0.0	legA	3.5.1.2	-	G	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	response to abiotic stimulus
CLDAFOJD_01271	3.96e-197	supH	-	-	Q	-	-	-	phosphatase activity
CLDAFOJD_01273	5.49e-85	nuoA	1.6.5.3	-	C	ko:K00330	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLDAFOJD_01274	7.13e-276	-	-	-	G	-	-	-	Major Facilitator Superfamily
CLDAFOJD_01278	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CLDAFOJD_01279	2.91e-38	-	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L35
CLDAFOJD_01280	5.25e-79	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CLDAFOJD_01281	0.0	-	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	Peptidase family M50
CLDAFOJD_01284	0.0	-	-	-	L	-	-	-	UvrD/REP helicase N-terminal domain
CLDAFOJD_01285	0.0	-	-	-	L	-	-	-	PD-(D/E)XK nuclease superfamily
CLDAFOJD_01286	3.07e-211	MA20_36650	-	-	EG	-	-	-	spore germination
CLDAFOJD_01287	3.57e-190	dpnC	3.1.21.4	-	L	ko:K01155	-	ko00000,ko01000,ko02048	Dam-replacing family
CLDAFOJD_01288	0.0	-	-	-	S	-	-	-	Alpha-2-macroglobulin family
CLDAFOJD_01289	7.9e-289	-	-	-	C	-	-	-	Iron-containing alcohol dehydrogenase
CLDAFOJD_01291	2.89e-123	-	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
CLDAFOJD_01294	1.79e-213	-	-	-	-	-	-	-	-
CLDAFOJD_01295	1.39e-152	-	-	-	O	-	-	-	Glycoprotease family
CLDAFOJD_01296	4.28e-274	-	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Citrate synthase, C-terminal domain
CLDAFOJD_01298	3.86e-112	-	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CLDAFOJD_01299	4.12e-139	-	-	-	L	-	-	-	RNase_H superfamily
CLDAFOJD_01300	6.68e-103	smpB	-	-	O	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CLDAFOJD_01301	1.5e-44	-	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	RNA polymerase activity
CLDAFOJD_01302	3.51e-136	-	5.4.99.20	-	J	ko:K06181	-	ko00000,ko01000,ko03009	RNA pseudouridylate synthase
CLDAFOJD_01303	4.59e-217	-	-	-	-	-	-	-	-
CLDAFOJD_01304	1.3e-104	-	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	NDK
CLDAFOJD_01305	8.2e-209	-	-	-	S	-	-	-	Glycosyltransferase like family 2
CLDAFOJD_01306	3.38e-224	-	-	-	M	-	-	-	Glycosyl transferase family 2
CLDAFOJD_01308	4.02e-282	-	-	-	NU	ko:K02653	-	ko00000,ko02035,ko02044	Type II secretion system (T2SS), protein F
CLDAFOJD_01309	0.0	-	-	-	NU	ko:K02652	-	ko00000,ko02035,ko02044	Type II secretion system (T2SS), protein E, N-terminal domain
CLDAFOJD_01310	0.0	-	-	-	NU	ko:K02652	-	ko00000,ko02035,ko02044	Type II/IV secretion system protein
CLDAFOJD_01311	5.14e-245	-	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLDAFOJD_01312	2.83e-110	-	-	-	S	-	-	-	Control of competence regulator ComK, YlbF/YmcA
CLDAFOJD_01313	1.1e-280	-	2.6.1.1	-	E	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	DegT/DnrJ/EryC1/StrS aminotransferase family
CLDAFOJD_01314	0.0	murJ	-	-	S	ko:K03980	-	ko00000,ko01011,ko02000	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
CLDAFOJD_01315	1.26e-271	-	-	-	IM	-	-	-	Cytidylyltransferase-like
CLDAFOJD_01316	1.74e-157	-	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Iron/manganese superoxide dismutases, alpha-hairpin domain
CLDAFOJD_01317	0.0	-	-	-	S	-	-	-	Glycosyl hydrolase-like 10
CLDAFOJD_01318	1.47e-171	-	-	-	S	ko:K06898	-	ko00000	AIR carboxylase
CLDAFOJD_01319	1.97e-190	-	-	-	L	ko:K06864	-	ko00000	tRNA processing
CLDAFOJD_01320	3.23e-289	larC	4.99.1.12	-	S	ko:K09121	-	ko00000,ko01000	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
CLDAFOJD_01321	1.07e-238	-	2.5.1.90	-	H	ko:K02523	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Polyprenyl synthetase
CLDAFOJD_01322	0.0	-	-	-	E	ko:K03305	-	ko00000	POT family
CLDAFOJD_01323	0.0	-	5.2.1.8	-	O	ko:K03770	-	ko00000,ko01000,ko03110	PPIC-type PPIASE domain
CLDAFOJD_01324	9.74e-126	-	-	-	S	-	-	-	Pfam:DUF59
CLDAFOJD_01325	2.59e-107	-	-	-	-	-	-	-	-
CLDAFOJD_01327	3.12e-219	-	-	-	E	-	-	-	Domain of unknown function (DUF3472)
CLDAFOJD_01328	0.0	nuoN	1.6.5.3	-	C	ko:K00343	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLDAFOJD_01329	0.0	-	1.6.5.3	-	C	ko:K00342	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Proton-conducting membrane transporter
CLDAFOJD_01330	0.0	-	1.6.5.3	-	CP	ko:K00341	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
CLDAFOJD_01331	6.01e-61	nuoK	1.6.5.3	-	C	ko:K00340	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLDAFOJD_01332	8.89e-156	-	1.6.5.3	-	C	ko:K00339	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
CLDAFOJD_01333	1.8e-124	nuoI	1.6.5.3	-	C	ko:K00338	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLDAFOJD_01334	1.04e-309	nuoH	1.6.5.3	-	C	ko:K00337	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CLDAFOJD_01335	0.0	-	1.6.5.3	-	C	ko:K00336	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CLDAFOJD_01336	0.0	-	1.6.5.3	-	C	ko:K00335	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CLDAFOJD_01337	2.88e-142	-	1.6.5.3	-	C	ko:K00334	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Thioredoxin-like [2Fe-2S] ferredoxin
CLDAFOJD_01338	1.79e-306	nuoD	1.6.5.3	-	C	ko:K00333	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLDAFOJD_01342	6.52e-139	nuoB	1.6.5.3	-	C	ko:K00331	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLDAFOJD_01343	2.1e-140	nuoC	1.6.5.3	-	C	ko:K00332	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLDAFOJD_01344	1.55e-164	-	-	-	-	-	-	-	-
CLDAFOJD_01345	1.27e-70	-	-	-	K	-	-	-	ribonuclease III activity
CLDAFOJD_01346	5.88e-279	-	6.2.1.26	-	IQ	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	AMP-binding enzyme
CLDAFOJD_01348	0.0	-	-	-	S	ko:K07126,ko:K13582	ko04112,map04112	ko00000,ko00001	beta-lactamase activity
CLDAFOJD_01349	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 18
CLDAFOJD_01350	2.51e-06	-	-	-	-	-	-	-	-
CLDAFOJD_01351	0.0	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
CLDAFOJD_01352	0.0	-	3.4.24.70	-	E	ko:K01414	-	ko00000,ko01000,ko01002	Peptidase family M3
CLDAFOJD_01355	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl tRNA synthetase N terminal dom
CLDAFOJD_01357	1.87e-215	-	-	-	K	-	-	-	Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
CLDAFOJD_01358	1.73e-123	paiA	-	-	K	-	-	-	acetyltransferase
CLDAFOJD_01359	2.86e-226	-	-	-	CO	-	-	-	Redoxin
CLDAFOJD_01360	5.74e-86	-	-	-	K	ko:K07343	-	ko00000	positive regulation of type IV pilus biogenesis
CLDAFOJD_01361	1.23e-175	-	6.3.5.11, 6.3.5.9	-	V	ko:K02224,ko:K18554	ko00860,ko01100,ko01120,map00860,map01100,map01120	br01600,ko00000,ko00001,ko01000,ko01504	Chloramphenicol phosphotransferase-like protein
CLDAFOJD_01363	0.0	-	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CLDAFOJD_01364	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CLDAFOJD_01365	3.58e-251	-	2.3.1.1	-	E	ko:K14682	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Acetyltransferase (GNAT) family
CLDAFOJD_01367	2.38e-133	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	nUDIX hydrolase
CLDAFOJD_01368	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CLDAFOJD_01369	1.09e-223	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
CLDAFOJD_01370	2.49e-183	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CLDAFOJD_01371	0.0	-	-	-	N	-	-	-	ABC-type uncharacterized transport system
CLDAFOJD_01372	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4340)
CLDAFOJD_01373	1.57e-190	-	-	-	S	-	-	-	NIF3 (NGG1p interacting factor 3)
CLDAFOJD_01374	3.72e-237	-	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CLDAFOJD_01375	3.98e-277	-	4.2.1.51, 5.4.99.5	-	E	ko:K14170	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Chorismate mutase type II
CLDAFOJD_01376	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
CLDAFOJD_01377	0.0	-	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CLDAFOJD_01378	3.6e-145	-	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	CDP-alcohol phosphatidyltransferase
CLDAFOJD_01380	1.88e-274	-	3.6.4.13	-	L	ko:K11927	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	helicase superfamily c-terminal domain
CLDAFOJD_01382	0.0	-	-	-	S	-	-	-	inositol 2-dehydrogenase activity
CLDAFOJD_01383	1.16e-287	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
CLDAFOJD_01384	6.79e-222	-	3.4.11.10, 3.4.11.6	-	DZ	ko:K19701	-	ko00000,ko01000,ko01002	aminopeptidase activity
CLDAFOJD_01385	2.23e-272	ycaD	-	-	EGP	ko:K08219	-	ko00000,ko02000	Major facilitator Superfamily
CLDAFOJD_01386	1.48e-308	-	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	Sigma-54 factor, Activator interacting domain (AID)
CLDAFOJD_01388	2.32e-176	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CLDAFOJD_01389	4.87e-189	-	-	-	S	-	-	-	Phenazine biosynthesis-like protein
CLDAFOJD_01391	8.84e-140	mntP	-	-	P	-	-	-	manganese ion transmembrane transporter activity
CLDAFOJD_01392	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_01393	5.87e-296	-	-	-	-	-	-	-	-
CLDAFOJD_01394	0.0	-	-	-	L	ko:K07478	-	ko00000	MgsA AAA+ ATPase C terminal
CLDAFOJD_01396	3.51e-223	-	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	NmrA-like family
CLDAFOJD_01397	2.88e-273	-	-	-	S	-	-	-	Phosphotransferase enzyme family
CLDAFOJD_01398	3.93e-216	-	-	-	JM	-	-	-	Nucleotidyl transferase
CLDAFOJD_01400	2.04e-158	-	-	-	S	-	-	-	Peptidase family M50
CLDAFOJD_01401	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Prolyl-tRNA synthetase, C-terminal
CLDAFOJD_01404	2.73e-88	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
CLDAFOJD_01405	0.0	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
CLDAFOJD_01406	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
CLDAFOJD_01407	1.73e-221	-	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Glutaminase
CLDAFOJD_01408	2.43e-95	-	-	-	K	-	-	-	-acetyltransferase
CLDAFOJD_01409	5.82e-308	-	-	-	E	ko:K03310	-	ko00000	Sodium:alanine symporter family
CLDAFOJD_01411	3.95e-252	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CLDAFOJD_01412	1.16e-213	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CLDAFOJD_01413	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CLDAFOJD_01414	1.25e-199	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CLDAFOJD_01418	4.33e-161	menG	2.1.1.163, 2.1.1.201	-	Q	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	ubiE/COQ5 methyltransferase family
CLDAFOJD_01419	0.0	-	-	-	V	-	-	-	MatE
CLDAFOJD_01421	5.24e-137	leuA	2.3.3.13	-	H	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CLDAFOJD_01422	0.0	-	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	DHHA1 domain
CLDAFOJD_01423	0.0	hyl	2.3.1.48, 3.2.1.169, 3.2.1.35	GH84	G	ko:K01197,ko:K15719	ko00531,ko01100,ko04931,map00531,map01100,map04931	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylhexosaminidase activity
CLDAFOJD_01424	5.64e-227	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Zinc-uptake complex component A periplasmic
CLDAFOJD_01425	2.47e-101	-	-	-	-	-	-	-	-
CLDAFOJD_01426	1.77e-191	-	-	-	P	ko:K09820	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
CLDAFOJD_01427	3.84e-180	-	-	-	P	ko:K09819	-	ko00000,ko00002,ko02000	FecCD transport family
CLDAFOJD_01428	5.46e-126	-	-	-	S	ko:K19411	-	ko00000	UvrB/uvrC motif
CLDAFOJD_01429	8.21e-246	-	2.7.14.1	-	E	ko:K19405	-	ko00000,ko01000	ATP:guanido phosphotransferase, C-terminal catalytic domain
CLDAFOJD_01430	0.0	-	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	C-terminal, D2-small domain, of ClpB protein
CLDAFOJD_01431	0.0	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-L-fucosidase
CLDAFOJD_01432	1.45e-74	-	-	-	P	ko:K03972	-	ko00000	Rhodanese Homology Domain
CLDAFOJD_01433	6.54e-205	-	-	-	Q	-	-	-	Fumarylacetoacetate (FAA) hydrolase family
CLDAFOJD_01434	0.0	-	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	HMGL-like
CLDAFOJD_01435	2.57e-223	-	-	-	CO	-	-	-	amine dehydrogenase activity
CLDAFOJD_01436	8.39e-89	-	-	-	S	ko:K09117	-	ko00000	Yqey-like protein
CLDAFOJD_01437	3.69e-166	-	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CLDAFOJD_01438	2.95e-203	-	-	-	GM	-	-	-	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CLDAFOJD_01439	1.9e-107	-	-	-	M	-	-	-	Dolichyl-phosphate-mannose-protein mannosyltransferase
CLDAFOJD_01440	6.9e-232	-	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class I (W and Y)
CLDAFOJD_01441	1.56e-103	-	-	-	T	-	-	-	Universal stress protein family
CLDAFOJD_01442	3.41e-189	-	-	-	S	ko:K09769	-	ko00000	YmdB-like protein
CLDAFOJD_01443	7.14e-185	-	-	-	H	ko:K22132	-	ko00000,ko03016	ThiF family
CLDAFOJD_01444	3.45e-121	-	-	-	-	-	-	-	-
CLDAFOJD_01446	1.23e-47	-	-	-	S	-	-	-	Protease prsW family
CLDAFOJD_01447	2.01e-05	-	-	-	-	-	-	-	-
CLDAFOJD_01452	4.27e-14	-	2.7.11.1	-	T	ko:K08269	ko04136,ko04138,ko04139,ko04140,ko04150,ko04212,map04136,map04138,map04139,map04140,map04150,map04212	ko00000,ko00001,ko01000,ko01001,ko03029,ko04131	Serine threonine-protein kinase
CLDAFOJD_01453	1.03e-293	-	-	-	S	-	-	-	Protein of unknown function (DUF1524)
CLDAFOJD_01454	3.74e-228	-	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
CLDAFOJD_01455	8.88e-122	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
CLDAFOJD_01456	3.77e-289	kbl	2.3.1.29	-	E	ko:K00639	ko00260,map00260	ko00000,ko00001,ko01000,ko01007	Aminotransferase class I and II
CLDAFOJD_01457	0.0	-	-	-	KLT	-	-	-	Sulfatase-modifying factor enzyme 1
CLDAFOJD_01458	1.06e-182	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	AAA domain
CLDAFOJD_01459	0.0	-	-	-	S	ko:K07126	-	ko00000	beta-lactamase activity
CLDAFOJD_01465	4.07e-52	thiS	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	thiamine diphosphate biosynthetic process
CLDAFOJD_01466	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CLDAFOJD_01467	0.0	-	-	-	M	ko:K02847,ko:K13009,ko:K16705	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005,ko02000	-O-antigen
CLDAFOJD_01468	8.67e-85	-	-	-	S	-	-	-	Protein of unknown function, DUF488
CLDAFOJD_01469	2.07e-235	-	2.5.1.61	-	H	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Porphobilinogen deaminase, dipyromethane cofactor binding domain
CLDAFOJD_01470	2.33e-239	hemA	1.2.1.70	-	H	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Glutamyl-tRNAGlu reductase, N-terminal domain
CLDAFOJD_01471	1.19e-177	-	-	-	S	-	-	-	Cytochrome C assembly protein
CLDAFOJD_01472	3.84e-189	folE2	3.5.4.16	-	S	ko:K09007	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Type I GTP cyclohydrolase folE2
CLDAFOJD_01473	4.52e-49	-	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S18
CLDAFOJD_01474	5.67e-33	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L33
CLDAFOJD_01475	1.46e-118	-	-	-	T	-	-	-	Prokaryotic dksA/traR C4-type zinc finger
CLDAFOJD_01476	1.69e-231	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
CLDAFOJD_01477	1.16e-244	sun	2.1.1.176, 2.1.1.178	-	J	ko:K03500,ko:K11392	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CLDAFOJD_01478	1.03e-121	-	-	-	S	ko:K07095	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
CLDAFOJD_01479	2.34e-97	nudI	3.6.1.55	-	F	ko:K03574,ko:K12944	-	ko00000,ko01000,ko03400	GDP-mannose mannosyl hydrolase activity
CLDAFOJD_01481	2.88e-283	-	-	-	M	ko:K02005	-	ko00000	HlyD family secretion protein
CLDAFOJD_01482	2.12e-162	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLDAFOJD_01483	3.42e-313	-	-	-	V	-	-	-	MacB-like periplasmic core domain
CLDAFOJD_01484	3.64e-316	-	-	-	MU	-	-	-	Outer membrane efflux protein
CLDAFOJD_01485	6.41e-284	-	-	-	V	-	-	-	Beta-lactamase
CLDAFOJD_01486	0.0	-	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLDAFOJD_01487	1.16e-280	mtrC	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLDAFOJD_01488	2.91e-94	-	-	-	K	-	-	-	DNA-binding transcription factor activity
CLDAFOJD_01489	1.45e-164	-	-	-	S	-	-	-	Uncharacterised protein family UPF0066
CLDAFOJD_01490	5.56e-306	-	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Dihydro-orotase-like
CLDAFOJD_01491	3.12e-222	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CLDAFOJD_01492	1.15e-122	-	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Phosphoribosyl transferase domain
CLDAFOJD_01493	3.73e-90	-	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	AIR carboxylase
CLDAFOJD_01495	0.0	-	-	-	H	ko:K07137	-	ko00000	5-formyltetrahydrofolate cyclo-ligase activity
CLDAFOJD_01496	2.63e-267	-	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Porphyromonas-type peptidyl-arginine deiminase
CLDAFOJD_01497	2.11e-89	-	-	-	-	-	-	-	-
CLDAFOJD_01498	0.0	rseP	3.4.21.116	-	M	ko:K06399,ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	metalloendopeptidase activity
CLDAFOJD_01499	1.7e-297	-	-	-	S	-	-	-	AI-2E family transporter
CLDAFOJD_01500	0.0	-	-	-	P	-	-	-	Domain of unknown function
CLDAFOJD_01502	1.52e-81	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
CLDAFOJD_01503	4.75e-314	-	-	-	G	-	-	-	cellulose 1,4-beta-cellobiosidase activity
CLDAFOJD_01504	2.72e-186	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CLDAFOJD_01506	1.83e-74	-	-	-	-	-	-	-	-
CLDAFOJD_01507	0.0	-	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	DNA Topoisomerase IV
CLDAFOJD_01510	7.47e-132	-	-	-	S	-	-	-	Glycosyl hydrolase 108
CLDAFOJD_01514	1.24e-200	-	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	ParB-like nuclease domain
CLDAFOJD_01515	5.91e-234	-	-	-	S	-	-	-	Peptidase family M28
CLDAFOJD_01516	0.0	-	-	-	M	-	-	-	Aerotolerance regulator N-terminal
CLDAFOJD_01517	0.0	-	-	-	S	-	-	-	Large extracellular alpha-helical protein
CLDAFOJD_01520	9.48e-237	-	-	-	S	ko:K14347	-	ko00000,ko02000,ko04147	SBF-like CPA transporter family (DUF4137)
CLDAFOJD_01521	1.59e-273	-	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	tRNA synthetases class I (W and Y)
CLDAFOJD_01523	6.05e-86	-	-	-	S	ko:K09922	-	ko00000	Putative member of DMT superfamily (DUF486)
CLDAFOJD_01524	1.87e-212	-	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
CLDAFOJD_01525	6.51e-217	-	-	-	EP	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLDAFOJD_01526	0.0	-	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
CLDAFOJD_01527	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
CLDAFOJD_01528	1.53e-219	-	-	-	O	-	-	-	Thioredoxin-like domain
CLDAFOJD_01529	1.86e-310	-	1.5.1.7	-	E	ko:K00290	ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Saccharopine dehydrogenase C-terminal domain
CLDAFOJD_01530	7.11e-235	-	-	-	S	ko:K01128	-	ko00000,ko01000	acid phosphatase activity
CLDAFOJD_01534	0.0	-	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Tubulin/FtsZ family, GTPase domain
CLDAFOJD_01535	3.38e-294	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CLDAFOJD_01536	1.72e-147	-	-	-	M	-	-	-	NLP P60 protein
CLDAFOJD_01537	0.0	-	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CLDAFOJD_01538	0.0	-	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	ABC transporter transmembrane region
CLDAFOJD_01539	0.0	-	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	ABC transporter transmembrane region
CLDAFOJD_01540	0.0	-	-	-	H	-	-	-	NAD synthase
CLDAFOJD_01541	4.54e-173	-	-	-	Q	ko:K02066	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Permease MlaE
CLDAFOJD_01542	1.75e-189	-	-	-	Q	ko:K02065	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLDAFOJD_01543	3.28e-232	-	-	-	Q	ko:K02067	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	MlaD protein
CLDAFOJD_01544	2.69e-38	-	-	-	T	-	-	-	ribosome binding
CLDAFOJD_01547	5.1e-265	-	-	-	NU	ko:K02669	-	ko00000,ko02035,ko02044	Type II/IV secretion system protein
CLDAFOJD_01548	3.71e-260	-	-	-	NU	ko:K02669	-	ko00000,ko02035,ko02044	Type II/IV secretion system protein
CLDAFOJD_01549	3.36e-248	ppiD	5.2.1.8	-	O	ko:K03769,ko:K03770,ko:K03771,ko:K07533	-	ko00000,ko01000,ko03110	peptidyl-prolyl cis-trans isomerase activity
CLDAFOJD_01551	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_01552	2.4e-180	kdsB	2.7.7.38	-	M	ko:K00979	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CLDAFOJD_01553	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CLDAFOJD_01554	0.0	-	-	-	E	-	-	-	Sodium:solute symporter family
CLDAFOJD_01555	0.0	-	-	-	S	-	-	-	Carbohydrate esterase, sialic acid-specific acetylesterase
CLDAFOJD_01557	1.04e-109	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CLDAFOJD_01558	8.76e-126	-	-	-	-	-	-	-	-
CLDAFOJD_01559	0.0	-	-	-	U	ko:K03321	-	ko00000,ko02000	Sulfate permease family
CLDAFOJD_01560	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Argininosuccinate lyase C-terminal
CLDAFOJD_01561	2.05e-162	-	-	-	S	-	-	-	SWIM zinc finger
CLDAFOJD_01562	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_01563	2.46e-307	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CLDAFOJD_01564	4.2e-204	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
CLDAFOJD_01565	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
CLDAFOJD_01566	1.9e-257	-	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLDAFOJD_01567	0.0	-	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein
CLDAFOJD_01568	0.0	miaB	2.8.4.3	-	J	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CLDAFOJD_01569	6.96e-305	-	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	tRNA (Uracil-5-)-methyltransferase
CLDAFOJD_01572	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_01573	7.36e-55	himA	-	-	L	ko:K03530,ko:K04764,ko:K05788	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
CLDAFOJD_01574	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Glycosyl hydrolase family 36 N-terminal domain
CLDAFOJD_01575	0.0	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
CLDAFOJD_01576	1.33e-110	-	-	-	T	ko:K03413	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	cheY-homologous receiver domain
CLDAFOJD_01577	0.0	-	-	-	T	-	-	-	Histidine kinase
CLDAFOJD_01578	0.0	-	-	-	P	ko:K14445	-	ko00000,ko02000	Citrate transporter
CLDAFOJD_01579	1.52e-188	-	1.97.1.4	-	O	ko:K04069	-	ko00000,ko01000	Radical SAM superfamily
CLDAFOJD_01580	3.8e-43	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	CTP reductase activity
CLDAFOJD_01581	0.0	-	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Anaerobic ribonucleoside-triphosphate reductase
CLDAFOJD_01582	0.0	-	-	-	M	-	-	-	Glycosyl Hydrolase Family 88
CLDAFOJD_01583	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF1705)
CLDAFOJD_01584	1.96e-121	ngr	-	-	C	-	-	-	Rubrerythrin
CLDAFOJD_01586	8.88e-268	-	-	-	G	-	-	-	M42 glutamyl aminopeptidase
CLDAFOJD_01587	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycoside hydrolase, family 20, catalytic core
CLDAFOJD_01588	4.93e-286	-	-	-	EGP	-	-	-	Major facilitator Superfamily
CLDAFOJD_01589	1.18e-276	-	3.1.3.1	-	P	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Alkaline phosphatase homologues
CLDAFOJD_01590	3.06e-85	-	-	-	M	ko:K03282	-	ko00000,ko02000	Large-conductance mechanosensitive channel, MscL
CLDAFOJD_01591	1.95e-312	-	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-III
CLDAFOJD_01592	1.2e-105	-	-	-	S	-	-	-	ACT domain protein
CLDAFOJD_01593	9.29e-132	-	-	-	J	ko:K02356	-	ko00000,ko03012	Elongation factor P (EF-P) OB domain
CLDAFOJD_01594	2.85e-245	-	-	-	G	-	-	-	Glycosyl hydrolases family 16
CLDAFOJD_01595	0.0	-	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	E1-E2 ATPase
CLDAFOJD_01596	0.0	-	-	-	L	ko:K03631	-	ko00000,ko03400	RecF/RecN/SMC N terminal domain
CLDAFOJD_01597	3.71e-190	-	3.1.4.55	-	S	ko:K06167	ko00440,map00440	ko00000,ko00001,ko01000	Metallo-beta-lactamase superfamily
CLDAFOJD_01598	1.45e-191	-	-	-	M	-	-	-	Glycosyl transferase WecB/TagA/CpsF family
CLDAFOJD_01599	1.76e-170	yyaQ	-	-	V	-	-	-	Protein conserved in bacteria
CLDAFOJD_01600	1.9e-90	-	-	-	-	-	-	-	-
CLDAFOJD_01603	1.35e-205	-	-	-	S	ko:K09949	-	ko00000	Protein of unknown function (DUF1009)
CLDAFOJD_01604	1.63e-298	-	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CLDAFOJD_01605	9.47e-236	-	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, pyrimidine binding domain
CLDAFOJD_01606	6.82e-223	-	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
CLDAFOJD_01607	2.52e-197	-	-	-	K	-	-	-	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CLDAFOJD_01608	3.51e-243	-	-	-	M	ko:K18094	ko01501,ko02020,map01501,map02020	ko00000,ko00001,ko00002,ko01504,ko02000	Biotin-lipoyl like
CLDAFOJD_01609	0.0	-	-	-	V	ko:K18095	ko01501,ko02020,map01501,map02020	ko00000,ko00001,ko00002,ko01504,ko02000	AcrB/AcrD/AcrF family
CLDAFOJD_01610	0.0	-	-	-	S	-	-	-	pathogenesis
CLDAFOJD_01611	3.48e-98	-	-	-	S	-	-	-	peptidase
CLDAFOJD_01612	3e-171	-	-	-	S	ko:K06973	-	ko00000	Putative neutral zinc metallopeptidase
CLDAFOJD_01613	6.42e-101	-	-	-	S	-	-	-	peptidase
CLDAFOJD_01614	0.0	-	2.1.1.107, 4.2.1.75	-	H	ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase HemD
CLDAFOJD_01615	7.84e-101	-	-	-	-	-	-	-	-
CLDAFOJD_01616	0.0	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Bacterial DNA topoisomeraes I ATP-binding domain
CLDAFOJD_01620	8.8e-169	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	PFAM N-acetylmuramoyl-L-alanine amidase family 2
CLDAFOJD_01621	0.0	-	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Aconitase C-terminal domain
CLDAFOJD_01622	2.93e-125	-	-	-	D	-	-	-	ErfK ybiS ycfS ynhG family protein
CLDAFOJD_01624	1.77e-284	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CLDAFOJD_01627	0.0	-	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	transmembrane transport
CLDAFOJD_01628	1.17e-271	-	-	-	S	-	-	-	tRNA-splicing ligase RtcB
CLDAFOJD_01629	2.75e-214	-	-	-	K	-	-	-	LysR substrate binding domain
CLDAFOJD_01630	3.53e-295	-	-	-	EGP	-	-	-	Major facilitator Superfamily
CLDAFOJD_01632	7.1e-130	-	-	-	S	-	-	-	Cobalamin adenosyltransferase
CLDAFOJD_01633	6.52e-75	-	-	-	L	-	-	-	Cupin 2, conserved barrel domain protein
CLDAFOJD_01634	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	subunit M
CLDAFOJD_01635	1.32e-196	-	-	-	V	-	-	-	AAA domain
CLDAFOJD_01636	3.86e-122	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
CLDAFOJD_01637	0.0	hsdR	3.1.21.3	-	F	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
CLDAFOJD_01638	4.61e-19	-	-	-	-	-	-	-	-
CLDAFOJD_01639	1.71e-27	-	-	-	U	-	-	-	Relaxase mobilization nuclease domain protein
CLDAFOJD_01640	4.16e-14	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
CLDAFOJD_01641	1.14e-161	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLDAFOJD_01643	0.0	rnr	-	-	K	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CLDAFOJD_01645	0.0	-	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Collagenase
CLDAFOJD_01646	2.54e-285	-	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Mur ligase middle domain
CLDAFOJD_01648	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CLDAFOJD_01649	0.0	-	2.7.11.1	-	L	ko:K08282	-	ko00000,ko01000	SNF2 Helicase protein
CLDAFOJD_01650	0.0	-	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
CLDAFOJD_01651	1.77e-124	-	-	-	M	ko:K03642	-	ko00000	Lytic transglycolase
CLDAFOJD_01652	4.2e-208	nadK	2.7.1.23	-	G	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CLDAFOJD_01653	1.53e-47	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal proteins 50S L24/mitochondrial 39S L24
CLDAFOJD_01654	5.36e-138	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CLDAFOJD_01655	1.66e-87	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CLDAFOJD_01656	2.25e-105	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CLDAFOJD_01657	2.38e-74	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CLDAFOJD_01658	3.38e-102	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CLDAFOJD_01659	6.42e-101	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
CLDAFOJD_01661	0.0	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CLDAFOJD_01662	6.41e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CLDAFOJD_01663	1.29e-192	map	3.4.11.18	-	J	ko:K01265	-	ko00000,ko01000,ko01002	Metallopeptidase family M24
CLDAFOJD_01664	8.13e-264	-	-	-	S	ko:K11941	-	ko00000,ko01000	transferase activity, transferring acyl groups other than amino-acyl groups
CLDAFOJD_01665	0.0	-	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Ppx/GppA phosphatase family
CLDAFOJD_01666	0.0	-	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Polyphosphate kinase middle domain
CLDAFOJD_01667	1.02e-281	-	-	-	H	-	-	-	PFAM glycosyl transferase family 8
CLDAFOJD_01669	8.96e-274	-	-	GT2	S	ko:K19427	-	ko00000,ko01000	PFAM glycosyl transferase family 2
CLDAFOJD_01670	3.06e-226	-	-	-	S	-	-	-	Glycosyl transferase family 11
CLDAFOJD_01671	4.88e-263	-	-	-	S	-	-	-	Glycosyltransferase like family 2
CLDAFOJD_01672	3.23e-290	-	-	-	-	-	-	-	-
CLDAFOJD_01673	2.16e-265	-	-	-	S	-	-	-	PFAM glycosyl transferase family 2
CLDAFOJD_01674	3.93e-128	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
CLDAFOJD_01675	6.83e-231	-	-	-	C	-	-	-	e3 binding domain
CLDAFOJD_01676	4.34e-284	-	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CLDAFOJD_01677	4.05e-135	-	5.2.1.8	-	O	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CLDAFOJD_01678	0.0	-	-	-	EGIP	-	-	-	Phosphate acyltransferases
CLDAFOJD_01679	0.0	-	-	-	T	-	-	-	5TM C-terminal transporter carbon starvation CstA
CLDAFOJD_01680	2.76e-151	-	-	-	-	-	-	-	-
CLDAFOJD_01681	0.0	-	-	-	P	-	-	-	PA14 domain
CLDAFOJD_01682	2e-82	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CLDAFOJD_01683	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CLDAFOJD_01684	5.58e-289	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	NusA-like KH domain
CLDAFOJD_01685	3.73e-195	-	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease/Exonuclease/phosphatase family
CLDAFOJD_01686	7.02e-144	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CLDAFOJD_01687	1.49e-135	-	-	-	J	-	-	-	Putative rRNA methylase
CLDAFOJD_01688	1.63e-203	-	-	-	S	-	-	-	Domain of unknown function (DUF362)
CLDAFOJD_01689	0.0	-	-	-	C	-	-	-	PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein
CLDAFOJD_01690	0.0	-	-	-	V	-	-	-	ABC-2 type transporter
CLDAFOJD_01692	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_01693	1.44e-184	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
CLDAFOJD_01694	6.02e-142	-	-	-	S	-	-	-	RNA recognition motif
CLDAFOJD_01695	0.0	-	-	-	M	-	-	-	Bacterial sugar transferase
CLDAFOJD_01696	8.88e-284	-	2.7.1.6	-	G	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Galactokinase galactose-binding signature
CLDAFOJD_01697	0.0	-	-	-	S	ko:K03307	-	ko00000	Sodium:solute symporter family
CLDAFOJD_01699	0.0	-	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	UvrD-like helicase C-terminal domain
CLDAFOJD_01700	3.02e-227	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CLDAFOJD_01701	9.27e-271	-	-	-	M	-	-	-	Monogalactosyldiacylglycerol (MGDG) synthase
CLDAFOJD_01702	7.16e-174	coaX	2.7.1.33	-	K	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Type III pantothenate kinase
CLDAFOJD_01703	8.56e-45	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Phosphopantetheine attachment site
CLDAFOJD_01704	3.5e-132	-	-	-	-	-	-	-	-
CLDAFOJD_01705	5.19e-178	-	-	-	S	-	-	-	Lysin motif
CLDAFOJD_01706	5.31e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CLDAFOJD_01707	4.21e-54	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
CLDAFOJD_01709	1.7e-104	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
CLDAFOJD_01710	5.63e-205	-	-	-	M	-	-	-	self proteolysis
CLDAFOJD_01714	2.31e-25	-	-	-	U	-	-	-	Passenger-associated-transport-repeat
CLDAFOJD_01715	0.0	-	2.3.1.40, 6.2.1.20	-	IQ	ko:K05939	ko00071,ko00564,map00071,map00564	ko00000,ko00001,ko01000	AMP-binding enzyme
CLDAFOJD_01716	0.0	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CLDAFOJD_01717	6.39e-71	-	-	-	-	-	-	-	-
CLDAFOJD_01720	5.49e-206	-	-	-	S	ko:K03453	-	ko00000	Bile acid
CLDAFOJD_01721	4.43e-291	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CLDAFOJD_01722	1.08e-269	sucC	6.2.1.5	-	C	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
CLDAFOJD_01723	3.89e-209	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CLDAFOJD_01724	3.73e-176	-	-	-	-	-	-	-	-
CLDAFOJD_01726	0.0	-	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	RQC
CLDAFOJD_01732	1.97e-230	-	-	-	S	-	-	-	mannose-ethanolamine phosphotransferase activity
CLDAFOJD_01734	6.29e-115	-	-	-	S	ko:K03748	-	ko00000	DUF218 domain
CLDAFOJD_01736	3.15e-103	-	-	-	J	-	-	-	YjgF/chorismate_mutase-like, putative endoribonuclease
CLDAFOJD_01737	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_01738	1e-112	-	1.16.3.2	-	P	ko:K02217	-	ko00000,ko01000	Ferritin-like domain
CLDAFOJD_01740	4.98e-92	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
CLDAFOJD_01741	1.25e-307	-	4.2.1.20	-	E	ko:K06001	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
CLDAFOJD_01742	1.51e-235	-	2.7.1.221	-	S	ko:K07102	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Phosphotransferase enzyme family
CLDAFOJD_01743	0.0	-	-	-	T	-	-	-	Chase2 domain
CLDAFOJD_01744	2.34e-107	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Low molecular weight phosphatase family
CLDAFOJD_01745	2.7e-113	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
CLDAFOJD_01746	0.0	-	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome bd terminal oxidase subunit I
CLDAFOJD_01747	1.48e-245	-	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome bd terminal oxidase subunit II
CLDAFOJD_01748	0.0	-	1.2.4.2	-	C	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoglutarate dehydrogenase C-terminal
CLDAFOJD_01749	3.09e-231	-	2.3.1.61	-	C	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CLDAFOJD_01750	1.1e-57	-	3.4.11.5	-	S	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	nucleotidyltransferase activity
CLDAFOJD_01751	5.53e-96	-	-	-	S	-	-	-	Nucleotidyltransferase substrate binding protein like
CLDAFOJD_01752	0.0	-	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CLDAFOJD_01753	1.4e-314	-	3.5.4.28, 3.5.4.31	-	F	ko:K12960	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
CLDAFOJD_01754	6.65e-160	-	-	-	M	ko:K16079	-	ko00000,ko02000	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CLDAFOJD_01755	0.0	-	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Glycosyl hydrolases family 35
CLDAFOJD_01756	0.0	-	-	-	E	ko:K13893	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
CLDAFOJD_01758	0.0	-	-	-	H	ko:K02014	-	ko00000,ko02000	TonB dependent receptor
CLDAFOJD_01759	0.0	cobQ	-	-	H	-	-	-	Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
CLDAFOJD_01760	1.11e-237	cobD	6.3.1.10	-	H	ko:K02227	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CLDAFOJD_01761	2.08e-241	cobT	2.4.2.21	-	H	ko:K00768	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CLDAFOJD_01762	6.86e-174	cobS	2.7.8.26	-	H	ko:K02233	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
CLDAFOJD_01763	2.17e-203	-	-	-	G	-	-	-	myo-inosose-2 dehydratase activity
CLDAFOJD_01764	4.46e-127	cobU	2.7.1.156, 2.7.7.62, 6.3.5.10	-	H	ko:K02231,ko:K02232	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	cobinamide kinase activity
CLDAFOJD_01767	2.18e-269	-	-	-	K	-	-	-	Periplasmic binding protein-like domain
CLDAFOJD_01768	1.49e-215	-	-	-	M	-	-	-	Carbohydrate esterase, sialic acid-specific acetylesterase
CLDAFOJD_01769	9.1e-300	-	2.7.1.11, 2.7.1.90	-	H	ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
CLDAFOJD_01771	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	PFAM Glycoside hydrolase, family 20, catalytic core
CLDAFOJD_01772	0.0	rarA	-	-	L	ko:K07478	-	ko00000	MgsA AAA+ ATPase C terminal
CLDAFOJD_01773	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase activity
CLDAFOJD_01774	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Beta galactosidase small chain
CLDAFOJD_01775	5.29e-161	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
CLDAFOJD_01776	3.89e-267	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLDAFOJD_01777	0.0	-	4.1.1.19	-	E	ko:K01585	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CLDAFOJD_01778	7.45e-301	-	4.1.1.96	-	E	ko:K13747	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
CLDAFOJD_01780	0.0	-	-	-	P	-	-	-	Sulfatase
CLDAFOJD_01781	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Leucyl-tRNA synthetase, Domain 2
CLDAFOJD_01782	2.22e-151	-	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribulose-phosphate 3 epimerase family
CLDAFOJD_01783	2.57e-220	-	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Phosphatidylserine decarboxylase
CLDAFOJD_01784	1.5e-198	-	-	-	S	-	-	-	metallopeptidase activity
CLDAFOJD_01785	0.0	-	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, central domain
CLDAFOJD_01786	2.84e-142	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
CLDAFOJD_01787	7.84e-42	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S20
CLDAFOJD_01789	1.31e-289	-	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	LytB protein
CLDAFOJD_01790	8.69e-261	-	-	-	J	ko:K05541	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLDAFOJD_01791	6.93e-284	-	-	-	E	-	-	-	Transglutaminase-like superfamily
CLDAFOJD_01792	1.3e-202	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
CLDAFOJD_01793	8.33e-182	-	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
CLDAFOJD_01794	7.21e-203	folD	1.5.1.5, 3.5.4.9	-	H	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CLDAFOJD_01795	7.21e-183	-	-	-	S	ko:K09778	-	ko00000	Domain of unknown function (DUF374)
CLDAFOJD_01796	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_01797	0.0	-	-	-	NU	ko:K02453	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	Bacterial type II and III secretion system protein
CLDAFOJD_01798	0.0	-	-	-	G	-	-	-	Alpha amylase, catalytic domain
CLDAFOJD_01799	0.0	-	2.7.7.19	-	J	ko:K00970	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Poly A polymerase head domain
CLDAFOJD_01800	6.84e-311	-	-	-	O	-	-	-	peroxiredoxin activity
CLDAFOJD_01801	0.0	-	-	-	P	ko:K03306	-	ko00000	phosphate transporter
CLDAFOJD_01802	0.0	-	3.6.4.13	-	L	ko:K03579	-	ko00000,ko01000	ATP-dependent helicase C-terminal
CLDAFOJD_01803	2.31e-215	-	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Cytidylyltransferase family
CLDAFOJD_01804	0.0	-	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	tail specific protease
CLDAFOJD_01805	0.0	-	-	-	E	-	-	-	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CLDAFOJD_01808	1.52e-186	-	3.4.13.22	-	M	ko:K08641	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	D-ala-D-ala dipeptidase
CLDAFOJD_01809	0.0	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CLDAFOJD_01810	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CLDAFOJD_01811	0.0	-	-	-	-	ko:K07403	-	ko00000	-
CLDAFOJD_01812	0.0	-	2.8.4.4	-	J	ko:K14441	-	ko00000,ko01000,ko03009	Uncharacterized protein family UPF0004
CLDAFOJD_01814	0.0	-	2.4.1.25	GH77	G	ko:K00705	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	4-alpha-glucanotransferase
CLDAFOJD_01815	0.0	pmp21	-	-	T	-	-	-	pathogenesis
CLDAFOJD_01816	2.42e-203	-	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase (PrmA)
CLDAFOJD_01817	1.25e-140	-	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Lumazine binding domain
CLDAFOJD_01818	0.0	-	-	-	P	-	-	-	Putative Na+/H+ antiporter
CLDAFOJD_01819	0.0	-	-	-	G	-	-	-	Polysaccharide deacetylase
CLDAFOJD_01822	1.25e-204	dapA	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Dihydrodipicolinate synthetase family
CLDAFOJD_01823	4.14e-175	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Dihydrodipicolinate reductase, N-terminus
CLDAFOJD_01824	4.21e-121	-	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
CLDAFOJD_01825	4.13e-183	panB	2.1.2.11	-	H	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
CLDAFOJD_01826	1.96e-226	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
CLDAFOJD_01827	7.29e-211	-	-	-	M	-	-	-	Peptidase family M23
CLDAFOJD_01832	1.44e-109	-	-	-	S	-	-	-	Acetyltransferase (GNAT) family
CLDAFOJD_01833	3.48e-134	-	-	-	C	-	-	-	Nitroreductase family
CLDAFOJD_01835	0.0	-	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
CLDAFOJD_01836	1.66e-87	-	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
CLDAFOJD_01837	1.03e-237	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CLDAFOJD_01838	8.07e-174	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	tRNA (Guanine-1)-methyltransferase
CLDAFOJD_01839	2.05e-28	-	-	-	-	-	-	-	-
CLDAFOJD_01841	2.37e-237	-	-	-	S	-	-	-	PFAM Sel1 domain protein repeat-containing protein
CLDAFOJD_01842	1.21e-55	tatA	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
CLDAFOJD_01843	0.0	-	-	-	J	ko:K07576	-	ko00000	Beta-Casp domain
CLDAFOJD_01844	1.55e-83	-	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	ArsC family
CLDAFOJD_01845	8.34e-180	-	-	-	P	ko:K10716	-	ko00000,ko02000	domain protein
CLDAFOJD_01846	0.0	-	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Carbohydrate phosphorylase
CLDAFOJD_01847	2.04e-258	tdh	1.1.1.103	-	E	ko:K00060	ko00260,map00260	ko00000,ko00001,ko01000	Alcohol dehydrogenase GroES-like domain
CLDAFOJD_01848	5.46e-161	-	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CLDAFOJD_01850	1.23e-179	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
CLDAFOJD_01851	3.92e-115	-	-	-	-	-	-	-	-
CLDAFOJD_01854	0.0	-	-	-	L	-	-	-	DNA restriction-modification system
CLDAFOJD_01857	2.55e-171	-	-	-	S	-	-	-	PFAM Sel1 domain protein repeat-containing protein
CLDAFOJD_01859	1.49e-178	-	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
CLDAFOJD_01861	9.04e-317	-	-	-	P	ko:K14445	-	ko00000,ko02000	Citrate transporter
CLDAFOJD_01862	0.0	-	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLDAFOJD_01863	2.76e-267	mtrC	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLDAFOJD_01864	0.0	-	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
CLDAFOJD_01866	0.0	-	-	-	G	-	-	-	alpha-galactosidase
CLDAFOJD_01867	0.000553	-	-	-	-	-	-	-	-
CLDAFOJD_01868	0.0	poxB	1.2.3.3, 1.2.5.1	-	EH	ko:K00156,ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Thiamine pyrophosphate enzyme, central domain
CLDAFOJD_01869	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLDAFOJD_01870	2.72e-183	-	-	-	L	ko:K10800	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	uracil-dna glycosylase
CLDAFOJD_01871	1.13e-228	-	2.7.1.11	-	G	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Phosphofructokinase
CLDAFOJD_01872	8.83e-270	-	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Male sterility protein
CLDAFOJD_01873	9.53e-206	-	2.7.7.24	-	M	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CLDAFOJD_01875	0.0	-	-	-	C	-	-	-	Acetyl-CoA hydrolase/transferase C-terminal domain
CLDAFOJD_01876	1.35e-191	-	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Biotin/lipoate A/B protein ligase family
CLDAFOJD_01877	0.0	-	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	Na+-transporting oxaloacetate decarboxylase beta subunit
CLDAFOJD_01878	3.41e-55	-	-	-	I	-	-	-	PFAM biotin lipoyl attachment domain-containing protein
CLDAFOJD_01880	0.0	-	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Carboxyl transferase domain
CLDAFOJD_01881	4.12e-100	-	5.1.99.1	-	E	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Glyoxalase-like domain
CLDAFOJD_01882	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
CLDAFOJD_01883	8.14e-75	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CLDAFOJD_01885	0.000231	-	2.7.11.1, 2.7.11.17	-	T	ko:K08794,ko:K13412,ko:K17530	ko04626,ko04921,ko04925,ko05145,map04626,map04921,map04925,map05145	ko00000,ko00001,ko01000,ko01001	protein serine/threonine kinase activity
CLDAFOJD_01886	0.0	-	-	-	S	-	-	-	acetyltransferases and hydrolases with the alpha beta hydrolase fold
CLDAFOJD_01887	1.56e-297	-	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CLDAFOJD_01888	3.13e-114	-	-	-	P	-	-	-	Rhodanese-like domain
CLDAFOJD_01889	1.19e-152	-	-	-	S	-	-	-	Protein of unknown function (DUF1573)
CLDAFOJD_01890	1.76e-186	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	Signal peptidase (SPase) II
CLDAFOJD_01891	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CLDAFOJD_01892	1.17e-247	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CLDAFOJD_01893	1.46e-09	-	-	-	S	-	-	-	Peptidase family M28
CLDAFOJD_01894	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
CLDAFOJD_01895	4.81e-58	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
CLDAFOJD_01896	2.64e-89	-	-	-	S	ko:K09793	-	ko00000	Protein of unknown function (DUF456)
CLDAFOJD_01897	3.39e-210	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
CLDAFOJD_01898	0.0	-	-	-	M	ko:K09808	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	MacB-like periplasmic core domain
CLDAFOJD_01899	5.32e-208	-	-	-	S	-	-	-	RDD family
CLDAFOJD_01900	1.25e-132	-	2.3.1.129	-	M	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	ko00000,ko00001,ko00002,ko01000,ko01005	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CLDAFOJD_01901	6.64e-170	-	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD-hyrolase-like
CLDAFOJD_01902	5.99e-286	-	-	-	S	ko:K09760	-	ko00000	RmuC family
CLDAFOJD_01903	0.0	-	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Transglycosylase
CLDAFOJD_01904	1.35e-240	-	-	-	O	-	-	-	Trypsin-like peptidase domain
CLDAFOJD_01905	5.88e-277	-	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
CLDAFOJD_01907	5.14e-246	-	-	-	-	-	-	-	-
CLDAFOJD_01908	0.0	-	-	-	H	-	-	-	Flavin containing amine oxidoreductase
CLDAFOJD_01909	3.53e-226	-	-	-	-	-	-	-	-
CLDAFOJD_01910	0.0	-	-	-	P	-	-	-	Domain of unknown function (DUF4976)
CLDAFOJD_01911	0.0	-	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	RecQ zinc-binding
CLDAFOJD_01913	3.86e-304	-	-	-	M	-	-	-	Glycosyl transferases group 1
CLDAFOJD_01914	9.76e-258	-	-	-	S	-	-	-	Glycoside-hydrolase family GH114
CLDAFOJD_01915	0.0	-	1.4.3.16	-	H	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Fumarate reductase flavoprotein C-term
CLDAFOJD_01916	2.86e-133	-	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	SpoU rRNA Methylase family
CLDAFOJD_01917	4.56e-206	-	3.1.1.53	-	L	ko:K03547,ko:K05970	-	ko00000,ko01000,ko03400	3'-5' exonuclease activity
CLDAFOJD_01918	4.92e-90	-	-	-	K	-	-	-	Helix-turn-helix diphteria tox regulatory element
CLDAFOJD_01919	0.0	-	-	-	P	-	-	-	E1-E2 ATPase
CLDAFOJD_01922	2.83e-303	-	-	-	M	ko:K07267	-	ko00000,ko02000	wide pore channel activity
CLDAFOJD_01925	0.0	-	-	-	P	ko:K04759	-	ko00000,ko02000	Ferrous iron transport protein B C terminus
CLDAFOJD_01926	4.02e-48	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	iron ion homeostasis
CLDAFOJD_01927	2.48e-40	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	iron ion homeostasis
CLDAFOJD_01928	0.0	-	1.11.1.5	-	P	ko:K00428	-	ko00000,ko01000	Di-haem cytochrome c peroxidase
CLDAFOJD_01929	5.44e-229	lipA	2.8.1.8	-	H	ko:K03644	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CLDAFOJD_01930	1.1e-131	tadA	3.5.4.33	-	FJ	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CLDAFOJD_01931	1.65e-240	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
CLDAFOJD_01932	0.0	-	-	-	P	-	-	-	E1-E2 ATPase
CLDAFOJD_01933	0.0	-	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CLDAFOJD_01934	1.85e-142	coaE	2.7.1.24	-	H	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CLDAFOJD_01935	0.0	-	-	-	NU	ko:K02453	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	Bacterial type II and III secretion system protein
CLDAFOJD_01936	2.27e-245	-	-	-	-	-	-	-	-
CLDAFOJD_01937	1.06e-208	-	-	-	-	-	-	-	-
CLDAFOJD_01938	0.0	-	-	-	NU	-	-	-	Type IV pilus assembly protein PilM;
CLDAFOJD_01939	2.8e-169	-	-	-	-	-	-	-	-
CLDAFOJD_01940	5.43e-255	-	-	-	G	-	-	-	M42 glutamyl aminopeptidase
CLDAFOJD_01941	7.19e-261	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CLDAFOJD_01942	4.87e-156	-	-	-	S	-	-	-	Protein of unknown function (DUF3313)
CLDAFOJD_01943	2.04e-314	-	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	Aminopeptidase P, N-terminal domain
CLDAFOJD_01944	3.88e-207	hisG	2.4.2.17	-	E	ko:K00765	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	ATP phosphoribosyltransferase
CLDAFOJD_01945	2.09e-10	-	-	-	S	-	-	-	Mitochondrial domain of unknown function (DUF1713)
CLDAFOJD_01946	4.97e-290	-	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
CLDAFOJD_01947	2.81e-167	-	-	-	T	ko:K07657	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
CLDAFOJD_01948	0.0	-	4.2.1.9	-	EG	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Dehydratase family
CLDAFOJD_01949	6.81e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF3847)
CLDAFOJD_01951	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
CLDAFOJD_01952	3.35e-77	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	COG0732 Restriction endonuclease S subunits
CLDAFOJD_01953	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
CLDAFOJD_01954	1.39e-206	-	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil DNA glycosylase superfamily
CLDAFOJD_01955	1.4e-287	-	4.1.99.19	-	H	ko:K03150	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Biotin and Thiamin Synthesis associated domain
CLDAFOJD_01956	0.0	-	-	-	M	-	-	-	Sulfatase
CLDAFOJD_01957	1.79e-289	-	-	-	-	-	-	-	-
CLDAFOJD_01958	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
CLDAFOJD_01959	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF2851)
CLDAFOJD_01960	6.39e-119	-	-	-	T	-	-	-	STAS domain
CLDAFOJD_01961	6.45e-260	-	-	-	I	-	-	-	Prenyltransferase and squalene oxidase repeat
CLDAFOJD_01962	1.26e-247	-	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	NmrA-like family
CLDAFOJD_01963	0.0	-	2.1.1.182	-	IJ	ko:K02528	-	ko00000,ko01000,ko03009	Ribosomal RNA adenine dimethylases
CLDAFOJD_01964	8.42e-102	-	-	-	-	-	-	-	-
CLDAFOJD_01965	9.86e-54	-	-	-	-	-	-	-	-
CLDAFOJD_01966	1.11e-121	-	-	-	-	-	-	-	-
CLDAFOJD_01967	6.81e-298	-	-	-	V	ko:K03327	-	ko00000,ko02000	drug transmembrane transporter activity
CLDAFOJD_01968	0.0	-	-	-	P	-	-	-	Cation transport protein
CLDAFOJD_01971	2.66e-148	-	-	-	M	ko:K17733	-	ko00000,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
CLDAFOJD_01977	1.07e-264	-	-	GT4	M	ko:K16703	-	ko00000,ko01000,ko01003	transferase activity, transferring glycosyl groups
CLDAFOJD_01979	0.0	-	-	-	M	-	-	-	pathogenesis
CLDAFOJD_01984	3.6e-89	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
CLDAFOJD_01988	0.0	kdpA	3.6.3.12	-	P	ko:K01546	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CLDAFOJD_01989	0.0	kdpB	3.6.3.12	-	P	ko:K01547	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CLDAFOJD_01990	7.28e-132	kdpC	3.6.3.12	-	P	ko:K01548	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CLDAFOJD_01991	3.88e-263	-	2.7.13.3	-	T	ko:K07646	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Osmosensitive K+ channel His kinase sensor domain
CLDAFOJD_01992	4.33e-234	-	2.7.11.1	-	T	ko:K08884,ko:K12132,ko:K20333	ko02024,map02024	ko00000,ko00001,ko01000,ko01001	PFAM Formylglycine-generating sulfatase enzyme
CLDAFOJD_01994	2.06e-196	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
CLDAFOJD_01995	9.18e-137	-	-	-	K	ko:K03088	-	ko00000,ko03021	DNA-templated transcription, initiation
CLDAFOJD_01996	0.0	-	-	-	KLT	-	-	-	Protein tyrosine kinase
CLDAFOJD_01997	6.35e-277	-	-	-	C	-	-	-	Aldo/keto reductase family
CLDAFOJD_01998	6.71e-90	-	-	-	K	-	-	-	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CLDAFOJD_01999	6.99e-260	-	4.1.2.48	-	E	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Beta-eliminating lyase
CLDAFOJD_02000	1.99e-290	-	-	-	-	-	-	-	-
CLDAFOJD_02001	0.0	-	-	-	S	-	-	-	von Willebrand factor type A domain
CLDAFOJD_02002	0.0	-	-	-	S	-	-	-	Aerotolerance regulator N-terminal
CLDAFOJD_02003	5.75e-208	-	-	-	S	-	-	-	Protein of unknown function DUF58
CLDAFOJD_02004	0.0	-	-	-	S	-	-	-	ABC-type transport system involved in multi-copper enzyme maturation permease component
CLDAFOJD_02005	1.78e-241	-	-	-	V	-	-	-	ATPases associated with a variety of cellular activities
CLDAFOJD_02006	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_02007	1.49e-237	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
CLDAFOJD_02008	2.1e-296	-	-	-	S	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
CLDAFOJD_02010	1.63e-239	-	-	-	E	-	-	-	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CLDAFOJD_02012	5.75e-202	-	-	-	O	-	-	-	stress-induced mitochondrial fusion
CLDAFOJD_02013	3.62e-204	-	-	-	S	ko:K07071	-	ko00000	Domain of unknown function (DUF1731)
CLDAFOJD_02014	1.03e-121	-	-	-	M	ko:K03098	-	ko00000,ko04147	Lipocalin-like domain
CLDAFOJD_02015	1.35e-236	-	1.1.1.86	-	E	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CLDAFOJD_02016	3.41e-188	-	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
CLDAFOJD_02017	1.6e-151	-	-	-	K	-	-	-	Transcriptional regulator
CLDAFOJD_02018	1.35e-264	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
CLDAFOJD_02020	0.0	-	-	-	P	-	-	-	Sulfatase
CLDAFOJD_02021	1.26e-79	divIC	-	-	D	ko:K05589,ko:K13052	-	ko00000,ko03036	cell cycle
CLDAFOJD_02022	4.6e-305	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CLDAFOJD_02023	0.0	-	-	-	E	-	-	-	Aminotransferase class I and II
CLDAFOJD_02024	3.56e-219	-	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CLDAFOJD_02025	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Alpha galactosidase A
CLDAFOJD_02026	1.04e-49	-	-	-	-	-	-	-	-
CLDAFOJD_02027	1.45e-55	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L28 family
CLDAFOJD_02028	4.69e-236	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
CLDAFOJD_02029	2.13e-96	-	-	-	L	ko:K07447	-	ko00000,ko01000	Likely ribonuclease with RNase H fold.
CLDAFOJD_02030	9.8e-259	-	2.7.7.13	-	M	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
CLDAFOJD_02031	2.5e-172	-	2.5.1.31	-	I	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CLDAFOJD_02032	0.0	-	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	TopoisomeraseII
CLDAFOJD_02033	8.53e-211	ispE	2.7.1.148	-	I	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
CLDAFOJD_02035	0.0	-	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	HELICc2
CLDAFOJD_02036	2.79e-178	cbiO	-	-	P	ko:K02006,ko:K02008,ko:K16784,ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPase activity
CLDAFOJD_02037	2.32e-193	cbiQ	-	-	P	ko:K02007,ko:K02008	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transmembrane transporter activity
CLDAFOJD_02038	8.77e-239	cbiM	-	-	P	ko:K02007,ko:K02009,ko:K16915	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt ion transport
CLDAFOJD_02040	8.06e-18	-	-	-	S	-	-	-	Lipocalin-like
CLDAFOJD_02041	3.2e-209	argB	2.7.2.8	-	E	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Amino acid kinase family
CLDAFOJD_02042	1.05e-226	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CLDAFOJD_02043	1.06e-94	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L9, N-terminal domain
CLDAFOJD_02044	0.0	-	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	AICARFT/IMPCHase bienzyme
CLDAFOJD_02045	1.33e-171	pdxJ	2.6.99.2	-	H	ko:K03474	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CLDAFOJD_02046	9.05e-85	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	4'-phosphopantetheinyl transferase superfamily
CLDAFOJD_02048	0.0	pckG	4.1.1.32	-	C	ko:K01596	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko03320,ko04068,ko04151,ko04152,ko04910,ko04920,ko04922,ko04931,ko04964,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map03320,map04068,map04151,map04152,map04910,map04920,map04922,map04931,map04964	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle
CLDAFOJD_02049	1.15e-165	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	PFAM N-acetylmuramoyl-L-alanine amidase family 2
CLDAFOJD_02050	0.0	-	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	RecG wedge domain
CLDAFOJD_02052	0.0	-	-	-	C	ko:K00184	-	ko00000	4Fe-4S dicluster domain
CLDAFOJD_02053	2.16e-180	-	-	-	C	-	-	-	Cytochrome c7 and related cytochrome c
CLDAFOJD_02054	2.09e-302	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CLDAFOJD_02056	6.34e-255	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Iron-containing alcohol dehydrogenase
CLDAFOJD_02058	1.23e-187	-	5.2.1.8	-	O	ko:K03773	-	ko00000,ko01000,ko03110	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
CLDAFOJD_02059	4.4e-138	-	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CLDAFOJD_02060	1.42e-271	-	-	-	E	ko:K19689	-	ko00000,ko01000,ko01002	Thermophilic metalloprotease (M29)
CLDAFOJD_02061	2.54e-208	-	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
CLDAFOJD_02062	0.0	-	-	-	P	ko:K03455	-	ko00000	TrkA-N domain
CLDAFOJD_02063	1.2e-167	-	-	-	L	ko:K03424	-	ko00000,ko01000	TatD related DNase
CLDAFOJD_02069	7.72e-133	panZ	-	-	K	-	-	-	-acetyltransferase
CLDAFOJD_02070	1.96e-224	-	-	-	E	ko:K00612	-	ko00000,ko01000	lipolytic protein G-D-S-L family
CLDAFOJD_02071	1.02e-220	-	1.8.1.9	-	O	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Pyridine nucleotide-disulphide oxidoreductase
CLDAFOJD_02072	0.0	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase alpha chain
CLDAFOJD_02073	5.5e-176	-	-	-	-	-	-	-	-
CLDAFOJD_02075	4.49e-241	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLDAFOJD_02076	2.63e-208	-	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Polyprenyl synthetase
CLDAFOJD_02077	1.19e-199	-	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Quinolinate phosphoribosyl transferase, N-terminal domain
CLDAFOJD_02078	3.45e-157	-	1.4.3.5	-	H	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)
CLDAFOJD_02079	1.42e-210	-	5.1.3.15	-	G	ko:K01792	ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Aldose 1-epimerase
CLDAFOJD_02080	0.0	-	-	-	G	-	-	-	Trehalase
CLDAFOJD_02081	0.0	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
CLDAFOJD_02082	0.0	glnA	6.3.1.2	-	S	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
CLDAFOJD_02083	1.1e-34	-	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L34
CLDAFOJD_02084	4.9e-76	-	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	Ribonuclease P
CLDAFOJD_02085	4.61e-61	-	-	-	S	ko:K08998	-	ko00000	Haemolytic
CLDAFOJD_02086	0.0	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
CLDAFOJD_02087	0.0	-	1.4.1.13, 1.4.1.14	-	E	ko:K00265	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	GXGXG motif
CLDAFOJD_02088	0.0	glnA	6.3.1.2	-	S	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
CLDAFOJD_02089	0.0	-	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CLDAFOJD_02090	1.09e-272	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase small chain, CPSase domain
CLDAFOJD_02091	6.96e-265	-	4.2.1.47	-	M	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CLDAFOJD_02092	1.03e-265	fcl	1.1.1.271	-	GM	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
CLDAFOJD_02093	1.45e-296	-	-	-	C	-	-	-	Na+/H+ antiporter family
CLDAFOJD_02094	1.11e-236	-	-	-	-	-	-	-	-
CLDAFOJD_02095	4.84e-229	-	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphomannose isomerase type I
CLDAFOJD_02096	1.29e-181	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	PFAM N-acetylmuramoyl-L-alanine amidase family 2
CLDAFOJD_02097	5.31e-115	ispF	4.6.1.12	-	I	ko:K01770	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
CLDAFOJD_02098	8.31e-186	-	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase family
CLDAFOJD_02099	0.0	-	-	-	M	-	-	-	PFAM glycosyl transferase family 51
CLDAFOJD_02100	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
CLDAFOJD_02101	1.26e-96	-	-	-	U	ko:K03559	-	ko00000,ko02000	Biopolymer transport protein ExbD/TolR
CLDAFOJD_02102	8.63e-181	-	-	-	U	ko:K03561	-	ko00000,ko02000	MotA/TolQ/ExbB proton channel family
CLDAFOJD_02103	0.0	-	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CLDAFOJD_02104	1.27e-99	-	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Predicted SPOUT methyltransferase
CLDAFOJD_02105	1.67e-86	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S9/S16
CLDAFOJD_02106	2.79e-97	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CLDAFOJD_02107	6.12e-40	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CLDAFOJD_02108	0.0	nnrD	4.2.1.136, 5.1.99.6	-	G	ko:K17758,ko:K17759	-	ko00000,ko01000	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CLDAFOJD_02109	1.69e-174	-	-	-	L	ko:K03630	-	ko00000	RadC-like JAB domain
CLDAFOJD_02111	4.03e-174	-	-	-	D	-	-	-	Phage-related minor tail protein
CLDAFOJD_02113	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CLDAFOJD_02114	8.25e-63	-	-	-	L	ko:K09747	-	ko00000	YbaB/EbfC DNA-binding family
CLDAFOJD_02115	1.89e-253	-	-	-	N	ko:K18353	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01504	Endonuclease Exonuclease Phosphatase
CLDAFOJD_02116	0.0	-	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	DHHA2
CLDAFOJD_02118	5.46e-189	-	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
CLDAFOJD_02119	0.0	-	-	-	S	-	-	-	OPT oligopeptide transporter protein
CLDAFOJD_02120	0.000969	-	-	-	-	-	-	-	-
CLDAFOJD_02121	0.0	-	-	-	G	-	-	-	Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain
CLDAFOJD_02122	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLDAFOJD_02123	0.0	-	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	DNA Topoisomerase IV
CLDAFOJD_02124	1.37e-149	-	-	-	C	-	-	-	lactate oxidation
CLDAFOJD_02125	5.05e-297	-	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Peptidase family U32
CLDAFOJD_02126	1.99e-19	-	3.5.3.1	-	E	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	ko00000,ko00001,ko00002,ko01000	COG0010 Arginase agmatinase formimionoglutamate hydrolase arginase family
CLDAFOJD_02127	0.0	-	-	-	U	-	-	-	Involved in the tonB-independent uptake of proteins
CLDAFOJD_02128	0.0	-	-	-	C	-	-	-	cytochrome C peroxidase
CLDAFOJD_02129	2.31e-280	-	-	-	J	-	-	-	PFAM Endoribonuclease L-PSP
CLDAFOJD_02131	0.0	-	1.8.1.2	-	P	ko:K00381	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Nitrite and sulphite reductase 4Fe-4S domain
CLDAFOJD_02132	1.89e-182	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLDAFOJD_02133	2.4e-188	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLDAFOJD_02134	6.15e-260	-	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	NMT1/THI5 like
CLDAFOJD_02135	0.0	-	2.7.1.25, 2.7.7.4	-	P	ko:K00955	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily
CLDAFOJD_02136	1.73e-216	-	2.7.7.4	-	EH	ko:K00957	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoadenosine phosphosulfate reductase family
CLDAFOJD_02137	8.78e-172	-	1.8.4.10, 1.8.4.8	-	EH	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Phosphoadenosine phosphosulfate reductase family
CLDAFOJD_02138	1.31e-214	-	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
CLDAFOJD_02139	8.01e-153	phoU	-	-	P	ko:K02039	-	ko00000	negative regulation of phosphate transmembrane transport
CLDAFOJD_02140	4.85e-185	-	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CLDAFOJD_02141	0.0	-	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLDAFOJD_02142	0.0	pstC	-	-	P	ko:K02037,ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLDAFOJD_02143	1.51e-221	-	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	PBP superfamily domain
CLDAFOJD_02144	6.37e-186	-	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CLDAFOJD_02145	8.65e-140	-	-	-	P	ko:K02039	-	ko00000	PhoU domain
CLDAFOJD_02146	2.5e-233	-	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
CLDAFOJD_02147	7.65e-101	-	-	-	M	ko:K06077	-	ko00000	Glycine zipper 2TM domain
CLDAFOJD_02149	0.0	-	-	-	S	ko:K07263	-	ko00000,ko01000,ko01002	Insulinase (Peptidase family M16)
CLDAFOJD_02150	3.88e-152	-	-	-	H	-	-	-	HD superfamily hydrolase involved in NAD metabolism
CLDAFOJD_02151	2.84e-35	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
CLDAFOJD_02152	6.31e-105	-	-	-	EG	-	-	-	membrane
CLDAFOJD_02153	1.37e-94	-	-	-	C	-	-	-	Nitroreductase family
CLDAFOJD_02154	1.52e-16	-	-	-	C	-	-	-	Nitroreductase family
CLDAFOJD_02155	6.58e-225	-	-	-	L	-	-	-	Elongator protein 3, MiaB family, Radical SAM
CLDAFOJD_02156	1.44e-229	-	-	-	J	-	-	-	Belongs to the universal ribosomal protein uS2 family
CLDAFOJD_02157	7.2e-103	-	-	-	K	-	-	-	DNA-binding transcription factor activity
CLDAFOJD_02158	9.17e-70	-	-	-	M	-	-	-	Polymer-forming cytoskeletal
CLDAFOJD_02159	5.11e-120	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CLDAFOJD_02160	4.62e-165	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Amino acid kinase family
CLDAFOJD_02161	5.98e-211	-	-	-	M	-	-	-	Mechanosensitive ion channel
CLDAFOJD_02162	3.6e-152	-	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	C-terminal domain of 1-Cys peroxiredoxin
CLDAFOJD_02163	0.0	-	-	-	S	-	-	-	Sodium:neurotransmitter symporter family
CLDAFOJD_02164	0.0	-	-	-	-	-	-	-	-
CLDAFOJD_02165	2.37e-46	-	-	-	J	-	-	-	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CLDAFOJD_02166	3.08e-146	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CLDAFOJD_02168	1.12e-305	-	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
CLDAFOJD_02169	9.82e-110	msrB	1.8.4.11, 1.8.4.12	-	O	ko:K07305,ko:K12267	-	ko00000,ko01000	peptide-methionine (R)-S-oxide reductase activity
CLDAFOJD_02170	4.16e-259	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CLDAFOJD_02171	1.11e-299	nupG	-	-	G	ko:K03289,ko:K03301,ko:K08218,ko:K11537	ko01501,map01501	ko00000,ko00001,ko00002,ko02000	Major facilitator Superfamily
CLDAFOJD_02174	1.07e-246	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CLDAFOJD_02175	1.03e-243	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CLDAFOJD_02176	0.0	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLDAFOJD_02177	5.59e-227	-	-	-	M	ko:K01993	-	ko00000	HlyD family secretion protein
CLDAFOJD_02178	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CLDAFOJD_02179	3.85e-194	-	2.7.8.8	-	I	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	CDP-alcohol phosphatidyltransferase
CLDAFOJD_02180	4.03e-120	-	-	-	-	-	-	-	-
CLDAFOJD_02181	2.15e-198	-	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CLDAFOJD_02182	0.0	-	-	-	M	-	-	-	Bacterial membrane protein, YfhO
CLDAFOJD_02183	0.0	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	GcpE protein
CLDAFOJD_02184	2.7e-147	-	-	-	IQ	-	-	-	RmlD substrate binding domain
CLDAFOJD_02185	9.28e-139	-	-	-	-	-	-	-	-
CLDAFOJD_02186	0.0	-	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
CLDAFOJD_02187	3.62e-121	-	5.2.1.8	-	O	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CLDAFOJD_02188	7.48e-188	-	-	-	O	ko:K04083	-	ko00000,ko03110	Hsp33 protein
CLDAFOJD_02191	3.56e-234	-	-	-	E	-	-	-	PFAM lipolytic protein G-D-S-L family
CLDAFOJD_02195	1.69e-129	-	-	-	U	ko:K05595	-	ko00000,ko02000	MarC family integral membrane protein
CLDAFOJD_02196	5.94e-178	-	4.2.99.20	-	I	ko:K08680	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Alpha/beta hydrolase family
CLDAFOJD_02197	1.46e-75	-	-	-	S	ko:K09954	-	ko00000	Putative quorum-sensing-regulated virulence factor
CLDAFOJD_02199	1.24e-51	-	-	-	-	-	-	-	-
CLDAFOJD_02200	4.19e-133	-	-	-	S	-	-	-	Protein of unknown function (DUF2589)
CLDAFOJD_02201	3.79e-182	-	-	-	-	-	-	-	-
CLDAFOJD_02202	2.59e-174	-	-	-	S	-	-	-	Protein of unknown function (DUF2589)
CLDAFOJD_02203	4.44e-110	-	-	-	KT	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	phosphorelay signal transduction system
CLDAFOJD_02204	1.66e-304	-	-	-	C	-	-	-	4 iron, 4 sulfur cluster binding
CLDAFOJD_02205	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
CLDAFOJD_02206	1.55e-221	-	-	-	K	-	-	-	Transcriptional regulator
CLDAFOJD_02207	1.05e-178	-	-	-	C	-	-	-	aldo keto reductase
CLDAFOJD_02208	2.06e-186	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CLDAFOJD_02209	5.85e-275	-	-	-	S	ko:K06889	-	ko00000	X-Pro dipeptidyl-peptidase (S15 family)
CLDAFOJD_02210	5.83e-310	-	-	-	C	-	-	-	Carboxymuconolactone decarboxylase family
CLDAFOJD_02211	2.95e-159	-	-	-	IQ	-	-	-	Short chain dehydrogenase
CLDAFOJD_02212	3.57e-28	corC_1	-	-	P	ko:K03699	-	ko00000,ko02042	Transporter associated domain
CLDAFOJD_02214	4.21e-137	-	-	-	J	ko:K05808	-	ko00000,ko03009	Sigma 54 modulation/S30EA ribosomal protein C terminus
CLDAFOJD_02216	4.11e-08	-	-	-	M	-	-	-	major outer membrane lipoprotein
CLDAFOJD_02217	0.0	-	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
CLDAFOJD_02219	2.57e-170	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	KR domain
CLDAFOJD_02220	1.58e-307	-	-	-	C	-	-	-	Sulfatase-modifying factor enzyme 1
CLDAFOJD_02221	1.43e-11	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLDAFOJD_02223	1.15e-05	-	-	-	-	-	-	-	-
CLDAFOJD_02225	7.45e-49	XK27_09985	-	-	S	-	-	-	Protein of unknown function (DUF1232)
CLDAFOJD_02226	3.37e-193	-	-	-	S	ko:K07051	-	ko00000	TatD related DNase
CLDAFOJD_02227	8.94e-56	-	-	-	-	-	-	-	-
CLDAFOJD_02228	4.83e-163	-	-	-	-	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002	-
CLDAFOJD_02229	0.0	-	1.3.5.1, 1.3.5.4	-	C	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	Fumarate reductase flavoprotein C-term
CLDAFOJD_02230	1.29e-187	-	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	2Fe-2S iron-sulfur cluster binding domain
CLDAFOJD_02231	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLDAFOJD_02233	3.69e-64	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CLDAFOJD_02234	9.92e-110	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CLDAFOJD_02235	8.25e-155	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CLDAFOJD_02236	2.58e-93	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CLDAFOJD_02237	6.29e-135	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CLDAFOJD_02238	3.61e-46	-	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	SecE/Sec61-gamma subunits of protein translocation complex
CLDAFOJD_02240	9.94e-287	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CLDAFOJD_02242	1.44e-255	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CLDAFOJD_02243	0.0	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CLDAFOJD_02244	1.02e-152	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CLDAFOJD_02245	2.93e-282	tig	-	-	O	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CLDAFOJD_02246	0.0	-	-	-	M	ko:K07277	-	ko00000,ko02000,ko03029	Surface antigen
CLDAFOJD_02247	3.01e-153	-	1.14.11.27	-	P	ko:K10277	-	ko00000,ko01000,ko03036	peptidyl-arginine hydroxylation
CLDAFOJD_02248	2.6e-231	-	1.5.1.20	-	E	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
CLDAFOJD_02249	5.61e-168	-	-	-	CO	-	-	-	Protein conserved in bacteria
CLDAFOJD_02251	3.44e-146	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLDAFOJD_02252	0.0	-	-	-	P	ko:K07239	-	ko00000	AcrB/AcrD/AcrF family
CLDAFOJD_02253	6.53e-296	czcB	-	-	M	ko:K15727	-	ko00000,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLDAFOJD_02254	7.45e-296	-	-	-	MU	ko:K15725	-	ko00000,ko02000	efflux transmembrane transporter activity
CLDAFOJD_02256	1.83e-205	-	-	-	G	ko:K06867,ko:K07001	-	ko00000	response to abiotic stimulus
CLDAFOJD_02257	0.0	-	-	-	E	-	-	-	PFAM major facilitator superfamily MFS_1
CLDAFOJD_02260	1.36e-214	-	-	-	KQ	-	-	-	Hypothetical methyltransferase
CLDAFOJD_02261	2.18e-290	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CLDAFOJD_02262	0.0	ahcY	3.3.1.1	-	H	ko:K01251	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CLDAFOJD_02263	3.5e-249	rgpB	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
CLDAFOJD_02265	6.21e-39	-	-	-	-	-	-	-	-
CLDAFOJD_02266	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CLDAFOJD_02268	9.83e-235	-	-	-	CO	-	-	-	Thioredoxin-like
CLDAFOJD_02269	0.0	-	-	-	P	-	-	-	Domain of unknown function (DUF4976)
CLDAFOJD_02270	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycoside hydrolase, family 20, catalytic core
CLDAFOJD_02271	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class I (C) catalytic domain
CLDAFOJD_02272	2.27e-75	-	-	-	G	-	-	-	Cupin 2, conserved barrel domain protein
CLDAFOJD_02273	5.74e-211	ybfH	-	-	EG	-	-	-	spore germination
CLDAFOJD_02274	1.11e-05	-	-	-	L	-	-	-	RelB antitoxin
CLDAFOJD_02275	2.01e-39	-	-	-	D	-	-	-	Plasmid stabilization system
CLDAFOJD_02276	5.57e-47	-	-	-	D	-	-	-	toxin-antitoxin pair type II binding
CLDAFOJD_02277	7.46e-312	-	-	-	L	-	-	-	Transposase
CLDAFOJD_02278	2.24e-149	-	-	-	-	-	-	-	-
CLDAFOJD_02279	4.9e-221	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLDAFOJD_02281	1.12e-120	-	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain
CLDAFOJD_02284	1.1e-50	-	-	-	-	-	-	-	-
CLDAFOJD_02285	5.64e-22	-	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
CLDAFOJD_02286	2.37e-23	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
CLDAFOJD_02294	4.14e-55	-	-	-	-	-	-	-	-
CLDAFOJD_02295	7.64e-307	-	-	-	S	ko:K06919	-	ko00000	Phage plasmid primase, P4 family
CLDAFOJD_02297	6.3e-274	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
CLDAFOJD_02298	1.21e-149	-	-	-	-	-	-	-	-
CLDAFOJD_02299	2.63e-45	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
CLDAFOJD_02302	3.56e-61	-	-	-	L	-	-	-	TniQ
CLDAFOJD_02303	1.28e-190	-	-	-	S	-	-	-	Bacterial TniB protein
CLDAFOJD_02304	1.41e-43	-	-	-	-	-	-	-	-
CLDAFOJD_02305	9.13e-168	-	-	-	L	ko:K07497	-	ko00000	Integrase
CLDAFOJD_02312	1.69e-42	-	-	-	D	-	-	-	Psort location Cytoplasmic, score
CLDAFOJD_02314	1.97e-75	-	-	-	L	-	-	-	Initiator Replication protein
CLDAFOJD_02317	3.57e-85	-	-	-	K	-	-	-	Belongs to the ParB family
CLDAFOJD_02318	2.43e-81	-	-	-	D	-	-	-	Plasmid recombination enzyme
CLDAFOJD_02319	2.57e-146	-	-	-	L	-	-	-	AAA domain
CLDAFOJD_02320	5.88e-73	-	-	-	L	-	-	-	Transposase IS66 family
CLDAFOJD_02321	2.94e-18	-	-	-	L	-	-	-	L COG5421 Transposase
CLDAFOJD_02322	4.88e-79	-	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
CLDAFOJD_02323	9.72e-82	-	-	-	-	-	-	-	-
CLDAFOJD_02324	4.7e-90	-	-	-	L	ko:K07484	-	ko00000	IS66 Orf2 like protein
CLDAFOJD_02325	0.0	-	-	-	L	-	-	-	Transposase IS66 family
CLDAFOJD_02326	6.57e-54	-	-	-	L	-	-	-	IstB domain protein ATP-binding protein
CLDAFOJD_02327	1.02e-34	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
CLDAFOJD_02328	1.69e-134	-	-	-	L	-	-	-	transposase IS116 IS110 IS902 family protein
CLDAFOJD_02329	3.01e-99	-	-	-	S	-	-	-	Virulence-associated protein E
CLDAFOJD_02330	1.09e-38	-	-	-	-	-	-	-	-
CLDAFOJD_02331	0.0	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CLDAFOJD_02332	2.97e-76	-	-	-	S	-	-	-	Domain of unknown function (DUF3846)
CLDAFOJD_02333	3.01e-207	-	-	-	S	-	-	-	Replication initiator protein A (RepA) N-terminus
CLDAFOJD_02337	1.38e-65	-	-	-	U	-	-	-	PrgI family protein
CLDAFOJD_02339	1.08e-19	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLDAFOJD_02340	2.45e-05	-	-	-	L	-	-	-	Phage integrase family
CLDAFOJD_02341	1.75e-123	xerD	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
CLDAFOJD_02342	1.29e-20	xerD	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
CLDAFOJD_02343	7.23e-139	-	-	-	L	-	-	-	PFAM integrase
CLDAFOJD_02344	1.16e-114	-	-	-	L	-	-	-	Transposase
CLDAFOJD_02347	0.0	-	-	-	M	-	-	-	Cna B domain protein
CLDAFOJD_02348	3.14e-250	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CLDAFOJD_02350	1.72e-66	rpiA	5.3.1.6	-	K	ko:K01807,ko:K02444	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko03000	DNA-binding transcription factor activity
CLDAFOJD_02351	6.62e-161	-	-	-	K	-	-	-	ParB-like nuclease domain
CLDAFOJD_02352	1.3e-69	-	-	-	K	-	-	-	DeoR-like helix-turn-helix domain
CLDAFOJD_02353	2.66e-81	-	-	-	D	-	-	-	MobA/MobL family
CLDAFOJD_02358	2.28e-51	-	-	-	S	-	-	-	Transposon-encoded protein TnpV
CLDAFOJD_02359	4.7e-16	-	-	-	L	-	-	-	Phage integrase family
CLDAFOJD_02360	1.41e-182	-	-	-	L	-	-	-	Phage integrase family
CLDAFOJD_02361	0.0	-	-	-	J	-	-	-	GTP binding
CLDAFOJD_02363	2.34e-201	-	-	-	L	-	-	-	Transposase DDE domain group 1
CLDAFOJD_02364	2.55e-152	-	-	-	L	-	-	-	PFAM integrase
CLDAFOJD_02365	3.88e-17	-	-	-	L	-	-	-	Bacterial dnaA protein
CLDAFOJD_02366	7.04e-85	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CLDAFOJD_02367	9.72e-136	-	-	-	L	-	-	-	PFAM Transposase IS116 IS110 IS902 family
CLDAFOJD_02368	1.15e-153	-	-	-	L	-	-	-	PFAM Transposase IS116 IS110 IS902 family
CLDAFOJD_02369	4.55e-113	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
CLDAFOJD_02370	1.39e-32	-	-	-	S	-	-	-	Transposon-encoded protein TnpW
CLDAFOJD_02371	1.9e-137	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
CLDAFOJD_02372	1.53e-160	-	-	-	S	-	-	-	Transposase IS66 family
CLDAFOJD_02373	1.57e-30	-	-	-	-	-	-	-	-
CLDAFOJD_02374	1.56e-112	-	-	-	K	-	-	-	DNA-templated transcription, initiation
CLDAFOJD_02376	1.44e-200	-	-	-	L	-	-	-	Domain of unknown function (DUF4368)
CLDAFOJD_02377	1.43e-210	-	-	-	L	-	-	-	Integrase core domain
CLDAFOJD_02378	3.79e-83	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
CLDAFOJD_02379	3.71e-11	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
CLDAFOJD_02384	1.16e-304	-	-	-	L	-	-	-	DDE superfamily endonuclease
CLDAFOJD_02385	6.32e-266	-	-	-	I	-	-	-	Prenyltransferase and squalene oxidase repeat
CLDAFOJD_02388	2.79e-153	-	-	-	Q	-	-	-	Methyltransferase domain
CLDAFOJD_02391	2.98e-68	-	-	-	-	-	-	-	-
CLDAFOJD_02393	1.35e-38	-	-	-	-	-	-	-	-
CLDAFOJD_02394	1.26e-60	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
CLDAFOJD_02395	7.9e-29	-	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CLDAFOJD_02396	3.91e-52	-	-	-	-	-	-	-	-