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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PAFIPGJD_00001	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAFIPGJD_00002	4.69e-79	rsfS	-	-	S	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAFIPGJD_00003	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAFIPGJD_00005	6.38e-258	-	-	-	S	-	-	-	AAA domain, putative AbiEii toxin, Type IV TA system
PAFIPGJD_00006	4.36e-200	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Enoyl-CoA hydratase/isomerase
PAFIPGJD_00009	1.85e-302	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	efflux transmembrane transporter activity
PAFIPGJD_00013	9.85e-147	-	-	-	V	-	-	-	ATPases associated with a variety of cellular activities
PAFIPGJD_00016	0.0	-	-	-	V	-	-	-	ABC-2 type transporter
PAFIPGJD_00017	8.38e-98	-	-	-	-	-	-	-	-
PAFIPGJD_00018	3.14e-192	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
PAFIPGJD_00019	0.0	-	-	-	S	-	-	-	Fungal chitosanase of glycosyl hydrolase group 75
PAFIPGJD_00020	9.68e-221	-	2.5.1.21	-	I	ko:K00801	ko00100,ko00909,ko01100,ko01110,ko01130,map00100,map00909,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko01006	Squalene/phytoene synthase
PAFIPGJD_00021	0.0	-	-	-	KT	ko:K02584	ko02020,map02020	ko00000,ko00001,ko03000	Bacterial regulatory protein, Fis family
PAFIPGJD_00022	6.28e-154	-	-	-	P	ko:K03281	-	ko00000	Voltage gated chloride channel
PAFIPGJD_00025	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	PFAM Glycoside hydrolase, family 20, catalytic core
PAFIPGJD_00027	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_00028	0.0	-	4.1.1.15	-	E	ko:K01580	ko00250,ko00410,ko00430,ko00650,ko01100,ko01110,ko01120,ko02024,ko04727,ko04940,map00250,map00410,map00430,map00650,map01100,map01110,map01120,map02024,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Pyridoxal-dependent decarboxylase conserved domain
PAFIPGJD_00029	5.21e-142	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAFIPGJD_00030	0.0	-	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase alpha chain like domain
PAFIPGJD_00031	4.25e-238	pyrD	1.3.5.2	-	F	ko:K00254	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Dihydroorotate dehydrogenase
PAFIPGJD_00032	4.7e-156	-	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Thiamine monophosphate synthase
PAFIPGJD_00033	1.1e-159	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAFIPGJD_00034	1.63e-164	-	-	-	CO	-	-	-	Thioredoxin-like
PAFIPGJD_00035	0.0	-	-	-	C	-	-	-	Cytochrome c554 and c-prime
PAFIPGJD_00036	3.4e-311	-	-	-	S	-	-	-	PFAM CBS domain containing protein
PAFIPGJD_00037	9.05e-313	tlyC	-	-	S	ko:K03699	-	ko00000,ko02042	PFAM CBS domain containing protein
PAFIPGJD_00038	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PAFIPGJD_00039	3.01e-49	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal_S15
PAFIPGJD_00040	2.32e-151	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PAFIPGJD_00041	2.46e-215	-	-	-	D	ko:K19234,ko:K19236	ko01503,map01503	ko00000,ko00001,ko01002,ko01011	ErfK ybiS ycfS ynhG family protein
PAFIPGJD_00042	0.0	-	-	-	S	-	-	-	Terminase
PAFIPGJD_00045	7.54e-201	-	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAFIPGJD_00046	1.04e-144	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAFIPGJD_00047	9.86e-168	-	-	-	M	-	-	-	Peptidase family M23
PAFIPGJD_00048	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	PFAM coagulation factor 5 8 type domain protein
PAFIPGJD_00050	1.33e-174	-	-	-	NU	-	-	-	Prepilin-type N-terminal cleavage methylation domain
PAFIPGJD_00051	1.16e-178	rph	2.7.7.56	-	J	ko:K00989	-	ko00000,ko01000,ko03016	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PAFIPGJD_00052	0.0	-	-	-	S	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
PAFIPGJD_00053	0.0	-	-	-	G	-	-	-	beta-N-acetylhexosaminidase activity
PAFIPGJD_00054	6.94e-153	-	6.3.3.3	-	H	ko:K01935	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	AAA domain
PAFIPGJD_00056	4.86e-201	-	-	-	S	-	-	-	DisA bacterial checkpoint controller nucleotide-binding
PAFIPGJD_00057	6.25e-144	-	-	-	-	-	-	-	-
PAFIPGJD_00058	6.38e-151	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAFIPGJD_00059	3.42e-196	panC	6.3.2.1	-	H	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PAFIPGJD_00060	1.48e-120	-	-	-	M	ko:K06142	-	ko00000	Outer membrane protein (OmpH-like)
PAFIPGJD_00061	5.68e-188	lpxD	2.3.1.191	-	M	ko:K02536	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PAFIPGJD_00062	1.2e-196	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAFIPGJD_00063	5.69e-190	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAFIPGJD_00064	6.06e-251	-	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	NMT1/THI5 like
PAFIPGJD_00066	3.48e-223	hyl	2.3.1.48, 3.2.1.169, 3.2.1.35	GH84	G	ko:K01197,ko:K15719	ko00531,ko01100,ko04931,map00531,map01100,map04931	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylhexosaminidase activity
PAFIPGJD_00067	6.23e-118	-	3.1.3.82, 3.1.3.83	-	E	ko:K03273	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Polynucleotide kinase 3 phosphatase
PAFIPGJD_00068	8.25e-131	-	5.3.1.28	-	G	ko:K03271	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	SIS domain
PAFIPGJD_00069	0.0	-	2.7.1.167, 2.7.7.70	-	M	ko:K03272	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	pfkB family carbohydrate kinase
PAFIPGJD_00070	1.06e-44	-	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S21
PAFIPGJD_00071	1.05e-311	hemL	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-III
PAFIPGJD_00072	5.67e-258	-	-	-	S	-	-	-	ankyrin repeats
PAFIPGJD_00073	0.0	-	-	-	EGP	-	-	-	Sugar (and other) transporter
PAFIPGJD_00074	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_00075	0.0	glnS	6.1.1.18	-	J	ko:K01886	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class I (E and Q), anti-codon binding domain
PAFIPGJD_00076	9.59e-288	-	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase II
PAFIPGJD_00077	8.55e-104	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PAFIPGJD_00078	8.13e-206	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAFIPGJD_00079	1.1e-197	-	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	SRP54-type protein, GTPase domain
PAFIPGJD_00080	6.16e-261	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Elongator protein 3, MiaB family, Radical SAM
PAFIPGJD_00081	0.0	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	DnaB-like helicase C terminal domain
PAFIPGJD_00082	1.6e-182	-	-	-	U	ko:K20276	ko02024,map02024	ko00000,ko00001	domain, Protein
PAFIPGJD_00083	5.7e-153	-	-	-	O	-	-	-	methyltransferase activity
PAFIPGJD_00084	7.21e-290	-	3.5.1.42	-	S	ko:K03742	ko00760,map00760	ko00000,ko00001,ko01000	Competence-damaged protein
PAFIPGJD_00085	0.0	-	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Pyruvate kinase, barrel domain
PAFIPGJD_00086	4.37e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAFIPGJD_00090	4.02e-191	-	-	-	E	-	-	-	haloacid dehalogenase-like hydrolase
PAFIPGJD_00091	4.36e-142	-	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S4/S9 N-terminal domain
PAFIPGJD_00092	2.11e-121	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAFIPGJD_00093	1.11e-79	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAFIPGJD_00094	1.59e-269	-	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Domain of unknown function (DUF1730)
PAFIPGJD_00095	1.18e-224	-	-	-	M	ko:K07276	-	ko00000	Mitochondrial fission ELM1
PAFIPGJD_00096	3.98e-247	-	-	-	M	-	-	-	Glycosyl transferase 4-like
PAFIPGJD_00097	6.26e-269	-	-	-	LU	ko:K04096	-	ko00000	DNA recombination-mediator protein A
PAFIPGJD_00098	9.59e-216	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PAFIPGJD_00099	1.11e-261	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAFIPGJD_00100	2.85e-267	gcvT	2.1.2.10	-	E	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Aminomethyltransferase folate-binding domain
PAFIPGJD_00101	6.67e-86	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PAFIPGJD_00102	0.0	gcvP	1.4.4.2	-	E	ko:K00281	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PAFIPGJD_00104	6.18e-150	-	-	-	L	-	-	-	Membrane
PAFIPGJD_00105	0.0	-	-	-	P	ko:K01138	-	ko00000,ko01000	PA14 domain
PAFIPGJD_00106	0.0	-	3.6.4.13	-	L	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DbpA RNA binding domain
PAFIPGJD_00107	1.02e-174	-	-	-	-	-	-	-	-
PAFIPGJD_00108	0.0	-	3.1.1.53	-	E	ko:K05970	-	ko00000,ko01000	Carbohydrate esterase, sialic acid-specific acetylesterase
PAFIPGJD_00109	9.94e-243	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
PAFIPGJD_00110	1.84e-105	-	-	-	S	ko:K15977	-	ko00000	DoxX
PAFIPGJD_00111	4.75e-245	-	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	AIR synthase related protein, N-terminal domain
PAFIPGJD_00112	0.0	-	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PAFIPGJD_00113	1.26e-139	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
PAFIPGJD_00115	2.34e-208	-	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
PAFIPGJD_00116	1.31e-81	-	-	-	DJ	-	-	-	Addiction module toxin, RelE StbE family
PAFIPGJD_00117	8.37e-126	-	4.1.1.36	-	H	ko:K01598	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Flavoprotein
PAFIPGJD_00119	2.31e-259	-	-	-	M	-	-	-	Peptidase family M23
PAFIPGJD_00120	0.0	-	-	-	S	-	-	-	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
PAFIPGJD_00121	0.0	-	-	-	L	-	-	-	Polyphosphate kinase 2 (PPK2)
PAFIPGJD_00122	2.48e-173	-	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
PAFIPGJD_00123	1.94e-104	-	-	-	K	ko:K03826	-	ko00000,ko01000	acetyltransferase
PAFIPGJD_00124	9.7e-279	-	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class-V
PAFIPGJD_00125	2.4e-160	-	6.3.2.5	-	H	ko:K21977	ko00770,map00770	ko00000,ko00001,ko00002,ko01000	DNA / pantothenate metabolism flavoprotein
PAFIPGJD_00126	1.67e-272	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAFIPGJD_00127	9.68e-226	-	-	-	S	-	-	-	Aspartyl protease
PAFIPGJD_00128	1.18e-309	-	2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15	GT30	M	ko:K02527	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
PAFIPGJD_00129	3.35e-131	-	-	-	L	-	-	-	Conserved hypothetical protein 95
PAFIPGJD_00130	1.36e-175	-	-	-	-	-	-	-	-
PAFIPGJD_00132	2.58e-225	-	-	-	S	-	-	-	Polyphosphate kinase 2 (PPK2)
PAFIPGJD_00133	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_00134	0.0	-	-	-	M	-	-	-	Parallel beta-helix repeats
PAFIPGJD_00136	1.07e-199	-	-	-	S	ko:K06889	-	ko00000	alpha beta
PAFIPGJD_00137	1.65e-106	-	-	-	S	ko:K06925	-	ko00000,ko03016	Threonylcarbamoyl adenosine biosynthesis protein TsaE
PAFIPGJD_00138	1.93e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal prokaryotic L21 protein
PAFIPGJD_00139	2.14e-57	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L27 protein
PAFIPGJD_00140	6.78e-100	-	-	-	P	ko:K09825	-	ko00000,ko03000	Ferric uptake regulator family
PAFIPGJD_00141	8.34e-178	-	-	-	O	ko:K09013	-	ko00000,ko02000	ATPases associated with a variety of cellular activities
PAFIPGJD_00142	0.0	-	-	-	O	ko:K09014	-	ko00000	Uncharacterized protein family (UPF0051)
PAFIPGJD_00143	2.6e-296	-	-	-	O	ko:K09015	-	ko00000	Uncharacterized protein family (UPF0051)
PAFIPGJD_00144	0.0	-	-	-	M	-	-	-	Bacterial membrane protein, YfhO
PAFIPGJD_00145	0.0	-	-	-	P	-	-	-	Sulfatase
PAFIPGJD_00146	2.93e-233	-	2.8.1.6	-	H	ko:K01012	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Biotin and Thiamin Synthesis associated domain
PAFIPGJD_00147	0.0	-	2.6.1.62	-	H	ko:K00833	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-III
PAFIPGJD_00150	1.85e-75	-	-	-	P	ko:K03297,ko:K11741	-	ko00000,ko02000	Multidrug Resistance protein
PAFIPGJD_00151	1.08e-73	-	-	-	P	ko:K03297,ko:K11741	-	ko00000,ko02000	Multidrug Resistance protein
PAFIPGJD_00152	7.63e-220	-	-	-	M	-	-	-	Glycosyl transferase family 2
PAFIPGJD_00153	4.94e-114	flmH	2.3.1.57	-	J	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PAFIPGJD_00154	7.67e-285	-	2.6.1.59	-	M	ko:K02805	-	ko00000,ko01000,ko01007	DegT/DnrJ/EryC1/StrS aminotransferase family
PAFIPGJD_00155	4.27e-275	-	-	-	S	-	-	-	COGs COG4299 conserved
PAFIPGJD_00156	8.17e-124	sprT	-	-	K	-	-	-	SprT-like family
PAFIPGJD_00157	1.38e-139	-	-	-	-	-	-	-	-
PAFIPGJD_00158	1.24e-90	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PAFIPGJD_00159	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAFIPGJD_00160	4.5e-201	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAFIPGJD_00161	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAFIPGJD_00162	6.46e-86	-	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	ATP synthase delta (OSCP) subunit
PAFIPGJD_00163	4.38e-78	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	ATP synthase B/B' CF(0)
PAFIPGJD_00164	1.65e-11	-	-	-	S	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	PFAM H transporting two-sector ATPase C subunit
PAFIPGJD_00165	6.27e-219	-	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	ATP synthase A chain
PAFIPGJD_00166	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_00167	0.0	-	3.4.16.4	-	M	ko:K05515	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein dimerisation domain
PAFIPGJD_00168	5.1e-153	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
PAFIPGJD_00169	3.11e-271	-	-	-	S	-	-	-	COGs COG4299 conserved
PAFIPGJD_00170	0.0	-	-	-	G	-	-	-	Raffinose synthase or seed imbibition protein Sip1
PAFIPGJD_00172	4.09e-218	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAFIPGJD_00173	2.89e-223	-	-	-	-	-	-	-	-
PAFIPGJD_00174	3.67e-126	-	-	-	U	-	-	-	response to pH
PAFIPGJD_00175	9.39e-183	-	-	-	H	-	-	-	ThiF family
PAFIPGJD_00176	1.18e-224	-	5.3.1.13	-	M	ko:K06041	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	SIS domain
PAFIPGJD_00177	7.79e-192	-	-	-	-	-	-	-	-
PAFIPGJD_00178	2.76e-292	-	4.2.1.129, 5.4.99.17	-	I	ko:K06045	ko00909,ko01110,map00909,map01110	ko00000,ko00001,ko01000	PFAM Prenyltransferase squalene oxidase
PAFIPGJD_00179	1.06e-109	-	-	-	S	ko:K15977	-	ko00000	DoxX
PAFIPGJD_00180	1.34e-201	-	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Serine acetyltransferase, N-terminal
PAFIPGJD_00181	6.75e-305	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PAFIPGJD_00182	1.05e-180	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PAFIPGJD_00183	0.0	-	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PAFIPGJD_00184	0.0	-	-	-	K	-	-	-	Transcription elongation factor, N-terminal
PAFIPGJD_00185	1.89e-166	-	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	SAICAR synthetase
PAFIPGJD_00186	2.26e-115	-	-	-	-	-	-	-	-
PAFIPGJD_00187	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
PAFIPGJD_00188	7.5e-177	-	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	CobB/CobQ-like glutamine amidotransferase domain
PAFIPGJD_00190	2.24e-263	-	-	-	G	-	-	-	M42 glutamyl aminopeptidase
PAFIPGJD_00192	0.0	lacZ_17	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase activity
PAFIPGJD_00193	5.06e-236	-	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Actin
PAFIPGJD_00194	0.0	-	-	-	J	ko:K08301	-	ko00000,ko01000,ko03009,ko03019	Ribonuclease E/G family
PAFIPGJD_00195	8.99e-277	-	-	-	K	-	-	-	sequence-specific DNA binding
PAFIPGJD_00196	5.47e-195	-	-	-	-	-	-	-	-
PAFIPGJD_00197	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAFIPGJD_00199	4.52e-101	exbD2	-	-	U	ko:K03559	-	ko00000,ko02000	biopolymer transport protein
PAFIPGJD_00200	1.65e-113	aglS	-	-	U	ko:K03559	-	ko00000,ko02000	biopolymer transport protein
PAFIPGJD_00201	9.91e-171	-	-	-	U	ko:K03561	-	ko00000,ko02000	MotA/TolQ/ExbB proton channel family
PAFIPGJD_00202	2.15e-151	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAFIPGJD_00203	1.39e-157	-	-	-	S	-	-	-	3D domain
PAFIPGJD_00204	3.4e-229	-	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil DNA glycosylase superfamily
PAFIPGJD_00205	1.67e-177	-	4.1.1.48	-	E	ko:K01609	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Indole-3-glycerol phosphate synthase
PAFIPGJD_00207	4.83e-82	-	-	-	L	ko:K07460	-	ko00000	Uncharacterised protein family UPF0102
PAFIPGJD_00208	2.51e-151	-	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HII
PAFIPGJD_00209	4.77e-310	-	-	-	S	-	-	-	PFAM CBS domain containing protein
PAFIPGJD_00210	8.43e-59	-	-	-	S	-	-	-	Zinc ribbon domain
PAFIPGJD_00211	2.79e-54	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAFIPGJD_00213	2.9e-316	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Arginosuccinate synthase
PAFIPGJD_00214	9.36e-114	-	3.1.6.8	-	P	ko:K01134	ko00600,ko04142,map00600,map04142	ko00000,ko00001,ko01000	COG3119 Arylsulfatase A
PAFIPGJD_00215	2.6e-298	-	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	16S rRNA methyltransferase RsmB/F
PAFIPGJD_00216	4.82e-178	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAFIPGJD_00217	1.06e-163	-	-	-	NU	-	-	-	Prokaryotic N-terminal methylation motif
PAFIPGJD_00218	2.63e-143	-	-	-	-	-	-	-	-
PAFIPGJD_00219	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	Sulfatase
PAFIPGJD_00222	6.79e-100	-	-	-	S	ko:K07107	-	ko00000,ko01000	Thioesterase-like superfamily
PAFIPGJD_00223	2.51e-182	-	-	-	S	-	-	-	competence protein
PAFIPGJD_00224	2.92e-70	-	-	-	-	-	-	-	-
PAFIPGJD_00225	1.97e-189	-	3.6.1.66	-	S	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	MazG nucleotide pyrophosphohydrolase domain
PAFIPGJD_00226	3.03e-74	-	-	-	-	-	-	-	-
PAFIPGJD_00227	2.24e-264	-	3.1.13.5	-	J	ko:K03684	-	ko00000,ko01000,ko03016	3'-5' exonuclease
PAFIPGJD_00228	1.94e-140	-	-	-	S	ko:K07164	-	ko00000	C4-type zinc ribbon domain
PAFIPGJD_00229	2.22e-298	lpxK	2.7.1.130	-	M	ko:K00912	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
PAFIPGJD_00230	0.0	-	-	-	S	ko:K07263	-	ko00000,ko01000,ko01002	Insulinase (Peptidase family M16)
PAFIPGJD_00231	2.13e-118	-	-	-	-	-	-	-	-
PAFIPGJD_00232	1.99e-233	-	-	-	S	ko:K07192	ko04910,map04910	ko00000,ko00001,ko03036,ko04131,ko04147	prohibitin homologues
PAFIPGJD_00233	0.000103	-	-	-	S	-	-	-	Entericidin EcnA/B family
PAFIPGJD_00235	6.18e-205	-	1.4.1.16	-	S	ko:K03340	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
PAFIPGJD_00236	8.36e-174	-	-	-	S	-	-	-	peptidoglycan biosynthetic process
PAFIPGJD_00237	5.39e-136	-	-	-	F	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
PAFIPGJD_00238	3.21e-125	-	-	-	EGP	-	-	-	Major facilitator Superfamily
PAFIPGJD_00239	0.0	-	-	-	KT	-	-	-	Sigma factor PP2C-like phosphatases
PAFIPGJD_00240	6.91e-165	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70 region 2
PAFIPGJD_00241	3.33e-242	-	-	-	S	-	-	-	Endonuclease/Exonuclease/phosphatase family
PAFIPGJD_00243	2.01e-157	-	-	-	NU	ko:K02457,ko:K08084	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	protein transport across the cell outer membrane
PAFIPGJD_00244	1.83e-188	-	-	-	-	-	-	-	-
PAFIPGJD_00245	5.15e-247	-	-	-	NU	-	-	-	Prokaryotic N-terminal methylation motif
PAFIPGJD_00246	3.43e-183	-	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Biotin/lipoate A/B protein ligase family
PAFIPGJD_00247	4.06e-244	-	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo/keto reductase family
PAFIPGJD_00248	0.0	hppA	3.6.1.1	-	C	ko:K15987	ko00190,map00190	ko00000,ko00001,ko01000	Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane
PAFIPGJD_00252	0.0	-	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Anthranilate synthase component I, N terminal region
PAFIPGJD_00253	4.36e-208	trpD	2.4.2.18, 4.1.3.27	-	E	ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PAFIPGJD_00254	8.64e-128	trpD	2.4.2.18, 4.1.3.27	-	E	ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PAFIPGJD_00255	3.22e-137	-	4.1.1.48	-	E	ko:K01609	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Indole-3-glycerol phosphate synthase
PAFIPGJD_00256	1.7e-154	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PAFIPGJD_00257	2.54e-287	-	4.2.1.20	-	E	ko:K01696	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PAFIPGJD_00258	1.29e-186	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PAFIPGJD_00268	2.25e-91	-	-	-	O	-	-	-	response to oxidative stress
PAFIPGJD_00269	1.6e-293	-	2.3.1.31	-	E	ko:K00641	ko00270,ko01100,ko01130,map00270,map01100,map01130	ko00000,ko00001,ko01000	alpha/beta hydrolase fold
PAFIPGJD_00270	1.08e-63	-	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L36
PAFIPGJD_00271	0.0	-	2.3.1.241	-	M	ko:K02517	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Glycosyltransferase family 9 (heptosyltransferase)
PAFIPGJD_00272	1.06e-188	-	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	4Fe-4S single cluster domain
PAFIPGJD_00273	0.0	-	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
PAFIPGJD_00274	1.15e-188	-	-	-	E	-	-	-	PFAM lipolytic protein G-D-S-L family
PAFIPGJD_00275	4.49e-187	-	-	-	E	-	-	-	PFAM lipolytic protein G-D-S-L family
PAFIPGJD_00276	0.0	-	-	-	EG	-	-	-	BNR repeat-like domain
PAFIPGJD_00277	0.0	legA	3.5.1.2	-	G	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	response to abiotic stimulus
PAFIPGJD_00278	1.32e-195	supH	-	-	Q	-	-	-	phosphatase activity
PAFIPGJD_00280	5.49e-85	nuoA	1.6.5.3	-	C	ko:K00330	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAFIPGJD_00281	7.13e-276	-	-	-	G	-	-	-	Major Facilitator Superfamily
PAFIPGJD_00285	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAFIPGJD_00286	2.91e-38	-	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L35
PAFIPGJD_00287	5.25e-79	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAFIPGJD_00293	1.79e-77	-	-	-	M	-	-	-	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PAFIPGJD_00294	6.05e-222	-	-	-	L	-	-	-	Transposase zinc-ribbon domain
PAFIPGJD_00295	0.0	-	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	Peptidase family M50
PAFIPGJD_00299	0.0	-	-	-	L	-	-	-	UvrD/REP helicase N-terminal domain
PAFIPGJD_00300	0.0	-	-	-	L	-	-	-	PD-(D/E)XK nuclease superfamily
PAFIPGJD_00301	3.07e-211	MA20_36650	-	-	EG	-	-	-	spore germination
PAFIPGJD_00302	3.57e-190	dpnC	3.1.21.4	-	L	ko:K01155	-	ko00000,ko01000,ko02048	Dam-replacing family
PAFIPGJD_00303	0.0	-	-	-	S	-	-	-	Alpha-2-macroglobulin family
PAFIPGJD_00304	1.94e-289	-	-	-	C	-	-	-	Iron-containing alcohol dehydrogenase
PAFIPGJD_00306	2.89e-123	-	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
PAFIPGJD_00309	1.79e-213	-	-	-	-	-	-	-	-
PAFIPGJD_00310	3.97e-152	-	-	-	O	-	-	-	Glycoprotease family
PAFIPGJD_00311	4.28e-274	-	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Citrate synthase, C-terminal domain
PAFIPGJD_00313	3.86e-112	-	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PAFIPGJD_00314	4.12e-139	-	-	-	L	-	-	-	RNase_H superfamily
PAFIPGJD_00315	1.92e-102	smpB	-	-	O	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAFIPGJD_00316	4.3e-44	-	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	RNA polymerase activity
PAFIPGJD_00317	1.34e-135	-	5.4.99.20	-	J	ko:K06181	-	ko00000,ko01000,ko03009	RNA pseudouridylate synthase
PAFIPGJD_00318	2.16e-188	-	-	-	-	-	-	-	-
PAFIPGJD_00319	1.3e-104	-	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	NDK
PAFIPGJD_00320	1.71e-201	-	-	-	S	-	-	-	Glycosyltransferase like family 2
PAFIPGJD_00321	4.12e-225	-	-	-	M	-	-	-	Glycosyl transferase family 2
PAFIPGJD_00323	7.26e-285	-	-	-	NU	ko:K02653	-	ko00000,ko02035,ko02044	Type II secretion system (T2SS), protein F
PAFIPGJD_00324	0.0	-	-	-	NU	ko:K02652	-	ko00000,ko02035,ko02044	Type II secretion system (T2SS), protein E, N-terminal domain
PAFIPGJD_00325	0.0	-	-	-	NU	ko:K02652	-	ko00000,ko02035,ko02044	Type II/IV secretion system protein
PAFIPGJD_00326	4.22e-244	-	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAFIPGJD_00327	2.83e-110	-	-	-	S	-	-	-	Control of competence regulator ComK, YlbF/YmcA
PAFIPGJD_00328	3.86e-281	-	2.6.1.1	-	E	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	DegT/DnrJ/EryC1/StrS aminotransferase family
PAFIPGJD_00329	0.0	murJ	-	-	S	ko:K03980	-	ko00000,ko01011,ko02000	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
PAFIPGJD_00330	1.21e-269	-	-	-	IM	-	-	-	Cytidylyltransferase-like
PAFIPGJD_00331	2.89e-156	-	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Iron/manganese superoxide dismutases, alpha-hairpin domain
PAFIPGJD_00332	0.0	-	-	-	S	-	-	-	Glycosyl hydrolase-like 10
PAFIPGJD_00333	4.2e-171	-	-	-	S	ko:K06898	-	ko00000	AIR carboxylase
PAFIPGJD_00334	1.39e-190	-	-	-	L	ko:K06864	-	ko00000	tRNA processing
PAFIPGJD_00335	3.77e-288	larC	4.99.1.12	-	S	ko:K09121	-	ko00000,ko01000	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PAFIPGJD_00336	1.07e-238	-	2.5.1.90	-	H	ko:K02523	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Polyprenyl synthetase
PAFIPGJD_00337	0.0	-	-	-	E	ko:K03305	-	ko00000	POT family
PAFIPGJD_00338	0.0	-	5.2.1.8	-	O	ko:K03770	-	ko00000,ko01000,ko03110	PPIC-type PPIASE domain
PAFIPGJD_00339	2.39e-126	-	-	-	S	-	-	-	Pfam:DUF59
PAFIPGJD_00340	7.43e-107	-	-	-	-	-	-	-	-
PAFIPGJD_00341	8.93e-219	-	-	-	E	-	-	-	Domain of unknown function (DUF3472)
PAFIPGJD_00342	9.04e-317	nuoN	1.6.5.3	-	C	ko:K00343	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAFIPGJD_00343	0.0	-	1.6.5.3	-	C	ko:K00342	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Proton-conducting membrane transporter
PAFIPGJD_00344	0.0	-	1.6.5.3	-	CP	ko:K00341	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
PAFIPGJD_00345	6.01e-61	nuoK	1.6.5.3	-	C	ko:K00340	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAFIPGJD_00346	4.41e-156	-	1.6.5.3	-	C	ko:K00339	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
PAFIPGJD_00347	1.8e-124	nuoI	1.6.5.3	-	C	ko:K00338	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAFIPGJD_00348	1.04e-309	nuoH	1.6.5.3	-	C	ko:K00337	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
PAFIPGJD_00349	0.0	-	1.6.5.3	-	C	ko:K00336	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
PAFIPGJD_00350	0.0	-	1.6.5.3	-	C	ko:K00335	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PAFIPGJD_00351	2.88e-142	-	1.6.5.3	-	C	ko:K00334	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Thioredoxin-like [2Fe-2S] ferredoxin
PAFIPGJD_00352	1.3e-303	nuoD	1.6.5.3	-	C	ko:K00333	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAFIPGJD_00354	0.0	-	-	-	G	-	-	-	Polysaccharide deacetylase
PAFIPGJD_00355	0.0	-	-	-	P	-	-	-	Putative Na+/H+ antiporter
PAFIPGJD_00356	1.07e-141	-	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Lumazine binding domain
PAFIPGJD_00357	7.24e-205	-	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase (PrmA)
PAFIPGJD_00358	0.0	pmp21	-	-	T	-	-	-	pathogenesis
PAFIPGJD_00359	0.0	-	2.4.1.25	GH77	G	ko:K00705	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	4-alpha-glucanotransferase
PAFIPGJD_00361	0.0	-	2.8.4.4	-	J	ko:K14441	-	ko00000,ko01000,ko03009	Uncharacterized protein family UPF0004
PAFIPGJD_00362	0.0	-	-	-	-	ko:K07403	-	ko00000	-
PAFIPGJD_00363	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAFIPGJD_00364	0.0	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PAFIPGJD_00365	3.72e-187	-	3.4.13.22	-	M	ko:K08641	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	D-ala-D-ala dipeptidase
PAFIPGJD_00368	0.0	-	-	-	E	-	-	-	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAFIPGJD_00369	0.0	-	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	tail specific protease
PAFIPGJD_00371	3.14e-213	-	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Cytidylyltransferase family
PAFIPGJD_00372	0.0	-	3.6.4.13	-	L	ko:K03579	-	ko00000,ko01000	ATP-dependent helicase C-terminal
PAFIPGJD_00373	5.58e-218	-	3.6.4.13	-	L	ko:K03579	-	ko00000,ko01000	ATP-dependent helicase C-terminal
PAFIPGJD_00374	0.0	-	-	-	P	ko:K03306	-	ko00000	phosphate transporter
PAFIPGJD_00375	3.39e-311	-	-	-	O	-	-	-	peroxiredoxin activity
PAFIPGJD_00376	0.0	-	2.7.7.19	-	J	ko:K00970	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Poly A polymerase head domain
PAFIPGJD_00377	0.0	-	-	-	G	-	-	-	Alpha amylase, catalytic domain
PAFIPGJD_00378	0.0	-	-	-	NU	ko:K02453	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	Bacterial type II and III secretion system protein
PAFIPGJD_00379	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_00380	7.21e-183	-	-	-	S	ko:K09778	-	ko00000	Domain of unknown function (DUF374)
PAFIPGJD_00381	7.21e-203	folD	1.5.1.5, 3.5.4.9	-	H	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAFIPGJD_00382	2.91e-182	-	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
PAFIPGJD_00383	2.62e-202	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PAFIPGJD_00384	4.88e-284	-	-	-	E	-	-	-	Transglutaminase-like superfamily
PAFIPGJD_00385	8.69e-261	-	-	-	J	ko:K05541	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAFIPGJD_00386	1.31e-289	-	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	LytB protein
PAFIPGJD_00388	2.34e-43	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S20
PAFIPGJD_00389	3.88e-140	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PAFIPGJD_00390	0.0	-	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, central domain
PAFIPGJD_00391	1.27e-220	-	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Phosphatidylserine decarboxylase
PAFIPGJD_00392	1.1e-151	-	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribulose-phosphate 3 epimerase family
PAFIPGJD_00393	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Leucyl-tRNA synthetase, Domain 2
PAFIPGJD_00394	0.0	-	-	-	P	-	-	-	Sulfatase
PAFIPGJD_00396	1.02e-243	-	4.1.1.96	-	E	ko:K13747	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
PAFIPGJD_00397	9.4e-23	-	4.1.1.96	-	E	ko:K13747	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
PAFIPGJD_00398	0.0	-	4.1.1.19	-	E	ko:K01585	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
PAFIPGJD_00399	6.72e-268	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAFIPGJD_00400	1.5e-161	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PAFIPGJD_00401	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Beta galactosidase small chain
PAFIPGJD_00402	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase activity
PAFIPGJD_00403	0.0	rarA	-	-	L	ko:K07478	-	ko00000	MgsA AAA+ ATPase C terminal
PAFIPGJD_00404	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	PFAM Glycoside hydrolase, family 20, catalytic core
PAFIPGJD_00406	3.87e-301	-	2.7.1.11, 2.7.1.90	-	H	ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
PAFIPGJD_00407	8.21e-215	-	-	-	M	-	-	-	Carbohydrate esterase, sialic acid-specific acetylesterase
PAFIPGJD_00408	3.61e-268	-	-	-	K	-	-	-	Periplasmic binding protein-like domain
PAFIPGJD_00412	8.79e-263	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAFIPGJD_00413	0.0	-	3.1.21.4	-	L	ko:K01155	-	ko00000,ko01000,ko02048	Type III restriction enzyme res subunit
PAFIPGJD_00414	0.0	-	-	-	L	-	-	-	Type III restriction enzyme res subunit
PAFIPGJD_00415	1.82e-126	cobU	2.7.1.156, 2.7.7.62, 6.3.5.10	-	H	ko:K02231,ko:K02232	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	cobinamide kinase activity
PAFIPGJD_00416	6.74e-207	-	-	-	G	-	-	-	myo-inosose-2 dehydratase activity
PAFIPGJD_00417	6.59e-172	cobS	2.7.8.26	-	H	ko:K02233	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
PAFIPGJD_00418	4.02e-239	cobT	2.4.2.21	-	H	ko:K00768	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
PAFIPGJD_00419	9.28e-227	cobD	6.3.1.10	-	H	ko:K02227	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
PAFIPGJD_00420	0.0	cobQ	-	-	H	-	-	-	Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
PAFIPGJD_00422	0.0	-	-	-	H	ko:K02014	-	ko00000,ko02000	TonB dependent receptor
PAFIPGJD_00424	0.0	-	-	-	E	ko:K13893	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PAFIPGJD_00425	0.0	-	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Glycosyl hydrolases family 35
PAFIPGJD_00426	3.85e-159	-	-	-	M	ko:K16079	-	ko00000,ko02000	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PAFIPGJD_00427	1.9e-312	-	3.5.4.28, 3.5.4.31	-	F	ko:K12960	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
PAFIPGJD_00428	0.0	-	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PAFIPGJD_00429	5.53e-96	-	-	-	S	-	-	-	Nucleotidyltransferase substrate binding protein like
PAFIPGJD_00430	8.04e-60	-	3.4.11.5	-	S	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	nucleotidyltransferase activity
PAFIPGJD_00431	1.47e-229	-	2.3.1.61	-	C	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
PAFIPGJD_00432	0.0	-	1.2.4.2	-	C	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoglutarate dehydrogenase C-terminal
PAFIPGJD_00433	1.48e-245	-	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome bd terminal oxidase subunit II
PAFIPGJD_00434	8.84e-145	-	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome bd terminal oxidase subunit I
PAFIPGJD_00435	2.7e-113	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
PAFIPGJD_00436	1.22e-45	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Low molecular weight phosphatase family
PAFIPGJD_00437	1.6e-19	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Low molecular weight phosphatase family
PAFIPGJD_00438	0.0	-	-	-	T	-	-	-	Chase2 domain
PAFIPGJD_00439	9.8e-232	-	2.7.1.221	-	S	ko:K07102	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Phosphotransferase enzyme family
PAFIPGJD_00440	1.25e-307	-	4.2.1.20	-	E	ko:K06001	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PAFIPGJD_00441	4.98e-92	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAFIPGJD_00443	3.01e-113	-	1.16.3.2	-	P	ko:K02217	-	ko00000,ko01000	Ferritin-like domain
PAFIPGJD_00444	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_00445	3.15e-103	-	-	-	J	-	-	-	YjgF/chorismate_mutase-like, putative endoribonuclease
PAFIPGJD_00447	7.16e-115	-	-	-	S	ko:K03748	-	ko00000	DUF218 domain
PAFIPGJD_00449	2.29e-229	-	-	-	S	-	-	-	mannose-ethanolamine phosphotransferase activity
PAFIPGJD_00453	0.0	-	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	RQC
PAFIPGJD_00455	3.73e-176	-	-	-	-	-	-	-	-
PAFIPGJD_00456	3.89e-209	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PAFIPGJD_00457	2.18e-269	sucC	6.2.1.5	-	C	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PAFIPGJD_00458	6.3e-291	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PAFIPGJD_00459	2.23e-205	-	-	-	S	ko:K03453	-	ko00000	Bile acid
PAFIPGJD_00462	6.39e-71	-	-	-	-	-	-	-	-
PAFIPGJD_00463	0.0	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAFIPGJD_00464	0.0	-	2.3.1.40, 6.2.1.20	-	IQ	ko:K05939	ko00071,ko00564,map00071,map00564	ko00000,ko00001,ko01000	AMP-binding enzyme
PAFIPGJD_00465	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAFIPGJD_00467	3.69e-64	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAFIPGJD_00468	9.92e-110	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAFIPGJD_00469	1.74e-156	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAFIPGJD_00470	2.58e-93	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAFIPGJD_00471	6.29e-135	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
PAFIPGJD_00472	3.61e-46	-	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	SecE/Sec61-gamma subunits of protein translocation complex
PAFIPGJD_00474	9.94e-287	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAFIPGJD_00476	3.39e-254	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAFIPGJD_00477	0.0	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAFIPGJD_00478	2.5e-153	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAFIPGJD_00479	8.38e-282	tig	-	-	O	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PAFIPGJD_00480	0.0	-	-	-	M	ko:K07277	-	ko00000,ko02000,ko03029	Surface antigen
PAFIPGJD_00481	4.84e-155	-	1.14.11.27	-	P	ko:K10277	-	ko00000,ko01000,ko03036	peptidyl-arginine hydroxylation
PAFIPGJD_00482	2.6e-231	-	1.5.1.20	-	E	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
PAFIPGJD_00483	2.38e-169	-	-	-	CO	-	-	-	Protein conserved in bacteria
PAFIPGJD_00485	3.44e-146	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAFIPGJD_00486	0.0	-	-	-	P	ko:K07239	-	ko00000	AcrB/AcrD/AcrF family
PAFIPGJD_00487	1.96e-297	czcB	-	-	M	ko:K15727	-	ko00000,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAFIPGJD_00488	1.01e-293	-	-	-	MU	ko:K15725	-	ko00000,ko02000	efflux transmembrane transporter activity
PAFIPGJD_00490	3.17e-206	-	-	-	G	ko:K06867,ko:K07001	-	ko00000	response to abiotic stimulus
PAFIPGJD_00491	0.0	-	-	-	E	-	-	-	PFAM major facilitator superfamily MFS_1
PAFIPGJD_00494	3.9e-214	-	-	-	KQ	-	-	-	Hypothetical methyltransferase
PAFIPGJD_00495	3.77e-291	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAFIPGJD_00496	0.0	ahcY	3.3.1.1	-	H	ko:K01251	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
PAFIPGJD_00497	3.5e-249	rgpB	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PAFIPGJD_00498	8.88e-247	-	-	-	-	-	-	-	-
PAFIPGJD_00499	1.97e-316	-	-	-	H	-	-	-	Flavin containing amine oxidoreductase
PAFIPGJD_00500	8.66e-227	-	-	-	-	-	-	-	-
PAFIPGJD_00501	0.0	-	-	-	P	-	-	-	Domain of unknown function (DUF4976)
PAFIPGJD_00502	0.0	-	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	RecQ zinc-binding
PAFIPGJD_00504	8.72e-301	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAFIPGJD_00505	9.76e-258	-	-	-	S	-	-	-	Glycoside-hydrolase family GH114
PAFIPGJD_00506	0.0	-	1.4.3.16	-	H	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Fumarate reductase flavoprotein C-term
PAFIPGJD_00507	2.86e-133	-	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	SpoU rRNA Methylase family
PAFIPGJD_00508	4.56e-206	-	3.1.1.53	-	L	ko:K03547,ko:K05970	-	ko00000,ko01000,ko03400	3'-5' exonuclease activity
PAFIPGJD_00509	4.92e-90	-	-	-	K	-	-	-	Helix-turn-helix diphteria tox regulatory element
PAFIPGJD_00510	0.0	-	-	-	P	-	-	-	E1-E2 ATPase
PAFIPGJD_00513	2.83e-303	-	-	-	M	ko:K07267	-	ko00000,ko02000	wide pore channel activity
PAFIPGJD_00516	0.0	-	-	-	P	ko:K04759	-	ko00000,ko02000	Ferrous iron transport protein B C terminus
PAFIPGJD_00517	4.02e-48	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	iron ion homeostasis
PAFIPGJD_00518	2.48e-40	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	iron ion homeostasis
PAFIPGJD_00519	0.0	-	1.11.1.5	-	P	ko:K00428	-	ko00000,ko01000	Di-haem cytochrome c peroxidase
PAFIPGJD_00520	5.44e-229	lipA	2.8.1.8	-	H	ko:K03644	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PAFIPGJD_00521	1.1e-131	tadA	3.5.4.33	-	FJ	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAFIPGJD_00522	1.65e-240	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PAFIPGJD_00523	0.0	-	-	-	P	-	-	-	E1-E2 ATPase
PAFIPGJD_00524	0.0	-	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PAFIPGJD_00525	1.85e-142	coaE	2.7.1.24	-	H	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAFIPGJD_00526	0.0	-	-	-	NU	ko:K02453	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	Bacterial type II and III secretion system protein
PAFIPGJD_00527	2.27e-245	-	-	-	-	-	-	-	-
PAFIPGJD_00528	6.11e-208	-	-	-	-	-	-	-	-
PAFIPGJD_00529	0.0	-	-	-	NU	-	-	-	Type IV pilus assembly protein PilM;
PAFIPGJD_00530	2.8e-169	-	-	-	-	-	-	-	-
PAFIPGJD_00531	9.39e-256	-	-	-	G	-	-	-	M42 glutamyl aminopeptidase
PAFIPGJD_00532	2.93e-260	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAFIPGJD_00533	5.68e-155	-	-	-	S	-	-	-	Protein of unknown function (DUF3313)
PAFIPGJD_00534	2.04e-314	-	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	Aminopeptidase P, N-terminal domain
PAFIPGJD_00535	1.11e-206	hisG	2.4.2.17	-	E	ko:K00765	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	ATP phosphoribosyltransferase
PAFIPGJD_00536	2.09e-10	-	-	-	S	-	-	-	Mitochondrial domain of unknown function (DUF1713)
PAFIPGJD_00537	5.8e-289	-	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
PAFIPGJD_00538	6.89e-168	-	-	-	T	ko:K07657	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
PAFIPGJD_00539	0.0	-	4.2.1.9	-	EG	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Dehydratase family
PAFIPGJD_00540	0.0	-	-	-	T	-	-	-	pathogenesis
PAFIPGJD_00541	4.71e-267	xerD1	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
PAFIPGJD_00542	6.59e-205	-	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil DNA glycosylase superfamily
PAFIPGJD_00543	6.68e-286	-	4.1.99.19	-	H	ko:K03150	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Biotin and Thiamin Synthesis associated domain
PAFIPGJD_00544	0.0	-	-	-	M	-	-	-	Sulfatase
PAFIPGJD_00545	3.09e-290	-	-	-	-	-	-	-	-
PAFIPGJD_00546	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
PAFIPGJD_00547	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF2851)
PAFIPGJD_00548	6.39e-119	-	-	-	T	-	-	-	STAS domain
PAFIPGJD_00549	0.0	-	-	-	I	-	-	-	Prenyltransferase and squalene oxidase repeat
PAFIPGJD_00550	1.26e-247	-	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	NmrA-like family
PAFIPGJD_00551	0.0	-	2.1.1.182	-	IJ	ko:K02528	-	ko00000,ko01000,ko03009	Ribosomal RNA adenine dimethylases
PAFIPGJD_00552	7.2e-103	-	-	-	-	-	-	-	-
PAFIPGJD_00553	9.86e-54	-	-	-	-	-	-	-	-
PAFIPGJD_00554	1.83e-120	-	-	-	-	-	-	-	-
PAFIPGJD_00555	2.48e-300	-	-	-	V	ko:K03327	-	ko00000,ko02000	drug transmembrane transporter activity
PAFIPGJD_00556	0.0	-	-	-	P	-	-	-	Cation transport protein
PAFIPGJD_00563	1.19e-47	-	-	-	S	-	-	-	Domain of unknown function (DUF932)
PAFIPGJD_00564	3.62e-108	-	-	-	S	-	-	-	Meiotically up-regulated gene 113
PAFIPGJD_00565	9.77e-293	-	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	COG COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
PAFIPGJD_00566	2.43e-101	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PAFIPGJD_00567	3.15e-200	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PAFIPGJD_00568	5.53e-96	-	-	-	L	-	-	-	PD-(D/E)XK nuclease superfamily
PAFIPGJD_00569	4.43e-39	-	-	-	-	-	-	-	-
PAFIPGJD_00572	9.42e-07	-	-	-	S	-	-	-	TM2 domain
PAFIPGJD_00576	5.3e-07	RIPK1	2.7.11.1	-	T	ko:K02861	ko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko05160,ko05169,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map05160,map05169	ko00000,ko00001,ko01000,ko01001	Receptor (TNFRSF)-interacting serine-threonine kinase 1
PAFIPGJD_00577	1.63e-121	-	-	-	S	-	-	-	Virulence protein RhuM family
PAFIPGJD_00578	8.51e-46	-	-	-	S	-	-	-	von Willebrand factor type A domain
PAFIPGJD_00579	4.74e-07	-	-	-	KLT	-	-	-	Lanthionine synthetase C-like protein
PAFIPGJD_00580	3.45e-31	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
PAFIPGJD_00581	2.94e-31	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PAFIPGJD_00584	4.6e-149	-	-	-	M	ko:K17733	-	ko00000,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PAFIPGJD_00590	1.3e-265	-	-	GT4	M	ko:K16703	-	ko00000,ko01000,ko01003	transferase activity, transferring glycosyl groups
PAFIPGJD_00592	0.0	-	-	-	M	-	-	-	pathogenesis
PAFIPGJD_00593	5.97e-62	-	-	-	M	-	-	-	pathogenesis
PAFIPGJD_00598	0.0	-	-	-	M	-	-	-	Peptidase M60-like family
PAFIPGJD_00599	1.8e-215	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PAFIPGJD_00600	3.2e-305	-	-	-	M	-	-	-	OmpA family
PAFIPGJD_00601	1.21e-268	-	-	-	E	-	-	-	serine-type peptidase activity
PAFIPGJD_00602	3.06e-286	-	-	-	S	ko:K11720	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Predicted permease YjgP/YjgQ family
PAFIPGJD_00603	1.63e-169	-	-	-	S	-	-	-	HAD-hyrolase-like
PAFIPGJD_00605	1.54e-217	-	2.3.1.39	-	I	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Acyl transferase domain
PAFIPGJD_00606	4.19e-87	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PAFIPGJD_00607	2.95e-262	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAFIPGJD_00608	2.38e-258	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Possible lysine decarboxylase
PAFIPGJD_00609	3.81e-277	-	3.4.23.43	-	NOU	ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	Type IV leader peptidase family
PAFIPGJD_00611	0.0	secD	-	-	U	ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PAFIPGJD_00612	1.96e-226	-	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
PAFIPGJD_00613	9.03e-173	-	-	-	T	-	-	-	Outer membrane lipoprotein-sorting protein
PAFIPGJD_00614	3.17e-166	-	-	-	S	ko:K05810	-	ko00000,ko01000	Multi-copper polyphenol oxidoreductase laccase
PAFIPGJD_00615	1.12e-217	-	-	-	-	-	-	-	-
PAFIPGJD_00617	5.46e-170	-	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Type I 3-dehydroquinase
PAFIPGJD_00618	3.1e-217	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
PAFIPGJD_00621	0.0	-	-	-	P	-	-	-	Citrate transporter
PAFIPGJD_00622	4.39e-145	-	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
PAFIPGJD_00623	4.1e-193	-	-	-	S	-	-	-	Domain of unknown function (DUF1732)
PAFIPGJD_00624	0.0	-	2.6.1.66	-	E	ko:K00835	ko00290,ko01100,ko01110,ko01130,map00290,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko01007	Aminotransferase class I and II
PAFIPGJD_00627	2.92e-233	-	-	-	CO	-	-	-	Protein of unknown function, DUF255
PAFIPGJD_00628	6.18e-173	zupT	-	-	P	ko:K07238	-	ko00000,ko02000	transporter
PAFIPGJD_00629	2.58e-256	-	-	-	L	-	-	-	Membrane
PAFIPGJD_00630	2.21e-254	-	2.7.1.11, 2.7.1.90	-	G	ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Phosphofructokinase
PAFIPGJD_00631	3.37e-224	-	-	-	M	-	-	-	D-alanyl-D-alanine carboxypeptidase
PAFIPGJD_00634	2.97e-210	-	1.1.1.262	-	H	ko:K00097	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Pyridoxal phosphate biosynthetic protein PdxA
PAFIPGJD_00635	1.56e-60	-	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Ribosomal protein S6
PAFIPGJD_00636	1.31e-147	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PAFIPGJD_00637	1.48e-141	hisB	4.2.1.19	-	E	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Imidazoleglycerol-phosphate dehydratase
PAFIPGJD_00639	5.05e-131	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PAFIPGJD_00640	4.58e-220	prs	2.7.6.1	-	EF	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAFIPGJD_00641	1.19e-229	-	-	-	C	-	-	-	Transmembrane exosortase (Exosortase_EpsH)
PAFIPGJD_00642	1.06e-174	-	-	-	S	-	-	-	Protein of unknown function (DUF3485)
PAFIPGJD_00643	5.95e-167	pks6	-	-	Q	-	-	-	amino acid activation for nonribosomal peptide biosynthetic process
PAFIPGJD_00644	6.29e-151	-	-	-	-	-	-	-	-
PAFIPGJD_00645	0.0	-	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
PAFIPGJD_00646	0.0	-	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Peptidase S24-like
PAFIPGJD_00647	2.91e-228	-	2.5.1.32, 2.5.1.99	-	I	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Squalene/phytoene synthase
PAFIPGJD_00648	0.0	-	-	-	M	-	-	-	Parallel beta-helix repeats
PAFIPGJD_00649	2.96e-242	-	3.1.3.18	-	F	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD-hyrolase-like
PAFIPGJD_00650	4.47e-174	-	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PAFIPGJD_00651	9.85e-262	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAFIPGJD_00652	1.72e-116	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAFIPGJD_00653	3.65e-60	-	-	-	S	ko:K09131	-	ko00000	DUF167
PAFIPGJD_00654	4.5e-176	-	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidine biosynthesis protein
PAFIPGJD_00656	7.06e-249	-	-	-	-	-	-	-	-
PAFIPGJD_00658	4e-147	-	-	-	M	-	-	-	Polymer-forming cytoskeletal
PAFIPGJD_00659	0.0	-	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	ATPases associated with a variety of cellular activities
PAFIPGJD_00661	7.7e-31	-	-	-	S	ko:K07126	-	ko00000	Sel1-like repeats.
PAFIPGJD_00662	2.43e-69	-	-	-	S	-	-	-	Putative zinc- or iron-chelating domain
PAFIPGJD_00663	3.21e-306	argJ	2.3.1.1, 2.3.1.35	-	E	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PAFIPGJD_00664	2.9e-253	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Semialdehyde dehydrogenase, NAD binding domain
PAFIPGJD_00666	0.0	-	-	-	ET	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PAFIPGJD_00667	8.78e-167	-	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PAFIPGJD_00668	4.37e-124	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	adenylate kinase activity
PAFIPGJD_00669	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAFIPGJD_00670	3.05e-169	-	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	RNA pseudouridylate synthase
PAFIPGJD_00671	2.51e-191	-	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	RNA pseudouridylate synthase
PAFIPGJD_00672	2.94e-155	-	1.5.1.34	-	C	ko:K10679	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	Nitroreductase family
PAFIPGJD_00673	0.0	-	-	-	M	ko:K04744	-	ko00000,ko02000	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
PAFIPGJD_00674	0.0	-	-	-	M	-	-	-	NPCBM/NEW2 domain
PAFIPGJD_00675	0.0	-	-	-	G	-	-	-	Glycogen debranching enzyme
PAFIPGJD_00676	1.83e-231	-	1.1.1.37	-	C	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible oxidation of malate to oxaloacetate
PAFIPGJD_00677	0.0	-	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	UDP binding domain
PAFIPGJD_00681	1.33e-100	-	-	-	MP	-	-	-	regulation of cell-substrate adhesion
PAFIPGJD_00685	2.59e-75	-	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PAFIPGJD_00686	1.16e-241	tilS	6.3.4.19	-	D	ko:K04075	-	ko00000,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAFIPGJD_00687	1.4e-259	-	2.3.1.8	-	C	ko:K00625	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Phosphate acetyl/butaryl transferase
PAFIPGJD_00688	5.56e-214	-	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	PHP domain
PAFIPGJD_00690	3e-254	-	-	-	S	-	-	-	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
PAFIPGJD_00691	0.0	-	-	-	G	-	-	-	Major Facilitator Superfamily
PAFIPGJD_00692	2.29e-296	-	-	-	-	-	-	-	-
PAFIPGJD_00693	0.0	-	-	-	L	-	-	-	TRCF
PAFIPGJD_00694	0.0	-	-	-	S	ko:K07126	-	ko00000	beta-lactamase activity
PAFIPGJD_00695	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	myo-inosose-2 dehydratase activity
PAFIPGJD_00696	3.67e-236	-	-	-	-	-	-	-	-
PAFIPGJD_00697	3.33e-285	pgk	2.7.2.3	-	G	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Phosphoglycerate kinase
PAFIPGJD_00698	1.67e-249	-	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PAFIPGJD_00699	4.46e-148	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAFIPGJD_00701	9.65e-133	-	-	-	M	-	-	-	Polysaccharide biosynthesis/export protein
PAFIPGJD_00702	0.0	-	-	-	D	-	-	-	Chain length determinant protein
PAFIPGJD_00703	8.04e-298	-	-	-	-	-	-	-	-
PAFIPGJD_00707	0.0	-	-	-	P	ko:K03306	-	ko00000	phosphate transporter
PAFIPGJD_00708	5.31e-99	-	-	-	S	-	-	-	peptidase
PAFIPGJD_00709	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAFIPGJD_00710	2.2e-61	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAFIPGJD_00711	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	MreB/Mbl protein
PAFIPGJD_00712	0.0	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PAFIPGJD_00713	1.14e-279	-	-	-	S	-	-	-	COG0790 FOG TPR repeat, SEL1 subfamily
PAFIPGJD_00714	5.1e-241	-	-	-	O	ko:K04655	-	ko00000	AIR synthase related protein, N-terminal domain
PAFIPGJD_00715	1.11e-261	-	-	-	O	ko:K04654	-	ko00000	Hydrogenase formation hypA family
PAFIPGJD_00716	2.74e-50	-	-	-	O	ko:K04653	-	ko00000	HupF/HypC family
PAFIPGJD_00717	0.0	-	-	-	O	ko:K04656	-	ko00000	HypF finger
PAFIPGJD_00718	1.44e-175	hypB	-	-	KO	ko:K04652	-	ko00000,ko03110	CobW/HypB/UreG, nucleotide-binding domain
PAFIPGJD_00719	7.37e-311	-	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Histidyl-tRNA synthetase
PAFIPGJD_00720	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PAFIPGJD_00724	6.65e-261	-	2.3.1.47	-	H	ko:K00652	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class I and II
PAFIPGJD_00725	2.33e-281	-	-	-	IQ	-	-	-	Beta-ketoacyl synthase, C-terminal domain
PAFIPGJD_00726	0.0	-	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	thiolester hydrolase activity
PAFIPGJD_00727	3.91e-289	-	-	-	S	-	-	-	Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units
PAFIPGJD_00728	5.44e-147	-	-	-	IQ	-	-	-	RmlD substrate binding domain
PAFIPGJD_00729	0.0	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	GcpE protein
PAFIPGJD_00730	0.0	-	-	-	M	-	-	-	Bacterial membrane protein, YfhO
PAFIPGJD_00731	1.51e-198	-	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PAFIPGJD_00732	4.03e-120	-	-	-	-	-	-	-	-
PAFIPGJD_00741	0.0	-	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
PAFIPGJD_00742	3.36e-130	-	-	-	D	ko:K06287	-	ko00000	Maf-like protein
PAFIPGJD_00743	2.66e-290	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAFIPGJD_00745	0.0	-	-	-	KLT	-	-	-	Protein tyrosine kinase
PAFIPGJD_00746	0.0	-	-	-	GK	-	-	-	carbohydrate kinase activity
PAFIPGJD_00747	4.34e-202	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAFIPGJD_00748	1.21e-209	thiL	2.7.4.16	-	H	ko:K00946	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PAFIPGJD_00749	0.0	-	-	-	I	-	-	-	Acetyltransferase (GNAT) domain
PAFIPGJD_00750	2.3e-142	-	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Cytidylate kinase
PAFIPGJD_00751	8.17e-147	-	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Phosphate acyltransferases
PAFIPGJD_00752	1.57e-259	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAFIPGJD_00753	1.53e-120	actI	1.5.1.36	-	S	ko:K00484	ko00350,ko00740,ko01100,ko01120,ko01220,map00350,map00740,map01100,map01120,map01220	ko00000,ko00001,ko01000	FMN binding
PAFIPGJD_00754	3.86e-162	rnc	3.1.26.3	-	K	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAFIPGJD_00755	0.0	-	-	-	P	ko:K07221	-	ko00000,ko02000	Phosphate-selective porin O and P
PAFIPGJD_00756	2.72e-18	-	-	-	-	-	-	-	-
PAFIPGJD_00757	3.23e-182	-	-	-	S	-	-	-	Endonuclease/Exonuclease/phosphatase family
PAFIPGJD_00758	4.14e-164	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Tetrapyrrole (Corrin/Porphyrin) Methylases
PAFIPGJD_00759	7.51e-116	-	-	-	S	-	-	-	Lipopolysaccharide-assembly
PAFIPGJD_00760	1.18e-170	-	-	-	S	ko:K05807	-	ko00000,ko02000	Outer membrane lipoprotein
PAFIPGJD_00761	2.88e-116	hisI	3.5.4.19	-	E	ko:K01496	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Phosphoribosyl-AMP cyclohydrolase
PAFIPGJD_00762	2.99e-222	-	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III, delta subunit
PAFIPGJD_00763	4.91e-121	-	3.2.2.28	-	L	ko:K03649	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	G/U mismatch-specific uracil-DNA glycosylase activity
PAFIPGJD_00764	6.13e-194	-	-	-	-	-	-	-	-
PAFIPGJD_00765	0.0	carB	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PAFIPGJD_00766	3.15e-137	-	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	Serine/threonine phosphatases, family 2C, catalytic domain
PAFIPGJD_00768	7.18e-182	-	-	-	Q	-	-	-	methyltransferase activity
PAFIPGJD_00769	0.0	-	6.3.5.1	-	H	ko:K01950	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	NAD synthase
PAFIPGJD_00770	2.28e-79	-	-	-	P	ko:K11741	-	ko00000,ko02000	Small Multidrug Resistance protein
PAFIPGJD_00772	0.0	-	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	exo-alpha-(2->6)-sialidase activity
PAFIPGJD_00773	8.38e-276	-	-	-	K	-	-	-	Periplasmic binding protein-like domain
PAFIPGJD_00774	0.0	-	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	BNR/Asp-box repeat
PAFIPGJD_00775	0.0	-	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	transmembrane transport
PAFIPGJD_00781	1.09e-09	-	-	-	K	-	-	-	transcriptional
PAFIPGJD_00785	3.4e-243	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAFIPGJD_00786	9.5e-239	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAFIPGJD_00787	1.83e-282	-	1.8.1.2	-	P	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PAFIPGJD_00788	1.27e-207	MA20_42350	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	Glycosyl transferase, family 2
PAFIPGJD_00789	3.78e-248	-	-	-	M	-	-	-	Glycosyl transferase, family 2
PAFIPGJD_00790	5.94e-235	-	-	-	H	-	-	-	PFAM glycosyl transferase family 8
PAFIPGJD_00792	0.0	-	-	-	S	-	-	-	polysaccharide biosynthetic process
PAFIPGJD_00793	2.21e-264	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PAFIPGJD_00794	6.03e-270	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAFIPGJD_00795	1.77e-142	-	-	-	S	-	-	-	Hexapeptide repeat of succinyl-transferase
PAFIPGJD_00796	4.96e-271	-	-	-	S	ko:K11941	-	ko00000,ko01000	transferase activity, transferring acyl groups other than amino-acyl groups
PAFIPGJD_00797	2.94e-184	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
PAFIPGJD_00798	1.24e-195	miaA	2.5.1.75	-	J	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAFIPGJD_00799	2.72e-263	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAFIPGJD_00800	7.91e-305	mnmE	-	-	J	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PAFIPGJD_00801	6.74e-138	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PAFIPGJD_00802	3.95e-13	-	-	-	S	-	-	-	Mac 1
PAFIPGJD_00803	2.82e-154	-	-	-	S	-	-	-	UPF0126 domain
PAFIPGJD_00804	5.27e-189	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PAFIPGJD_00805	4.54e-105	-	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PAFIPGJD_00806	0.0	rsmH	2.1.1.199	-	M	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAFIPGJD_00808	0.0	-	3.4.16.4	-	M	ko:K03587	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011,ko03036	Penicillin-binding Protein dimerisation domain
PAFIPGJD_00809	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAFIPGJD_00810	2.28e-280	-	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Mur ligase middle domain
PAFIPGJD_00811	8.1e-261	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAFIPGJD_00812	2.48e-315	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAFIPGJD_00813	8.21e-160	mltD	-	CBM50	M	ko:K08307,ko:K12204,ko:K19224	-	ko00000,ko01000,ko01002,ko01011,ko02044	LysM domain
PAFIPGJD_00814	1.33e-277	-	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Cell cycle protein
PAFIPGJD_00815	3.91e-267	-	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAFIPGJD_00816	0.0	murB	-	-	M	-	-	-	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
PAFIPGJD_00817	4.13e-228	ddl	6.3.2.4	-	M	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	D-ala D-ala ligase N-terminus
PAFIPGJD_00818	1.8e-216	-	-	-	M	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	POTRA domain, FtsQ-type
PAFIPGJD_00819	1.15e-238	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAFIPGJD_00820	1.92e-238	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	Ami_3
PAFIPGJD_00821	7.14e-141	-	2.3.1.181	-	H	ko:K03801	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Biotin/lipoate A/B protein ligase family
PAFIPGJD_00822	0.0	-	4.2.1.33, 4.2.1.35	-	E	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Aconitase family (aconitate hydratase)
PAFIPGJD_00823	1.53e-146	-	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Aconitase C-terminal domain
PAFIPGJD_00824	4.99e-274	-	-	-	-	-	-	-	-
PAFIPGJD_00825	0.0	-	-	-	O	-	-	-	Trypsin
PAFIPGJD_00826	0.0	-	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
PAFIPGJD_00827	4.53e-284	-	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	3-dehydroquinate synthase
PAFIPGJD_00828	2.65e-174	-	-	-	E	-	-	-	ATPases associated with a variety of cellular activities
PAFIPGJD_00829	7.15e-199	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAFIPGJD_00830	5.88e-163	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S2
PAFIPGJD_00831	9.04e-171	cbiX	4.99.1.3	-	S	ko:K03795	ko00860,ko01100,ko01120,map00860,map01100,map01120	ko00000,ko00001,ko01000	sirohydrochlorin cobaltochelatase activity
PAFIPGJD_00832	6.68e-198	-	2.5.1.55	-	M	ko:K01627	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	DAHP synthetase I family
PAFIPGJD_00835	6.31e-171	-	-	-	S	ko:K06861	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PAFIPGJD_00836	6.55e-221	-	-	-	E	-	-	-	Phosphoserine phosphatase
PAFIPGJD_00837	0.0	-	6.3.2.45	-	M	ko:K02558	-	ko00000,ko01000	Mur ligase family, catalytic domain
PAFIPGJD_00838	3.11e-306	-	-	-	M	-	-	-	OmpA family
PAFIPGJD_00839	0.0	-	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	UvrD-like helicase C-terminal domain
PAFIPGJD_00840	9.27e-86	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PAFIPGJD_00841	5.33e-114	ywrF	-	-	S	-	-	-	FMN binding
PAFIPGJD_00842	0.0	-	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAFIPGJD_00843	0.0	-	-	-	T	-	-	-	pathogenesis
PAFIPGJD_00844	1.47e-193	-	-	-	I	-	-	-	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PAFIPGJD_00845	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_00846	6.55e-222	-	4.1.3.3	-	EM	ko:K01639	ko00520,map00520	ko00000,ko00001,ko01000	Dihydrodipicolinate synthetase family
PAFIPGJD_00847	6.68e-314	-	5.1.3.8	-	G	ko:K01787	ko00520,map00520	ko00000,ko00001,ko01000	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
PAFIPGJD_00848	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
PAFIPGJD_00849	5.32e-148	-	4.1.3.38	-	E	ko:K02619	ko00790,map00790	ko00000,ko00001,ko01000	branched-chain-amino-acid transaminase activity
PAFIPGJD_00850	1.04e-246	pabB	2.6.1.85, 4.1.3.27, 4.1.3.38	-	EH	ko:K01665,ko:K03342,ko:K13503,ko:K13950	ko00400,ko00790,ko01100,ko01110,ko01130,ko01230,map00400,map00790,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PAFIPGJD_00851	2.09e-150	-	4.1.3.27	-	EH	ko:K01658	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Peptidase C26
PAFIPGJD_00852	4.49e-269	-	-	-	C	-	-	-	NADH:flavin oxidoreductase / NADH oxidase family
PAFIPGJD_00853	2.5e-170	-	-	-	S	-	-	-	Integral membrane protein (intg_mem_TP0381)
PAFIPGJD_00854	2.11e-118	-	-	-	T	ko:K07005	-	ko00000	pyridoxamine 5'-phosphate
PAFIPGJD_00855	7.17e-172	-	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Glutamine amidotransferase class-I
PAFIPGJD_00857	2.87e-112	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Cys-tRNA(Pro) hydrolase activity
PAFIPGJD_00858	0.0	mmyX	5.3.1.12	-	F	ko:K01812,ko:K07149,ko:K16139	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000,ko02000	Psort location Cytoplasmic, score
PAFIPGJD_00859	6.74e-106	-	-	-	-	-	-	-	-
PAFIPGJD_00861	4.37e-147	-	-	-	Q	-	-	-	PA14
PAFIPGJD_00862	0.0	-	2.1.1.13	-	E	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	B12 binding domain
PAFIPGJD_00863	1.66e-171	-	-	-	S	-	-	-	Putative threonine/serine exporter
PAFIPGJD_00864	1.45e-102	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PAFIPGJD_00865	2.37e-312	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PAFIPGJD_00866	1.3e-06	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain protein
PAFIPGJD_00867	6.62e-57	-	3.1.21.3	-	L	ko:K01154	-	ko00000,ko01000,ko02048	DNA specificity domain
PAFIPGJD_00868	6.93e-141	-	-	-	K	-	-	-	Fic/DOC family
PAFIPGJD_00869	1.36e-168	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAFIPGJD_00870	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PAFIPGJD_00872	0.0	-	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Homoserine dehydrogenase
PAFIPGJD_00873	2.52e-281	-	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Amino acid kinase family
PAFIPGJD_00874	1.12e-116	agmK	1.8.1.8	-	O	ko:K03671,ko:K03672	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko01000,ko03110	belongs to the thioredoxin family
PAFIPGJD_00875	2.72e-181	-	-	-	S	-	-	-	Integral membrane protein (intg_mem_TP0381)
PAFIPGJD_00878	2.18e-218	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PAFIPGJD_00879	5.88e-259	-	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	endonuclease III
PAFIPGJD_00880	4.25e-144	aat	2.3.2.6	-	O	ko:K00684	-	ko00000,ko01000	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
PAFIPGJD_00881	0.0	-	2.7.9.1	-	G	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
PAFIPGJD_00882	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Phosphoglucose isomerase
PAFIPGJD_00883	3.86e-261	-	-	-	S	-	-	-	COG0790 FOG TPR repeat, SEL1 subfamily
PAFIPGJD_00884	4.45e-225	-	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	S-adenosylmethionine-dependent methyltransferase
PAFIPGJD_00886	0.0	-	5.4.99.2	-	I	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Methylmalonyl-CoA mutase
PAFIPGJD_00887	0.0	-	5.4.99.2	-	I	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Methylmalonyl-CoA mutase
PAFIPGJD_00888	2.48e-187	-	-	-	D	-	-	-	nuclear chromosome segregation
PAFIPGJD_00890	1.26e-10	-	-	-	D	-	-	-	nuclear chromosome segregation
PAFIPGJD_00891	2.94e-131	-	-	-	-	-	-	-	-
PAFIPGJD_00892	2.75e-244	-	-	-	I	-	-	-	PFAM Prenyltransferase squalene oxidase
PAFIPGJD_00895	8.93e-181	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Pyrroline-5-carboxylate reductase dimerisation
PAFIPGJD_00896	4.69e-159	-	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Methyladenine glycosylase
PAFIPGJD_00897	5.51e-211	-	-	-	S	-	-	-	ABC-type transport system involved in multi-copper enzyme maturation permease component
PAFIPGJD_00898	6.59e-227	-	-	-	S	-	-	-	Protein conserved in bacteria
PAFIPGJD_00899	2.01e-34	-	-	-	KLT	-	-	-	Tyrosine-protein kinase, subgroup, catalytic domain
PAFIPGJD_00900	0.0	-	4.1.99.1	-	E	ko:K01667	ko00380,map00380	ko00000,ko00001,ko01000	Beta-eliminating lyase
PAFIPGJD_00901	6.76e-143	-	-	-	M	-	-	-	Peptidoglycan-binding domain 1 protein
PAFIPGJD_00902	1.75e-255	-	-	-	S	-	-	-	Domain of unknown function (DUF4105)
PAFIPGJD_00903	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	B3/4 domain
PAFIPGJD_00904	6.99e-242	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Aminoacyl tRNA synthetase class II, N-terminal domain
PAFIPGJD_00905	1.11e-283	-	-	-	P	ko:K03449	-	ko00000,ko02000	Major Facilitator Superfamily
PAFIPGJD_00906	0.0	-	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	transmembrane transport
PAFIPGJD_00907	0.0	htpG	-	-	O	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	Hsp90 protein
PAFIPGJD_00908	6.67e-172	-	-	-	P	ko:K10716	-	ko00000,ko02000	domain protein
PAFIPGJD_00909	1.95e-273	-	5.1.1.1	-	M	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAFIPGJD_00910	9.25e-103	-	-	-	K	-	-	-	Transcriptional regulator
PAFIPGJD_00911	8.64e-312	-	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Cys/Met metabolism PLP-dependent enzyme
PAFIPGJD_00912	9.2e-215	-	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
PAFIPGJD_00913	8.4e-136	thiE	2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17	-	H	ko:K00788,ko:K03147,ko:K14153	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PAFIPGJD_00914	8.1e-114	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PAFIPGJD_00915	4.27e-117	gepA	-	-	K	-	-	-	Phage-associated protein
PAFIPGJD_00917	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycoside hydrolase, family 20, catalytic core
PAFIPGJD_00918	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycoside hydrolase, family 20, catalytic core
PAFIPGJD_00919	1.21e-241	-	-	-	E	ko:K07588	-	ko00000,ko01000	ArgK protein
PAFIPGJD_00920	1.82e-112	-	-	-	F	ko:K08311	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	NUDIX domain
PAFIPGJD_00921	0.0	sepA	-	-	Q	-	-	-	COG2015, Alkyl sulfatase and related hydrolases
PAFIPGJD_00922	4.02e-121	-	-	-	-	-	-	-	-
PAFIPGJD_00923	1.71e-110	ruvC	3.1.22.4	-	L	ko:K01159	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PAFIPGJD_00924	1.48e-291	-	-	-	L	-	-	-	helicase superfamily c-terminal domain
PAFIPGJD_00925	1.16e-158	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PAFIPGJD_00926	8.82e-241	-	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Amidohydrolase
PAFIPGJD_00928	1.69e-107	-	-	-	K	-	-	-	DNA-binding transcription factor activity
PAFIPGJD_00929	4.2e-264	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Biotin-lipoyl like
PAFIPGJD_00930	0.0	-	-	-	V	-	-	-	AcrB/AcrD/AcrF family
PAFIPGJD_00931	8.33e-114	-	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Dihydrofolate reductase
PAFIPGJD_00932	5.77e-208	-	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Thymidylate synthase
PAFIPGJD_00933	0.0	-	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Phospholipase D. Active site motifs.
PAFIPGJD_00934	0.0	-	4.1.1.3	-	C	ko:K01571	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	HMGL-like
PAFIPGJD_00936	0.0	-	-	-	V	ko:K03327	-	ko00000,ko02000	MatE
PAFIPGJD_00937	1.23e-255	-	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Iron-sulfur cluster assembly protein
PAFIPGJD_00938	6.78e-42	-	-	-	S	-	-	-	PurA ssDNA and RNA-binding protein
PAFIPGJD_00940	0.0	-	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	LeuA allosteric (dimerisation) domain
PAFIPGJD_00941	0.0	prlC	3.4.24.70	-	E	ko:K01414	-	ko00000,ko01000,ko01002	Peptidase family M3
PAFIPGJD_00942	5.27e-281	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAFIPGJD_00943	0.0	-	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAFIPGJD_00944	0.0	-	-	-	MU	ko:K18139	ko01501,ko02024,map01501,map02024	ko00000,ko00001,ko00002,ko01504,ko02000	Outer membrane efflux protein
PAFIPGJD_00946	0.0	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
PAFIPGJD_00947	1.85e-149	-	-	-	-	-	-	-	-
PAFIPGJD_00950	1.34e-109	ptsN	2.7.1.202	-	G	ko:K02768,ko:K02769,ko:K02770,ko:K02806	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system
PAFIPGJD_00951	0.0	-	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	C-terminal, D2-small domain, of ClpB protein
PAFIPGJD_00953	1.29e-230	-	-	-	K	-	-	-	DNA-binding transcription factor activity
PAFIPGJD_00955	1.05e-15	-	-	-	M	-	-	-	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PAFIPGJD_00956	1.66e-33	-	-	-	S	-	-	-	conserved domain
PAFIPGJD_00957	3.39e-92	-	-	-	L	-	-	-	IMG reference gene
PAFIPGJD_00958	7.36e-56	-	-	-	S	-	-	-	PFAM Cupin 2 conserved barrel domain protein
PAFIPGJD_00959	6.76e-131	-	3.6.3.12	-	P	ko:K01548	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PAFIPGJD_00960	0.0	-	3.6.3.12	-	P	ko:K01547	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PAFIPGJD_00961	0.0	-	3.6.3.12	-	P	ko:K01546	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PAFIPGJD_00963	2.4e-167	-	-	-	T	ko:K07667	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
PAFIPGJD_00964	0.0	-	2.7.13.3	-	T	ko:K07646	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Osmosensitive K+ channel His kinase sensor domain
PAFIPGJD_00966	2.66e-06	-	-	-	-	-	-	-	-
PAFIPGJD_00967	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Beta galactosidase small chain
PAFIPGJD_00968	1.78e-266	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2219)
PAFIPGJD_00969	4.37e-203	-	-	-	L	ko:K03424	-	ko00000,ko01000	TatD related DNase
PAFIPGJD_00970	2.63e-84	-	-	-	M	-	-	-	Lysin motif
PAFIPGJD_00971	3.05e-180	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
PAFIPGJD_00972	0.0	-	-	-	V	-	-	-	MatE
PAFIPGJD_00973	7.09e-251	-	3.3.1.1	-	H	ko:K01251	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	adenosylhomocysteinase activity
PAFIPGJD_00975	1.02e-258	-	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAFIPGJD_00977	9.86e-158	-	-	-	M	-	-	-	Bacterial transferase hexapeptide (six repeats)
PAFIPGJD_00978	9.16e-266	-	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	RibD C-terminal domain
PAFIPGJD_00979	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PAFIPGJD_00980	4.27e-273	-	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III, delta subunit
PAFIPGJD_00981	0.0	-	-	-	O	-	-	-	Trypsin
PAFIPGJD_00982	1.18e-109	-	2.2.1.6	-	E	ko:K01653	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	ACT domain
PAFIPGJD_00983	0.0	-	3.6.4.13	-	L	ko:K03578	-	ko00000,ko01000	Oligonucleotide/oligosaccharide-binding (OB)-fold
PAFIPGJD_00984	3.52e-161	-	-	-	P	ko:K03499	-	ko00000,ko02000	TrkA-N domain
PAFIPGJD_00985	0.0	-	-	-	P	-	-	-	Cation transport protein
PAFIPGJD_00987	3.14e-179	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PAFIPGJD_00988	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF4091)
PAFIPGJD_00989	3.2e-70	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PAFIPGJD_00990	1.32e-101	manC	-	-	S	-	-	-	Cupin domain
PAFIPGJD_00991	0.0	-	1.2.7.1	-	C	ko:K03737	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
PAFIPGJD_00993	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class II (D, K and N)
PAFIPGJD_00994	1.02e-187	pppL	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	protein serine/threonine phosphatase activity
PAFIPGJD_00995	4.34e-152	-	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Glycerol-3-phosphate acyltransferase
PAFIPGJD_00996	8.08e-236	gpsA	1.1.1.94	-	C	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PAFIPGJD_00997	8.62e-102	-	-	-	-	-	-	-	-
PAFIPGJD_00999	1.71e-264	pqqE	-	-	C	ko:K06139	-	ko00000	SMART Elongator protein 3 MiaB NifB
PAFIPGJD_01000	1.32e-313	pqqE	-	-	C	ko:K06139	-	ko00000	SMART Elongator protein 3 MiaB NifB
PAFIPGJD_01001	0.0	metY	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Cys/Met metabolism PLP-dependent enzyme
PAFIPGJD_01002	5.93e-05	-	-	-	-	-	-	-	-
PAFIPGJD_01003	0.0	-	-	-	O	ko:K07391	-	ko00000	Magnesium chelatase, subunit ChlI C-terminal
PAFIPGJD_01004	1.21e-210	-	-	-	S	-	-	-	Rhomboid family
PAFIPGJD_01005	2.63e-269	-	-	-	E	-	-	-	FAD dependent oxidoreductase
PAFIPGJD_01006	2.64e-267	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PAFIPGJD_01009	0.0	-	-	-	S	-	-	-	Phosphoadenosine phosphosulfate reductase
PAFIPGJD_01010	3.45e-121	-	-	-	K	-	-	-	ParB domain protein nuclease
PAFIPGJD_01013	2.63e-115	-	-	-	L	-	-	-	Staphylococcal nuclease homologues
PAFIPGJD_01014	6.84e-248	-	-	-	M	-	-	-	Alginate lyase
PAFIPGJD_01015	3.1e-207	-	-	-	IQ	-	-	-	KR domain
PAFIPGJD_01018	7.17e-104	yciA	-	-	I	ko:K10806	ko01040,map01040	ko00000,ko00001,ko01000,ko01004	acyl-coa hydrolase
PAFIPGJD_01019	9.75e-316	hsrA	-	-	EGP	-	-	-	Major facilitator Superfamily
PAFIPGJD_01020	1.41e-289	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
PAFIPGJD_01021	5.6e-241	-	-	-	CH	-	-	-	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PAFIPGJD_01022	4.57e-181	-	-	-	CH	-	-	-	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PAFIPGJD_01023	0.0	-	3.2.1.23	-	G	ko:K01190,ko:K12308	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolases family 35
PAFIPGJD_01024	8.77e-158	-	-	-	C	-	-	-	Nitroreductase family
PAFIPGJD_01025	0.0	-	-	-	E	-	-	-	Transglutaminase-like
PAFIPGJD_01026	5.58e-110	-	-	-	S	-	-	-	Bacterial transferase hexapeptide (six repeats)
PAFIPGJD_01027	6.56e-112	-	-	-	S	ko:K08999	-	ko00000	Bifunctional nuclease
PAFIPGJD_01029	0.0	-	-	-	P	-	-	-	Citrate transporter
PAFIPGJD_01031	2.8e-258	-	-	-	S	-	-	-	Glycosyltransferase family 10 (fucosyltransferase) C-term
PAFIPGJD_01032	0.0	-	-	-	I	-	-	-	Acyltransferase family
PAFIPGJD_01033	2.57e-253	-	-	-	S	-	-	-	Glycosyltransferase family 10 (fucosyltransferase) C-term
PAFIPGJD_01034	5.02e-310	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAFIPGJD_01035	1.03e-204	-	-	-	-	-	-	-	-
PAFIPGJD_01036	2.74e-288	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAFIPGJD_01037	2.26e-245	-	5.1.3.20	-	M	ko:K03274	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	3-beta hydroxysteroid dehydrogenase/isomerase family
PAFIPGJD_01038	5.48e-235	-	-	GT9	M	ko:K02843,ko:K02849	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	ADP-heptose-lipopolysaccharide heptosyltransferase activity
PAFIPGJD_01039	6.79e-249	-	-	-	S	-	-	-	Glycosyltransferase like family 2
PAFIPGJD_01040	9.15e-244	-	-	-	H	-	-	-	PFAM glycosyl transferase family 8
PAFIPGJD_01041	1.03e-207	lpxG	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase
PAFIPGJD_01043	2.08e-241	-	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain
PAFIPGJD_01044	9.36e-171	truB	5.4.99.25	-	J	ko:K03177	-	ko00000,ko01000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAFIPGJD_01045	5.8e-219	-	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin kinase
PAFIPGJD_01046	9e-65	panD	4.1.1.11	-	H	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PAFIPGJD_01047	3.86e-76	-	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase SecG subunit
PAFIPGJD_01048	3.3e-151	-	-	-	NU	-	-	-	Prokaryotic N-terminal methylation motif
PAFIPGJD_01049	6.87e-256	-	2.5.1.54	-	E	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PAFIPGJD_01050	3.17e-129	-	-	-	-	-	-	-	-
PAFIPGJD_01051	1.02e-232	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PAFIPGJD_01052	1.41e-30	-	-	-	S	-	-	-	NYN domain
PAFIPGJD_01053	6.43e-153	ppaX_1	3.1.3.18, 3.6.1.1	-	S	ko:K01091,ko:K06019	ko00190,ko00630,ko01100,ko01110,ko01130,map00190,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	glycolate biosynthetic process
PAFIPGJD_01054	6.45e-138	-	-	-	S	-	-	-	Maltose acetyltransferase
PAFIPGJD_01055	0.0	-	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	GMP synthase C terminal domain
PAFIPGJD_01056	0.0	-	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	IMP dehydrogenase / GMP reductase domain
PAFIPGJD_01057	3.5e-121	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Low molecular weight phosphatase family
PAFIPGJD_01058	0.0	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
PAFIPGJD_01063	6.32e-77	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
PAFIPGJD_01067	5.87e-32	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAFIPGJD_01068	8.36e-119	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAFIPGJD_01069	3.47e-59	cas4	3.1.12.1	-	L	ko:K07464	-	ko00000,ko01000,ko02048	crispr-associated protein cas4
PAFIPGJD_01070	1.07e-83	cas3	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	DEAD-like helicases superfamily
PAFIPGJD_01071	6.97e-107	-	-	-	S	ko:K19119	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas5)
PAFIPGJD_01072	1.29e-133	csd1	3.5.1.28	-	M	ko:K01447,ko:K17733,ko:K19117	-	ko00000,ko01000,ko01002,ko01011,ko02048	N-Acetylmuramoyl-L-alanine amidase
PAFIPGJD_01073	3.05e-116	csd2	-	-	L	ko:K19118	-	ko00000,ko02048	CRISPR-associated protein, Csd2 family
PAFIPGJD_01074	7.62e-284	-	-	-	S	-	-	-	Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units
PAFIPGJD_01075	0.0	-	1.2.1.88, 1.5.5.2	-	CE	ko:K13821	ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko03000	Proline dehydrogenase
PAFIPGJD_01077	1.01e-45	-	-	-	S	-	-	-	R3H domain
PAFIPGJD_01079	0.0	-	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Catalase
PAFIPGJD_01081	0.0	-	-	-	O	-	-	-	Cytochrome C assembly protein
PAFIPGJD_01082	1.08e-136	rbr	-	-	C	-	-	-	Rubrerythrin
PAFIPGJD_01083	7.6e-145	-	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PAFIPGJD_01085	0.0	-	-	-	D	ko:K03466	-	ko00000,ko03036	Ftsk_gamma
PAFIPGJD_01086	5.68e-180	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	polysaccharide export
PAFIPGJD_01087	0.0	gumC	-	-	DM	ko:K16554	ko05111,map05111	ko00000,ko00001,ko02000	PFAM lipopolysaccharide biosynthesis protein
PAFIPGJD_01088	9.48e-165	-	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	protein tyrosine phosphatase activity
PAFIPGJD_01089	6.88e-176	-	-	-	M	-	-	-	Bacterial sugar transferase
PAFIPGJD_01090	1.77e-191	wbyL	-	GT2	M	ko:K13002	-	ko00000,ko01000,ko01003,ko01005	transferase activity, transferring glycosyl groups
PAFIPGJD_01091	3.33e-289	lsgC	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PAFIPGJD_01092	8.15e-285	lsgC	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PAFIPGJD_01093	9.22e-290	gtf1	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	transferase activity, transferring glycosyl groups
PAFIPGJD_01094	1.71e-241	-	-	-	-	-	-	-	-
PAFIPGJD_01095	9.16e-264	-	-	-	M	ko:K02847,ko:K13009	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005,ko02000	-O-antigen
PAFIPGJD_01096	2.42e-198	-	-	-	S	-	-	-	Glycosyl transferase family 11
PAFIPGJD_01097	1.32e-249	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAFIPGJD_01098	1.47e-265	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PAFIPGJD_01099	3.29e-279	lsgC	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PAFIPGJD_01100	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_01101	2.67e-113	-	-	-	S	ko:K03818	-	ko00000,ko01000	maltose O-acetyltransferase activity
PAFIPGJD_01102	3.34e-208	-	-	-	M	-	-	-	PFAM glycosyl transferase family 2
PAFIPGJD_01103	6.17e-237	-	-	-	M	-	-	-	Glycosyl transferase, family 2
PAFIPGJD_01104	1.58e-25	-	-	-	M	-	-	-	Glycosyltransferase group 2 family protein
PAFIPGJD_01105	3.13e-123	-	-	-	C	-	-	-	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAFIPGJD_01106	0.0	-	-	-	S	-	-	-	polysaccharide biosynthetic process
PAFIPGJD_01107	3.82e-231	-	-	-	C	-	-	-	Nitroreductase family
PAFIPGJD_01108	0.0	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
PAFIPGJD_01110	6.17e-284	-	-	-	S	-	-	-	very-long-chain-acyl-CoA dehydrogenase activity
PAFIPGJD_01111	1.19e-92	-	5.1.3.29	-	G	ko:K02431	-	ko00000,ko01000	RbsD / FucU transport protein family
PAFIPGJD_01112	2.14e-300	-	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase class I and II
PAFIPGJD_01113	0.0	-	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class I (C) catalytic domain
PAFIPGJD_01114	0.0	menD	2.2.1.9	-	H	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PAFIPGJD_01117	4.24e-314	-	1.1.1.40	-	C	ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,map00620,map00710,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Malic enzyme, NAD binding domain
PAFIPGJD_01118	0.0	-	-	-	I	ko:K06889,ko:K09914	-	ko00000	PFAM Prenyltransferase squalene oxidase
PAFIPGJD_01119	4.86e-230	exsH	3.2.1.178, 3.2.1.18, 3.2.1.52	GH16,GH20,GH33	G	ko:K01186,ko:K12373,ko:K20830	ko00511,ko00513,ko00520,ko00531,ko00600,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00600,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko02042,ko03110	xyloglucan:xyloglucosyl transferase activity
PAFIPGJD_01120	1.02e-256	-	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolase family 3 N terminal domain
PAFIPGJD_01121	2.76e-129	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAFIPGJD_01122	3.06e-157	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
PAFIPGJD_01123	0.0	yidC	-	-	O	ko:K03217,ko:K06872	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	serine-type endopeptidase activity
PAFIPGJD_01124	1.08e-266	-	-	-	H	-	-	-	Elongator protein 3, MiaB family, Radical SAM
PAFIPGJD_01129	1.47e-19	-	-	-	H	-	-	-	Elongator protein 3, MiaB family, Radical SAM
PAFIPGJD_01131	2.56e-309	-	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Seryl-tRNA synthetase N-terminal domain
PAFIPGJD_01132	2.36e-273	-	-	-	E	-	-	-	Alcohol dehydrogenase GroES-like domain
PAFIPGJD_01134	2.46e-216	-	3.5.1.53	-	K	ko:K12251	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Carbon-nitrogen hydrolase
PAFIPGJD_01135	3.82e-231	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
PAFIPGJD_01136	4.58e-215	-	-	-	S	-	-	-	Protein of unknown function DUF58
PAFIPGJD_01137	2.63e-135	-	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	Peptidyl-tRNA hydrolase
PAFIPGJD_01138	0.0	-	-	-	M	-	-	-	Transglycosylase
PAFIPGJD_01139	0.0	-	3.4.24.3	-	NU	ko:K01387	-	ko00000,ko01000,ko01002,ko02042	translation initiation factor activity
PAFIPGJD_01140	0.0	-	-	-	H	-	-	-	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAFIPGJD_01141	9.83e-317	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAFIPGJD_01143	0.0	-	-	-	M	ko:K07267	-	ko00000,ko02000	wide pore channel activity
PAFIPGJD_01144	6.94e-298	-	1.12.99.6	-	C	ko:K06282	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	NiFe/NiFeSe hydrogenase small subunit C-terminal
PAFIPGJD_01145	0.0	-	1.12.99.6	-	C	ko:K06281	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	Nickel-dependent hydrogenase
PAFIPGJD_01146	6.49e-290	hyaC	-	-	C	ko:K03620	ko02020,map02020	ko00000,ko00001	Prokaryotic cytochrome b561
PAFIPGJD_01147	3.4e-126	-	-	-	C	ko:K03605	-	ko00000,ko01000,ko01002	Hydrogenase maturation protease
PAFIPGJD_01148	4.94e-75	-	-	-	C	ko:K04651	-	ko00000,ko03110	Hydrogenase/urease nickel incorporation, metallochaperone, hypA
PAFIPGJD_01150	6.77e-87	-	-	-	S	ko:K09940	-	ko00000	Domain of unknown function (DUF4870)
PAFIPGJD_01151	1.22e-89	-	-	-	M	-	-	-	NLP P60 protein
PAFIPGJD_01152	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, domain 2
PAFIPGJD_01153	8.43e-155	-	1.5.1.34	-	C	ko:K10679	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	Nitroreductase family
PAFIPGJD_01154	5.93e-261	-	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class I and II
PAFIPGJD_01158	0.0	secD	-	-	U	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
PAFIPGJD_01159	2.57e-251	-	-	-	S	ko:K11941	-	ko00000,ko01000	transferase activity, transferring acyl groups other than amino-acyl groups
PAFIPGJD_01160	0.0	-	4.2.1.2	-	C	ko:K01676	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible hydration of fumarate to (S)- malate
PAFIPGJD_01162	5.32e-108	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
PAFIPGJD_01164	0.0	-	3.2.1.52	GH20	G	ko:K01207,ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko01501,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map01501,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycoside hydrolase, family 20, catalytic core
PAFIPGJD_01165	2.27e-201	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAFIPGJD_01166	4.07e-78	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAFIPGJD_01167	1.38e-226	-	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Quinolinate synthetase A protein
PAFIPGJD_01168	8.56e-247	-	-	-	S	-	-	-	Putative S-adenosyl-L-methionine-dependent methyltransferase
PAFIPGJD_01169	3.09e-69	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAFIPGJD_01170	2.25e-105	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAFIPGJD_01171	4.08e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAFIPGJD_01172	5.36e-138	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAFIPGJD_01173	1.53e-47	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal proteins 50S L24/mitochondrial 39S L24
PAFIPGJD_01174	4.9e-207	nadK	2.7.1.23	-	G	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAFIPGJD_01175	1.77e-124	-	-	-	M	ko:K03642	-	ko00000	Lytic transglycolase
PAFIPGJD_01176	0.0	-	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
PAFIPGJD_01177	0.0	-	2.7.11.1	-	L	ko:K08282	-	ko00000,ko01000	SNF2 Helicase protein
PAFIPGJD_01178	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PAFIPGJD_01180	1.53e-286	-	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Mur ligase middle domain
PAFIPGJD_01181	0.0	-	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Collagenase
PAFIPGJD_01183	0.0	rnr	-	-	K	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PAFIPGJD_01184	6.52e-75	-	-	-	L	-	-	-	Cupin 2, conserved barrel domain protein
PAFIPGJD_01185	7.1e-130	-	-	-	S	-	-	-	Cobalamin adenosyltransferase
PAFIPGJD_01187	3.53e-295	-	-	-	EGP	-	-	-	Major facilitator Superfamily
PAFIPGJD_01188	4.55e-213	-	-	-	K	-	-	-	LysR substrate binding domain
PAFIPGJD_01189	3.36e-271	-	-	-	S	-	-	-	tRNA-splicing ligase RtcB
PAFIPGJD_01190	0.0	-	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	transmembrane transport
PAFIPGJD_01192	2.51e-284	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAFIPGJD_01194	2.57e-133	-	-	-	D	-	-	-	ErfK ybiS ycfS ynhG family protein
PAFIPGJD_01195	0.0	-	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Aconitase C-terminal domain
PAFIPGJD_01196	8.8e-169	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	PFAM N-acetylmuramoyl-L-alanine amidase family 2
PAFIPGJD_01200	0.0	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Bacterial DNA topoisomeraes I ATP-binding domain
PAFIPGJD_01201	4.53e-100	-	-	-	-	-	-	-	-
PAFIPGJD_01202	0.0	-	2.1.1.107, 4.2.1.75	-	H	ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase HemD
PAFIPGJD_01203	2.24e-101	-	-	-	S	-	-	-	peptidase
PAFIPGJD_01204	5.18e-172	-	-	-	S	ko:K06973	-	ko00000	Putative neutral zinc metallopeptidase
PAFIPGJD_01205	2.1e-99	-	-	-	S	-	-	-	peptidase
PAFIPGJD_01206	0.0	-	-	-	S	-	-	-	pathogenesis
PAFIPGJD_01207	0.0	-	-	-	V	ko:K18095	ko01501,ko02020,map01501,map02020	ko00000,ko00001,ko00002,ko01504,ko02000	AcrB/AcrD/AcrF family
PAFIPGJD_01208	1e-242	-	-	-	M	ko:K18094	ko01501,ko02020,map01501,map02020	ko00000,ko00001,ko00002,ko01504,ko02000	Biotin-lipoyl like
PAFIPGJD_01209	2.52e-197	-	-	-	K	-	-	-	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
PAFIPGJD_01210	4.6e-221	-	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
PAFIPGJD_01211	9.47e-236	-	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, pyrimidine binding domain
PAFIPGJD_01212	1.63e-298	-	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
PAFIPGJD_01213	4.72e-206	-	-	-	S	ko:K09949	-	ko00000	Protein of unknown function (DUF1009)
PAFIPGJD_01216	4.67e-91	-	-	-	-	-	-	-	-
PAFIPGJD_01217	2.28e-170	yyaQ	-	-	V	-	-	-	Protein conserved in bacteria
PAFIPGJD_01218	5.06e-192	-	-	-	M	-	-	-	Glycosyl transferase WecB/TagA/CpsF family
PAFIPGJD_01219	3.05e-189	-	3.1.4.55	-	S	ko:K06167	ko00440,map00440	ko00000,ko00001,ko01000	Metallo-beta-lactamase superfamily
PAFIPGJD_01220	0.0	-	-	-	L	ko:K03631	-	ko00000,ko03400	RecF/RecN/SMC N terminal domain
PAFIPGJD_01221	0.0	-	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	E1-E2 ATPase
PAFIPGJD_01222	1.16e-244	-	-	-	G	-	-	-	Glycosyl hydrolases family 16
PAFIPGJD_01223	9.29e-132	-	-	-	J	ko:K02356	-	ko00000,ko03012	Elongation factor P (EF-P) OB domain
PAFIPGJD_01224	1.2e-105	-	-	-	S	-	-	-	ACT domain protein
PAFIPGJD_01225	1.95e-312	-	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-III
PAFIPGJD_01226	3.06e-85	-	-	-	M	ko:K03282	-	ko00000,ko02000	Large-conductance mechanosensitive channel, MscL
PAFIPGJD_01227	2.05e-277	-	3.1.3.1	-	P	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Alkaline phosphatase homologues
PAFIPGJD_01228	4.06e-287	-	-	-	EGP	-	-	-	Major facilitator Superfamily
PAFIPGJD_01229	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycoside hydrolase, family 20, catalytic core
PAFIPGJD_01230	8.88e-268	-	-	-	G	-	-	-	M42 glutamyl aminopeptidase
PAFIPGJD_01232	1.96e-121	ngr	-	-	C	-	-	-	Rubrerythrin
PAFIPGJD_01234	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF1705)
PAFIPGJD_01235	0.0	-	-	-	M	-	-	-	Glycosyl Hydrolase Family 88
PAFIPGJD_01236	0.0	-	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Anaerobic ribonucleoside-triphosphate reductase
PAFIPGJD_01237	3.8e-43	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	CTP reductase activity
PAFIPGJD_01238	1.07e-188	-	1.97.1.4	-	O	ko:K04069	-	ko00000,ko01000	Radical SAM superfamily
PAFIPGJD_01239	0.0	-	-	-	P	ko:K14445	-	ko00000,ko02000	Citrate transporter
PAFIPGJD_01240	0.0	-	-	-	T	-	-	-	Histidine kinase
PAFIPGJD_01241	2.68e-110	-	-	-	T	ko:K03413	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	cheY-homologous receiver domain
PAFIPGJD_01242	0.0	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
PAFIPGJD_01243	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Glycosyl hydrolase family 36 N-terminal domain
PAFIPGJD_01244	7.36e-55	himA	-	-	L	ko:K03530,ko:K04764,ko:K05788	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PAFIPGJD_01245	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_01248	3.31e-303	-	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	tRNA (Uracil-5-)-methyltransferase
PAFIPGJD_01249	0.0	miaB	2.8.4.3	-	J	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PAFIPGJD_01250	0.0	-	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein
PAFIPGJD_01251	3.29e-258	-	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAFIPGJD_01252	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PAFIPGJD_01253	1.47e-204	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PAFIPGJD_01254	1.73e-307	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAFIPGJD_01255	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_01256	1.45e-162	-	-	-	S	-	-	-	SWIM zinc finger
PAFIPGJD_01257	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Argininosuccinate lyase C-terminal
PAFIPGJD_01258	0.0	-	-	-	U	ko:K03321	-	ko00000,ko02000	Sulfate permease family
PAFIPGJD_01259	8.76e-126	-	-	-	-	-	-	-	-
PAFIPGJD_01260	1.04e-109	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PAFIPGJD_01262	0.0	-	-	-	S	-	-	-	Carbohydrate esterase, sialic acid-specific acetylesterase
PAFIPGJD_01270	3.01e-188	-	5.2.1.8	-	O	ko:K03773	-	ko00000,ko01000,ko03110	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
PAFIPGJD_01271	4.4e-138	-	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PAFIPGJD_01272	2.46e-272	-	-	-	E	ko:K19689	-	ko00000,ko01000,ko01002	Thermophilic metalloprotease (M29)
PAFIPGJD_01273	2.09e-207	-	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
PAFIPGJD_01274	0.0	-	-	-	P	ko:K03455	-	ko00000	TrkA-N domain
PAFIPGJD_01275	1.2e-167	-	-	-	L	ko:K03424	-	ko00000,ko01000	TatD related DNase
PAFIPGJD_01281	1.14e-134	panZ	-	-	K	-	-	-	-acetyltransferase
PAFIPGJD_01282	2.11e-219	-	-	-	E	ko:K00612	-	ko00000,ko01000	lipolytic protein G-D-S-L family
PAFIPGJD_01283	7.15e-221	-	1.8.1.9	-	O	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Pyridine nucleotide-disulphide oxidoreductase
PAFIPGJD_01284	0.0	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase alpha chain
PAFIPGJD_01285	1.11e-175	-	-	-	-	-	-	-	-
PAFIPGJD_01287	9.55e-242	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAFIPGJD_01288	2.63e-208	-	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Polyprenyl synthetase
PAFIPGJD_01289	1.19e-199	-	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Quinolinate phosphoribosyl transferase, N-terminal domain
PAFIPGJD_01290	3.45e-157	-	1.4.3.5	-	H	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)
PAFIPGJD_01291	2.45e-211	-	5.1.3.15	-	G	ko:K01792	ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Aldose 1-epimerase
PAFIPGJD_01292	0.0	-	-	-	G	-	-	-	Trehalase
PAFIPGJD_01293	0.0	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PAFIPGJD_01294	0.0	glnA	6.3.1.2	-	S	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PAFIPGJD_01295	1.1e-34	-	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L34
PAFIPGJD_01296	4.9e-76	-	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	Ribonuclease P
PAFIPGJD_01297	1.09e-59	-	-	-	S	ko:K08998	-	ko00000	Haemolytic
PAFIPGJD_01298	0.0	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
PAFIPGJD_01299	0.0	-	1.4.1.13, 1.4.1.14	-	E	ko:K00265	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	GXGXG motif
PAFIPGJD_01300	0.0	glnA	6.3.1.2	-	S	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PAFIPGJD_01301	0.0	-	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PAFIPGJD_01302	3.11e-272	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase small chain, CPSase domain
PAFIPGJD_01303	6.96e-265	-	4.2.1.47	-	M	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PAFIPGJD_01304	1.31e-268	fcl	1.1.1.271	-	GM	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PAFIPGJD_01305	8.01e-294	-	-	-	C	-	-	-	Na+/H+ antiporter family
PAFIPGJD_01306	1.11e-236	-	-	-	-	-	-	-	-
PAFIPGJD_01307	3.4e-229	-	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphomannose isomerase type I
PAFIPGJD_01308	1.29e-181	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	PFAM N-acetylmuramoyl-L-alanine amidase family 2
PAFIPGJD_01309	1.93e-117	ispF	4.6.1.12	-	I	ko:K01770	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PAFIPGJD_01310	6.64e-185	-	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase family
PAFIPGJD_01311	3.98e-235	-	-	-	M	-	-	-	PFAM glycosyl transferase family 51
PAFIPGJD_01312	4.15e-178	-	-	-	M	-	-	-	PFAM glycosyl transferase family 51
PAFIPGJD_01313	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAFIPGJD_01314	6.23e-97	-	-	-	U	ko:K03559	-	ko00000,ko02000	Biopolymer transport protein ExbD/TolR
PAFIPGJD_01315	6.34e-183	-	-	-	U	ko:K03561	-	ko00000,ko02000	MotA/TolQ/ExbB proton channel family
PAFIPGJD_01316	0.0	-	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAFIPGJD_01317	1.27e-99	-	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Predicted SPOUT methyltransferase
PAFIPGJD_01318	1.67e-86	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S9/S16
PAFIPGJD_01319	2.79e-97	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAFIPGJD_01320	6.12e-40	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAFIPGJD_01321	0.0	nnrD	4.2.1.136, 5.1.99.6	-	G	ko:K17758,ko:K17759	-	ko00000,ko01000	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAFIPGJD_01322	1.69e-174	-	-	-	L	ko:K03630	-	ko00000	RadC-like JAB domain
PAFIPGJD_01324	4.03e-174	-	-	-	D	-	-	-	Phage-related minor tail protein
PAFIPGJD_01326	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAFIPGJD_01327	8.25e-63	-	-	-	L	ko:K09747	-	ko00000	YbaB/EbfC DNA-binding family
PAFIPGJD_01328	1.89e-253	-	-	-	N	ko:K18353	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01504	Endonuclease Exonuclease Phosphatase
PAFIPGJD_01329	0.0	-	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	DHHA2
PAFIPGJD_01331	5.46e-189	-	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
PAFIPGJD_01332	0.0	-	-	-	S	-	-	-	OPT oligopeptide transporter protein
PAFIPGJD_01333	0.000651	-	-	-	-	-	-	-	-
PAFIPGJD_01334	0.0	-	-	-	G	-	-	-	Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain
PAFIPGJD_01335	1.26e-94	-	-	-	U	-	-	-	Passenger-associated-transport-repeat
PAFIPGJD_01337	6.21e-39	-	-	-	-	-	-	-	-
PAFIPGJD_01338	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAFIPGJD_01340	9.83e-235	-	-	-	CO	-	-	-	Thioredoxin-like
PAFIPGJD_01341	0.0	-	-	-	P	-	-	-	Domain of unknown function (DUF4976)
PAFIPGJD_01342	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycoside hydrolase, family 20, catalytic core
PAFIPGJD_01343	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class I (C) catalytic domain
PAFIPGJD_01344	1.6e-75	-	-	-	G	-	-	-	Cupin 2, conserved barrel domain protein
PAFIPGJD_01345	3.32e-210	ybfH	-	-	EG	-	-	-	spore germination
PAFIPGJD_01346	6.7e-132	-	-	-	-	-	-	-	-
PAFIPGJD_01347	0.0	-	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
PAFIPGJD_01348	1.47e-120	-	5.2.1.8	-	O	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAFIPGJD_01349	7.48e-188	-	-	-	O	ko:K04083	-	ko00000,ko03110	Hsp33 protein
PAFIPGJD_01352	2.93e-233	-	-	-	E	-	-	-	PFAM lipolytic protein G-D-S-L family
PAFIPGJD_01356	2.05e-173	-	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	FtsJ-like methyltransferase
PAFIPGJD_01358	1.84e-171	-	-	-	S	ko:K06911	-	ko00000	Pirin
PAFIPGJD_01359	0.0	-	-	-	M	-	-	-	AsmA-like C-terminal region
PAFIPGJD_01361	1.03e-201	-	-	-	G	-	-	-	Class II Aldolase and Adducin N-terminal domain
PAFIPGJD_01362	0.0	-	2.7.1.51	-	G	ko:K00879	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	FGGY family of carbohydrate kinases, C-terminal domain
PAFIPGJD_01364	0.0	fucI	5.3.1.25, 5.3.1.3	-	G	ko:K01818	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Converts the aldose L-fucose into the corresponding ketose L-fuculose
PAFIPGJD_01365	0.0	-	-	-	G	-	-	-	Major Facilitator Superfamily
PAFIPGJD_01366	1.12e-121	-	-	-	-	-	-	-	-
PAFIPGJD_01367	0.0	-	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	N-terminal domain of BNR-repeat neuraminidase
PAFIPGJD_01369	2.06e-133	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
PAFIPGJD_01370	7.29e-60	csoR	-	-	S	ko:K21600	-	ko00000,ko03000	negative regulation of transcription, DNA-templated
PAFIPGJD_01371	0.0	copA	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	E1-E2 ATPase
PAFIPGJD_01372	0.0	-	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	ThiC-associated domain
PAFIPGJD_01373	2.19e-220	ytpP	2.7.1.180, 5.3.4.1	-	CO	ko:K01829,ko:K03671,ko:K03734,ko:K06196	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko01000,ko02000,ko03110	cell redox homeostasis
PAFIPGJD_01374	1.3e-139	-	-	-	K	-	-	-	ECF sigma factor
PAFIPGJD_01376	4.78e-222	-	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
PAFIPGJD_01377	3.06e-232	-	-	-	O	-	-	-	Parallel beta-helix repeats
PAFIPGJD_01378	0.0	-	3.1.5.1	-	F	ko:K01129	ko00230,map00230	ko00000,ko00001,ko01000	Phosphohydrolase-associated domain
PAFIPGJD_01379	1.95e-284	-	-	-	Q	-	-	-	Multicopper oxidase
PAFIPGJD_01380	1.16e-209	-	-	-	EG	-	-	-	EamA-like transporter family
PAFIPGJD_01382	2.2e-274	-	5.1.1.1	-	M	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAFIPGJD_01383	6.48e-244	-	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
PAFIPGJD_01384	9.42e-232	-	-	-	EP	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
PAFIPGJD_01385	0.0	-	-	-	E	ko:K13893	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PAFIPGJD_01386	0.0	-	-	-	P	ko:K13895	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAFIPGJD_01387	0.0	-	-	-	EP	ko:K13894	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAFIPGJD_01388	1.4e-185	-	-	-	T	-	-	-	Calcineurin-like phosphoesterase superfamily domain
PAFIPGJD_01389	1.35e-207	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAFIPGJD_01390	9.98e-223	-	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Ketopantoate reductase PanE/ApbA C terminal
PAFIPGJD_01391	0.0	fhs	6.3.4.3	-	H	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Formate--tetrahydrofolate ligase
PAFIPGJD_01392	5.77e-145	-	-	-	S	ko:K09974	-	ko00000	Domain of unknown function (DUF1287)
PAFIPGJD_01393	8.95e-316	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
PAFIPGJD_01394	3.77e-118	-	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-strand binding protein family
PAFIPGJD_01395	2.52e-281	-	5.4.99.22	-	M	ko:K06178	-	ko00000,ko01000,ko03009	translation initiation factor activity
PAFIPGJD_01396	1.27e-133	-	-	-	U	ko:K03561	-	ko00000,ko02000	MotA/TolQ/ExbB proton channel family
PAFIPGJD_01397	7.4e-93	-	-	-	U	ko:K03559	-	ko00000,ko02000	Biopolymer transport protein ExbD/TolR
PAFIPGJD_01398	8.02e-130	-	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAFIPGJD_01399	8.59e-293	-	3.2.1.1	GH57	G	ko:K07405	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 57
PAFIPGJD_01400	1.25e-315	-	-	-	G	-	-	-	Glycosyl transferase 4-like domain
PAFIPGJD_01401	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolases family 31
PAFIPGJD_01402	6.05e-250	-	5.4.4.2	-	HQ	ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	chorismate binding enzyme
PAFIPGJD_01403	3.94e-296	-	-	-	C	ko:K00185	-	ko00000	Polysulphide reductase, NrfD
PAFIPGJD_01405	7.47e-156	-	-	-	C	-	-	-	Cytochrome c
PAFIPGJD_01406	4.3e-296	-	-	-	P	-	-	-	ABC-type Zn2 transport system, periplasmic component surface adhesin
PAFIPGJD_01409	1.9e-256	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Iron-containing alcohol dehydrogenase
PAFIPGJD_01411	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PAFIPGJD_01412	2.16e-180	-	-	-	C	-	-	-	Cytochrome c7 and related cytochrome c
PAFIPGJD_01413	0.0	-	-	-	C	ko:K00184	-	ko00000	4Fe-4S dicluster domain
PAFIPGJD_01415	0.0	-	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	RecG wedge domain
PAFIPGJD_01416	3.17e-161	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	PFAM N-acetylmuramoyl-L-alanine amidase family 2
PAFIPGJD_01417	0.0	pckG	4.1.1.32	-	C	ko:K01596	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko03320,ko04068,ko04151,ko04152,ko04910,ko04920,ko04922,ko04931,ko04964,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map03320,map04068,map04151,map04152,map04910,map04920,map04922,map04931,map04964	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle
PAFIPGJD_01419	9.05e-85	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	4'-phosphopantetheinyl transferase superfamily
PAFIPGJD_01420	5.64e-173	pdxJ	2.6.99.2	-	H	ko:K03474	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PAFIPGJD_01421	0.0	-	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	AICARFT/IMPCHase bienzyme
PAFIPGJD_01422	1.06e-94	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L9, N-terminal domain
PAFIPGJD_01423	1.81e-227	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
PAFIPGJD_01424	3.2e-209	argB	2.7.2.8	-	E	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Amino acid kinase family
PAFIPGJD_01425	5e-19	-	-	-	S	-	-	-	Lipocalin-like
PAFIPGJD_01427	8.77e-239	cbiM	-	-	P	ko:K02007,ko:K02009,ko:K16915	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt ion transport
PAFIPGJD_01428	2.82e-194	cbiQ	-	-	P	ko:K02007,ko:K02008	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transmembrane transporter activity
PAFIPGJD_01429	1.96e-178	cbiO	-	-	P	ko:K02006,ko:K02008,ko:K16784,ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPase activity
PAFIPGJD_01430	0.0	-	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	HELICc2
PAFIPGJD_01432	1.84e-206	ispE	2.7.1.148	-	I	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
PAFIPGJD_01433	0.0	-	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	TopoisomeraseII
PAFIPGJD_01434	1.06e-173	-	2.5.1.31	-	I	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAFIPGJD_01435	1.98e-258	-	2.7.7.13	-	M	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
PAFIPGJD_01436	2.13e-96	-	-	-	L	ko:K07447	-	ko00000,ko01000	Likely ribonuclease with RNase H fold.
PAFIPGJD_01437	9.07e-234	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PAFIPGJD_01439	1.45e-55	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L28 family
PAFIPGJD_01440	1.04e-49	-	-	-	-	-	-	-	-
PAFIPGJD_01441	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Alpha galactosidase A
PAFIPGJD_01442	7.5e-221	-	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAFIPGJD_01443	0.0	-	-	-	E	-	-	-	Aminotransferase class I and II
PAFIPGJD_01444	4.6e-305	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAFIPGJD_01445	1.04e-78	divIC	-	-	D	ko:K05589,ko:K13052	-	ko00000,ko03036	cell cycle
PAFIPGJD_01446	0.0	-	-	-	P	-	-	-	Sulfatase
PAFIPGJD_01449	8.26e-154	-	-	-	K	-	-	-	Transcriptional regulator
PAFIPGJD_01450	7.18e-190	-	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PAFIPGJD_01451	1.35e-236	-	1.1.1.86	-	E	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PAFIPGJD_01452	8.5e-121	-	-	-	M	ko:K03098	-	ko00000,ko04147	Lipocalin-like domain
PAFIPGJD_01453	2.34e-207	-	-	-	S	ko:K07071	-	ko00000	Domain of unknown function (DUF1731)
PAFIPGJD_01454	5.75e-202	-	-	-	O	-	-	-	stress-induced mitochondrial fusion
PAFIPGJD_01456	9.45e-239	-	-	-	E	-	-	-	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PAFIPGJD_01458	4.24e-296	-	-	-	S	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
PAFIPGJD_01459	1.49e-237	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
PAFIPGJD_01460	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_01461	1.78e-241	-	-	-	V	-	-	-	ATPases associated with a variety of cellular activities
PAFIPGJD_01462	0.0	-	-	-	S	-	-	-	ABC-type transport system involved in multi-copper enzyme maturation permease component
PAFIPGJD_01463	4.72e-207	-	-	-	S	-	-	-	Protein of unknown function DUF58
PAFIPGJD_01464	0.0	-	-	-	S	-	-	-	Aerotolerance regulator N-terminal
PAFIPGJD_01465	0.0	-	-	-	S	-	-	-	von Willebrand factor type A domain
PAFIPGJD_01466	1.78e-293	-	-	-	-	-	-	-	-
PAFIPGJD_01467	2e-259	-	4.1.2.48	-	E	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Beta-eliminating lyase
PAFIPGJD_01468	6.71e-90	-	-	-	K	-	-	-	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
PAFIPGJD_01469	1.02e-282	-	-	-	C	-	-	-	Aldo/keto reductase family
PAFIPGJD_01470	0.0	-	-	-	KLT	-	-	-	Protein tyrosine kinase
PAFIPGJD_01471	6e-142	-	-	-	K	ko:K03088	-	ko00000,ko03021	DNA-templated transcription, initiation
PAFIPGJD_01472	7.19e-197	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PAFIPGJD_01474	6.41e-236	-	2.7.11.1	-	T	ko:K08884,ko:K12132,ko:K20333	ko02024,map02024	ko00000,ko00001,ko01000,ko01001	PFAM Formylglycine-generating sulfatase enzyme
PAFIPGJD_01475	1.11e-262	-	2.7.13.3	-	T	ko:K07646	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Osmosensitive K+ channel His kinase sensor domain
PAFIPGJD_01476	2.54e-132	kdpC	3.6.3.12	-	P	ko:K01548	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PAFIPGJD_01477	0.0	kdpB	3.6.3.12	-	P	ko:K01547	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PAFIPGJD_01478	0.0	kdpA	3.6.3.12	-	P	ko:K01546	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PAFIPGJD_01480	0.0	-	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	DNA Topoisomerase IV
PAFIPGJD_01481	1.83e-74	-	-	-	-	-	-	-	-
PAFIPGJD_01484	4.02e-188	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAFIPGJD_01485	1.93e-313	-	-	-	G	-	-	-	cellulose 1,4-beta-cellobiosidase activity
PAFIPGJD_01486	1.52e-81	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
PAFIPGJD_01488	0.0	-	-	-	P	-	-	-	Domain of unknown function
PAFIPGJD_01489	1.7e-297	-	-	-	S	-	-	-	AI-2E family transporter
PAFIPGJD_01490	0.0	rseP	3.4.21.116	-	M	ko:K06399,ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	metalloendopeptidase activity
PAFIPGJD_01491	2.11e-89	-	-	-	-	-	-	-	-
PAFIPGJD_01492	6.45e-268	-	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Porphyromonas-type peptidyl-arginine deiminase
PAFIPGJD_01493	0.0	-	-	-	H	ko:K07137	-	ko00000	5-formyltetrahydrofolate cyclo-ligase activity
PAFIPGJD_01495	3.73e-90	-	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	AIR carboxylase
PAFIPGJD_01496	1.15e-122	-	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Phosphoribosyl transferase domain
PAFIPGJD_01497	1.55e-222	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
PAFIPGJD_01498	1.37e-306	-	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Dihydro-orotase-like
PAFIPGJD_01499	2.51e-167	-	-	-	S	-	-	-	Uncharacterised protein family UPF0066
PAFIPGJD_01500	1.02e-94	-	-	-	K	-	-	-	DNA-binding transcription factor activity
PAFIPGJD_01501	5.77e-291	mtrC	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAFIPGJD_01502	0.0	-	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAFIPGJD_01503	1.57e-284	-	-	-	V	-	-	-	Beta-lactamase
PAFIPGJD_01504	8.19e-316	-	-	-	MU	-	-	-	Outer membrane efflux protein
PAFIPGJD_01505	2.69e-310	-	-	-	V	-	-	-	MacB-like periplasmic core domain
PAFIPGJD_01506	2.12e-162	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAFIPGJD_01507	4.6e-283	-	-	-	M	ko:K02005	-	ko00000	HlyD family secretion protein
PAFIPGJD_01509	2.34e-97	nudI	3.6.1.55	-	F	ko:K03574,ko:K12944	-	ko00000,ko01000,ko03400	GDP-mannose mannosyl hydrolase activity
PAFIPGJD_01510	1.79e-122	-	-	-	S	ko:K07095	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
PAFIPGJD_01511	2.86e-245	sun	2.1.1.176, 2.1.1.178	-	J	ko:K03500,ko:K11392	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PAFIPGJD_01512	5.9e-232	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PAFIPGJD_01513	1.46e-118	-	-	-	T	-	-	-	Prokaryotic dksA/traR C4-type zinc finger
PAFIPGJD_01514	5.67e-33	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L33
PAFIPGJD_01515	4.52e-49	-	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S18
PAFIPGJD_01516	3.84e-189	folE2	3.5.4.16	-	S	ko:K09007	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Type I GTP cyclohydrolase folE2
PAFIPGJD_01517	5.87e-178	-	-	-	S	-	-	-	Cytochrome C assembly protein
PAFIPGJD_01518	1.7e-237	hemA	1.2.1.70	-	H	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Glutamyl-tRNAGlu reductase, N-terminal domain
PAFIPGJD_01519	3.43e-234	-	2.5.1.61	-	H	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Porphobilinogen deaminase, dipyromethane cofactor binding domain
PAFIPGJD_01520	8.67e-85	-	-	-	S	-	-	-	Protein of unknown function, DUF488
PAFIPGJD_01521	0.0	-	-	-	M	ko:K02847,ko:K13009,ko:K16705	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005,ko02000	-O-antigen
PAFIPGJD_01522	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PAFIPGJD_01523	1.04e-54	thiS	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	thiamine diphosphate biosynthetic process
PAFIPGJD_01534	7.88e-98	-	-	-	D	-	-	-	Filamentation induced by cAMP protein fic
PAFIPGJD_01536	4.01e-71	-	-	-	S	-	-	-	Phage terminase large subunit (GpA)
PAFIPGJD_01541	2.62e-21	-	-	-	OU	-	-	-	Serine dehydrogenase proteinase
PAFIPGJD_01560	2.05e-125	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Exonuclease
PAFIPGJD_01561	1.14e-175	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAFIPGJD_01562	0.0	-	-	-	CO	-	-	-	Disulphide bond corrector protein DsbC
PAFIPGJD_01563	1.86e-94	-	-	-	O	-	-	-	OsmC-like protein
PAFIPGJD_01565	3.42e-111	-	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	Cytidine and deoxycytidylate deaminase zinc-binding region
PAFIPGJD_01566	0.0	-	-	-	EGIP	-	-	-	Phosphate acyltransferases
PAFIPGJD_01568	2.52e-205	-	1.3.1.12	-	E	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydrogenase
PAFIPGJD_01569	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	TonB dependent receptor
PAFIPGJD_01570	4.97e-168	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAFIPGJD_01571	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PAFIPGJD_01573	3.07e-155	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	Chloramphenicol acetyltransferase
PAFIPGJD_01574	2.05e-229	-	-	-	EP	ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
PAFIPGJD_01575	0.0	der	-	-	S	ko:K03977	-	ko00000,ko03009	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
PAFIPGJD_01576	9.67e-251	-	-	-	S	ko:K07091	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Predicted permease YjgP/YjgQ family
PAFIPGJD_01577	2.31e-127	-	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Recombination protein O N terminal
PAFIPGJD_01578	3.99e-183	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAFIPGJD_01579	0.0	dxs	2.2.1.7	-	HI	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAFIPGJD_01580	3.08e-52	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease VII activity
PAFIPGJD_01581	0.0	-	-	-	O	-	-	-	C-terminal four TMM region of protein-O-mannosyltransferase
PAFIPGJD_01582	0.0	-	-	-	T	-	-	-	Bacterial regulatory protein, Fis family
PAFIPGJD_01583	1.82e-274	-	-	-	T	-	-	-	PAS domain
PAFIPGJD_01584	3.37e-97	-	-	-	S	ko:K07107	-	ko00000,ko01000	Thioesterase superfamily
PAFIPGJD_01585	0.0	gpmI	5.4.2.12	-	G	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	BPG-independent PGAM N-terminus (iPGM_N)
PAFIPGJD_01586	4.16e-85	-	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S12/S23
PAFIPGJD_01587	2.91e-104	-	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S7p/S5e
PAFIPGJD_01588	0.0	-	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAFIPGJD_01589	3.67e-65	-	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S10p/S20e
PAFIPGJD_01590	3.86e-149	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAFIPGJD_01591	1.9e-131	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L4/L1 family
PAFIPGJD_01592	8.72e-58	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAFIPGJD_01593	1.85e-203	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAFIPGJD_01594	1.05e-58	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAFIPGJD_01595	4.05e-152	-	-	-	-	-	-	-	-
PAFIPGJD_01596	4.97e-70	-	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome
PAFIPGJD_01597	5.2e-156	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAFIPGJD_01598	3.42e-97	-	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAFIPGJD_01599	2.36e-34	-	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L29 protein
PAFIPGJD_01600	2.19e-56	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAFIPGJD_01601	6.79e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAFIPGJD_01602	6.2e-203	-	-	-	-	-	-	-	-
PAFIPGJD_01603	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAFIPGJD_01604	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Domain of unknown function (DUF4982)
PAFIPGJD_01605	3.33e-254	-	5.2.1.8	-	O	ko:K03771	-	ko00000,ko01000,ko03110	SurA N-terminal domain
PAFIPGJD_01606	3.02e-170	-	2.5.1.39	-	H	ko:K03179	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
PAFIPGJD_01607	1.67e-141	-	-	-	U	ko:K03561	-	ko00000,ko02000	MotA/TolQ/ExbB proton channel family
PAFIPGJD_01613	1.9e-62	-	-	-	L	-	-	-	bacterial (prokaryotic) histone like domain
PAFIPGJD_01614	1.71e-207	-	3.1.26.4	-	L	ko:K03471	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HII
PAFIPGJD_01615	5.96e-127	-	-	-	M	ko:K03642	-	ko00000	Lytic transglycolase
PAFIPGJD_01616	4.32e-174	-	-	-	F	-	-	-	NUDIX domain
PAFIPGJD_01617	1.42e-149	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Putative methyltransferase
PAFIPGJD_01618	1.39e-282	tgt	2.4.2.29	-	J	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PAFIPGJD_01619	5.64e-66	-	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit
PAFIPGJD_01620	6.5e-186	-	-	-	DTZ	-	-	-	EF-hand, calcium binding motif
PAFIPGJD_01621	1.31e-214	-	-	-	L	ko:K03733	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
PAFIPGJD_01622	1.46e-07	-	-	-	E	-	-	-	LysE type translocator
PAFIPGJD_01624	9.56e-51	-	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Ribosomal protein S16
PAFIPGJD_01625	1.55e-128	aroK	2.7.1.71	-	E	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PAFIPGJD_01626	6.97e-241	-	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PAFIPGJD_01627	1.16e-78	-	-	-	FG	ko:K02503	-	ko00000,ko04147	HIT domain
PAFIPGJD_01628	4.98e-117	-	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
PAFIPGJD_01629	2.73e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PAFIPGJD_01630	1.22e-246	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PAFIPGJD_01631	0.0	-	-	-	S	ko:K07037	-	ko00000	7TM receptor with intracellular HD hydrolase
PAFIPGJD_01632	3.35e-116	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAFIPGJD_01637	0.0	-	-	-	CO	-	-	-	Thioredoxin-like
PAFIPGJD_01639	3.8e-80	-	-	-	S	-	-	-	Bacteriophage head to tail connecting protein
PAFIPGJD_01643	6.03e-292	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
PAFIPGJD_01644	2.07e-195	-	-	-	KT	-	-	-	Peptidase S24-like
PAFIPGJD_01646	2.66e-140	-	-	-	M	-	-	-	polygalacturonase activity
PAFIPGJD_01647	1.39e-301	-	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase class I and II
PAFIPGJD_01648	3.45e-239	-	1.2.7.3	-	-	ko:K00176,ko:K07138	ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200	br01601,ko00000,ko00001,ko00002,ko01000	-
PAFIPGJD_01649	1.3e-205	-	-	-	S	-	-	-	Aldo/keto reductase family
PAFIPGJD_01650	2.97e-268	-	-	-	S	ko:K06889	-	ko00000	X-Pro dipeptidyl-peptidase (S15 family)
PAFIPGJD_01651	4.24e-270	-	-	-	C	-	-	-	Aldo/keto reductase family
PAFIPGJD_01652	8.47e-264	-	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase
PAFIPGJD_01653	9.98e-129	-	-	-	C	-	-	-	FMN binding
PAFIPGJD_01654	7.2e-103	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
PAFIPGJD_01655	1.11e-188	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Cupin domain
PAFIPGJD_01656	4.8e-128	-	-	-	S	-	-	-	Flavodoxin-like fold
PAFIPGJD_01657	7.97e-113	-	-	-	K	ko:K13640	-	ko00000,ko03000	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
PAFIPGJD_01658	1.65e-102	-	-	-	G	-	-	-	single-species biofilm formation
PAFIPGJD_01659	0.0	-	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
PAFIPGJD_01660	0.0	-	-	-	V	-	-	-	Polysaccharide biosynthesis C-terminal domain
PAFIPGJD_01662	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 20, domain 2
PAFIPGJD_01663	1.11e-239	-	4.2.1.113	-	M	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Mandelate Racemase Muconate Lactonizing
PAFIPGJD_01664	3.06e-216	-	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	RmlD substrate binding domain
PAFIPGJD_01665	0.0	-	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	RNA cap guanine-N2 methyltransferase
PAFIPGJD_01666	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_01667	4.7e-57	-	-	-	S	ko:K06960	-	ko00000	KH domain
PAFIPGJD_01668	6.71e-285	-	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	S-adenosylmethionine-dependent methyltransferase
PAFIPGJD_01669	2.45e-216	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAFIPGJD_01672	1.39e-128	-	-	-	U	ko:K05595	-	ko00000,ko02000	MarC family integral membrane protein
PAFIPGJD_01673	5.94e-178	-	4.2.99.20	-	I	ko:K08680	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Alpha/beta hydrolase family
PAFIPGJD_01674	1.46e-75	-	-	-	S	ko:K09954	-	ko00000	Putative quorum-sensing-regulated virulence factor
PAFIPGJD_01676	1.24e-51	-	-	-	-	-	-	-	-
PAFIPGJD_01677	8.46e-133	-	-	-	S	-	-	-	Protein of unknown function (DUF2589)
PAFIPGJD_01678	1.96e-184	-	-	-	-	-	-	-	-
PAFIPGJD_01679	2.59e-174	-	-	-	S	-	-	-	Protein of unknown function (DUF2589)
PAFIPGJD_01680	1.88e-111	-	-	-	KT	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	phosphorelay signal transduction system
PAFIPGJD_01681	1.17e-304	-	-	-	C	-	-	-	4 iron, 4 sulfur cluster binding
PAFIPGJD_01682	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
PAFIPGJD_01683	1.05e-219	-	-	-	K	-	-	-	Transcriptional regulator
PAFIPGJD_01684	6.03e-178	-	-	-	C	-	-	-	aldo keto reductase
PAFIPGJD_01685	8.36e-186	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PAFIPGJD_01686	2.9e-275	-	-	-	S	ko:K06889	-	ko00000	X-Pro dipeptidyl-peptidase (S15 family)
PAFIPGJD_01687	2.77e-308	-	-	-	C	-	-	-	Carboxymuconolactone decarboxylase family
PAFIPGJD_01688	2.29e-157	-	-	-	IQ	-	-	-	Short chain dehydrogenase
PAFIPGJD_01689	1.55e-24	corC_1	-	-	P	ko:K03699	-	ko00000,ko02042	Transporter associated domain
PAFIPGJD_01691	4.21e-137	-	-	-	J	ko:K05808	-	ko00000,ko03009	Sigma 54 modulation/S30EA ribosomal protein C terminus
PAFIPGJD_01693	2.98e-08	-	-	-	M	-	-	-	major outer membrane lipoprotein
PAFIPGJD_01694	0.0	-	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
PAFIPGJD_01696	2.07e-169	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	KR domain
PAFIPGJD_01697	7.5e-306	-	-	-	C	-	-	-	Sulfatase-modifying factor enzyme 1
PAFIPGJD_01698	1.43e-11	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAFIPGJD_01700	0.000576	-	-	-	-	-	-	-	-
PAFIPGJD_01702	7.45e-49	XK27_09985	-	-	S	-	-	-	Protein of unknown function (DUF1232)
PAFIPGJD_01703	1.43e-194	-	-	-	S	ko:K07051	-	ko00000	TatD related DNase
PAFIPGJD_01704	8.94e-56	-	-	-	-	-	-	-	-
PAFIPGJD_01705	4.83e-163	-	-	-	-	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002	-
PAFIPGJD_01706	0.0	-	1.3.5.1, 1.3.5.4	-	C	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	Fumarate reductase flavoprotein C-term
PAFIPGJD_01707	4.84e-30	-	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	2Fe-2S iron-sulfur cluster binding domain
PAFIPGJD_01708	4.4e-176	-	-	-	C	-	-	-	Cytochrome c
PAFIPGJD_01710	1.38e-60	-	-	-	E	ko:K07032	-	ko00000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAFIPGJD_01711	1.13e-270	-	-	-	S	-	-	-	Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units
PAFIPGJD_01712	6.74e-307	-	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	Isocitrate/isopropylmalate dehydrogenase
PAFIPGJD_01713	1.05e-160	-	-	-	S	-	-	-	Protein of unknown function (DUF4230)
PAFIPGJD_01714	2.48e-62	-	-	-	S	-	-	-	Protein of unknown function (DUF1232)
PAFIPGJD_01715	0.0	-	-	-	J	-	-	-	Beta-Casp domain
PAFIPGJD_01716	4.02e-144	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAFIPGJD_01717	1.02e-159	queC	6.3.4.20	-	F	ko:K06920	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Queuosine biosynthesis protein QueC
PAFIPGJD_01718	1.78e-97	queF	1.7.1.13	-	S	ko:K09457	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	QueF-like protein
PAFIPGJD_01719	0.0	kefA	-	-	M	ko:K05802,ko:K22051	-	ko00000,ko02000	cellular water homeostasis
PAFIPGJD_01720	0.0	gltX	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAFIPGJD_01721	7.46e-238	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PAFIPGJD_01722	4.82e-190	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Bacitracin resistance protein BacA
PAFIPGJD_01725	1.05e-84	-	-	-	S	ko:K06940	-	ko00000	Putative zinc- or iron-chelating domain
PAFIPGJD_01726	4.68e-315	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PAFIPGJD_01727	1.65e-303	-	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
PAFIPGJD_01728	1.33e-52	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAFIPGJD_01729	4.17e-260	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PAFIPGJD_01731	8.29e-100	cysJ	1.8.1.2	-	C	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	hydroxylamine reductase activity
PAFIPGJD_01733	5.74e-200	lpxG	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase
PAFIPGJD_01734	1.06e-169	BT0174	-	-	C	ko:K04488	-	ko00000	iron-sulfur transferase activity
PAFIPGJD_01735	2.08e-240	BT0173	-	-	S	-	-	-	Psort location Cytoplasmic, score
PAFIPGJD_01737	7.78e-269	-	2.1.1.72	-	H	ko:K07318	-	ko00000,ko01000,ko02048	PFAM D12 class N6 adenine-specific DNA methyltransferase
PAFIPGJD_01738	6.72e-210	-	-	-	L	ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
PAFIPGJD_01743	3.48e-274	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Iron-containing alcohol dehydrogenase
PAFIPGJD_01744	6.02e-78	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAFIPGJD_01745	2.49e-229	-	-	-	G	-	-	-	pfkB family carbohydrate kinase
PAFIPGJD_01746	0.0	fabZ	3.5.1.108, 4.2.1.59	-	IM	ko:K16363	ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01005	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
PAFIPGJD_01747	4.66e-230	-	2.7.7.13	-	JM	ko:K00966	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
PAFIPGJD_01748	4.47e-176	-	-	-	S	-	-	-	Phosphodiester glycosidase
PAFIPGJD_01749	0.0	-	-	GT2	M	ko:K03820	-	ko00000,ko01000	Carbon-nitrogen hydrolase
PAFIPGJD_01750	1.33e-51	-	-	-	C	-	-	-	4Fe-4S single cluster domain of Ferredoxin I
PAFIPGJD_01751	1.12e-103	-	-	-	S	-	-	-	Protein of unknown function (DUF721)
PAFIPGJD_01752	0.0	-	-	-	G	-	-	-	beta-N-acetylhexosaminidase activity
PAFIPGJD_01753	2.52e-237	-	-	-	S	-	-	-	Acyltransferase family
PAFIPGJD_01754	0.0	-	-	-	O	-	-	-	Cytochrome C assembly protein
PAFIPGJD_01755	2.69e-185	ccs1	-	-	O	ko:K07399	-	ko00000	cytochrome c biogenesis protein
PAFIPGJD_01756	2.42e-209	fatB	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	iron ion transport
PAFIPGJD_01757	1.06e-180	yclP	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAFIPGJD_01758	1.23e-228	fatC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	iron ion homeostasis
PAFIPGJD_01759	4.39e-219	yclN	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	iron ion homeostasis
PAFIPGJD_01760	2.43e-264	-	-	-	J	-	-	-	Endoribonuclease L-PSP
PAFIPGJD_01761	0.0	-	-	-	C	-	-	-	Di-haem oxidoreductase, putative peroxidase
PAFIPGJD_01762	7.56e-246	-	-	-	S	-	-	-	Imelysin
PAFIPGJD_01763	6.48e-142	-	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
PAFIPGJD_01765	1.82e-125	-	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Phosphoribosyl transferase domain
PAFIPGJD_01766	0.0	-	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	Helix-hairpin-helix class 2 (Pol1 family) motifs
PAFIPGJD_01767	1.37e-249	-	-	-	M	-	-	-	HlyD family secretion protein
PAFIPGJD_01768	1.78e-102	MA20_05485	-	-	S	-	-	-	Putative bacterial sensory transduction regulator
PAFIPGJD_01769	0.0	-	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Adenylosuccinate lyase C-terminus
PAFIPGJD_01770	1.46e-302	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PAFIPGJD_01773	2.16e-21	traC	-	-	P	-	-	-	DNA integration
PAFIPGJD_01774	1.52e-40	xerD1	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
PAFIPGJD_01776	2.38e-133	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	nUDIX hydrolase
PAFIPGJD_01777	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAFIPGJD_01778	1.09e-223	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PAFIPGJD_01779	1.01e-182	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAFIPGJD_01780	0.0	-	-	-	N	-	-	-	ABC-type uncharacterized transport system
PAFIPGJD_01781	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4340)
PAFIPGJD_01782	1.91e-191	-	-	-	S	-	-	-	NIF3 (NGG1p interacting factor 3)
PAFIPGJD_01783	2.15e-236	-	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PAFIPGJD_01784	9.77e-278	-	4.2.1.51, 5.4.99.5	-	E	ko:K14170	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Chorismate mutase type II
PAFIPGJD_01785	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PAFIPGJD_01786	0.0	-	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAFIPGJD_01787	1.08e-140	-	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	CDP-alcohol phosphatidyltransferase
PAFIPGJD_01789	6.73e-286	-	3.6.4.13	-	L	ko:K11927	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	helicase superfamily c-terminal domain
PAFIPGJD_01791	0.0	-	-	-	S	-	-	-	inositol 2-dehydrogenase activity
PAFIPGJD_01792	1.16e-287	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
PAFIPGJD_01793	4.27e-225	-	3.4.11.10, 3.4.11.6	-	DZ	ko:K19701	-	ko00000,ko01000,ko01002	aminopeptidase activity
PAFIPGJD_01794	5.48e-273	ycaD	-	-	EGP	ko:K08219	-	ko00000,ko02000	Major facilitator Superfamily
PAFIPGJD_01795	5.69e-312	-	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	Sigma-54 factor, Activator interacting domain (AID)
PAFIPGJD_01796	9.46e-176	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAFIPGJD_01797	4.17e-190	-	-	-	S	-	-	-	Phenazine biosynthesis-like protein
PAFIPGJD_01799	1.03e-138	mntP	-	-	P	-	-	-	manganese ion transmembrane transporter activity
PAFIPGJD_01800	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_01801	5.87e-296	-	-	-	-	-	-	-	-
PAFIPGJD_01802	0.0	-	-	-	L	ko:K07478	-	ko00000	MgsA AAA+ ATPase C terminal
PAFIPGJD_01804	1.01e-222	-	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	NmrA-like family
PAFIPGJD_01805	8.25e-273	-	-	-	S	-	-	-	Phosphotransferase enzyme family
PAFIPGJD_01806	2.27e-215	-	-	-	JM	-	-	-	Nucleotidyl transferase
PAFIPGJD_01808	2.04e-158	-	-	-	S	-	-	-	Peptidase family M50
PAFIPGJD_01809	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Prolyl-tRNA synthetase, C-terminal
PAFIPGJD_01812	2.79e-114	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
PAFIPGJD_01813	0.0	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
PAFIPGJD_01814	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
PAFIPGJD_01815	8.6e-222	-	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Glutaminase
PAFIPGJD_01816	2.43e-95	-	-	-	K	-	-	-	-acetyltransferase
PAFIPGJD_01817	1.37e-306	-	-	-	E	ko:K03310	-	ko00000	Sodium:alanine symporter family
PAFIPGJD_01819	3.95e-252	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAFIPGJD_01820	1.3e-210	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAFIPGJD_01821	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAFIPGJD_01822	7.53e-201	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PAFIPGJD_01826	4.33e-161	menG	2.1.1.163, 2.1.1.201	-	Q	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	ubiE/COQ5 methyltransferase family
PAFIPGJD_01827	0.0	-	-	-	V	-	-	-	MatE
PAFIPGJD_01833	4.88e-265	-	-	GT4	M	ko:K16703	-	ko00000,ko01000,ko01003	transferase activity, transferring glycosyl groups
PAFIPGJD_01834	1.89e-255	-	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PAFIPGJD_01835	2.84e-286	-	-	-	S	-	-	-	Phosphotransferase enzyme family
PAFIPGJD_01836	3.23e-253	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAFIPGJD_01838	7.86e-138	-	-	-	T	-	-	-	histone H2A K63-linked ubiquitination
PAFIPGJD_01839	1.56e-127	-	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAFIPGJD_01840	5.11e-222	-	-	-	G	-	-	-	Glycosyl hydrolases family 16
PAFIPGJD_01841	3.48e-213	-	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
PAFIPGJD_01842	0.0	-	-	-	T	ko:K06207	-	ko00000	Elongation factor G C-terminus
PAFIPGJD_01843	7.64e-235	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
PAFIPGJD_01844	2.39e-314	-	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
PAFIPGJD_01845	6.62e-257	-	-	-	S	ko:K11744	-	ko00000	AI-2E family transporter
PAFIPGJD_01846	3.28e-155	gph	3.1.3.18, 3.6.1.1	-	S	ko:K01091,ko:K06019	ko00190,ko00630,ko01100,ko01110,ko01130,map00190,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	glycolate biosynthetic process
PAFIPGJD_01847	3.27e-294	-	-	-	E	-	-	-	Amino acid permease
PAFIPGJD_01848	4.07e-173	-	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Thiazole biosynthesis protein ThiG
PAFIPGJD_01850	3.28e-49	-	-	-	S	-	-	-	SigmaW regulon antibacterial
PAFIPGJD_01851	1.32e-119	-	-	-	S	-	-	-	SigmaW regulon antibacterial
PAFIPGJD_01852	1.93e-242	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PAFIPGJD_01854	0.0	-	-	-	P	ko:K03455	-	ko00000	TrkA-N domain
PAFIPGJD_01855	0.0	-	-	-	P	-	-	-	Dimerisation domain of Zinc Transporter
PAFIPGJD_01856	1.67e-172	-	-	-	K	-	-	-	Transcriptional regulator
PAFIPGJD_01857	0.0	-	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PAFIPGJD_01858	6.66e-167	-	4.3.99.3	-	O	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PAFIPGJD_01859	2.2e-173	-	2.7.13.3	-	Q	ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Transposase
PAFIPGJD_01860	0.0	-	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PAFIPGJD_01861	2.56e-312	-	-	-	S	-	-	-	Protein of unknown function (DUF1015)
PAFIPGJD_01862	6.99e-238	-	-	-	E	-	-	-	Aminotransferase class-V
PAFIPGJD_01863	5.45e-234	-	-	-	S	-	-	-	Conserved hypothetical protein 698
PAFIPGJD_01864	1.12e-214	-	-	-	K	-	-	-	LysR substrate binding domain
PAFIPGJD_01867	4.87e-288	-	3.2.1.23	-	M	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PAFIPGJD_01868	1.72e-294	-	3.2.1.23	-	M	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PAFIPGJD_01869	0.0	-	-	-	I	-	-	-	PFAM Prenyltransferase squalene oxidase
PAFIPGJD_01870	8.42e-302	-	4.2.1.129, 5.4.99.17, 5.5.1.16	-	I	ko:K06045,ko:K17811	ko00909,ko01110,map00909,map01110	ko00000,ko00001,ko01000	PFAM Prenyltransferase squalene oxidase
PAFIPGJD_01871	9.82e-262	-	-	-	M	ko:K02022	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAFIPGJD_01872	1.1e-160	-	-	-	S	-	-	-	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PAFIPGJD_01874	5.12e-71	-	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin-like domain
PAFIPGJD_01875	5.48e-296	-	-	-	-	-	-	-	-
PAFIPGJD_01876	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class II (D, K and N)
PAFIPGJD_01878	9.44e-159	-	-	-	-	-	-	-	-
PAFIPGJD_01879	0.0	-	-	-	P	-	-	-	PA14 domain
PAFIPGJD_01880	3.87e-80	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAFIPGJD_01881	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAFIPGJD_01882	6.75e-29	-	-	-	I	-	-	-	PFAM biotin lipoyl attachment domain-containing protein
PAFIPGJD_01883	0.0	-	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	Na+-transporting oxaloacetate decarboxylase beta subunit
PAFIPGJD_01884	9.48e-192	-	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Biotin/lipoate A/B protein ligase family
PAFIPGJD_01885	0.0	-	-	-	C	-	-	-	Acetyl-CoA hydrolase/transferase C-terminal domain
PAFIPGJD_01887	9.14e-204	-	2.7.7.24	-	M	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PAFIPGJD_01888	7.56e-271	-	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Male sterility protein
PAFIPGJD_01889	1.13e-228	-	2.7.1.11	-	G	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Phosphofructokinase
PAFIPGJD_01890	9.11e-182	-	-	-	L	ko:K10800	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	uracil-dna glycosylase
PAFIPGJD_01891	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAFIPGJD_01892	0.0	poxB	1.2.3.3, 1.2.5.1	-	EH	ko:K00156,ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Thiamine pyrophosphate enzyme, central domain
PAFIPGJD_01895	0.0	-	-	-	G	-	-	-	alpha-galactosidase
PAFIPGJD_01897	0.0	-	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
PAFIPGJD_01898	2.76e-267	mtrC	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAFIPGJD_01899	0.0	-	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAFIPGJD_01900	0.0	-	-	-	P	ko:K14445	-	ko00000,ko02000	Citrate transporter
PAFIPGJD_01902	1.23e-177	-	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PAFIPGJD_01904	7.23e-164	-	-	-	S	-	-	-	PFAM Sel1 domain protein repeat-containing protein
PAFIPGJD_01907	0.0	-	-	-	L	-	-	-	DNA restriction-modification system
PAFIPGJD_01911	3.92e-115	-	-	-	-	-	-	-	-
PAFIPGJD_01912	1.62e-184	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PAFIPGJD_01914	2.31e-162	-	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAFIPGJD_01915	1.68e-257	tdh	1.1.1.103	-	E	ko:K00060	ko00260,map00260	ko00000,ko00001,ko01000	Alcohol dehydrogenase GroES-like domain
PAFIPGJD_01916	0.0	-	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Carbohydrate phosphorylase
PAFIPGJD_01917	8.34e-180	-	-	-	P	ko:K10716	-	ko00000,ko02000	domain protein
PAFIPGJD_01918	1.55e-83	-	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	ArsC family
PAFIPGJD_01919	0.0	-	-	-	J	ko:K07576	-	ko00000	Beta-Casp domain
PAFIPGJD_01920	8.48e-56	tatA	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PAFIPGJD_01921	3.94e-243	-	-	-	S	-	-	-	PFAM Sel1 domain protein repeat-containing protein
PAFIPGJD_01922	1.21e-238	-	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	RNA pseudouridylate synthase
PAFIPGJD_01923	2.05e-28	-	-	-	-	-	-	-	-
PAFIPGJD_01924	8.07e-174	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	tRNA (Guanine-1)-methyltransferase
PAFIPGJD_01925	8.8e-239	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAFIPGJD_01926	1.66e-87	-	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
PAFIPGJD_01927	0.0	-	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
PAFIPGJD_01928	1.26e-136	-	-	-	C	-	-	-	Nitroreductase family
PAFIPGJD_01929	1.23e-110	-	-	-	S	-	-	-	Acetyltransferase (GNAT) family
PAFIPGJD_01932	6.51e-19	-	-	-	S	-	-	-	Phage Tail Collar Domain
PAFIPGJD_01945	1.05e-19	-	-	-	OU	-	-	-	Belongs to the peptidase S14 family
PAFIPGJD_01948	2.05e-42	-	-	-	S	-	-	-	Phage terminase large subunit (GpA)
PAFIPGJD_01950	5e-252	-	2.3.1.1	-	E	ko:K14682	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Acetyltransferase (GNAT) family
PAFIPGJD_01951	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAFIPGJD_01952	0.0	-	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAFIPGJD_01954	7.06e-172	-	6.3.5.11, 6.3.5.9	-	V	ko:K02224,ko:K18554	ko00860,ko01100,ko01120,map00860,map01100,map01120	br01600,ko00000,ko00001,ko01000,ko01504	Chloramphenicol phosphotransferase-like protein
PAFIPGJD_01955	1.12e-83	-	-	-	K	ko:K07343	-	ko00000	positive regulation of type IV pilus biogenesis
PAFIPGJD_01956	5.44e-232	-	-	-	CO	-	-	-	Redoxin
PAFIPGJD_01957	1.73e-123	paiA	-	-	K	-	-	-	acetyltransferase
PAFIPGJD_01958	1.87e-215	-	-	-	K	-	-	-	Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
PAFIPGJD_01960	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl tRNA synthetase N terminal dom
PAFIPGJD_01962	0.0	-	3.4.24.70	-	E	ko:K01414	-	ko00000,ko01000,ko01002	Peptidase family M3
PAFIPGJD_01963	0.0	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PAFIPGJD_01964	2.51e-06	-	-	-	-	-	-	-	-
PAFIPGJD_01965	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 18
PAFIPGJD_01966	0.0	-	-	-	S	ko:K07126,ko:K13582	ko04112,map04112	ko00000,ko00001	beta-lactamase activity
PAFIPGJD_01968	6.58e-276	-	6.2.1.26	-	IQ	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	AMP-binding enzyme
PAFIPGJD_01969	1.27e-70	-	-	-	K	-	-	-	ribonuclease III activity
PAFIPGJD_01970	1.55e-164	-	-	-	-	-	-	-	-
PAFIPGJD_01971	3.49e-139	nuoC	1.6.5.3	-	C	ko:K00332	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAFIPGJD_01972	3.77e-138	nuoB	1.6.5.3	-	C	ko:K00331	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAFIPGJD_01976	6.37e-24	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
PAFIPGJD_01977	6.03e-57	-	-	-	M	-	-	-	self proteolysis
PAFIPGJD_01981	5.48e-134	-	-	-	S	-	-	-	Glycosyl hydrolase 108
PAFIPGJD_01984	1.24e-200	-	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	ParB-like nuclease domain
PAFIPGJD_01985	5.07e-235	-	-	-	S	-	-	-	Peptidase family M28
PAFIPGJD_01986	0.0	-	-	-	M	-	-	-	Aerotolerance regulator N-terminal
PAFIPGJD_01987	0.0	-	-	-	S	-	-	-	Large extracellular alpha-helical protein
PAFIPGJD_01990	1.11e-235	-	-	-	S	ko:K14347	-	ko00000,ko02000,ko04147	SBF-like CPA transporter family (DUF4137)
PAFIPGJD_01991	2.64e-272	-	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	tRNA synthetases class I (W and Y)
PAFIPGJD_01993	1.74e-85	-	-	-	S	ko:K09922	-	ko00000	Putative member of DMT superfamily (DUF486)
PAFIPGJD_01994	4.4e-211	-	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
PAFIPGJD_01995	1.6e-217	-	-	-	EP	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAFIPGJD_01996	0.0	-	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PAFIPGJD_01997	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PAFIPGJD_01998	1.53e-219	-	-	-	O	-	-	-	Thioredoxin-like domain
PAFIPGJD_01999	4.57e-311	-	1.5.1.7	-	E	ko:K00290	ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Saccharopine dehydrogenase C-terminal domain
PAFIPGJD_02000	1.75e-235	-	-	-	S	ko:K01128	-	ko00000,ko01000	acid phosphatase activity
PAFIPGJD_02004	0.0	-	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Tubulin/FtsZ family, GTPase domain
PAFIPGJD_02005	3.38e-294	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PAFIPGJD_02006	1.72e-147	-	-	-	M	-	-	-	NLP P60 protein
PAFIPGJD_02007	0.0	-	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PAFIPGJD_02008	0.0	-	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	ABC transporter transmembrane region
PAFIPGJD_02009	0.0	-	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	ABC transporter transmembrane region
PAFIPGJD_02010	0.0	-	-	-	H	-	-	-	NAD synthase
PAFIPGJD_02011	7.86e-174	-	-	-	Q	ko:K02066	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Permease MlaE
PAFIPGJD_02012	4.3e-190	-	-	-	Q	ko:K02065	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAFIPGJD_02013	1.33e-231	-	-	-	Q	ko:K02067	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	MlaD protein
PAFIPGJD_02014	2.69e-38	-	-	-	T	-	-	-	ribosome binding
PAFIPGJD_02017	5.1e-265	-	-	-	NU	ko:K02669	-	ko00000,ko02035,ko02044	Type II/IV secretion system protein
PAFIPGJD_02018	9.11e-261	-	-	-	NU	ko:K02669	-	ko00000,ko02035,ko02044	Type II/IV secretion system protein
PAFIPGJD_02019	2.88e-249	ppiD	5.2.1.8	-	O	ko:K03769,ko:K03770,ko:K03771,ko:K07533	-	ko00000,ko01000,ko03110	peptidyl-prolyl cis-trans isomerase activity
PAFIPGJD_02021	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_02022	2.4e-180	kdsB	2.7.7.38	-	M	ko:K00979	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PAFIPGJD_02023	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAFIPGJD_02024	0.0	-	-	-	E	-	-	-	Sodium:solute symporter family
PAFIPGJD_02025	1.85e-30	-	-	-	-	-	-	-	-
PAFIPGJD_02031	1.9e-21	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PAFIPGJD_02032	0.0	-	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	DHHA1 domain
PAFIPGJD_02033	0.0	hyl	2.3.1.48, 3.2.1.169, 3.2.1.35	GH84	G	ko:K01197,ko:K15719	ko00531,ko01100,ko04931,map00531,map01100,map04931	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylhexosaminidase activity
PAFIPGJD_02034	4.14e-229	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Zinc-uptake complex component A periplasmic
PAFIPGJD_02035	2.47e-101	-	-	-	-	-	-	-	-
PAFIPGJD_02036	2.15e-192	-	-	-	P	ko:K09820	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PAFIPGJD_02037	6.95e-183	-	-	-	P	ko:K09819	-	ko00000,ko00002,ko02000	FecCD transport family
PAFIPGJD_02038	5.46e-126	-	-	-	S	ko:K19411	-	ko00000	UvrB/uvrC motif
PAFIPGJD_02039	2.26e-243	-	2.7.14.1	-	E	ko:K19405	-	ko00000,ko01000	ATP:guanido phosphotransferase, C-terminal catalytic domain
PAFIPGJD_02040	0.0	-	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	C-terminal, D2-small domain, of ClpB protein
PAFIPGJD_02041	0.0	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-L-fucosidase
PAFIPGJD_02042	1.93e-63	-	-	-	P	ko:K03972	-	ko00000	Rhodanese Homology Domain
PAFIPGJD_02043	2.1e-201	-	-	-	Q	-	-	-	Fumarylacetoacetate (FAA) hydrolase family
PAFIPGJD_02044	0.0	-	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	HMGL-like
PAFIPGJD_02045	1.28e-223	-	-	-	CO	-	-	-	amine dehydrogenase activity
PAFIPGJD_02046	8.39e-89	-	-	-	S	ko:K09117	-	ko00000	Yqey-like protein
PAFIPGJD_02047	2.05e-163	-	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
PAFIPGJD_02048	7.55e-206	-	-	-	GM	-	-	-	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PAFIPGJD_02049	2.41e-232	-	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	tRNA synthetases class I (W and Y)
PAFIPGJD_02050	1.56e-103	-	-	-	T	-	-	-	Universal stress protein family
PAFIPGJD_02051	1.45e-190	-	-	-	S	ko:K09769	-	ko00000	YmdB-like protein
PAFIPGJD_02052	4.13e-184	-	-	-	H	ko:K22132	-	ko00000,ko03016	ThiF family
PAFIPGJD_02053	9.9e-121	-	-	-	-	-	-	-	-
PAFIPGJD_02055	1.12e-229	-	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
PAFIPGJD_02056	3.22e-124	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
PAFIPGJD_02057	3.77e-289	kbl	2.3.1.29	-	E	ko:K00639	ko00260,map00260	ko00000,ko00001,ko01000,ko01007	Aminotransferase class I and II
PAFIPGJD_02058	0.0	-	-	-	KLT	-	-	-	Sulfatase-modifying factor enzyme 1
PAFIPGJD_02059	1.06e-182	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	AAA domain
PAFIPGJD_02060	0.0	-	-	-	S	ko:K07126	-	ko00000	beta-lactamase activity
PAFIPGJD_02069	4.78e-18	-	-	-	M	-	-	-	D-alanyl-D-alanine carboxypeptidase
PAFIPGJD_02070	4.25e-160	-	-	-	S	-	-	-	Terminase
PAFIPGJD_02072	5.03e-28	-	-	-	-	-	-	-	-
PAFIPGJD_02078	1.54e-305	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	DnaB-like helicase C terminal domain
PAFIPGJD_02090	1.04e-65	-	-	-	KT	-	-	-	Peptidase S24-like
PAFIPGJD_02092	4.93e-64	-	-	-	F	-	-	-	acetyltransferase
PAFIPGJD_02093	4.71e-33	-	-	-	M	-	-	-	lytic transglycosylase activity
PAFIPGJD_02099	3.4e-178	-	-	-	O	-	-	-	Trypsin
PAFIPGJD_02100	3.31e-239	-	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
PAFIPGJD_02101	6.2e-203	-	-	-	-	-	-	-	-
PAFIPGJD_02102	0.0	-	-	-	S	-	-	-	Sulfatase-modifying factor enzyme 1
PAFIPGJD_02103	2.74e-284	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAFIPGJD_02106	2.63e-10	-	-	-	-	-	-	-	-
PAFIPGJD_02108	8.23e-62	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAFIPGJD_02109	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PAFIPGJD_02110	2.48e-228	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
PAFIPGJD_02111	1.26e-210	-	-	-	S	-	-	-	Protein of unknown function DUF58
PAFIPGJD_02112	8.06e-134	-	-	-	-	-	-	-	-
PAFIPGJD_02113	2.3e-229	-	-	-	S	-	-	-	Protein of unknown function (DUF1194)
PAFIPGJD_02116	1.02e-203	dapA	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Dihydrodipicolinate synthetase family
PAFIPGJD_02117	4.14e-175	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Dihydrodipicolinate reductase, N-terminus
PAFIPGJD_02118	4.21e-121	-	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PAFIPGJD_02119	4.13e-183	panB	2.1.2.11	-	H	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PAFIPGJD_02120	5.03e-229	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PAFIPGJD_02121	7.29e-211	-	-	-	M	-	-	-	Peptidase family M23
PAFIPGJD_02131	3.2e-21	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PAFIPGJD_02134	7.5e-72	recT	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
PAFIPGJD_02135	4.32e-06	Z012_11975	-	-	M	-	-	-	protein involved in exopolysaccharide biosynthesis
PAFIPGJD_02136	4.52e-18	-	-	-	L	-	-	-	YqaJ-like viral recombinase domain
PAFIPGJD_02144	1.6e-23	-	-	-	EH	-	-	-	sulfate reduction
PAFIPGJD_02145	5.78e-63	-	-	-	L	-	-	-	D12 class N6 adenine-specific DNA methyltransferase
PAFIPGJD_02148	6.3e-38	-	-	-	KL	-	-	-	Belongs to the N(4) N(6)-methyltransferase family
PAFIPGJD_02149	8.93e-141	-	-	-	K	ko:K12055	-	ko00000,ko02044	chromosome segregation
PAFIPGJD_02153	2.29e-233	-	-	-	S	-	-	-	Phage terminase large subunit (GpA)
PAFIPGJD_02155	1.12e-159	-	-	-	S	-	-	-	Phage portal protein, lambda family
PAFIPGJD_02156	3.83e-96	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Clp protease
PAFIPGJD_02157	2.69e-84	-	-	-	S	-	-	-	Phage major capsid protein E
PAFIPGJD_02159	1.05e-16	-	-	-	-	-	-	-	-
PAFIPGJD_02161	4.11e-203	-	-	-	S	ko:K06907	-	ko00000	COG3497 Phage tail sheath protein FI
PAFIPGJD_02165	3.41e-58	-	-	-	D	-	-	-	phage tail tape measure protein
PAFIPGJD_02166	4.95e-18	-	-	-	S	-	-	-	Phage Tail Protein X
PAFIPGJD_02167	5.85e-62	-	-	-	S	ko:K06905	-	ko00000	COG3500 Phage protein D
PAFIPGJD_02170	1.08e-12	-	-	-	-	-	-	-	-
PAFIPGJD_02171	2.68e-56	-	-	-	S	-	-	-	Baseplate J-like protein
PAFIPGJD_02172	5.77e-40	-	-	-	S	-	-	-	Phage tail protein (Tail_P2_I)
PAFIPGJD_02173	1.5e-07	-	-	-	D	-	-	-	nuclear chromosome segregation
PAFIPGJD_02177	1.79e-122	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAFIPGJD_02178	3.09e-61	-	-	-	J	-	-	-	RF-1 domain
PAFIPGJD_02179	1.67e-123	-	-	-	-	-	-	-	-
PAFIPGJD_02180	0.0	-	2.7.7.9	-	G	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP--glucose-1-phosphate uridylyltransferase
PAFIPGJD_02181	1.84e-183	-	2.1.1.144, 2.1.1.197	-	FG	ko:K00598,ko:K02169	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	trans-aconitate 2-methyltransferase activity
PAFIPGJD_02183	1.69e-127	-	-	-	S	-	-	-	protein trimerization
PAFIPGJD_02184	2.72e-36	-	-	-	M	ko:K07271	-	ko00000,ko01000	LicD family
PAFIPGJD_02185	2.88e-63	tagD	2.7.7.39	-	H	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
PAFIPGJD_02186	1.45e-29	-	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	PFAM glycosyltransferase sugar-binding region containing DXD motif
PAFIPGJD_02187	1.14e-229	-	-	-	M	ko:K07271	-	ko00000,ko01000	LICD family
PAFIPGJD_02188	0.0	-	2.7.7.15	-	H	ko:K00968	ko00440,ko00564,ko01100,ko05231,map00440,map00564,map01100,map05231	ko00000,ko00001,ko00002,ko01000	Oxidoreductase family, NAD-binding Rossmann fold
PAFIPGJD_02189	1.5e-95	-	4.3.1.12	-	E	ko:K01750	ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230	ko00000,ko00001,ko01000	Ornithine cyclodeaminase/mu-crystallin family
PAFIPGJD_02190	0.0	cobD	2.6.1.9, 2.7.7.74, 4.1.1.81	-	M	ko:K00817,ko:K04720,ko:K07281	ko00340,ko00350,ko00360,ko00400,ko00401,ko00562,ko00860,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00562,map00860,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	nucleotidyl transferase
PAFIPGJD_02191	4.15e-262	-	-	-	M	ko:K07271	-	ko00000,ko01000	LICD family
PAFIPGJD_02192	0.0	-	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha amylase, C-terminal all-beta domain
PAFIPGJD_02194	1.45e-93	-	-	-	S	ko:K02426	-	ko00000	Fe-S metabolism associated domain
PAFIPGJD_02195	1.64e-223	-	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PAFIPGJD_02196	0.0	-	-	-	P	-	-	-	Sulfatase
PAFIPGJD_02197	0.0	-	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PAFIPGJD_02198	8.72e-53	-	-	-	G	ko:K11189	-	ko00000,ko02000	PTS HPr component phosphorylation site
PAFIPGJD_02199	3.12e-223	hprK	-	-	T	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr)
PAFIPGJD_02200	0.0	-	-	-	E	-	-	-	Peptidase dimerisation domain
PAFIPGJD_02201	8.83e-209	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAFIPGJD_02202	1.36e-137	-	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	5-formyltetrahydrofolate cyclo-ligase family
PAFIPGJD_02203	0.0	-	-	-	S	-	-	-	50S ribosome-binding GTPase
PAFIPGJD_02204	4.14e-163	-	-	-	S	ko:K06997	-	ko00000	Alanine racemase, N-terminal domain
PAFIPGJD_02205	1.88e-135	-	-	-	K	ko:K07735	-	ko00000,ko03000	Uncharacterized ACR, COG1678
PAFIPGJD_02206	6.07e-192	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
PAFIPGJD_02207	0.0	-	-	-	M	-	-	-	Glycosyl transferase family group 2
PAFIPGJD_02208	7.47e-203	-	-	-	-	-	-	-	-
PAFIPGJD_02209	8.46e-84	-	-	-	P	ko:K06195	-	ko00000	ApaG domain
PAFIPGJD_02210	0.0	-	-	-	L	-	-	-	SNF2 family N-terminal domain
PAFIPGJD_02211	8.26e-106	-	-	-	K	-	-	-	Lrp/AsnC ligand binding domain
PAFIPGJD_02212	1.59e-286	-	-	-	E	ko:K10907	-	ko00000,ko01000,ko01007	Cys/Met metabolism PLP-dependent enzyme
PAFIPGJD_02213	1.93e-209	-	-	-	S	-	-	-	CAAX protease self-immunity
PAFIPGJD_02214	3.7e-156	-	-	-	S	-	-	-	DUF218 domain
PAFIPGJD_02215	0.0	-	6.1.1.14	-	J	ko:K01880	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Anticodon binding domain
PAFIPGJD_02216	1.16e-205	yeaE	-	-	S	-	-	-	aldo-keto reductase (NADP) activity
PAFIPGJD_02217	0.0	-	-	-	S	-	-	-	Oxygen tolerance
PAFIPGJD_02218	8.51e-42	-	-	-	S	ko:K07114	-	ko00000,ko02000	von Willebrand factor (vWF) type A domain
PAFIPGJD_02219	0.0	-	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Carboxyl transferase domain
PAFIPGJD_02220	4.12e-100	-	5.1.99.1	-	E	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Glyoxalase-like domain
PAFIPGJD_02221	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAFIPGJD_02222	8.14e-75	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAFIPGJD_02224	0.000232	-	2.7.11.1, 2.7.11.17	-	T	ko:K08794,ko:K13412,ko:K17530	ko04626,ko04921,ko04925,ko05145,map04626,map04921,map04925,map05145	ko00000,ko00001,ko01000,ko01001	protein serine/threonine kinase activity
PAFIPGJD_02225	0.0	-	-	-	S	-	-	-	acetyltransferases and hydrolases with the alpha beta hydrolase fold
PAFIPGJD_02226	1.34e-298	-	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PAFIPGJD_02227	3.13e-114	-	-	-	P	-	-	-	Rhodanese-like domain
PAFIPGJD_02228	1.19e-152	-	-	-	S	-	-	-	Protein of unknown function (DUF1573)
PAFIPGJD_02229	1.76e-186	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	Signal peptidase (SPase) II
PAFIPGJD_02230	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAFIPGJD_02231	1e-248	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAFIPGJD_02232	9.38e-260	-	-	-	S	-	-	-	Peptidase family M28
PAFIPGJD_02233	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
PAFIPGJD_02234	5.62e-57	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAFIPGJD_02235	2.27e-90	-	-	-	S	ko:K09793	-	ko00000	Protein of unknown function (DUF456)
PAFIPGJD_02236	2.45e-205	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
PAFIPGJD_02237	0.0	-	-	-	M	ko:K09808	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	MacB-like periplasmic core domain
PAFIPGJD_02238	3.74e-208	-	-	-	S	-	-	-	RDD family
PAFIPGJD_02239	1.25e-132	-	2.3.1.129	-	M	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	ko00000,ko00001,ko00002,ko01000,ko01005	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PAFIPGJD_02240	1.4e-171	-	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD-hyrolase-like
PAFIPGJD_02241	5.99e-286	-	-	-	S	ko:K09760	-	ko00000	RmuC family
PAFIPGJD_02242	0.0	-	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Transglycosylase
PAFIPGJD_02243	1.35e-240	-	-	-	O	-	-	-	Trypsin-like peptidase domain
PAFIPGJD_02244	5.88e-277	-	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
PAFIPGJD_02246	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAFIPGJD_02247	0.0	-	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	DNA Topoisomerase IV
PAFIPGJD_02248	2.66e-147	-	-	-	C	-	-	-	lactate oxidation
PAFIPGJD_02249	1.02e-296	-	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Peptidase family U32
PAFIPGJD_02250	1e-20	-	3.5.3.1	-	E	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	ko00000,ko00001,ko00002,ko01000	COG0010 Arginase agmatinase formimionoglutamate hydrolase arginase family
PAFIPGJD_02251	0.0	-	-	-	U	-	-	-	Involved in the tonB-independent uptake of proteins
PAFIPGJD_02252	0.0	-	-	-	C	-	-	-	cytochrome C peroxidase
PAFIPGJD_02253	6.9e-282	-	-	-	J	-	-	-	PFAM Endoribonuclease L-PSP
PAFIPGJD_02255	1.33e-151	phoU	-	-	P	ko:K02039	-	ko00000	negative regulation of phosphate transmembrane transport
PAFIPGJD_02256	8.04e-184	-	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAFIPGJD_02257	0.0	-	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAFIPGJD_02258	0.0	pstC	-	-	P	ko:K02037,ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAFIPGJD_02259	1.51e-221	-	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	PBP superfamily domain
PAFIPGJD_02260	5.24e-185	-	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAFIPGJD_02261	5.19e-140	-	-	-	P	ko:K02039	-	ko00000	PhoU domain
PAFIPGJD_02262	6.15e-234	-	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
PAFIPGJD_02263	7.65e-101	-	-	-	M	ko:K06077	-	ko00000	Glycine zipper 2TM domain
PAFIPGJD_02265	0.0	-	-	-	S	ko:K07263	-	ko00000,ko01000,ko01002	Insulinase (Peptidase family M16)
PAFIPGJD_02266	4.72e-153	-	-	-	H	-	-	-	HD superfamily hydrolase involved in NAD metabolism
PAFIPGJD_02267	2.13e-230	-	-	-	L	-	-	-	Elongator protein 3, MiaB family, Radical SAM
PAFIPGJD_02268	3.03e-231	-	-	-	J	-	-	-	Belongs to the universal ribosomal protein uS2 family
PAFIPGJD_02269	2.51e-103	-	-	-	K	-	-	-	DNA-binding transcription factor activity
PAFIPGJD_02272	5.58e-289	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	NusA-like KH domain
PAFIPGJD_02273	3.73e-195	-	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease/Exonuclease/phosphatase family
PAFIPGJD_02274	1.72e-144	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAFIPGJD_02275	2.47e-134	-	-	-	J	-	-	-	Putative rRNA methylase
PAFIPGJD_02276	2.83e-204	-	-	-	S	-	-	-	Domain of unknown function (DUF362)
PAFIPGJD_02277	0.0	-	-	-	C	-	-	-	PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein
PAFIPGJD_02278	0.0	-	-	-	V	-	-	-	ABC-2 type transporter
PAFIPGJD_02280	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_02281	1.02e-184	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
PAFIPGJD_02282	7.33e-143	-	-	-	S	-	-	-	RNA recognition motif
PAFIPGJD_02283	0.0	-	-	-	M	-	-	-	Bacterial sugar transferase
PAFIPGJD_02284	8.88e-284	-	2.7.1.6	-	G	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Galactokinase galactose-binding signature
PAFIPGJD_02285	0.0	-	-	-	S	ko:K03307	-	ko00000	Sodium:solute symporter family
PAFIPGJD_02287	0.0	-	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	UvrD-like helicase C-terminal domain
PAFIPGJD_02288	3.02e-227	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAFIPGJD_02289	6.81e-273	-	-	-	M	-	-	-	Monogalactosyldiacylglycerol (MGDG) synthase
PAFIPGJD_02290	7.16e-174	coaX	2.7.1.33	-	K	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Type III pantothenate kinase
PAFIPGJD_02291	8.56e-45	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Phosphopantetheine attachment site
PAFIPGJD_02292	3.5e-132	-	-	-	-	-	-	-	-
PAFIPGJD_02293	5.19e-178	-	-	-	S	-	-	-	Lysin motif
PAFIPGJD_02294	1.07e-98	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAFIPGJD_02295	2.93e-39	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
PAFIPGJD_02297	7.66e-106	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
PAFIPGJD_02298	1.38e-205	-	-	-	M	-	-	-	self proteolysis
PAFIPGJD_02301	4.65e-16	-	-	-	M	-	-	-	PFAM YD repeat-containing protein
PAFIPGJD_02304	3.9e-306	-	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PAFIPGJD_02305	1.98e-109	msrB	1.8.4.11, 1.8.4.12	-	O	ko:K07305,ko:K12267	-	ko00000,ko01000	peptide-methionine (R)-S-oxide reductase activity
PAFIPGJD_02306	4.16e-259	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAFIPGJD_02307	9.6e-160	nupG	-	-	G	ko:K03289,ko:K03301,ko:K08218,ko:K11537	ko01501,map01501	ko00000,ko00001,ko00002,ko02000	Major facilitator Superfamily
PAFIPGJD_02314	7.57e-247	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAFIPGJD_02315	1.03e-243	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAFIPGJD_02316	1.09e-231	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAFIPGJD_02317	5.08e-91	-	-	-	M	ko:K01993	-	ko00000	HlyD family secretion protein
PAFIPGJD_02318	3.5e-90	-	-	-	M	ko:K01993	-	ko00000	HlyD family secretion protein
PAFIPGJD_02319	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAFIPGJD_02320	3.85e-194	-	2.7.8.8	-	I	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	CDP-alcohol phosphatidyltransferase
PAFIPGJD_02321	7.91e-96	-	-	-	C	-	-	-	e3 binding domain
PAFIPGJD_02322	3.93e-128	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PAFIPGJD_02323	6.2e-265	-	-	-	S	-	-	-	PFAM glycosyl transferase family 2
PAFIPGJD_02324	3.37e-292	-	-	-	-	-	-	-	-
PAFIPGJD_02325	4.88e-263	-	-	-	S	-	-	-	Glycosyltransferase like family 2
PAFIPGJD_02326	3.06e-226	-	-	-	S	-	-	-	Glycosyl transferase family 11
PAFIPGJD_02327	8.96e-274	-	-	GT2	S	ko:K19427	-	ko00000,ko01000	PFAM glycosyl transferase family 2
PAFIPGJD_02329	1.24e-282	-	-	-	H	-	-	-	PFAM glycosyl transferase family 8
PAFIPGJD_02330	0.0	-	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Polyphosphate kinase middle domain
PAFIPGJD_02331	0.0	-	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Ppx/GppA phosphatase family
PAFIPGJD_02332	8.13e-264	-	-	-	S	ko:K11941	-	ko00000,ko01000	transferase activity, transferring acyl groups other than amino-acyl groups
PAFIPGJD_02333	1.32e-129	map	3.4.11.18	-	J	ko:K01265	-	ko00000,ko01000,ko01002	Metallopeptidase family M24
PAFIPGJD_02334	6.41e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAFIPGJD_02335	0.0	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAFIPGJD_02337	6.42e-101	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
PAFIPGJD_02338	6.85e-77	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAFIPGJD_02341	6.96e-64	-	-	-	K	-	-	-	DNA-binding transcription factor activity
PAFIPGJD_02342	2.33e-143	-	-	-	-	-	-	-	-
PAFIPGJD_02344	0.0	-	-	-	S	-	-	-	Bacteriophage head to tail connecting protein
PAFIPGJD_02346	1.5e-180	-	-	-	-	-	-	-	-
PAFIPGJD_02348	1.26e-112	-	-	-	CO	-	-	-	cell redox homeostasis
PAFIPGJD_02349	6.11e-76	-	-	-	S	-	-	-	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
PAFIPGJD_02350	6.22e-74	-	-	-	S	-	-	-	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
PAFIPGJD_02351	1.3e-116	-	-	-	S	-	-	-	nitrogen fixation
PAFIPGJD_02352	1.58e-148	dedA	-	-	S	-	-	-	FtsZ-dependent cytokinesis
PAFIPGJD_02353	7.89e-268	-	2.4.1.182	GT19	M	ko:K00748	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PAFIPGJD_02354	0.0	-	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PAFIPGJD_02355	2.47e-253	-	-	-	L	-	-	-	Transposase IS200 like
PAFIPGJD_02356	2.19e-278	-	-	-	P	ko:K03281	-	ko00000	Voltage gated chloride channel
PAFIPGJD_02359	2.35e-28	-	-	-	S	-	-	-	chitin catabolic process
PAFIPGJD_02360	1.07e-10	-	-	-	K	ko:K07726	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
PAFIPGJD_02362	2.74e-06	-	-	-	-	-	-	-	-
PAFIPGJD_02370	1.01e-23	-	-	-	-	-	-	-	-
PAFIPGJD_02371	1.43e-09	-	2.1.1.37	-	H	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	C-5 cytosine-specific DNA methylase
PAFIPGJD_02373	7.09e-65	-	2.1.1.72	-	L	ko:K06223	ko03430,map03430	ko00000,ko00001,ko01000,ko02048,ko03032,ko03400	D12 class N6 adenine-specific DNA methyltransferase
PAFIPGJD_02376	1.5e-29	-	-	-	-	-	-	-	-
PAFIPGJD_02377	1.46e-84	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
PAFIPGJD_02378	2.16e-104	-	-	-	S	-	-	-	phage major tail protein, phi13 family
PAFIPGJD_02379	1.82e-13	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PAFIPGJD_02382	6.29e-38	-	3.2.1.1, 3.2.1.52, 3.5.1.28	GH13	V	ko:K01176,ko:K01207,ko:K01447,ko:K01448,ko:K02067,ko:K06385,ko:K11066	ko00500,ko00520,ko00531,ko01100,ko01501,ko01503,ko02010,ko04973,map00500,map00520,map00531,map01100,map01501,map01503,map02010,map04973	ko00000,ko00001,ko00002,ko01000,ko01011,ko02000,ko03036	N-Acetylmuramoyl-L-alanine amidase
PAFIPGJD_02383	3.91e-29	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAFIPGJD_02386	2.2e-225	-	-	-	L	-	-	-	Reverse transcriptase (RNA-dependent DNA polymerase)
PAFIPGJD_02387	1.35e-75	-	-	-	S	-	-	-	23S rRNA-intervening sequence protein
PAFIPGJD_02388	2.5e-164	-	-	-	S	-	-	-	PFAM Formylglycine-generating sulfatase enzyme
PAFIPGJD_02389	1.87e-46	-	-	-	-	-	-	-	-
PAFIPGJD_02394	9.17e-70	-	-	-	M	-	-	-	Polymer-forming cytoskeletal
PAFIPGJD_02395	2.53e-120	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAFIPGJD_02396	4.62e-165	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Amino acid kinase family
PAFIPGJD_02397	1.45e-208	-	-	-	M	-	-	-	Mechanosensitive ion channel
PAFIPGJD_02398	3.6e-152	-	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	C-terminal domain of 1-Cys peroxiredoxin
PAFIPGJD_02399	0.0	-	-	-	S	-	-	-	Sodium:neurotransmitter symporter family
PAFIPGJD_02400	0.0	-	-	-	-	-	-	-	-
PAFIPGJD_02401	2.37e-46	-	-	-	J	-	-	-	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAFIPGJD_02402	1.06e-75	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAFIPGJD_02403	2.15e-183	-	-	-	I	-	-	-	Acyl-ACP thioesterase
PAFIPGJD_02404	1.72e-230	-	4.1.1.35	-	M	ko:K08678	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko00002,ko01000	3-beta hydroxysteroid dehydrogenase/isomerase family
PAFIPGJD_02405	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PAFIPGJD_02406	2.04e-160	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PAFIPGJD_02408	4.89e-237	-	4.2.1.24	-	H	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko04147	Delta-aminolevulinic acid dehydratase
PAFIPGJD_02411	0.0	-	-	-	T	-	-	-	5TM C-terminal transporter carbon starvation CstA
PAFIPGJD_02412	0.0	-	-	-	EGIP	-	-	-	Phosphate acyltransferases
PAFIPGJD_02413	4.05e-135	-	5.2.1.8	-	O	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAFIPGJD_02414	4.34e-284	-	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAFIPGJD_02419	2.45e-228	-	-	-	I	-	-	-	Prenyltransferase and squalene oxidase repeat