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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PNEOPDPM_00002	3.31e-193	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD
PNEOPDPM_00003	1.11e-234	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PNEOPDPM_00004	5.49e-142	tonB2	-	-	M	ko:K03832	-	ko00000,ko02000	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PNEOPDPM_00005	8.22e-246	porQ	-	-	I	-	-	-	penicillin-binding protein
PNEOPDPM_00006	6.6e-159	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PNEOPDPM_00007	2.26e-210	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PNEOPDPM_00008	5.89e-231	pfkA	2.7.1.11	-	G	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PNEOPDPM_00009	4.71e-263	argK	-	-	E	ko:K07588	-	ko00000,ko01000	LAO AO transport system ATPase
PNEOPDPM_00010	1.78e-264	-	-	-	S	-	-	-	Protein of unknown function (DUF1573)
PNEOPDPM_00011	4.9e-83	-	-	-	S	-	-	-	Protein of unknown function (DUF1573)
PNEOPDPM_00012	0.0	-	-	-	S	-	-	-	Alpha-2-macroglobulin family
PNEOPDPM_00013	5.16e-120	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PNEOPDPM_00014	2e-200	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PNEOPDPM_00016	1.84e-09	-	-	-	-	-	-	-	-
PNEOPDPM_00017	0.0	-	-	-	UW	-	-	-	Hep Hag repeat protein
PNEOPDPM_00018	0.0	-	-	-	U	-	-	-	domain, Protein
PNEOPDPM_00019	1.1e-229	-	-	-	-	-	-	-	-
PNEOPDPM_00020	2.6e-281	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
PNEOPDPM_00022	0.0	-	-	-	MU	ko:K03640	-	ko00000,ko02000	Belongs to the ompA family
PNEOPDPM_00023	4.31e-298	queA	2.4.99.17	-	H	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PNEOPDPM_00024	1.86e-245	-	-	-	L	-	-	-	Domain of unknown function (DUF2027)
PNEOPDPM_00025	1.89e-114	cyaA	4.6.1.1	-	S	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	ko00000,ko00001,ko00002,ko01000	Adenylate cyclase
PNEOPDPM_00026	0.0	dpp11	-	-	E	-	-	-	peptidase S46
PNEOPDPM_00027	5.12e-31	-	-	-	-	-	-	-	-
PNEOPDPM_00028	7.57e-141	-	-	-	S	-	-	-	Zeta toxin
PNEOPDPM_00029	2.21e-278	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
PNEOPDPM_00030	0.0	fusA2	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	elongation factor G
PNEOPDPM_00031	6.84e-118	-	-	-	S	ko:K06940	-	ko00000	Putative zinc- or iron-chelating domain
PNEOPDPM_00032	2.55e-142	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase superfamily domain
PNEOPDPM_00033	5.53e-288	-	-	-	M	-	-	-	Glycosyl transferase family 1
PNEOPDPM_00034	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00035	0.0	metZ	2.5.1.49	-	E	ko:K01740,ko:K10764	ko00270,ko00920,ko01100,map00270,map00920,map01100	ko00000,ko00001,ko01000	O-acetylhomoserine aminocarboxypropyltransferase cysteine synthase
PNEOPDPM_00036	0.0	-	-	-	H	-	-	-	TonB-dependent Receptor Plug Domain
PNEOPDPM_00037	8.62e-311	-	-	-	-	-	-	-	-
PNEOPDPM_00038	1.32e-126	-	-	-	I	-	-	-	ORF6N domain
PNEOPDPM_00039	6.87e-312	-	-	-	V	-	-	-	Mate efflux family protein
PNEOPDPM_00040	0.0	-	-	-	H	-	-	-	Psort location OuterMembrane, score
PNEOPDPM_00041	0.0	-	-	-	G	-	-	-	Tetratricopeptide repeat protein
PNEOPDPM_00043	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
PNEOPDPM_00044	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_00045	1.53e-132	-	-	-	-	-	-	-	-
PNEOPDPM_00046	0.0	-	-	-	S	-	-	-	AAA domain, putative AbiEii toxin, Type IV TA system
PNEOPDPM_00047	5.73e-125	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
PNEOPDPM_00048	5.43e-229	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	glucokinase
PNEOPDPM_00049	2.05e-113	-	-	-	KT	-	-	-	Bacterial transcription activator, effector binding domain
PNEOPDPM_00050	2.42e-92	gloA	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Lactoylglutathione lyase
PNEOPDPM_00051	9.84e-180	-	-	-	S	-	-	-	Beta-lactamase superfamily domain
PNEOPDPM_00052	1.38e-162	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNEOPDPM_00053	5.73e-302	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PNEOPDPM_00054	8.14e-302	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
PNEOPDPM_00055	3.92e-250	-	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_00056	2.05e-312	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	Outer membrane efflux protein
PNEOPDPM_00057	1.87e-133	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PNEOPDPM_00058	7.81e-238	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PNEOPDPM_00059	0.0	-	-	-	G	-	-	-	alpha-mannosidase activity
PNEOPDPM_00060	3.76e-273	-	-	-	H	-	-	-	Uroporphyrinogen decarboxylase (URO-D)
PNEOPDPM_00061	2.41e-158	-	-	-	S	-	-	-	B12 binding domain
PNEOPDPM_00062	4.09e-275	-	-	-	H	-	-	-	Uroporphyrinogen decarboxylase (URO-D)
PNEOPDPM_00063	6.65e-235	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_00064	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PNEOPDPM_00065	1.18e-116	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_00066	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PNEOPDPM_00067	0.0	-	-	-	S	-	-	-	PQQ enzyme repeat protein
PNEOPDPM_00068	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PNEOPDPM_00069	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00070	0.0	-	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Periplasmic copper-binding protein (NosD)
PNEOPDPM_00071	3.24e-218	xynD_2	3.2.1.55	CBM6,GH43	G	ko:K15921	ko00520,map00520	ko00000,ko00001,ko01000	Carbohydrate binding module (family 6)
PNEOPDPM_00072	1.21e-75	-	-	-	H	-	-	-	cobalamin-transporting ATPase activity
PNEOPDPM_00073	0.0	-	-	-	M	-	-	-	Dipeptidase
PNEOPDPM_00074	9.35e-225	-	-	-	K	-	-	-	AraC-like ligand binding domain
PNEOPDPM_00075	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_00076	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_00077	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_00078	0.0	-	-	-	U	-	-	-	WD40-like Beta Propeller Repeat
PNEOPDPM_00080	0.0	-	-	-	G	-	-	-	Pectate lyase superfamily protein
PNEOPDPM_00081	8.7e-179	-	-	-	G	-	-	-	Pectate lyase superfamily protein
PNEOPDPM_00082	0.0	-	-	-	G	-	-	-	alpha-L-rhamnosidase
PNEOPDPM_00083	0.0	-	-	-	G	-	-	-	Pectate lyase superfamily protein
PNEOPDPM_00084	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Fibronectin type III-like domain
PNEOPDPM_00085	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00086	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PNEOPDPM_00087	0.0	-	-	-	G	-	-	-	mannose metabolic process
PNEOPDPM_00088	0.0	-	-	-	S	-	-	-	Gram-negative-bacterium-type cell wall biogenesis
PNEOPDPM_00089	1.92e-177	-	-	-	S	-	-	-	Gram-negative-bacterium-type cell wall biogenesis
PNEOPDPM_00090	0.0	-	-	-	O	-	-	-	Highly conserved protein containing a thioredoxin domain
PNEOPDPM_00091	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00092	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PNEOPDPM_00093	0.0	-	-	-	G	-	-	-	F5 8 type C domain
PNEOPDPM_00094	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Domain of unknown function (DUF4982)
PNEOPDPM_00095	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Fibronectin type III-like domain
PNEOPDPM_00096	5.84e-123	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, Bacteroides expansion family 1
PNEOPDPM_00097	2.35e-242	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_00098	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_00099	0.0	-	-	-	GKM	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PNEOPDPM_00100	0.0	-	-	-	T	-	-	-	alpha-L-rhamnosidase
PNEOPDPM_00101	0.0	-	-	-	G	-	-	-	hydrolase, family 65, central catalytic
PNEOPDPM_00102	1.29e-134	-	-	-	K	ko:K03088	-	ko00000,ko03021	DNA-templated transcription, initiation
PNEOPDPM_00103	3.68e-230	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_00104	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_00105	0.0	-	-	-	K	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_00106	3.52e-135	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PNEOPDPM_00107	4.55e-290	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PNEOPDPM_00108	0.0	-	-	-	M	-	-	-	AsmA-like C-terminal region
PNEOPDPM_00109	1.11e-203	cysL	-	-	K	-	-	-	LysR substrate binding domain
PNEOPDPM_00110	4.34e-104	lrp	-	-	K	ko:K03719,ko:K05800	-	ko00000,ko03000,ko03036	helix_turn_helix ASNC type
PNEOPDPM_00111	1.95e-308	metY	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	O-acetylhomoserine aminocarboxypropyltransferase
PNEOPDPM_00112	6.65e-194	-	-	-	S	-	-	-	Conserved hypothetical protein 698
PNEOPDPM_00113	0.0	mrcA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin-binding Protein
PNEOPDPM_00114	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PNEOPDPM_00115	0.0	-	-	-	K	-	-	-	luxR family
PNEOPDPM_00116	1.87e-223	-	-	-	G	-	-	-	Periplasmic binding proteins and sugar binding domain of LacI family
PNEOPDPM_00117	3.38e-72	-	-	-	-	-	-	-	-
PNEOPDPM_00119	2.35e-101	-	-	-	C	ko:K03605	-	ko00000,ko01000,ko01002	Hydrogenase maturation protease
PNEOPDPM_00120	3.04e-177	-	-	-	C	ko:K03620	ko02020,map02020	ko00000,ko00001	Domain of unknown function (DUF4405)
PNEOPDPM_00121	0.0	-	1.12.99.6	-	C	ko:K06281	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	Nickel-dependent hydrogenase
PNEOPDPM_00122	2.28e-275	-	1.12.99.6	-	C	ko:K06282	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	NiFe/NiFeSe hydrogenase small subunit C-terminal
PNEOPDPM_00123	2.58e-252	-	-	-	O	ko:K04655	-	ko00000	AIR synthase related protein, N-terminal domain
PNEOPDPM_00124	8.88e-271	-	-	-	O	ko:K04654	-	ko00000	Hydrogenase formation hypA family
PNEOPDPM_00125	8.85e-47	-	-	-	O	ko:K04653	-	ko00000	HupF/HypC family
PNEOPDPM_00126	0.0	-	-	-	O	ko:K04656	-	ko00000	Acylphosphatase
PNEOPDPM_00127	2.36e-73	hypA	-	-	S	ko:K04651	-	ko00000,ko03110	Probably plays a role in a hydrogenase nickel cofactor insertion step
PNEOPDPM_00128	7.83e-162	hypB	-	-	KO	ko:K04652	-	ko00000,ko03110	CobW/HypB/UreG, nucleotide-binding domain
PNEOPDPM_00129	0.0	-	-	-	C	ko:K09181	-	ko00000	CoA ligase
PNEOPDPM_00130	6.11e-142	-	-	-	L	-	-	-	Resolvase, N terminal domain
PNEOPDPM_00132	2.2e-312	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PNEOPDPM_00133	1.37e-308	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PNEOPDPM_00134	6.31e-79	-	-	-	S	-	-	-	PcfK-like protein
PNEOPDPM_00135	0.0	-	-	-	S	-	-	-	PcfJ-like protein
PNEOPDPM_00136	3.6e-209	-	-	-	-	-	-	-	-
PNEOPDPM_00137	8.22e-85	-	-	-	-	-	-	-	-
PNEOPDPM_00139	3.38e-50	-	-	-	-	-	-	-	-
PNEOPDPM_00140	4.18e-133	-	-	-	S	-	-	-	ASCH domain
PNEOPDPM_00142	1.97e-187	-	-	-	S	-	-	-	Tetratricopeptide repeat
PNEOPDPM_00143	6.36e-108	-	-	-	S	-	-	-	VRR-NUC domain
PNEOPDPM_00144	1.33e-110	-	-	-	-	-	-	-	-
PNEOPDPM_00145	1.46e-189	-	-	-	-	-	-	-	-
PNEOPDPM_00146	5.69e-171	-	-	-	F	-	-	-	Queuosine biosynthesis protein QueC
PNEOPDPM_00147	2.77e-80	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
PNEOPDPM_00148	1.39e-134	queE	4.3.99.3	-	H	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PNEOPDPM_00149	2.36e-143	-	-	-	F	-	-	-	GTP cyclohydrolase 1
PNEOPDPM_00150	1.87e-107	-	-	-	L	-	-	-	transposase activity
PNEOPDPM_00151	0.0	-	-	-	S	-	-	-	domain protein
PNEOPDPM_00153	0.0	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PNEOPDPM_00154	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00155	1.09e-149	-	-	-	-	-	-	-	-
PNEOPDPM_00156	3.6e-139	-	-	-	-	-	-	-	-
PNEOPDPM_00157	2.72e-261	-	-	-	S	-	-	-	Phage major capsid protein E
PNEOPDPM_00158	1.31e-75	-	-	-	-	-	-	-	-
PNEOPDPM_00159	1.11e-69	-	-	-	-	-	-	-	-
PNEOPDPM_00160	1.62e-111	-	3.1.3.41	-	-	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	-
PNEOPDPM_00161	2.81e-88	-	-	-	-	-	-	-	-
PNEOPDPM_00162	2.92e-126	-	-	-	-	-	-	-	-
PNEOPDPM_00163	7.45e-129	-	-	-	-	-	-	-	-
PNEOPDPM_00165	1.39e-83	-	-	-	K	ko:K18831	-	ko00000,ko02048,ko03000	Helix-turn-helix XRE-family like proteins
PNEOPDPM_00166	1.26e-65	-	-	-	S	ko:K19166	-	ko00000,ko01000,ko02048	HigB_toxin, RelE-like toxic component of a toxin-antitoxin system
PNEOPDPM_00167	1.82e-97	-	-	-	S	-	-	-	Phage regulatory protein Rha (Phage_pRha)
PNEOPDPM_00171	0.0	-	-	-	D	-	-	-	Phage-related minor tail protein
PNEOPDPM_00172	7.7e-226	-	-	-	-	-	-	-	-
PNEOPDPM_00173	0.0	-	-	-	J	-	-	-	Collagen triple helix repeat (20 copies)
PNEOPDPM_00177	0.0	-	-	-	S	-	-	-	Phage minor structural protein
PNEOPDPM_00178	8.74e-95	-	-	-	-	-	-	-	-
PNEOPDPM_00179	4.85e-65	-	-	-	-	-	-	-	-
PNEOPDPM_00180	3.2e-95	-	-	-	-	-	-	-	-
PNEOPDPM_00181	1.34e-112	-	-	-	-	-	-	-	-
PNEOPDPM_00182	1.25e-202	-	-	-	S	-	-	-	KilA-N domain
PNEOPDPM_00184	6.57e-136	-	-	-	-	-	-	-	-
PNEOPDPM_00185	0.0	-	-	-	L	-	-	-	SNF2 family N-terminal domain
PNEOPDPM_00186	1.51e-148	-	-	-	-	-	-	-	-
PNEOPDPM_00187	1.24e-94	-	-	-	-	-	-	-	-
PNEOPDPM_00188	2.07e-160	-	-	-	-	-	-	-	-
PNEOPDPM_00190	3.27e-238	-	-	-	-	-	-	-	-
PNEOPDPM_00191	2.99e-248	-	-	-	L	-	-	-	RecT family
PNEOPDPM_00193	6.23e-62	-	-	-	-	-	-	-	-
PNEOPDPM_00194	1.89e-134	-	-	-	KT	-	-	-	helix_turn_helix, Lux Regulon
PNEOPDPM_00195	5.93e-59	-	-	-	-	-	-	-	-
PNEOPDPM_00196	1.35e-73	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PNEOPDPM_00199	4.92e-288	-	-	-	D	-	-	-	Anion-transporting ATPase
PNEOPDPM_00200	8.76e-166	-	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	guanosine tetraphosphate metabolic process
PNEOPDPM_00204	2.25e-208	-	-	-	-	-	-	-	-
PNEOPDPM_00208	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PNEOPDPM_00209	6.74e-268	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PNEOPDPM_00210	1.09e-142	-	-	-	S	ko:K07164	-	ko00000	Zinc ribbon domain protein
PNEOPDPM_00211	0.0	tilS	6.3.4.19	-	D	ko:K04075	-	ko00000,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PNEOPDPM_00212	0.0	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PNEOPDPM_00213	1.94e-305	-	-	-	L	-	-	-	Belongs to the DEAD box helicase family
PNEOPDPM_00214	2.03e-272	luxQ_4	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
PNEOPDPM_00215	6.38e-192	-	-	-	M	-	-	-	Bacterial extracellular solute-binding proteins, family 3
PNEOPDPM_00216	0.0	-	-	-	H	-	-	-	Putative porin
PNEOPDPM_00217	1.01e-122	porG	1.2.7.3	-	C	ko:K00177	ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoglutarate ferredoxin oxidoreductase subunit gamma
PNEOPDPM_00218	1.98e-186	vorA	1.2.7.11, 1.2.7.3	-	C	ko:K00175	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Oxidoreductase
PNEOPDPM_00219	4.86e-259	vorB	1.2.7.11, 1.2.7.3	-	C	ko:K00174	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA
PNEOPDPM_00220	7.37e-37	-	1.2.7.3	-	C	ko:K00176	ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200	br01601,ko00000,ko00001,ko00002,ko01000	4Fe-4S dicluster domain
PNEOPDPM_00221	0.0	-	-	-	T	-	-	-	COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PNEOPDPM_00222	6.86e-295	-	-	-	T	-	-	-	GAF domain
PNEOPDPM_00223	0.0	-	-	-	G	-	-	-	Alpha-1,2-mannosidase
PNEOPDPM_00224	0.0	-	-	-	MU	-	-	-	Outer membrane efflux protein
PNEOPDPM_00225	0.0	-	-	-	S	-	-	-	cell adhesion involved in biofilm formation
PNEOPDPM_00226	2.9e-167	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PNEOPDPM_00227	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF3526)
PNEOPDPM_00228	0.0	-	-	-	S	-	-	-	ABC-2 family transporter protein
PNEOPDPM_00230	2.63e-211	-	-	-	S	ko:K08974	-	ko00000	Domain of unknown function (DUF368)
PNEOPDPM_00231	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PNEOPDPM_00232	0.0	glnS	6.1.1.18	-	J	ko:K01886	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PNEOPDPM_00233	5.74e-284	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	Natural resistance-associated macrophage protein
PNEOPDPM_00234	4.65e-312	-	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_00235	0.0	zraR_2	-	-	T	-	-	-	COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PNEOPDPM_00236	4.6e-307	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	Outer membrane efflux protein
PNEOPDPM_00237	6.05e-274	-	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_00238	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PNEOPDPM_00239	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PNEOPDPM_00240	2.87e-112	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_00241	7.58e-134	-	-	-	-	-	-	-	-
PNEOPDPM_00242	3.9e-111	-	-	-	S	-	-	-	Domain of unknown function (DUF5024)
PNEOPDPM_00243	7.14e-157	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	bacteriocin export ABC transporter, lactococcin 972 group
PNEOPDPM_00244	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PNEOPDPM_00245	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PNEOPDPM_00246	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PNEOPDPM_00247	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Efflux ABC transporter, permease protein
PNEOPDPM_00248	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PNEOPDPM_00249	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PNEOPDPM_00250	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PNEOPDPM_00251	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PNEOPDPM_00252	1.46e-50	-	-	-	S	-	-	-	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PNEOPDPM_00253	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 2, TIM barrel domain
PNEOPDPM_00254	5.53e-195	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PNEOPDPM_00255	0.0	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Galactose mutarotase-like
PNEOPDPM_00257	4.9e-202	-	-	-	I	-	-	-	Phosphate acyltransferases
PNEOPDPM_00258	6.45e-208	-	-	-	I	-	-	-	CDP-alcohol phosphatidyltransferase
PNEOPDPM_00259	3.41e-172	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Dehydrogenase
PNEOPDPM_00260	1.91e-108	aepX	2.7.7.15, 2.7.7.39, 5.4.2.9	-	IM	ko:K00968,ko:K00980,ko:K01841	ko00440,ko00564,ko01100,ko01120,ko01130,ko05231,map00440,map00564,map01100,map01120,map01130,map05231	ko00000,ko00001,ko00002,ko01000	Glycerol-3-phosphate cytidylyltransferase
PNEOPDPM_00261	6.23e-267	pdxA	1.1.1.262	-	C	ko:K00097	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the PdxA family
PNEOPDPM_00262	4.6e-249	-	-	-	L	-	-	-	Domain of unknown function (DUF4837)
PNEOPDPM_00263	1.13e-248	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PNEOPDPM_00264	0.0	ppiD	5.2.1.8	-	O	ko:K01802,ko:K03770	-	ko00000,ko01000,ko03110	peptidylprolyl isomerase
PNEOPDPM_00265	4.56e-286	tlyC	-	-	S	ko:K03699	-	ko00000,ko02042	Hemolysin
PNEOPDPM_00266	2.7e-154	-	-	-	S	-	-	-	Lipopolysaccharide-assembly, LptC-related
PNEOPDPM_00267	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PNEOPDPM_00268	4.82e-313	-	-	-	I	-	-	-	Psort location OuterMembrane, score
PNEOPDPM_00269	4e-156	coaX	2.7.1.33	-	F	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PNEOPDPM_00270	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
PNEOPDPM_00272	4.4e-29	-	-	-	S	-	-	-	Transglycosylase associated protein
PNEOPDPM_00273	5.01e-297	-	-	-	S	-	-	-	Domain of unknown function (DUF4105)
PNEOPDPM_00274	0.0	pafA	-	-	P	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
PNEOPDPM_00275	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PNEOPDPM_00276	1.15e-47	-	-	-	S	-	-	-	Protein of unknown function (DUF3791)
PNEOPDPM_00277	1.71e-126	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
PNEOPDPM_00278	3.67e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF3791)
PNEOPDPM_00279	5.75e-286	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PNEOPDPM_00280	7.58e-162	-	-	-	S	-	-	-	Bacterial transferase hexapeptide (six repeats)
PNEOPDPM_00281	7e-267	ald	1.4.1.1	-	C	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Alanine dehydrogenase/PNT, N-terminal domain
PNEOPDPM_00282	2.52e-136	-	-	-	S	ko:K02651	ko04112,map04112	ko00000,ko00001,ko02035,ko02044	COG NOG28004 non supervised orthologous group
PNEOPDPM_00283	3.96e-89	-	-	-	L	-	-	-	Bacterial DNA-binding protein
PNEOPDPM_00284	0.0	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PNEOPDPM_00285	5.39e-272	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PNEOPDPM_00286	4.9e-205	nlpD_1	-	-	M	-	-	-	Peptidase family M23
PNEOPDPM_00287	3.44e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PNEOPDPM_00288	1.14e-310	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PNEOPDPM_00289	1.08e-140	-	-	-	S	-	-	-	Domain of unknown function (DUF4290)
PNEOPDPM_00290	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PNEOPDPM_00291	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PNEOPDPM_00292	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PNEOPDPM_00293	0.0	-	-	-	S	-	-	-	Peptidase M64
PNEOPDPM_00294	6.91e-173	-	-	-	S	ko:K06911	-	ko00000	Belongs to the pirin family
PNEOPDPM_00296	0.0	-	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the synthesis of xanthosine monophosphate by the NAD dependent oxidation of inosine monophosphate
PNEOPDPM_00297	5.68e-74	-	-	-	S	-	-	-	Peptidase M15
PNEOPDPM_00298	3.26e-225	-	-	-	L	-	-	-	Type III restriction enzyme res subunit
PNEOPDPM_00300	1.81e-82	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PNEOPDPM_00301	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PNEOPDPM_00302	9.5e-201	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PNEOPDPM_00303	2.71e-169	porT	-	-	S	-	-	-	PorT protein
PNEOPDPM_00304	2.2e-23	-	-	-	C	-	-	-	4Fe-4S binding domain
PNEOPDPM_00305	4.27e-77	-	-	-	S	-	-	-	Protein of unknown function (DUF3276)
PNEOPDPM_00306	6.25e-217	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PNEOPDPM_00307	3.5e-50	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit YajC
PNEOPDPM_00308	8.06e-234	-	-	-	S	-	-	-	YbbR-like protein
PNEOPDPM_00309	8.55e-129	coaE	2.7.1.24	-	H	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PNEOPDPM_00310	1.41e-98	-	-	-	S	-	-	-	COG NOG14473 non supervised orthologous group
PNEOPDPM_00311	0.0	lon	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PNEOPDPM_00312	1.39e-169	smtA	2.1.1.223	-	J	ko:K15460	-	ko00000,ko01000,ko03016	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PNEOPDPM_00313	1.77e-235	-	-	-	I	-	-	-	Lipid kinase
PNEOPDPM_00314	1.53e-286	bioF	2.3.1.29, 2.3.1.47	-	E	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	2-amino-3-ketobutyrate CoA ligase
PNEOPDPM_00315	1.4e-292	yaaT	-	-	S	-	-	-	PSP1 C-terminal domain protein
PNEOPDPM_00316	4.38e-128	gldH	-	-	S	-	-	-	GldH lipoprotein
PNEOPDPM_00317	0.0	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PNEOPDPM_00318	0.0	mrdA	3.4.16.4	-	M	ko:K05515	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PNEOPDPM_00319	2.42e-112	mreD	-	-	S	-	-	-	rod shape-determining protein MreD
PNEOPDPM_00320	3.69e-197	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	shape-determining protein MreC
PNEOPDPM_00321	9.91e-241	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod shape-determining protein MreB
PNEOPDPM_00322	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
PNEOPDPM_00323	4.27e-58	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_00325	4.33e-136	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_00326	6.79e-219	-	-	-	L	-	-	-	COG NOG11942 non supervised orthologous group
PNEOPDPM_00327	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
PNEOPDPM_00328	0.0	ltaS2	-	-	M	-	-	-	Sulfatase
PNEOPDPM_00329	7.46e-118	-	-	-	S	-	-	-	Protein of unknown function (DUF1097)
PNEOPDPM_00330	0.0	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PNEOPDPM_00331	1.26e-61	-	-	-	D	ko:K09888	-	ko00000,ko03036	Cell division protein ZapA
PNEOPDPM_00332	7.93e-60	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_00333	1.42e-39	-	-	-	S	-	-	-	Winged helix-turn-helix domain (DUF2582)
PNEOPDPM_00334	3.27e-159	-	-	-	S	-	-	-	B3/4 domain
PNEOPDPM_00335	1.01e-181	-	-	-	S	ko:K05810	-	ko00000,ko01000	Belongs to the multicopper oxidase YfiH RL5 family
PNEOPDPM_00336	4.67e-260	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PNEOPDPM_00337	4.77e-130	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PNEOPDPM_00338	3.68e-125	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Hypoxanthine phosphoribosyltransferase
PNEOPDPM_00340	1.4e-157	-	-	-	-	-	-	-	-
PNEOPDPM_00341	3.4e-154	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PNEOPDPM_00342	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PNEOPDPM_00343	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PNEOPDPM_00344	0.0	-	-	-	T	-	-	-	Sigma-54 interaction domain
PNEOPDPM_00345	3.51e-308	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PNEOPDPM_00346	0.0	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PNEOPDPM_00347	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PNEOPDPM_00348	1.54e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF3244)
PNEOPDPM_00349	4.45e-252	-	-	-	S	-	-	-	Domain of unknown function (DUF4831)
PNEOPDPM_00350	0.0	-	-	-	E	ko:K03305	-	ko00000	amino acid peptide transporter
PNEOPDPM_00351	7.05e-19	-	-	-	-	-	-	-	-
PNEOPDPM_00352	6.68e-237	bioB	2.8.1.6	-	H	ko:K01012	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PNEOPDPM_00353	0.0	bioA	2.6.1.62	-	H	ko:K00833	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
PNEOPDPM_00354	2.39e-275	bioF	2.3.1.29, 2.3.1.47	-	E	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	8-amino-7-oxononanoate synthase
PNEOPDPM_00355	8.46e-166	-	3.1.1.85	-	S	ko:K09789	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Protein of unknown function (DUF452)
PNEOPDPM_00356	1.35e-188	bioC	2.1.1.197	-	H	ko:K02169	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway
PNEOPDPM_00357	4.32e-163	bioD	6.3.3.3	-	H	ko:K01935	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PNEOPDPM_00358	2.03e-87	-	-	-	S	-	-	-	Protein of unknown function (DUF1232)
PNEOPDPM_00359	6.52e-217	-	-	-	-	-	-	-	-
PNEOPDPM_00360	1.82e-107	-	-	-	-	-	-	-	-
PNEOPDPM_00361	1.34e-120	-	-	-	C	-	-	-	lyase activity
PNEOPDPM_00362	3.86e-108	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_00363	4.3e-158	-	-	-	T	-	-	-	Transcriptional regulator
PNEOPDPM_00364	3.07e-302	qseC	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_00365	1.87e-97	-	-	-	S	-	-	-	Putative beta-lactamase-inhibitor-like, PepSY-like
PNEOPDPM_00366	3.75e-209	-	-	-	S	-	-	-	Putative beta-lactamase-inhibitor-like, PepSY-like
PNEOPDPM_00367	3.13e-31	-	-	-	S	-	-	-	Putative beta-lactamase-inhibitor-like, PepSY-like
PNEOPDPM_00368	9.75e-131	-	-	-	-	-	-	-	-
PNEOPDPM_00369	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF2961)
PNEOPDPM_00370	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_00371	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_00372	1.97e-228	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_00373	4.13e-122	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PNEOPDPM_00374	5.08e-149	-	-	-	S	-	-	-	Protein of unknown function (DUF3256)
PNEOPDPM_00375	2.84e-208	-	-	-	EG	ko:K08978	-	ko00000,ko02000	EamA-like transporter family
PNEOPDPM_00376	7.84e-202	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PNEOPDPM_00377	0.0	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
PNEOPDPM_00378	0.0	uvrD2	-	-	L	-	-	-	COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PNEOPDPM_00379	2.38e-149	-	-	-	S	-	-	-	Membrane
PNEOPDPM_00380	2.61e-140	-	-	-	S	-	-	-	Domain of unknown function (DUF4923)
PNEOPDPM_00381	0.0	-	-	-	E	-	-	-	Oligoendopeptidase f
PNEOPDPM_00382	0.0	-	-	-	EGP	ko:K08169	-	ko00000,ko02000	Sugar (and other) transporter
PNEOPDPM_00383	3.27e-19	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_00384	9.91e-303	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PNEOPDPM_00385	0.0	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_00386	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_00387	2.49e-123	-	-	-	K	-	-	-	Putative helix-turn-helix protein, YlxM / p13 like
PNEOPDPM_00388	1.14e-275	fba	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate
PNEOPDPM_00389	1.37e-54	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	50S ribosomal protein L31 type B
PNEOPDPM_00390	6.46e-266	mdsC	-	-	S	-	-	-	Phosphotransferase enzyme family
PNEOPDPM_00392	5.4e-69	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNEOPDPM_00393	0.0	cca	2.7.7.19, 2.7.7.72	-	J	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	tRNA nucleotidyltransferase
PNEOPDPM_00394	2.05e-191	-	-	-	-	-	-	-	-
PNEOPDPM_00396	0.0	-	-	-	S	-	-	-	Phosphotransferase enzyme family
PNEOPDPM_00397	9.84e-182	hddC	-	-	JM	-	-	-	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon)
PNEOPDPM_00398	3.09e-133	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PNEOPDPM_00399	2.63e-240	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_00400	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_00401	0.0	-	-	-	H	-	-	-	Susd and RagB outer membrane lipoprotein
PNEOPDPM_00402	1.67e-249	-	-	-	S	-	-	-	Endonuclease/Exonuclease/phosphatase family
PNEOPDPM_00403	0.0	-	-	-	Q	-	-	-	N-terminal domain of BNR-repeat neuraminidase
PNEOPDPM_00404	7.3e-272	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PNEOPDPM_00405	6.85e-226	-	-	-	S	-	-	-	Metalloenzyme superfamily
PNEOPDPM_00406	1.21e-246	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PNEOPDPM_00407	0.0	ppsA	-	-	GKT	-	-	-	Pyruvate phosphate dikinase, PEP pyruvate binding domain
PNEOPDPM_00408	0.0	gdh	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PNEOPDPM_00409	1.05e-112	ftnA	1.16.3.2	-	P	ko:K02217	-	ko00000,ko01000	Iron-storage protein
PNEOPDPM_00410	4.81e-133	ruvC	3.1.22.4	-	L	ko:K01159	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PNEOPDPM_00411	1.6e-69	-	-	-	S	-	-	-	Domain of unknown function (DUF4286)
PNEOPDPM_00413	3.69e-278	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PNEOPDPM_00417	0.0	-	-	-	M	ko:K03646	-	ko00000,ko02000	translation initiation factor activity
PNEOPDPM_00419	4.21e-66	-	-	-	-	-	-	-	-
PNEOPDPM_00420	0.0	-	-	-	S	-	-	-	Phage minor structural protein
PNEOPDPM_00421	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00422	0.0	-	-	-	D	-	-	-	Phage-related minor tail protein
PNEOPDPM_00423	9.96e-135	-	-	-	-	-	-	-	-
PNEOPDPM_00424	3.37e-115	-	-	-	-	-	-	-	-
PNEOPDPM_00430	4.35e-193	-	-	-	-	-	-	-	-
PNEOPDPM_00433	1.3e-82	-	-	-	-	-	-	-	-
PNEOPDPM_00434	8.26e-96	-	-	-	S	-	-	-	Domain of unknown function (DUF5053)
PNEOPDPM_00436	2.83e-197	-	-	-	-	-	-	-	-
PNEOPDPM_00437	7.1e-224	-	-	-	-	-	-	-	-
PNEOPDPM_00438	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00441	1.3e-95	-	-	-	-	-	-	-	-
PNEOPDPM_00442	9.79e-119	-	-	-	S	-	-	-	Bacteriophage holin family
PNEOPDPM_00443	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00444	3.75e-141	-	-	-	-	-	-	-	-
PNEOPDPM_00445	5.64e-59	-	-	-	-	-	-	-	-
PNEOPDPM_00446	3.62e-116	-	-	-	-	-	-	-	-
PNEOPDPM_00447	1.12e-196	-	-	-	-	-	-	-	-
PNEOPDPM_00448	1.24e-170	-	-	-	-	-	-	-	-
PNEOPDPM_00449	2.17e-315	-	-	-	-	-	-	-	-
PNEOPDPM_00451	1.66e-214	-	-	-	OU	ko:K04773	-	ko00000,ko01000,ko01002	Peptidase, S49 (Protease IV) family protein
PNEOPDPM_00452	4.4e-106	-	-	-	-	-	-	-	-
PNEOPDPM_00453	4.67e-114	-	-	-	-	-	-	-	-
PNEOPDPM_00454	3.05e-69	-	3.6.4.12	-	L	ko:K02316,ko:K17680	ko03030,map03030	ko00000,ko00001,ko01000,ko03029,ko03032	DNA primase activity
PNEOPDPM_00455	0.0	-	-	-	L	-	-	-	zinc finger
PNEOPDPM_00456	1.7e-92	-	-	-	-	-	-	-	-
PNEOPDPM_00459	2.72e-56	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_00461	4.47e-76	-	-	-	-	-	-	-	-
PNEOPDPM_00465	0.0	-	2.1.1.37	-	L	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PNEOPDPM_00469	6.35e-70	-	-	-	-	-	-	-	-
PNEOPDPM_00471	2.78e-82	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PNEOPDPM_00475	1e-126	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_00476	8.38e-103	-	-	-	-	-	-	-	-
PNEOPDPM_00477	3.96e-278	-	-	-	-	-	-	-	-
PNEOPDPM_00478	0.0	-	-	-	P	-	-	-	Domain of unknown function (DUF4976)
PNEOPDPM_00479	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_00480	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PNEOPDPM_00481	0.0	-	-	-	T	-	-	-	helix_turn_helix, arabinose operon control protein
PNEOPDPM_00482	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PNEOPDPM_00483	5.71e-194	-	-	-	S	-	-	-	Outer membrane protein beta-barrel domain
PNEOPDPM_00484	4.38e-257	-	-	-	S	-	-	-	Putative carbohydrate metabolism domain
PNEOPDPM_00485	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PNEOPDPM_00486	0.0	-	-	-	H	-	-	-	NAD metabolism ATPase kinase
PNEOPDPM_00487	0.0	relA	2.7.6.5, 3.1.7.2	-	KT	ko:K00951,ko:K01139	ko00230,map00230	ko00000,ko00001,ko01000,ko03009	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PNEOPDPM_00488	2.39e-191	-	-	-	M	ko:K03442	-	ko00000,ko02000	mechanosensitive ion channel
PNEOPDPM_00489	1.19e-99	-	-	-	S	-	-	-	Tetratricopeptide repeat
PNEOPDPM_00490	6.16e-63	-	-	-	-	-	-	-	-
PNEOPDPM_00491	1.92e-60	-	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
PNEOPDPM_00492	1.1e-257	leuB	1.1.1.85	-	C	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PNEOPDPM_00493	1.79e-105	mgsA	4.2.3.3	-	G	ko:K01734	ko00640,ko01120,map00640,map01120	ko00000,ko00001,ko01000	methylglyoxal synthase
PNEOPDPM_00494	0.0	leuA_1	2.3.1.182	-	E	ko:K09011	ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the alpha-IPM synthase homocitrate synthase family
PNEOPDPM_00495	2.35e-138	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PNEOPDPM_00496	0.0	leuC	4.2.1.33, 4.2.1.35	-	H	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PNEOPDPM_00497	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PNEOPDPM_00499	0.0	-	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	L-arabinose isomerase
PNEOPDPM_00500	0.0	-	-	-	G	-	-	-	alpha-L-rhamnosidase
PNEOPDPM_00501	6.25e-291	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase superfamily domain
PNEOPDPM_00502	0.0	-	-	-	G	ko:K07502,ko:K19804	-	ko00000	SusD family
PNEOPDPM_00503	0.0	-	-	-	H	-	-	-	TonB dependent receptor
PNEOPDPM_00504	3.27e-255	ilvC	1.1.1.86	-	E	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Ketol-acid reductoisomerase
PNEOPDPM_00505	1.45e-178	-	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
PNEOPDPM_00506	9.27e-121	ilvN	2.2.1.6	-	E	ko:K01653	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	synthase small subunit
PNEOPDPM_00507	0.0	ilvB	2.2.1.6	-	H	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Acetolactate synthase, large subunit
PNEOPDPM_00508	0.0	ilvD	4.2.1.9	-	EG	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the IlvD Edd family
PNEOPDPM_00509	0.0	-	-	-	S	-	-	-	Predicted AAA-ATPase
PNEOPDPM_00510	1.08e-144	sanA	-	-	S	ko:K03748	-	ko00000	DUF218 domain
PNEOPDPM_00511	5.9e-207	-	-	-	-	-	-	-	-
PNEOPDPM_00512	0.0	-	-	-	G	-	-	-	Alpha-L-fucosidase
PNEOPDPM_00513	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_00514	0.0	-	-	-	P	-	-	-	TonB-dependent receptor plug domain
PNEOPDPM_00515	2.26e-242	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_00517	2.11e-274	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_00518	2.91e-181	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
PNEOPDPM_00519	4.33e-234	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PNEOPDPM_00520	0.0	-	-	-	H	-	-	-	COG NOG08812 non supervised orthologous group
PNEOPDPM_00521	0.0	prtQ	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Collagenase
PNEOPDPM_00522	1.25e-198	-	5.2.1.8	-	O	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PNEOPDPM_00523	1.76e-152	-	-	-	S	ko:K07118	-	ko00000	NmrA-like family
PNEOPDPM_00524	6.71e-153	-	3.1.3.10, 3.1.3.104	-	S	ko:K07025,ko:K20866,ko:K21063	ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Haloacid dehalogenase-like hydrolase
PNEOPDPM_00525	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PNEOPDPM_00526	4.62e-81	-	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_00527	7.68e-253	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PNEOPDPM_00528	4.89e-119	rnfA	-	-	C	ko:K03617	-	ko00000	Part of a membrane complex involved in electron transport
PNEOPDPM_00529	1.49e-120	rnfE	-	-	C	ko:K03613	-	ko00000	Part of a membrane complex involved in electron transport
PNEOPDPM_00530	2.8e-128	rnfG	-	-	C	ko:K03612	-	ko00000	Part of a membrane complex involved in electron transport
PNEOPDPM_00531	2.88e-223	rnfD	-	-	C	ko:K03614	-	ko00000	Part of a membrane complex involved in electron transport
PNEOPDPM_00532	9.16e-301	rnfC	-	-	C	ko:K03615	-	ko00000	Part of a membrane complex involved in electron transport
PNEOPDPM_00533	6.12e-210	rnfB	-	-	C	ko:K03616	-	ko00000	Ferredoxin
PNEOPDPM_00534	3.42e-92	-	-	-	T	ko:K03803	-	ko00000,ko03021	Positive regulator of sigma(E), RseC MucC
PNEOPDPM_00535	0.0	-	-	-	M	-	-	-	Protein of unknown function (DUF3078)
PNEOPDPM_00536	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PNEOPDPM_00537	0.0	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
PNEOPDPM_00539	1.63e-184	kdsB	2.7.7.38	-	M	ko:K00979	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PNEOPDPM_00540	0.0	-	-	-	P	ko:K03455	-	ko00000	COG0475 Kef-type K transport systems, membrane components
PNEOPDPM_00541	1.84e-155	-	-	-	K	-	-	-	Putative DNA-binding domain
PNEOPDPM_00542	0.0	-	-	-	O	ko:K07403	-	ko00000	serine protease
PNEOPDPM_00543	1.07e-114	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PNEOPDPM_00544	2.47e-251	ltaE	4.1.2.48	-	E	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Threonine aldolase
PNEOPDPM_00545	0.0	-	-	-	S	-	-	-	Endonuclease/Exonuclease/phosphatase family
PNEOPDPM_00546	2.06e-312	pbuX	-	-	F	ko:K16345	-	ko00000,ko02000	Permease family
PNEOPDPM_00547	5.38e-131	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PNEOPDPM_00548	3.72e-95	-	-	-	Q	-	-	-	Domain of unknown function (DUF4442)
PNEOPDPM_00549	4.87e-118	-	5.4.2.12	-	G	ko:K15634,ko:K15640	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Phosphoglycerate mutase family
PNEOPDPM_00550	5.08e-299	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter permease
PNEOPDPM_00551	9.27e-219	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNEOPDPM_00552	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNEOPDPM_00553	4.9e-49	-	-	-	-	-	-	-	-
PNEOPDPM_00554	2.28e-63	-	-	-	S	-	-	-	ParE toxin of type II toxin-antitoxin system, parDE
PNEOPDPM_00555	7.19e-197	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
PNEOPDPM_00556	5.44e-297	-	-	-	S	-	-	-	Major fimbrial subunit protein (FimA)
PNEOPDPM_00558	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00559	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00560	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
PNEOPDPM_00561	5.26e-164	-	-	-	S	-	-	-	Protein of unknown function (DUF1566)
PNEOPDPM_00562	5.12e-71	-	-	-	-	-	-	-	-
PNEOPDPM_00563	1.64e-61	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_00564	2.12e-91	-	-	-	N	-	-	-	Leucine rich repeats (6 copies)
PNEOPDPM_00565	0.0	-	-	-	M	-	-	-	Leucine rich repeats (6 copies)
PNEOPDPM_00566	0.00027	-	-	-	L	-	-	-	Belongs to the bacterial histone-like protein family
PNEOPDPM_00568	0.0	-	-	-	S	ko:K21557	-	ko00000,ko03000	Psort location
PNEOPDPM_00569	0.0	-	3.2.1.135	GH13	G	ko:K21575	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 13 family
PNEOPDPM_00570	0.0	susB	3.2.1.20, 3.2.1.3	GH31,GH97	G	ko:K01187,ko:K21574	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl-hydrolase 97 N-terminal
PNEOPDPM_00571	0.0	susC	-	-	P	ko:K21573	-	ko00000,ko02000	CarboxypepD_reg-like domain
PNEOPDPM_00572	0.0	-	-	-	M	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_00573	2.02e-292	-	-	-	S	ko:K21571	-	ko00000	Pfam:DUF5019
PNEOPDPM_00574	0.0	-	-	-	S	-	-	-	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PNEOPDPM_00575	0.0	-	-	-	S	-	-	-	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PNEOPDPM_00576	0.0	-	-	-	M	-	-	-	COG3209 Rhs family protein
PNEOPDPM_00577	1.18e-226	-	-	-	CO	-	-	-	Domain of unknown function (DUF5106)
PNEOPDPM_00578	4.25e-177	loiP	-	-	O	ko:K07387	-	ko00000,ko01000,ko01002	Peptidase family M48
PNEOPDPM_00579	3.54e-141	-	-	-	S	ko:K08999	-	ko00000	Bifunctional nuclease
PNEOPDPM_00580	3.74e-302	nupC	-	-	F	ko:K03317	-	ko00000	Na+ dependent nucleoside transporter C-terminus
PNEOPDPM_00581	6.15e-170	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PNEOPDPM_00582	1.22e-216	-	-	-	GK	-	-	-	AraC-like ligand binding domain
PNEOPDPM_00583	1.23e-235	-	-	-	S	-	-	-	Sugar-binding cellulase-like
PNEOPDPM_00584	0.0	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_00585	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PNEOPDPM_00586	3.21e-208	-	-	-	-	-	-	-	-
PNEOPDPM_00587	5.49e-163	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
PNEOPDPM_00588	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PNEOPDPM_00589	8.33e-138	-	5.3.1.9	-	G	ko:K06859	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucose-6-phosphate isomerase (GPI)
PNEOPDPM_00590	2.83e-236	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PNEOPDPM_00591	2.65e-213	-	5.3.1.9	-	G	ko:K06859	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucose-6-phosphate isomerase (GPI)
PNEOPDPM_00592	0.0	araE	-	-	EGP	ko:K02100	-	ko00000,ko02000	Fungal trichothecene efflux pump (TRI12)
PNEOPDPM_00593	5.79e-120	maa	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PNEOPDPM_00594	5.02e-92	-	-	-	S	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
PNEOPDPM_00596	1.93e-241	-	3.5.3.1	-	E	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	ko00000,ko00001,ko00002,ko01000	COG0010 Arginase agmatinase formimionoglutamate hydrolase arginase family
PNEOPDPM_00597	8.76e-82	-	-	-	L	-	-	-	Bacterial DNA-binding protein
PNEOPDPM_00598	0.0	-	-	-	JKL	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_00600	6.85e-55	-	-	-	DJ	ko:K06218	-	ko00000,ko02048	nuclease activity
PNEOPDPM_00601	1.39e-314	-	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	GMP synthase C terminal domain
PNEOPDPM_00602	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PNEOPDPM_00603	6.84e-210	-	-	-	S	-	-	-	Transposase
PNEOPDPM_00604	1.86e-140	-	-	-	T	-	-	-	crp fnr family
PNEOPDPM_00605	0.0	-	-	-	MU	-	-	-	Outer membrane efflux protein
PNEOPDPM_00606	1.04e-225	-	-	-	M	ko:K01993	-	ko00000	Hemolysin secretion protein D
PNEOPDPM_00607	4.15e-278	-	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	membrane
PNEOPDPM_00608	2.13e-295	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PNEOPDPM_00609	3.78e-217	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PNEOPDPM_00610	1.02e-173	yfbT	-	-	S	-	-	-	HAD hydrolase, family IA, variant 3
PNEOPDPM_00611	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PNEOPDPM_00612	6.74e-244	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PNEOPDPM_00613	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PNEOPDPM_00614	2.45e-146	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PNEOPDPM_00616	8.59e-133	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PNEOPDPM_00617	1.06e-199	-	-	-	S	-	-	-	Domain of unknown function (DUF1732)
PNEOPDPM_00618	1.82e-180	yeaZ	-	-	O	ko:K14742	-	ko00000,ko03016	Universal bacterial protein YeaZ
PNEOPDPM_00619	0.0	-	-	-	H	-	-	-	COG NOG08812 non supervised orthologous group
PNEOPDPM_00620	7.01e-267	oadB	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	Glutaconyl-CoA decarboxylase subunit beta
PNEOPDPM_00621	6.56e-92	mmdC	-	-	I	-	-	-	Biofilm PGA synthesis protein PgaD
PNEOPDPM_00622	4.05e-209	-	-	-	C	-	-	-	Oxaloacetate decarboxylase, gamma chain
PNEOPDPM_00623	0.0	-	-	-	I	-	-	-	Carboxyl transferase domain
PNEOPDPM_00624	2e-94	mce	5.1.99.1	-	E	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	methylmalonyl-CoA epimerase
PNEOPDPM_00625	0.0	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_00626	1.61e-130	-	-	-	C	-	-	-	nitroreductase
PNEOPDPM_00627	4.65e-181	-	-	-	S	-	-	-	Domain of unknown function (DUF2520)
PNEOPDPM_00628	2.07e-123	kdsC	3.1.3.45	-	S	ko:K03270	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
PNEOPDPM_00629	1.17e-138	maf	-	-	D	ko:K06287	-	ko00000	Maf-like protein
PNEOPDPM_00630	7.9e-37	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PNEOPDPM_00631	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00632	1.42e-267	uspA	-	-	T	-	-	-	Belongs to the universal stress protein A family
PNEOPDPM_00633	2.54e-60	-	-	-	S	-	-	-	DNA-binding protein
PNEOPDPM_00634	7.43e-160	-	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
PNEOPDPM_00635	1.98e-182	batE	-	-	T	-	-	-	Tetratricopeptide repeat
PNEOPDPM_00636	0.0	batD	-	-	S	-	-	-	Oxygen tolerance
PNEOPDPM_00637	2.78e-121	batC	-	-	S	-	-	-	Tetratricopeptide repeat
PNEOPDPM_00638	2.5e-234	batB	-	-	S	ko:K07114	-	ko00000,ko02000	Von Willebrand factor type A domain
PNEOPDPM_00639	1.7e-215	batA	-	-	S	ko:K07114	-	ko00000,ko02000	Von Willebrand factor type A domain
PNEOPDPM_00640	3.79e-226	-	-	-	O	-	-	-	Psort location CytoplasmicMembrane, score
PNEOPDPM_00641	1.84e-204	-	-	-	S	-	-	-	protein (some members contain a von Willebrand factor type A (vWA) domain)
PNEOPDPM_00642	5.61e-227	moxR	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
PNEOPDPM_00643	1.38e-251	-	-	-	L	-	-	-	Belongs to the bacterial histone-like protein family
PNEOPDPM_00644	1.58e-72	himA	-	-	L	ko:K03530,ko:K04764	-	ko00000,ko03032,ko03036,ko03400	Belongs to the bacterial histone-like protein family
PNEOPDPM_00645	0.0	rimO	2.8.4.4	-	J	ko:K14441	-	ko00000,ko01000,ko03009	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
PNEOPDPM_00646	2.65e-218	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PNEOPDPM_00647	4.73e-291	nspC	4.1.1.96	-	E	ko:K13747	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	carboxynorspermidine decarboxylase
PNEOPDPM_00648	0.0	-	-	-	CO	-	-	-	Thioredoxin-like
PNEOPDPM_00649	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PNEOPDPM_00650	3.78e-220	-	-	-	KT	-	-	-	Transcriptional regulatory protein, C terminal
PNEOPDPM_00651	4.54e-151	-	-	-	F	-	-	-	Hydrolase of X-linked nucleoside diphosphate N terminal
PNEOPDPM_00653	3.08e-207	-	-	-	K	-	-	-	Transcriptional regulator
PNEOPDPM_00655	1.43e-223	-	-	-	S	-	-	-	Domain of unknown function (DUF362)
PNEOPDPM_00656	0.0	-	-	-	C	-	-	-	4Fe-4S binding domain
PNEOPDPM_00657	4.89e-287	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PNEOPDPM_00658	1.26e-245	lptG	-	-	S	ko:K11720	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Permease, YjgP YjgQ family
PNEOPDPM_00659	0.0	-	-	-	S	-	-	-	Calycin-like beta-barrel domain
PNEOPDPM_00660	2.13e-295	-	-	-	S	-	-	-	Domain of unknown function (DUF4925)
PNEOPDPM_00662	3.91e-268	-	-	-	S	-	-	-	Domain of unknown function (DUF4925)
PNEOPDPM_00664	1.76e-257	-	-	-	S	-	-	-	Domain of unknown function (DUF4925)
PNEOPDPM_00665	2.41e-118	-	6.4.1.1	-	I	ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Biotin carboxyl carrier protein
PNEOPDPM_00666	0.0	-	6.3.4.14, 6.4.1.2, 6.4.1.3	-	I	ko:K01961,ko:K01965	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase C-terminal domain
PNEOPDPM_00667	0.0	-	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Carboxyl transferase domain
PNEOPDPM_00668	3.32e-301	-	-	-	S	-	-	-	Belongs to the UPF0597 family
PNEOPDPM_00669	6.49e-210	-	-	-	E	-	-	-	Iron-regulated membrane protein
PNEOPDPM_00670	1.55e-308	-	-	-	V	-	-	-	Multidrug transporter MatE
PNEOPDPM_00671	2.43e-140	MA20_07440	-	-	-	-	-	-	-
PNEOPDPM_00672	0.0	-	-	-	L	-	-	-	AAA domain
PNEOPDPM_00673	2.42e-200	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PNEOPDPM_00674	1.01e-294	ydiI	3.1.2.28	-	Q	ko:K19222	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Thioesterase superfamily
PNEOPDPM_00675	2.73e-266	entC	5.4.4.2	-	HQ	ko:K02361,ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Isochorismate synthase
PNEOPDPM_00676	0.0	menD	2.2.1.9	-	H	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PNEOPDPM_00677	2.16e-200	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PNEOPDPM_00678	1.2e-262	-	-	-	S	-	-	-	Protein of unknown function (DUF1016)
PNEOPDPM_00679	0.0	menC	-	-	M	-	-	-	Mandelate racemase muconate lactonizing enzyme
PNEOPDPM_00680	0.0	-	-	-	E	-	-	-	Domain of Unknown Function with PDB structure (DUF3857)
PNEOPDPM_00681	0.0	-	-	-	E	-	-	-	Domain of Unknown Function with PDB structure (DUF3858)
PNEOPDPM_00682	0.0	-	3.2.1.35	-	G	ko:K01197	ko00531,ko01100,map00531,map01100	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylglucosaminidase
PNEOPDPM_00683	1.8e-311	-	-	-	S	-	-	-	6-bladed beta-propeller
PNEOPDPM_00684	0.0	-	-	-	KT	-	-	-	BlaR1 peptidase M56
PNEOPDPM_00685	1.39e-88	-	-	-	K	-	-	-	Penicillinase repressor
PNEOPDPM_00686	0.0	-	-	-	E	-	-	-	Dipeptidyl peptidase IV (DPP IV) N-terminal region
PNEOPDPM_00687	0.0	-	-	-	S	-	-	-	6-bladed beta-propeller
PNEOPDPM_00688	5.95e-96	-	-	-	C	ko:K02124	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	ATPase, subunit K
PNEOPDPM_00689	0.0	-	-	-	U	ko:K02123	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	Belongs to the V-ATPase 116 kDa subunit family
PNEOPDPM_00690	3.65e-132	-	-	-	C	ko:K02120	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	ATP synthase subunit D
PNEOPDPM_00691	1.14e-315	ntpB	-	-	C	ko:K02118	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	the B subunit is part of the catalytic core of the ATP synthase complex
PNEOPDPM_00692	0.0	atpA	3.6.3.14, 3.6.3.15	-	C	ko:K02117	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
PNEOPDPM_00693	5.35e-213	-	-	-	C	-	-	-	Protein of unknown function (DUF2764)
PNEOPDPM_00694	4.26e-116	-	-	-	C	ko:K02121	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	subunit E
PNEOPDPM_00695	1.53e-122	paiA	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PNEOPDPM_00697	1.06e-282	-	-	-	G	-	-	-	Glycosyl hydrolase family 20, catalytic domain
PNEOPDPM_00698	0.0	ybeZ_1	-	-	T	ko:K07175	-	ko00000	Phosphate starvation protein PhoH
PNEOPDPM_00699	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PNEOPDPM_00700	0.0	-	-	-	P	-	-	-	Outer membrane protein beta-barrel family
PNEOPDPM_00701	1.33e-297	-	-	-	K	ko:K13652	-	ko00000,ko03000	Bacterial transcription activator, effector binding domain
PNEOPDPM_00702	3.05e-181	-	-	-	C	-	-	-	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PNEOPDPM_00703	9.7e-133	-	-	-	S	-	-	-	Flavin reductase like domain
PNEOPDPM_00704	6.59e-124	-	-	-	C	-	-	-	Flavodoxin
PNEOPDPM_00706	2.07e-60	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_00707	2.29e-191	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PNEOPDPM_00708	0.0	-	-	-	U	-	-	-	domain, Protein
PNEOPDPM_00709	6.19e-284	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_00713	3.11e-221	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_00714	1.6e-215	-	-	-	S	-	-	-	Domain of unknown function (DUF5119)
PNEOPDPM_00715	0.0	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_00716	1.47e-214	-	-	-	L	-	-	-	COG NOG11942 non supervised orthologous group
PNEOPDPM_00718	4.24e-134	-	-	-	-	-	-	-	-
PNEOPDPM_00719	1.87e-16	-	-	-	-	-	-	-	-
PNEOPDPM_00720	7.19e-282	-	-	-	M	-	-	-	OmpA family
PNEOPDPM_00721	2.26e-120	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
PNEOPDPM_00722	1.2e-239	-	-	-	P	ko:K07217	-	ko00000	Manganese containing catalase
PNEOPDPM_00723	1.31e-63	-	-	-	-	-	-	-	-
PNEOPDPM_00724	3.94e-41	-	-	-	S	-	-	-	Transglycosylase associated protein
PNEOPDPM_00725	0.0	-	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
PNEOPDPM_00726	0.0	amyS	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Alpha-amylase domain
PNEOPDPM_00727	4.16e-211	-	-	-	S	ko:K07058	-	ko00000	Virulence factor BrkB
PNEOPDPM_00728	1.79e-244	-	-	-	M	ko:K16052	-	ko00000,ko02000	mechanosensitive ion channel
PNEOPDPM_00729	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PNEOPDPM_00730	3.98e-159	-	-	-	T	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PNEOPDPM_00731	0.0	-	-	-	S	-	-	-	Sulfatase-modifying factor enzyme 1
PNEOPDPM_00732	1.6e-53	-	-	-	S	-	-	-	TSCPD domain
PNEOPDPM_00733	0.0	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PNEOPDPM_00734	0.0	-	-	-	G	-	-	-	Major Facilitator Superfamily
PNEOPDPM_00735	4.36e-114	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PNEOPDPM_00736	3.86e-196	ispE	2.7.1.148	-	F	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PNEOPDPM_00737	1.01e-141	-	-	-	Q	-	-	-	Methyltransferase domain
PNEOPDPM_00738	0.0	-	-	-	EU	-	-	-	Peptidase, S9A B C family, catalytic domain protein
PNEOPDPM_00739	8.46e-239	mdh	1.1.1.37	-	C	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the LDH MDH superfamily
PNEOPDPM_00740	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PNEOPDPM_00741	1.22e-125	-	-	-	S	-	-	-	Domain of unknown function (DUF3332)
PNEOPDPM_00742	0.0	-	-	-	U	-	-	-	WD40-like Beta Propeller Repeat
PNEOPDPM_00743	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00744	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Starch-binding associating with outer membrane
PNEOPDPM_00745	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PNEOPDPM_00746	0.0	-	-	-	S	ko:K06158	-	ko00000,ko03012	glycosyl transferase family 2
PNEOPDPM_00747	6.67e-282	-	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Amidohydrolase family
PNEOPDPM_00748	1.99e-283	-	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PNEOPDPM_00749	0.0	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	glucosamine-6-phosphate deaminase
PNEOPDPM_00750	4.45e-118	-	-	-	S	-	-	-	Domain of unknown function (DUF4251)
PNEOPDPM_00751	5.04e-174	comB	3.1.3.71	-	H	ko:K05979	ko00680,ko01120,map00680,map01120	ko00000,ko00001,ko00002,ko01000	2-phosphosulpholactate phosphatase
PNEOPDPM_00752	2.18e-245	-	-	-	S	ko:K22230	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Oxidoreductase NAD-binding domain protein
PNEOPDPM_00753	9.87e-317	-	-	-	S	-	-	-	Protein of unknown function (DUF3843)
PNEOPDPM_00754	9.66e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF3791)
PNEOPDPM_00755	7.13e-115	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
PNEOPDPM_00756	6.93e-49	-	-	-	-	-	-	-	-
PNEOPDPM_00757	0.0	-	-	-	N	-	-	-	Leucine rich repeats (6 copies)
PNEOPDPM_00758	4.78e-76	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
PNEOPDPM_00759	1.62e-276	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PNEOPDPM_00760	0.0	-	-	-	P	-	-	-	Carboxypeptidase regulatory-like domain
PNEOPDPM_00761	0.0	-	-	-	N	-	-	-	COG NOG06100 non supervised orthologous group
PNEOPDPM_00762	1.56e-34	-	-	-	S	-	-	-	MORN repeat variant
PNEOPDPM_00763	1.67e-99	hslR	-	-	J	ko:K04762	-	ko00000,ko03110	S4 domain protein
PNEOPDPM_00764	9.14e-159	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PNEOPDPM_00765	1.03e-132	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PNEOPDPM_00766	6.22e-210	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PNEOPDPM_00767	5.93e-302	namA	-	-	C	-	-	-	NADH:flavin oxidoreductase / NADH oxidase family
PNEOPDPM_00768	1.11e-181	-	1.3.1.22	-	S	ko:K12343	ko00140,map00140	ko00000,ko00001,ko01000	3-oxo-5-alpha-steroid 4-dehydrogenase
PNEOPDPM_00769	1.38e-127	-	-	-	-	-	-	-	-
PNEOPDPM_00770	3.76e-67	-	-	-	E	-	-	-	COG NOG19114 non supervised orthologous group
PNEOPDPM_00771	0.0	czcA	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PNEOPDPM_00772	2.16e-240	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_00773	3.55e-312	-	-	-	MU	-	-	-	outer membrane efflux protein
PNEOPDPM_00774	1.85e-144	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNEOPDPM_00775	1.08e-213	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PNEOPDPM_00776	6.66e-115	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
PNEOPDPM_00777	4.62e-163	-	-	-	K	-	-	-	FCD
PNEOPDPM_00778	0.0	-	-	-	E	-	-	-	Sodium:solute symporter family
PNEOPDPM_00779	2.27e-217	-	4.1.3.3, 4.2.1.41, 4.3.3.7	-	EM	ko:K01639,ko:K01707,ko:K01714	ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the DapA family
PNEOPDPM_00780	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_00781	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PNEOPDPM_00782	6.63e-285	-	-	-	G	-	-	-	BNR repeat-like domain
PNEOPDPM_00783	1.35e-146	-	-	-	-	-	-	-	-
PNEOPDPM_00784	2.66e-277	-	-	-	S	-	-	-	6-bladed beta-propeller
PNEOPDPM_00785	1.67e-225	-	-	-	S	-	-	-	AI-2E family transporter
PNEOPDPM_00786	0.0	-	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Glycosyl hydrolases family 35
PNEOPDPM_00787	0.0	pepO	3.4.24.71	-	O	ko:K01415,ko:K07386	-	ko00000,ko01000,ko01002,ko04147	Peptidase family M13
PNEOPDPM_00788	3.59e-285	yieG	-	-	S	ko:K06901	-	ko00000,ko02000	Permease
PNEOPDPM_00789	4.7e-179	-	-	-	S	-	-	-	Domain of unknown function (DUF5020)
PNEOPDPM_00790	1.5e-207	-	-	-	P	ko:K07301	-	ko00000,ko02000	Sodium/calcium exchanger protein
PNEOPDPM_00794	1.12e-210	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the MenA family. Type 1 subfamily
PNEOPDPM_00795	2.36e-75	-	-	-	-	-	-	-	-
PNEOPDPM_00796	4.83e-50	-	-	-	DJ	ko:K06218	-	ko00000,ko02048	nuclease activity
PNEOPDPM_00797	7.12e-206	-	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_00798	2.03e-118	thiJ	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	biosynthesis protein ThiJ
PNEOPDPM_00799	1.14e-128	-	-	-	M	-	-	-	TonB family domain protein
PNEOPDPM_00800	1.59e-76	-	-	-	U	ko:K03559	-	ko00000,ko02000	Biopolymer transporter ExbD
PNEOPDPM_00801	9.28e-158	exbB	-	-	U	ko:K03561	-	ko00000,ko02000	Transporter, MotA TolQ ExbB proton channel family protein
PNEOPDPM_00802	1.39e-174	pdxJ	2.6.99.2	-	H	ko:K03474	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PNEOPDPM_00803	1.63e-154	-	-	-	S	-	-	-	CBS domain
PNEOPDPM_00804	7.84e-207	nadK	2.7.1.23	-	H	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PNEOPDPM_00805	1.11e-101	-	-	-	-	-	-	-	-
PNEOPDPM_00807	2.49e-183	-	-	-	UW	-	-	-	Hep Hag repeat protein
PNEOPDPM_00808	3.16e-196	-	-	-	UW	-	-	-	Hep Hag repeat protein
PNEOPDPM_00809	6.59e-160	-	-	-	N	-	-	-	domain, Protein
PNEOPDPM_00811	2.05e-131	-	-	-	T	-	-	-	FHA domain protein
PNEOPDPM_00812	8.05e-278	fsr	-	-	G	ko:K08223	-	ko00000,ko02000	Major Facilitator Superfamily
PNEOPDPM_00813	0.0	-	-	-	MU	-	-	-	Outer membrane efflux protein
PNEOPDPM_00814	5.8e-224	-	-	-	M	ko:K01993	-	ko00000	Biotin-lipoyl like
PNEOPDPM_00815	1.51e-281	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PNEOPDPM_00816	1.33e-275	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PNEOPDPM_00817	0.0	-	-	-	S	-	-	-	Predicted AAA-ATPase
PNEOPDPM_00818	0.0	-	-	-	O	-	-	-	Tetratricopeptide repeat protein
PNEOPDPM_00820	7.81e-303	-	-	-	S	ko:K09003	-	ko00000	Protein of unknown function (DUF763)
PNEOPDPM_00821	8.02e-135	-	-	-	O	-	-	-	Thioredoxin
PNEOPDPM_00822	3.7e-110	-	-	-	-	-	-	-	-
PNEOPDPM_00823	1.12e-134	-	-	-	T	-	-	-	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PNEOPDPM_00824	1.19e-97	yjaB	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PNEOPDPM_00825	1.08e-27	-	-	-	S	-	-	-	GGGtGRT protein
PNEOPDPM_00826	1.61e-273	-	-	-	-	-	-	-	-
PNEOPDPM_00827	3.43e-197	ftsI	3.4.16.4	-	M	ko:K03587	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011,ko03036	Penicillin-binding protein, transpeptidase domain protein
PNEOPDPM_00832	2.09e-136	-	-	-	L	-	-	-	Phage integrase family
PNEOPDPM_00834	4.03e-99	-	-	-	L	ko:K03630	-	ko00000	RadC-like JAB domain
PNEOPDPM_00837	1.31e-207	-	-	-	-	-	-	-	-
PNEOPDPM_00838	2.65e-81	-	-	-	S	-	-	-	Protein of unknown function DUF86
PNEOPDPM_00839	2.1e-64	-	-	-	S	ko:K07075	-	ko00000	Nucleotidyltransferase domain
PNEOPDPM_00840	0.0	-	-	-	JKL	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_00841	8.07e-235	-	-	-	-	-	-	-	-
PNEOPDPM_00842	4.22e-143	-	-	-	-	-	-	-	-
PNEOPDPM_00843	3.22e-52	-	-	-	-	-	-	-	-
PNEOPDPM_00844	1.16e-284	-	-	-	L	-	-	-	Arm DNA-binding domain
PNEOPDPM_00845	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_00846	0.0	-	-	-	S	-	-	-	Endo-alpha-N-acetylgalactosaminidase
PNEOPDPM_00847	4.6e-108	-	-	-	-	-	-	-	-
PNEOPDPM_00848	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_00849	0.0	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_00850	1.54e-215	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_00851	2.57e-127	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PNEOPDPM_00852	0.0	-	-	-	E	-	-	-	Transglutaminase-like
PNEOPDPM_00857	3.94e-273	-	-	-	S	-	-	-	6-bladed beta-propeller
PNEOPDPM_00860	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
PNEOPDPM_00861	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_00864	0.0	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	DnaB-like helicase N terminal domain
PNEOPDPM_00865	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNEOPDPM_00866	3.35e-96	-	-	-	L	-	-	-	DNA-binding protein
PNEOPDPM_00867	5.71e-52	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PNEOPDPM_00868	6.13e-128	-	-	-	NU	ko:K02395	-	ko00000,ko02035	amidase activity
PNEOPDPM_00870	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase C-terminal domain
PNEOPDPM_00871	8.76e-176	-	-	-	S	-	-	-	ABC-type sugar transport system, auxiliary component
PNEOPDPM_00872	0.0	-	-	-	G	-	-	-	beta-fructofuranosidase activity
PNEOPDPM_00873	0.0	-	-	-	Q	-	-	-	FAD dependent oxidoreductase
PNEOPDPM_00874	0.0	-	-	-	Q	-	-	-	COG NOG08355 non supervised orthologous group
PNEOPDPM_00875	0.0	-	-	-	Q	-	-	-	FAD dependent oxidoreductase
PNEOPDPM_00876	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_00877	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_00878	2.04e-223	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_00879	1.08e-139	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_00880	1.27e-314	fucA	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PNEOPDPM_00881	0.0	-	-	-	M	-	-	-	Tricorn protease homolog
PNEOPDPM_00882	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_00883	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_00884	1.83e-233	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_00885	2.39e-121	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_00886	4.09e-221	cysK	2.5.1.47	-	E	ko:K01738,ko:K12339	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PNEOPDPM_00887	5.58e-99	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PNEOPDPM_00888	1.12e-302	-	-	-	MU	-	-	-	Outer membrane efflux protein
PNEOPDPM_00889	3.51e-52	-	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	Auxiliary transport protein, membrane fusion protein (MFP) family protein
PNEOPDPM_00890	7.76e-144	-	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	Barrel-sandwich domain of CusB or HlyD membrane-fusion
PNEOPDPM_00891	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PNEOPDPM_00892	7.41e-145	narL	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PNEOPDPM_00893	8.12e-302	-	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Cys/Met metabolism PLP-dependent enzyme
PNEOPDPM_00894	2.63e-195	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PNEOPDPM_00895	1.75e-134	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PNEOPDPM_00896	1.2e-162	-	-	-	S	-	-	-	Protein of unknown function (DUF2490)
PNEOPDPM_00897	3.52e-153	yhhQ	-	-	U	ko:K09125	-	ko00000	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PNEOPDPM_00898	1.83e-233	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PNEOPDPM_00899	4.22e-148	yihX	3.1.3.10	-	S	ko:K07025,ko:K20866	ko00010,ko01120,map00010,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PNEOPDPM_00900	0.0	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PNEOPDPM_00901	2.35e-173	ydcV	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PNEOPDPM_00902	8.28e-176	-	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PNEOPDPM_00903	0.0	potA	3.6.3.29, 3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K02017,ko:K10112,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PNEOPDPM_00904	2.36e-270	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Uracil transporter
PNEOPDPM_00905	7.58e-128	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PNEOPDPM_00906	2.48e-224	-	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Glycosyltransferase
PNEOPDPM_00907	1.2e-83	-	-	-	S	-	-	-	GtrA-like protein
PNEOPDPM_00908	3.14e-177	-	-	-	-	-	-	-	-
PNEOPDPM_00909	2.6e-233	glcU	-	-	G	ko:K05340	-	ko00000,ko02000	Sugar transport protein
PNEOPDPM_00910	1.22e-249	-	-	-	F	-	-	-	Inosine-uridine preferring nucleoside hydrolase
PNEOPDPM_00911	0.0	-	-	-	O	-	-	-	ADP-ribosylglycohydrolase
PNEOPDPM_00912	8.82e-213	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PNEOPDPM_00913	0.0	-	-	-	S	-	-	-	radical SAM domain protein
PNEOPDPM_00914	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
PNEOPDPM_00915	0.0	-	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
PNEOPDPM_00916	2.01e-270	-	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
PNEOPDPM_00917	1.05e-291	gluP	-	-	G	ko:K02429	-	ko00000,ko02000	Major Facilitator
PNEOPDPM_00918	4.5e-281	galK	2.7.1.6	-	G	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GHMP kinase family. GalK subfamily
PNEOPDPM_00919	2.81e-165	-	-	-	F	-	-	-	NUDIX domain
PNEOPDPM_00920	0.0	tkt	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the transketolase family
PNEOPDPM_00921	5.85e-104	rpiB	5.3.1.6	-	G	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase
PNEOPDPM_00922	0.0	-	4.1.1.3, 6.4.1.1	-	C	ko:K01571,ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko02000	Conserved carboxylase domain
PNEOPDPM_00923	0.0	-	-	-	H	-	-	-	Mo-molybdopterin cofactor metabolic process
PNEOPDPM_00924	0.0	-	-	-	P	-	-	-	Carboxypeptidase regulatory-like domain
PNEOPDPM_00925	2.83e-152	-	-	-	-	-	-	-	-
PNEOPDPM_00926	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
PNEOPDPM_00927	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	TonB dependent receptor
PNEOPDPM_00928	7.37e-222	cysD	2.7.7.4	-	H	ko:K00957	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase
PNEOPDPM_00929	0.0	cysN	2.7.1.25, 2.7.7.4	-	P	ko:K00955,ko:K00956	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily
PNEOPDPM_00930	9.71e-278	-	-	-	S	-	-	-	Sulfotransferase family
PNEOPDPM_00931	5.49e-237	-	-	-	S	-	-	-	Putative carbohydrate metabolism domain
PNEOPDPM_00932	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PNEOPDPM_00933	1.77e-124	-	-	-	-	-	-	-	-
PNEOPDPM_00934	7.85e-210	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PNEOPDPM_00936	0.0	-	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
PNEOPDPM_00937	0.0	-	2.3.1.54, 4.1.1.83	-	C	ko:K00656,ko:K18427	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
PNEOPDPM_00938	7.37e-222	-	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	4Fe-4S single cluster domain
PNEOPDPM_00939	6.48e-211	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PNEOPDPM_00940	1.2e-237	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_00941	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PNEOPDPM_00942	4.42e-290	-	-	-	MU	-	-	-	Outer membrane efflux protein
PNEOPDPM_00943	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PNEOPDPM_00944	2.97e-212	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
PNEOPDPM_00945	5.32e-108	-	-	-	G	-	-	-	YhcH YjgK YiaL family protein
PNEOPDPM_00946	0.0	copA	3.6.3.4, 3.6.3.54	-	P	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	Copper-exporting ATPase
PNEOPDPM_00947	4.86e-41	-	-	-	P	-	-	-	mercury ion transmembrane transporter activity
PNEOPDPM_00948	9.12e-161	hly-III	-	-	S	ko:K11068	-	ko00000,ko02042	Haemolysin-III related
PNEOPDPM_00949	9.47e-317	tldD3	-	-	S	ko:K03592	-	ko00000,ko01002	Putative modulator of DNA gyrase
PNEOPDPM_00950	0.0	tldD1	-	-	S	ko:K03568	-	ko00000,ko01002	Putative modulator of DNA gyrase
PNEOPDPM_00951	0.0	atsB	-	-	C	ko:K06871	-	ko00000	oxidizes both cysteine and serine residues to C-alpha-formylglycine in sulfatase enzyme protein substrates
PNEOPDPM_00952	7.06e-249	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
PNEOPDPM_00953	8.43e-198	-	-	-	S	-	-	-	COG NOG24904 non supervised orthologous group
PNEOPDPM_00954	8.19e-267	sucC	6.2.1.5	-	C	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PNEOPDPM_00955	1.77e-201	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PNEOPDPM_00956	0.0	-	-	-	E	-	-	-	COG COG2755 Lysophospholipase L1 and related esterases
PNEOPDPM_00957	0.0	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PNEOPDPM_00958	0.0	algI	-	-	M	-	-	-	alginate O-acetyltransferase
PNEOPDPM_00959	0.0	-	-	-	M	-	-	-	Gram-negative bacterial TonB protein C-terminal
PNEOPDPM_00960	9.57e-304	ybdG_2	-	-	M	ko:K16053	-	ko00000,ko02000	Mechanosensitive ion channel
PNEOPDPM_00961	4.47e-276	ybdG_1	-	-	M	ko:K16053	-	ko00000,ko02000	Mechanosensitive ion channel
PNEOPDPM_00962	0.0	-	-	-	S	-	-	-	Insulinase (Peptidase family M16)
PNEOPDPM_00963	1.2e-109	-	-	-	S	-	-	-	Domain of unknown function (DUF4268)
PNEOPDPM_00964	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Peptidase family M1 domain
PNEOPDPM_00965	3.28e-195	hisG	2.4.2.17	-	F	ko:K00765	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	ATP phosphoribosyltransferase
PNEOPDPM_00966	2.33e-299	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PNEOPDPM_00967	1.95e-249	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PNEOPDPM_00968	2.31e-280	hisB	3.1.3.15, 4.2.1.19	-	E	ko:K01089,ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidine biosynthesis bifunctional protein HisB
PNEOPDPM_00969	6.88e-89	-	-	-	S	-	-	-	Lipocalin-like domain
PNEOPDPM_00971	3.31e-106	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PNEOPDPM_00972	0.0	yhgF	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain
PNEOPDPM_00973	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
PNEOPDPM_00974	2.77e-307	ssuB	3.6.3.29	-	P	ko:K02017,ko:K02049,ko:K02050,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	anion transmembrane transporter activity
PNEOPDPM_00975	2.46e-217	-	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PNEOPDPM_00976	0.0	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PNEOPDPM_00978	1.97e-92	-	-	-	S	-	-	-	ACT domain protein
PNEOPDPM_00979	0.0	paaK	6.2.1.30	-	H	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	ko00000,ko00001,ko01000	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PNEOPDPM_00980	0.0	-	-	-	T	-	-	-	Histidine kinase-like ATPases
PNEOPDPM_00981	2.9e-128	yajL	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	Thiamine biosynthesis protein ThiJ
PNEOPDPM_00982	0.0	guaD	3.5.4.3	-	F	ko:K01487	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
PNEOPDPM_00983	1.43e-225	-	-	-	C	-	-	-	4Fe-4S binding domain
PNEOPDPM_00984	2.54e-46	-	-	-	S	-	-	-	Putative prokaryotic signal transducing protein
PNEOPDPM_00987	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Efflux ABC transporter, permease protein
PNEOPDPM_00988	2.09e-143	-	-	-	L	-	-	-	DNA-binding protein
PNEOPDPM_00989	3.88e-193	-	-	-	S	-	-	-	Protein of unknown function (DUF5131)
PNEOPDPM_00990	0.0	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_00991	0.0	-	-	-	F	-	-	-	SusD family
PNEOPDPM_00992	1.2e-106	-	-	-	-	-	-	-	-
PNEOPDPM_00993	5.62e-314	-	-	-	S	-	-	-	Domain of unknown function (DUF5103)
PNEOPDPM_00994	0.0	nqrA	1.6.5.8	-	C	ko:K00346	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PNEOPDPM_00995	1.15e-280	nqrB	1.6.5.8	-	C	ko:K00347	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PNEOPDPM_00996	4.33e-191	nqrC	1.6.5.8	-	C	ko:K00348	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PNEOPDPM_00997	3.64e-134	nqrD	1.6.5.8	-	C	ko:K00349	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PNEOPDPM_00998	4.01e-139	nqrE	1.6.5.8	-	C	ko:K00350	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PNEOPDPM_00999	0.0	nqrF	1.6.5.8	-	C	ko:K00351	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway
PNEOPDPM_01002	3.08e-107	-	-	-	V	-	-	-	Type I restriction enzyme R protein N terminus (HSDR_N)
PNEOPDPM_01003	3.16e-185	amn	3.2.2.4	-	F	ko:K01241	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
PNEOPDPM_01004	1.25e-239	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PNEOPDPM_01005	2.41e-124	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNEOPDPM_01006	7.21e-192	pyrK	-	-	C	ko:K02823	ko00240,ko01100,map00240,map01100	ko00000,ko00001	Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(
PNEOPDPM_01007	1.04e-217	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PNEOPDPM_01008	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Glycosyl hydrolase family 36 C-terminal domain
PNEOPDPM_01009	1.16e-264	ynfM	-	-	EGP	ko:K08224	-	ko00000,ko02000	Major Facilitator Superfamily
PNEOPDPM_01010	1.61e-157	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
PNEOPDPM_01011	1.5e-106	-	-	-	S	-	-	-	Putative redox-active protein (C_GCAxxG_C_C)
PNEOPDPM_01012	9.45e-67	-	-	-	S	-	-	-	Stress responsive
PNEOPDPM_01013	7.68e-288	serB	3.1.3.3	-	ET	ko:K01079	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01009	phosphoserine phosphatase
PNEOPDPM_01014	1.91e-189	-	-	-	M	-	-	-	YoaP-like
PNEOPDPM_01015	1.48e-145	-	-	-	S	-	-	-	GrpB protein
PNEOPDPM_01016	2.9e-95	-	-	-	E	-	-	-	lactoylglutathione lyase activity
PNEOPDPM_01017	7.05e-216	-	-	-	CH	-	-	-	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PNEOPDPM_01018	1.12e-140	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PNEOPDPM_01019	1.55e-178	nadX	1.4.1.21	-	S	ko:K06989	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Domain of unknown function DUF108
PNEOPDPM_01021	2.73e-115	-	-	-	S	-	-	-	Protein of unknown function (DUF3795)
PNEOPDPM_01022	1.35e-93	-	-	-	S	-	-	-	Protein of unknown function (DUF3788)
PNEOPDPM_01023	4.08e-78	-	-	-	O	-	-	-	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PNEOPDPM_01024	2.64e-67	-	-	-	S	ko:K19166	-	ko00000,ko01000,ko02048	HigB_toxin, RelE-like toxic component of a toxin-antitoxin system
PNEOPDPM_01025	7.94e-78	-	-	-	K	ko:K18831	-	ko00000,ko02048,ko03000	Helix-turn-helix
PNEOPDPM_01026	2.91e-99	-	-	-	K	-	-	-	stress protein (general stress protein 26)
PNEOPDPM_01027	3.26e-225	-	-	-	K	-	-	-	helix_turn_helix, Deoxyribose operon repressor
PNEOPDPM_01028	3.16e-82	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PNEOPDPM_01029	1.15e-121	-	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PNEOPDPM_01030	6.47e-213	-	-	-	EG	-	-	-	EamA-like transporter family
PNEOPDPM_01031	8.68e-106	-	-	-	K	-	-	-	helix_turn_helix ASNC type
PNEOPDPM_01032	7.27e-56	-	-	-	-	-	-	-	-
PNEOPDPM_01033	0.0	-	-	-	M	-	-	-	metallophosphoesterase
PNEOPDPM_01034	1.3e-174	-	-	-	S	-	-	-	CDGSH-type zinc finger. Function unknown.
PNEOPDPM_01035	1.16e-97	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase like
PNEOPDPM_01036	2.63e-203	-	-	-	K	-	-	-	Helix-turn-helix domain
PNEOPDPM_01037	5.72e-66	-	-	-	S	-	-	-	Putative zinc ribbon domain
PNEOPDPM_01038	4.31e-230	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PNEOPDPM_01040	1.09e-277	-	-	-	S	-	-	-	Domain of unknown function (DUF1887)
PNEOPDPM_01041	3.02e-293	corC_1	-	-	P	ko:K03699	-	ko00000,ko02042	Transporter associated domain
PNEOPDPM_01042	5.8e-137	-	-	-	T	-	-	-	Cyclic nucleotide-binding domain
PNEOPDPM_01045	8.44e-201	-	-	-	-	-	-	-	-
PNEOPDPM_01046	1.68e-156	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems NAD-binding component
PNEOPDPM_01047	0.0	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	COG0168 Trk-type K transport systems, membrane components
PNEOPDPM_01048	6.13e-177	-	-	-	F	-	-	-	NUDIX domain
PNEOPDPM_01049	0.0	xylB_2	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	FGGY family of carbohydrate kinases, N-terminal domain
PNEOPDPM_01050	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Xylose isomerase
PNEOPDPM_01051	0.0	-	-	-	EGP	ko:K08138	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PNEOPDPM_01052	0.0	-	-	-	K	-	-	-	Helix-turn-helix domain
PNEOPDPM_01053	2.19e-67	-	-	-	S	-	-	-	Nucleotidyltransferase domain
PNEOPDPM_01054	0.0	-	-	-	S	-	-	-	Predicted AAA-ATPase
PNEOPDPM_01057	3.24e-57	-	-	-	S	-	-	-	The GLUG motif
PNEOPDPM_01058	5.29e-83	-	-	-	S	ko:K02014	-	ko00000,ko02000	cell adhesion involved in biofilm formation
PNEOPDPM_01059	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PNEOPDPM_01060	0.0	-	-	-	S	ko:K02014	-	ko00000,ko02000	cell adhesion involved in biofilm formation
PNEOPDPM_01061	7.49e-236	-	-	-	L	-	-	-	Domain of unknown function (DUF1848)
PNEOPDPM_01062	4.82e-183	mtgA	2.4.1.129	GT51	M	ko:K03814	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PNEOPDPM_01063	5.49e-163	lipB	2.3.1.181	-	H	ko:K03801	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate
PNEOPDPM_01064	2.31e-229	dus	-	-	H	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PNEOPDPM_01065	0.0	-	-	-	S	-	-	-	TamB, inner membrane protein subunit of TAM complex
PNEOPDPM_01066	8.86e-244	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PNEOPDPM_01067	6.03e-109	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PNEOPDPM_01068	2.85e-115	-	-	-	T	-	-	-	Cyclic nucleotide-binding domain
PNEOPDPM_01069	1.14e-311	-	-	-	V	-	-	-	MatE
PNEOPDPM_01070	0.0	-	-	-	E	-	-	-	N-terminus of Esterase_SGNH_hydro-type
PNEOPDPM_01071	0.0	-	3.2.1.20	GH31	M	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl-hydrolase 97 C-terminal, oligomerisation
PNEOPDPM_01072	1.11e-106	-	-	-	K	-	-	-	This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PNEOPDPM_01073	0.0	-	-	-	HJ	-	-	-	Belongs to the D-alanine--D-alanine ligase family
PNEOPDPM_01075	1.56e-230	-	-	-	L	-	-	-	COG NOG11942 non supervised orthologous group
PNEOPDPM_01076	0.0	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_01077	5.63e-226	-	-	-	S	-	-	-	Domain of unknown function (DUF5119)
PNEOPDPM_01078	1.96e-223	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_01080	2.26e-05	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_01081	1.06e-277	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_01084	1.4e-58	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_01086	7.79e-92	-	-	-	L	-	-	-	DNA-binding protein
PNEOPDPM_01087	1.78e-38	-	-	-	-	-	-	-	-
PNEOPDPM_01088	2.73e-203	-	-	-	S	-	-	-	Peptidase M15
PNEOPDPM_01090	8.46e-285	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_01093	3.32e-241	-	-	-	-	-	-	-	-
PNEOPDPM_01095	8.85e-111	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_01098	1.77e-236	-	-	-	-	-	-	-	-
PNEOPDPM_01100	9.43e-316	-	-	-	L	-	-	-	Phage integrase SAM-like domain
PNEOPDPM_01103	6.4e-65	-	-	-	-	-	-	-	-
PNEOPDPM_01104	5.63e-253	-	-	-	T	-	-	-	AAA domain
PNEOPDPM_01105	6.1e-143	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PNEOPDPM_01106	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PNEOPDPM_01107	2.67e-232	-	-	-	S	-	-	-	Tetratricopeptide repeat
PNEOPDPM_01108	7.76e-72	-	-	-	I	-	-	-	Biotin-requiring enzyme
PNEOPDPM_01109	0.0	-	-	-	I	-	-	-	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PNEOPDPM_01110	5e-130	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PNEOPDPM_01111	9.64e-100	ruvX	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PNEOPDPM_01112	0.0	wcaJ_2	2.7.8.6	-	M	ko:K00996,ko:K03606	ko05111,map05111	ko00000,ko00001,ko01000,ko01005	CoA-binding domain
PNEOPDPM_01113	1.97e-278	-	-	-	M	-	-	-	membrane
PNEOPDPM_01114	2.14e-280	gmd	4.2.1.47	-	M	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PNEOPDPM_01115	1.47e-267	fcl	1.1.1.271	-	GM	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PNEOPDPM_01116	6e-211	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PNEOPDPM_01117	2.09e-130	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
PNEOPDPM_01118	0.0	-	-	-	S	-	-	-	Peptide transporter
PNEOPDPM_01119	0.0	lytB	-	-	D	ko:K06381	-	ko00000	Stage II sporulation protein
PNEOPDPM_01120	0.0	-	-	-	E	-	-	-	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PNEOPDPM_01121	2.44e-142	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PNEOPDPM_01124	1.5e-101	-	-	-	FG	-	-	-	HIT domain
PNEOPDPM_01125	0.0	-	-	-	P	ko:K16089	-	ko00000,ko02000	TonB-dependent receptor
PNEOPDPM_01126	2.25e-43	-	-	-	-	-	-	-	-
PNEOPDPM_01127	0.0	-	-	-	C	-	-	-	Domain of unknown function (DUF4132)
PNEOPDPM_01128	0.0	molR	3.4.24.3	-	C	ko:K01387	-	ko00000,ko01000,ko01002,ko02042	deoxyhypusine monooxygenase activity
PNEOPDPM_01129	1.62e-256	-	-	-	S	-	-	-	AAA domain (dynein-related subfamily)
PNEOPDPM_01130	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01131	1.49e-273	-	-	-	S	-	-	-	VWA domain containing CoxE-like protein
PNEOPDPM_01132	0.0	yehQ	-	-	S	-	-	-	zinc ion binding
PNEOPDPM_01133	7.11e-57	-	-	-	-	-	-	-	-
PNEOPDPM_01134	0.0	maeB	1.1.1.38, 1.1.1.40	-	C	ko:K00027,ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020	ko00000,ko00001,ko00002,ko01000	Malic enzyme
PNEOPDPM_01135	6.93e-96	mip	5.2.1.8	-	O	ko:K01802	-	ko00000,ko01000	FKBP-type peptidyl-prolyl cis-trans isomerase
PNEOPDPM_01136	0.0	-	-	-	M	-	-	-	Outer membrane efflux protein
PNEOPDPM_01137	4.62e-253	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_01138	0.0	bpeF	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PNEOPDPM_01139	0.0	-	-	-	K	-	-	-	Putative DNA-binding domain
PNEOPDPM_01140	0.0	katA	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Belongs to the catalase family
PNEOPDPM_01141	2.68e-278	romA	-	-	S	-	-	-	Beta-lactamase superfamily domain
PNEOPDPM_01142	5.77e-81	-	-	-	S	ko:K09790	-	ko00000	Protein of unknown function (DUF454)
PNEOPDPM_01143	5.71e-237	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PNEOPDPM_01144	0.0	-	-	-	P	ko:K03281	-	ko00000	Chloride channel protein
PNEOPDPM_01145	0.0	-	-	-	M	-	-	-	sugar transferase
PNEOPDPM_01146	7.66e-130	rimN	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Belongs to the SUA5 family
PNEOPDPM_01147	0.0	-	-	-	S	-	-	-	Predicted AAA-ATPase
PNEOPDPM_01148	1.35e-13	-	-	-	S	-	-	-	Predicted AAA-ATPase
PNEOPDPM_01149	2.44e-304	-	-	-	L	-	-	-	Phage integrase SAM-like domain
PNEOPDPM_01150	1.27e-143	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_01151	0.0	-	-	-	M	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3868)
PNEOPDPM_01152	2.21e-227	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PNEOPDPM_01153	9.11e-117	-	-	-	-	-	-	-	-
PNEOPDPM_01154	3.99e-179	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
PNEOPDPM_01156	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01157	1.97e-63	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_01158	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	single-stranded-DNA-specific exonuclease RecJ
PNEOPDPM_01159	0.0	recQ2	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PNEOPDPM_01160	3.14e-312	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PNEOPDPM_01161	1.85e-301	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PNEOPDPM_01162	1.98e-232	-	-	-	S	-	-	-	Trehalose utilisation
PNEOPDPM_01163	2.36e-289	-	-	-	CO	-	-	-	amine dehydrogenase activity
PNEOPDPM_01164	1.75e-169	-	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
PNEOPDPM_01165	0.0	-	-	-	E	ko:K03294	-	ko00000	C-terminus of AA_permease
PNEOPDPM_01166	7.74e-86	-	-	-	S	-	-	-	GtrA-like protein
PNEOPDPM_01167	2.69e-168	-	-	-	KT	-	-	-	LytTr DNA-binding domain
PNEOPDPM_01168	9.52e-242	-	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_01169	7.47e-259	-	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_01170	7.96e-221	-	-	-	-	-	-	-	-
PNEOPDPM_01171	6.12e-182	-	-	-	T	ko:K02477	-	ko00000,ko02022	LytTr DNA-binding domain
PNEOPDPM_01172	3.33e-242	-	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_01173	2.94e-205	-	-	-	M	ko:K15727	-	ko00000,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_01174	0.0	czcA	-	-	P	ko:K15726	-	ko00000,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PNEOPDPM_01176	4e-210	-	-	-	L	-	-	-	Protein of unknown function (DUF3987)
PNEOPDPM_01177	2.96e-37	-	-	-	L	-	-	-	Protein of unknown function (DUF3987)
PNEOPDPM_01178	9.51e-28	-	-	-	-	-	-	-	-
PNEOPDPM_01179	1.03e-210	ddh	1.4.1.16	-	E	ko:K03340	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
PNEOPDPM_01180	1.81e-221	lgt	-	-	M	-	-	-	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PNEOPDPM_01181	4.12e-297	fprA	1.6.3.4	-	C	ko:K22405	-	ko00000,ko01000	Metallo-beta-lactamase domain protein
PNEOPDPM_01182	2.94e-196	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PNEOPDPM_01183	0.0	-	-	-	S	-	-	-	PQQ-like domain
PNEOPDPM_01184	3.45e-138	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
PNEOPDPM_01185	1.78e-272	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PNEOPDPM_01186	3.56e-56	-	-	-	O	-	-	-	Tetratricopeptide repeat
PNEOPDPM_01187	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PNEOPDPM_01188	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PNEOPDPM_01189	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01190	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01191	6.83e-143	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_01192	0.0	-	-	-	M	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3868)
PNEOPDPM_01193	0.0	-	-	-	S	-	-	-	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PNEOPDPM_01194	1.63e-234	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PNEOPDPM_01195	4.99e-53	hupB	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PNEOPDPM_01196	5.66e-168	-	3.4.21.105	-	S	ko:K09650	-	ko00000,ko01000,ko01002,ko03029	membrane
PNEOPDPM_01197	4e-202	-	-	-	S	-	-	-	Rhomboid family
PNEOPDPM_01198	9.24e-269	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family protein
PNEOPDPM_01199	1.32e-132	-	-	-	S	-	-	-	Domain of unknown function (DUF4468) with TBP-like fold
PNEOPDPM_01200	1.21e-244	-	-	-	S	ko:K03646	-	ko00000,ko02000	Domain of unknown function (DUF4468) with TBP-like fold
PNEOPDPM_01201	0.0	secD	-	-	U	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PNEOPDPM_01202	0.0	hutU	4.2.1.49	-	E	ko:K01712	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PNEOPDPM_01203	2.86e-214	ftcD	2.1.2.5, 4.3.1.4	-	E	ko:K00603,ko:K13990	ko00340,ko00670,ko01100,map00340,map00670,map01100	ko00000,ko00001,ko01000,ko03036,ko04147	Glutamate formiminotransferase
PNEOPDPM_01204	4.04e-304	hutI	3.5.2.7	-	Q	ko:K01468	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Imidazolone-5-propionate hydrolase
PNEOPDPM_01205	5.02e-134	fchA	-	-	E	-	-	-	Methenyltetrahydrofolate cyclohydrolase
PNEOPDPM_01206	0.0	hutH	4.3.1.3	-	E	ko:K01745	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Histidine ammonia-lyase
PNEOPDPM_01207	9.18e-137	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PNEOPDPM_01208	2.53e-264	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_01209	0.0	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_01210	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PNEOPDPM_01211	0.0	-	3.2.1.24	GH38	G	ko:K01191	ko00511,map00511	ko00000,ko00001,ko01000,ko04131	Alpha mannosidase, middle domain
PNEOPDPM_01212	1.45e-315	-	-	-	S	-	-	-	Tetratricopeptide repeat
PNEOPDPM_01213	1.53e-70	-	-	-	-	-	-	-	-
PNEOPDPM_01214	1.09e-292	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
PNEOPDPM_01215	3.3e-166	-	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PNEOPDPM_01216	2.51e-103	-	-	-	S	-	-	-	Domain of unknown function DUF302
PNEOPDPM_01217	1.61e-125	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PNEOPDPM_01218	4.72e-301	-	-	-	S	-	-	-	Outer membrane protein beta-barrel domain
PNEOPDPM_01219	1.36e-139	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PNEOPDPM_01221	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
PNEOPDPM_01223	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PNEOPDPM_01224	4e-258	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PNEOPDPM_01225	6.43e-191	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PNEOPDPM_01226	0.0	-	-	-	P	-	-	-	Parallel beta-helix repeats
PNEOPDPM_01227	1.68e-165	-	-	-	KT	-	-	-	LytTr DNA-binding domain
PNEOPDPM_01228	8.02e-255	ypdA_4	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_01229	7.34e-249	-	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_01230	0.0	-	-	-	P	-	-	-	Carboxypeptidase regulatory-like domain
PNEOPDPM_01231	8.08e-40	-	-	-	-	-	-	-	-
PNEOPDPM_01233	3.06e-157	-	-	-	S	-	-	-	Domain of unknown function (DUF4136)
PNEOPDPM_01234	1.16e-154	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
PNEOPDPM_01235	2.62e-239	-	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_01236	4.85e-185	-	-	-	KT	-	-	-	LytTr DNA-binding domain
PNEOPDPM_01237	1.09e-124	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PNEOPDPM_01238	4.89e-238	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PNEOPDPM_01239	0.0	-	-	-	P	-	-	-	Carboxypeptidase regulatory-like domain
PNEOPDPM_01240	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01241	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01242	1.43e-222	oxyR	-	-	K	ko:K04761	ko02026,map02026	ko00000,ko00001,ko03000	Transcriptional regulator
PNEOPDPM_01243	3.05e-199	pheA	4.2.1.51	-	E	ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydratase
PNEOPDPM_01244	3.83e-301	dapL	2.6.1.83	-	E	ko:K10206,ko:K14261	ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class I and II
PNEOPDPM_01245	8.72e-259	pheB	5.4.99.5	-	E	ko:K04516	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Cytochrome C4
PNEOPDPM_01246	5.9e-185	tyrA	1.3.1.12	-	E	ko:K00210	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydrogenase
PNEOPDPM_01247	0.0	-	-	-	S	ko:K07079	-	ko00000	Aldo/keto reductase family
PNEOPDPM_01248	0.0	yccM	-	-	C	-	-	-	4Fe-4S binding domain
PNEOPDPM_01249	3.03e-179	-	-	-	T	-	-	-	LytTr DNA-binding domain
PNEOPDPM_01250	5.94e-238	-	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_01251	0.0	-	-	-	M	-	-	-	Gram-negative bacterial TonB protein C-terminal
PNEOPDPM_01252	4.83e-256	-	-	-	M	ko:K03832	-	ko00000,ko02000	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PNEOPDPM_01253	0.0	-	-	-	M	ko:K03832	-	ko00000,ko02000	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PNEOPDPM_01254	0.0	-	-	-	E	ko:K06978	-	ko00000	serine-type peptidase activity
PNEOPDPM_01255	0.0	-	-	-	P	-	-	-	Domain of unknown function (DUF4976)
PNEOPDPM_01256	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	C-terminal region of aryl-sulfatase
PNEOPDPM_01257	0.0	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	DNA topoisomerase III
PNEOPDPM_01258	4.11e-71	-	-	-	S	-	-	-	Plasmid stabilization system
PNEOPDPM_01260	3e-118	-	-	-	I	-	-	-	NUDIX domain
PNEOPDPM_01261	0.0	-	-	-	S	-	-	-	Peptidase C10 family
PNEOPDPM_01263	3.69e-183	-	-	-	T	ko:K02477	-	ko00000,ko02022	COG3279 Response regulator of the LytR AlgR family
PNEOPDPM_01264	0.0	-	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_01265	0.0	glmM	5.4.2.8	-	G	ko:K01840	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucosamine mutase
PNEOPDPM_01266	1.73e-139	-	-	-	S	-	-	-	Domain of unknown function (DUF4827)
PNEOPDPM_01267	4.48e-258	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	domain protein
PNEOPDPM_01268	1.7e-297	-	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	ComEC Rec2-related protein
PNEOPDPM_01269	1.24e-152	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PNEOPDPM_01271	2.44e-136	rpoE	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PNEOPDPM_01272	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01274	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PNEOPDPM_01275	0.0	-	-	-	I	-	-	-	Outer membrane protein transport protein, Ompp1 FadL TodX
PNEOPDPM_01276	1.05e-88	-	-	-	S	-	-	-	Psort location OuterMembrane, score
PNEOPDPM_01278	1.24e-302	LYS1	1.5.1.7	-	E	ko:K00290	ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Saccharopine dehydrogenase
PNEOPDPM_01279	1.46e-106	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	Thiol peroxidase
PNEOPDPM_01280	4.94e-245	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PNEOPDPM_01281	8.74e-263	-	-	-	V	-	-	-	Acetyltransferase (GNAT) domain
PNEOPDPM_01282	0.0	-	-	-	G	-	-	-	polysaccharide deacetylase
PNEOPDPM_01283	3.33e-266	-	5.1.3.23	-	M	ko:K13019	ko00520,map00520	ko00000,ko00001,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PNEOPDPM_01284	2.25e-305	-	-	-	M	-	-	-	Glycosyltransferase Family 4
PNEOPDPM_01285	8.07e-282	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PNEOPDPM_01286	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01287	1.22e-88	folK2	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PNEOPDPM_01288	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
PNEOPDPM_01290	1.19e-156	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
PNEOPDPM_01291	0.0	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_01292	1.04e-304	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_01293	3.99e-157	-	-	-	S	-	-	-	COG0110 Acetyltransferase (isoleucine patch superfamily)
PNEOPDPM_01294	2.48e-277	-	-	-	M	-	-	-	Domain of unknown function (DUF1972)
PNEOPDPM_01295	2.14e-259	-	-	GT4	M	ko:K00754	-	ko00000,ko01000	Glycosyltransferase Family 4
PNEOPDPM_01296	5.98e-158	-	-	-	S	-	-	-	Bacterial transferase hexapeptide repeat protein
PNEOPDPM_01297	5.05e-187	-	-	GT2	S	ko:K13002	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferase family 2
PNEOPDPM_01298	8.33e-294	-	-	-	-	-	-	-	-
PNEOPDPM_01299	0.0	-	-	-	M	-	-	-	Chain length determinant protein
PNEOPDPM_01300	4.28e-190	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	Polysaccharide biosynthesis/export protein
PNEOPDPM_01301	3.74e-206	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
PNEOPDPM_01302	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PNEOPDPM_01303	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeats
PNEOPDPM_01304	3.68e-229	-	-	-	K	ko:K13652	-	ko00000,ko03000	Bacterial transcription activator, effector binding domain
PNEOPDPM_01305	9.67e-155	kpsD	-	-	M	-	-	-	Polysaccharide biosynthesis/export protein
PNEOPDPM_01306	2.72e-261	-	-	-	M	-	-	-	Chain length determinant protein
PNEOPDPM_01308	7.82e-97	-	-	-	-	-	-	-	-
PNEOPDPM_01310	7.91e-70	-	-	-	S	-	-	-	MerR HTH family regulatory protein
PNEOPDPM_01311	1.23e-202	dnaJ2	-	-	O	ko:K03686,ko:K05516	-	ko00000,ko03029,ko03036,ko03110	DnaJ molecular chaperone homology domain
PNEOPDPM_01313	9.93e-136	qacR	-	-	K	-	-	-	tetR family
PNEOPDPM_01314	5.67e-232	-	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
PNEOPDPM_01315	3e-169	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PNEOPDPM_01316	3.72e-167	rluC	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Pseudouridine synthase
PNEOPDPM_01317	2.95e-209	-	-	-	EG	-	-	-	membrane
PNEOPDPM_01318	1.39e-258	fbaB	4.1.2.13	-	G	ko:K11645	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	DeoC/LacD family aldolase
PNEOPDPM_01319	3.98e-135	rbr3A	-	-	C	-	-	-	Rubrerythrin
PNEOPDPM_01321	1.33e-181	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PNEOPDPM_01322	6.17e-158	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
PNEOPDPM_01323	1.44e-187	trpC	4.1.1.48	-	E	ko:K01609	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
PNEOPDPM_01324	3.44e-237	trpD	2.4.2.18, 4.1.3.27	-	E	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PNEOPDPM_01325	2.67e-136	trpG	2.6.1.85, 4.1.3.27	-	EH	ko:K01658,ko:K01664	ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Glutamine amidotransferase class-I
PNEOPDPM_01326	0.0	trpE	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Anthranilate synthase component I, N terminal region
PNEOPDPM_01327	3.5e-292	trpB	4.2.1.20, 5.3.1.24	-	E	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PNEOPDPM_01328	5.33e-287	-	-	-	J	-	-	-	(SAM)-dependent
PNEOPDPM_01329	1.36e-112	-	1.8.5.2	-	S	ko:K16937	ko00920,ko01120,map00920,map01120	ko00000,ko00001,ko01000	DoxX
PNEOPDPM_01330	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PNEOPDPM_01331	0.0	-	-	-	P	ko:K07085	-	ko00000	TrkA C-terminal domain protein
PNEOPDPM_01332	2.7e-282	-	3.1.3.97	-	G	ko:K07053	-	ko00000,ko01000	DNA polymerase alpha chain like domain
PNEOPDPM_01333	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01334	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_01335	7.6e-309	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PNEOPDPM_01336	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
PNEOPDPM_01337	0.0	-	-	-	S	-	-	-	Sulfatase-modifying factor enzyme 1
PNEOPDPM_01338	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01339	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_01340	0.0	-	-	-	T	-	-	-	helix_turn_helix, arabinose operon control protein
PNEOPDPM_01341	9.05e-93	-	-	-	L	-	-	-	regulation of translation
PNEOPDPM_01343	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Glycosyl hydrolase family 3
PNEOPDPM_01344	0.0	-	-	-	G	-	-	-	alpha-galactosidase
PNEOPDPM_01345	0.0	-	-	-	K	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01346	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PNEOPDPM_01347	2.47e-297	-	-	-	S	-	-	-	Glycosyl Hydrolase Family 88
PNEOPDPM_01348	0.0	-	-	-	T	-	-	-	Response regulator receiver domain protein
PNEOPDPM_01349	6.48e-136	-	-	-	L	-	-	-	Bacterial DNA-binding protein
PNEOPDPM_01350	1.15e-259	-	-	-	K	-	-	-	Fic/DOC family
PNEOPDPM_01351	1.9e-277	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_01352	3.65e-128	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_01353	0.0	-	-	-	D	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_01354	5.77e-210	-	-	-	-	-	-	-	-
PNEOPDPM_01355	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolases family 2, TIM barrel domain
PNEOPDPM_01356	1.77e-150	-	-	-	C	-	-	-	Nitroreductase family
PNEOPDPM_01359	3.34e-210	-	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Formamidopyrimidine-DNA glycosylase H2TH domain
PNEOPDPM_01360	4.68e-111	-	-	-	S	-	-	-	HEPN domain
PNEOPDPM_01361	2.21e-181	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
PNEOPDPM_01362	0.0	-	-	-	N	-	-	-	Fimbrillin-like
PNEOPDPM_01363	2.07e-173	pgl	3.1.1.31	-	G	ko:K01057	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	6-phosphogluconolactonase
PNEOPDPM_01364	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PNEOPDPM_01365	0.0	gnd	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PNEOPDPM_01366	0.0	merA	-	-	C	ko:K21739	-	ko00000	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PNEOPDPM_01367	2.47e-310	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PNEOPDPM_01368	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PNEOPDPM_01369	0.0	-	-	-	G	-	-	-	Alpha-L-arabinofuranosidase C-terminal domain
PNEOPDPM_01370	1.17e-79	-	-	-	T	-	-	-	cheY-homologous receiver domain
PNEOPDPM_01371	3.03e-276	-	-	-	M	-	-	-	Bacterial sugar transferase
PNEOPDPM_01372	1.43e-178	-	-	-	MU	-	-	-	Outer membrane efflux protein
PNEOPDPM_01373	0.0	-	-	-	M	-	-	-	COG NOG36677 non supervised orthologous group
PNEOPDPM_01374	1.07e-149	-	-	-	M	-	-	-	COG NOG36677 non supervised orthologous group
PNEOPDPM_01375	0.0	-	-	-	M	-	-	-	O-antigen ligase like membrane protein
PNEOPDPM_01376	3.13e-293	-	-	-	M	-	-	-	Glycosyl transferase family group 2
PNEOPDPM_01377	1.75e-277	-	-	-	M	-	-	-	Psort location Cytoplasmic, score
PNEOPDPM_01378	1.2e-150	-	-	-	S	-	-	-	Hexapeptide repeat of succinyl-transferase
PNEOPDPM_01379	6.91e-234	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PNEOPDPM_01380	0.0	-	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PNEOPDPM_01381	2.47e-273	-	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_01382	4.17e-188	-	-	-	Q	-	-	-	Methionine biosynthesis protein MetW
PNEOPDPM_01383	2.13e-275	-	-	-	M	-	-	-	Glycosyl transferase family group 2
PNEOPDPM_01384	2.28e-217	-	-	-	S	ko:K07011	-	ko00000	Glycosyl transferase family 2
PNEOPDPM_01385	9.88e-283	-	-	-	M	-	-	-	Glycosyl transferase family 21
PNEOPDPM_01386	1.25e-262	-	2.7.13.3	-	T	ko:K11527	-	ko00000,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
PNEOPDPM_01387	1.32e-106	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PNEOPDPM_01388	1.12e-304	-	-	-	MU	-	-	-	Outer membrane efflux protein
PNEOPDPM_01389	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PNEOPDPM_01390	3.39e-233	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_01391	5.87e-229	nucA_1	-	-	F	ko:K01173	ko04210,map04210	ko00000,ko00001,ko03029	DNA/RNA non-specific endonuclease
PNEOPDPM_01392	0.0	-	-	-	G	-	-	-	Bacterial alpha-L-rhamnosidase C-terminal domain
PNEOPDPM_01393	0.0	-	-	-	G	-	-	-	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PNEOPDPM_01394	8.78e-196	rhaD	4.1.2.19	-	G	ko:K01629	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Class II Aldolase and Adducin N-terminal domain
PNEOPDPM_01395	7.87e-243	rhaT	-	-	EG	ko:K02856	-	ko00000,ko02000	L-rhamnose-proton symport protein (RhaT)
PNEOPDPM_01396	5.19e-313	rhaA	5.3.1.14	-	G	ko:K01813	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	L-rhamnose isomerase (RhaA)
PNEOPDPM_01397	0.0	rhaB	2.7.1.5, 2.7.1.51	-	G	ko:K00848,ko:K00879	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	FGGY family of carbohydrate kinases, N-terminal domain
PNEOPDPM_01398	4.1e-220	-	-	-	K	-	-	-	AraC-like ligand binding domain
PNEOPDPM_01399	1.21e-112	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_01400	0.0	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
PNEOPDPM_01401	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 2, sugar binding domain protein
PNEOPDPM_01402	0.0	-	4.2.2.5	PL8	N	ko:K19049	-	ko00000,ko01000	Polysaccharide lyase family 8, N terminal alpha-helical domain
PNEOPDPM_01403	1.24e-180	dpm1	2.4.1.83	GT2	S	ko:K00721	ko00510,ko01100,map00510,map01100	ko00000,ko00001,ko01000,ko01003	Dolichyl-phosphate beta-D-mannosyltransferase
PNEOPDPM_01404	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PNEOPDPM_01405	3.25e-294	-	-	-	S	-	-	-	AAA domain
PNEOPDPM_01407	0.0	-	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
PNEOPDPM_01408	0.0	-	-	-	M	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_01409	1.47e-301	mleN	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
PNEOPDPM_01412	2.61e-234	ltd	-	-	GM	-	-	-	NAD dependent epimerase dehydratase family
PNEOPDPM_01413	3.33e-286	kbl	2.3.1.29	-	H	ko:K00639	ko00260,map00260	ko00000,ko00001,ko01000,ko01007	Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA
PNEOPDPM_01414	2.53e-31	-	-	-	-	-	-	-	-
PNEOPDPM_01415	2.21e-227	-	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidinol phosphatase
PNEOPDPM_01416	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01417	6.29e-296	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PNEOPDPM_01418	0.0	lacZ	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PNEOPDPM_01419	0.0	-	-	-	C	-	-	-	NapC/NirT cytochrome c family, N-terminal region
PNEOPDPM_01420	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PNEOPDPM_01421	1.83e-232	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PNEOPDPM_01422	5.13e-164	-	-	-	K	ko:K07322	-	ko00000	Di-iron-containing protein involved in the repair of iron-sulfur clusters
PNEOPDPM_01423	2.54e-132	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PNEOPDPM_01425	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	Psort location OuterMembrane, score 10.00
PNEOPDPM_01426	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PNEOPDPM_01427	6.65e-298	-	-	-	EGP	-	-	-	Acetyl-coenzyme A transporter 1
PNEOPDPM_01428	0.0	hemN	-	-	H	-	-	-	Belongs to the anaerobic coproporphyrinogen-III oxidase family
PNEOPDPM_01429	0.0	hemG	1.3.3.15, 1.3.3.4	-	H	ko:K00231	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
PNEOPDPM_01430	5.17e-86	-	-	-	S	-	-	-	Putative prokaryotic signal transducing protein
PNEOPDPM_01431	2.84e-32	-	-	-	-	-	-	-	-
PNEOPDPM_01432	0.0	gdhA	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PNEOPDPM_01433	0.0	-	-	-	S	ko:K09955	-	ko00000	Beta-L-arabinofuranosidase, GH127
PNEOPDPM_01434	2.03e-295	rlmI	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	SAM-dependent methyltransferase
PNEOPDPM_01435	1.59e-135	rnd	-	-	L	-	-	-	3'-5' exonuclease
PNEOPDPM_01436	1.68e-126	-	-	-	S	-	-	-	Domain of unknown function (DUF5063)
PNEOPDPM_01437	1.53e-140	-	-	-	L	-	-	-	regulation of translation
PNEOPDPM_01438	1.81e-94	-	-	-	K	-	-	-	DNA-templated transcription, initiation
PNEOPDPM_01439	1.47e-136	-	-	-	K	-	-	-	Belongs to the sigma-70 factor family. ECF subfamily
PNEOPDPM_01440	2.7e-278	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_01441	0.0	-	-	-	P	-	-	-	Carboxypeptidase regulatory-like domain
PNEOPDPM_01442	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PNEOPDPM_01443	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_01444	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01445	2.93e-234	-	-	-	S	-	-	-	Domain of unknown function (DUF1735)
PNEOPDPM_01446	0.0	-	-	-	S	-	-	-	Glycosyl Hydrolase Family 88
PNEOPDPM_01447	6.3e-123	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PNEOPDPM_01448	3.29e-233	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_01449	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PNEOPDPM_01450	0.0	-	-	-	M	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01451	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PNEOPDPM_01452	0.0	-	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Beta-galactosidase trimerisation domain
PNEOPDPM_01453	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	cell division protein FtsK
PNEOPDPM_01454	3.69e-158	lolA	-	-	M	ko:K03634	-	ko00000	Outer membrane lipoprotein carrier protein LolA
PNEOPDPM_01455	3.41e-230	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PNEOPDPM_01456	0.0	yngK	-	-	S	-	-	-	Glycosyl hydrolase-like 10
PNEOPDPM_01457	4.79e-104	-	-	-	-	-	-	-	-
PNEOPDPM_01458	0.0	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_01459	1.28e-71	-	-	-	P	ko:K08364	-	ko00000,ko02000	Heavy-metal-associated domain
PNEOPDPM_01460	1.57e-119	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_01461	7.38e-292	-	-	-	S	-	-	-	Outer membrane protein beta-barrel domain
PNEOPDPM_01462	4.85e-183	-	-	-	-	-	-	-	-
PNEOPDPM_01463	1.35e-162	-	-	-	S	-	-	-	Suppressor of fused protein (SUFU)
PNEOPDPM_01464	6.18e-67	-	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin
PNEOPDPM_01465	6.82e-15	-	-	-	P	-	-	-	Outer membrane protein beta-barrel family
PNEOPDPM_01466	2.51e-187	-	-	-	K	-	-	-	YoaP-like
PNEOPDPM_01467	0.0	-	-	-	S	-	-	-	amine dehydrogenase activity
PNEOPDPM_01468	2.21e-256	-	-	-	S	-	-	-	amine dehydrogenase activity
PNEOPDPM_01470	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PNEOPDPM_01471	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PNEOPDPM_01472	4.17e-236	-	-	-	M	-	-	-	Peptidase, M23
PNEOPDPM_01473	1.35e-80	ycgE	-	-	K	-	-	-	Transcriptional regulator
PNEOPDPM_01474	8.59e-80	-	-	-	L	-	-	-	Domain of unknown function (DUF3127)
PNEOPDPM_01475	6.44e-214	yrbG	-	-	P	ko:K07301	-	ko00000,ko02000	K -dependent Na Ca exchanger
PNEOPDPM_01476	7.48e-190	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase family
PNEOPDPM_01477	0.0	-	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	ATPase domain of DNA mismatch repair MUTS family
PNEOPDPM_01478	3.9e-137	-	-	-	-	-	-	-	-
PNEOPDPM_01479	9.91e-68	-	-	-	S	-	-	-	Protein conserved in bacteria
PNEOPDPM_01480	0.0	-	-	-	M	-	-	-	TamB, inner membrane protein subunit of TAM complex
PNEOPDPM_01481	0.0	-	-	-	M	-	-	-	Outer membrane protein, OMP85 family
PNEOPDPM_01482	5.8e-275	-	-	-	H	-	-	-	TonB-dependent Receptor Plug Domain
PNEOPDPM_01483	8.32e-297	-	-	-	H	-	-	-	TonB-dependent Receptor Plug Domain
PNEOPDPM_01484	0.0	-	-	-	E	-	-	-	Domain of unknown function (DUF4374)
PNEOPDPM_01485	6.45e-203	-	-	-	S	ko:K07017	-	ko00000	Putative esterase
PNEOPDPM_01486	6.01e-289	piuB	-	-	S	-	-	-	PepSY-associated TM region
PNEOPDPM_01487	5.46e-184	-	-	-	-	-	-	-	-
PNEOPDPM_01488	3.43e-282	-	-	-	S	-	-	-	Domain of unknown function (DUF362)
PNEOPDPM_01489	2.5e-174	yfkO	-	-	C	-	-	-	nitroreductase
PNEOPDPM_01490	7.79e-78	-	-	-	-	-	-	-	-
PNEOPDPM_01491	0.0	-	-	-	P	ko:K16089	-	ko00000,ko02000	TonB-dependent receptor
PNEOPDPM_01492	1.52e-67	-	-	-	S	-	-	-	Protein of unknown function (DUF2023)
PNEOPDPM_01493	4.35e-67	-	-	-	C	ko:K03839	-	ko00000	FMN binding
PNEOPDPM_01494	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PNEOPDPM_01495	0.0	mltD	-	-	M	ko:K08307	-	ko00000,ko01000,ko01011	transglycosylase
PNEOPDPM_01496	8.52e-165	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PNEOPDPM_01497	1.19e-198	parB	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PNEOPDPM_01498	6.04e-172	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Chromosome partitioning protein ParA
PNEOPDPM_01499	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01500	0.0	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_01501	1.41e-239	-	-	-	S	-	-	-	COG NOG26135 non supervised orthologous group
PNEOPDPM_01502	0.0	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_01503	2.15e-190	surE	3.1.3.5	-	S	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
PNEOPDPM_01504	1.23e-276	lpxB	2.4.1.182	GT19	M	ko:K00748	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PNEOPDPM_01505	9.48e-186	-	-	-	S	-	-	-	NigD-like N-terminal OB domain
PNEOPDPM_01506	4.97e-132	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_01507	1.1e-121	-	-	-	-	-	-	-	-
PNEOPDPM_01508	6.54e-220	-	-	-	-	-	-	-	-
PNEOPDPM_01510	1.6e-127	rpoE	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_01511	2.28e-77	-	-	-	-	-	-	-	-
PNEOPDPM_01512	8.26e-219	-	-	-	G	-	-	-	Domain of Unknown Function (DUF1080)
PNEOPDPM_01513	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PNEOPDPM_01514	1.26e-46	-	-	-	S	-	-	-	Domain of unknown function (DUF4492)
PNEOPDPM_01515	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
PNEOPDPM_01516	4.8e-273	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome C oxidase assembly protein
PNEOPDPM_01517	3.26e-226	rnz	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PNEOPDPM_01518	4.92e-65	-	-	-	-	-	-	-	-
PNEOPDPM_01519	0.0	fadL	-	-	I	ko:K06076	-	ko00000,ko02000	Outer membrane protein transport protein (OMPP1/FadL/TodX)
PNEOPDPM_01520	5.48e-164	queC	6.3.4.20	-	F	ko:K06920	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PNEOPDPM_01521	2.82e-114	queF	1.7.1.13	-	H	ko:K09457	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PNEOPDPM_01522	3.2e-200	-	-	-	G	-	-	-	Domain of Unknown Function (DUF1080)
PNEOPDPM_01523	9.95e-159	-	-	-	-	-	-	-	-
PNEOPDPM_01524	1.34e-313	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	Outer membrane efflux protein
PNEOPDPM_01525	1.17e-269	-	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_01526	2.3e-172	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PNEOPDPM_01527	1.83e-279	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PNEOPDPM_01528	7.23e-263	cheA	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_01529	2.48e-173	yehT_1	-	-	KT	-	-	-	LytTr DNA-binding domain
PNEOPDPM_01530	0.0	dacB	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PNEOPDPM_01531	4.6e-252	-	-	-	S	-	-	-	Permease
PNEOPDPM_01533	6.58e-116	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PNEOPDPM_01534	5.21e-155	-	-	-	S	-	-	-	Tetratricopeptide repeat
PNEOPDPM_01535	1.4e-261	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PNEOPDPM_01536	2.02e-62	-	-	-	S	-	-	-	Protein of unknown function (DUF721)
PNEOPDPM_01537	5.49e-107	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PNEOPDPM_01538	0.0	ctp	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PNEOPDPM_01539	8.29e-100	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	deaminase
PNEOPDPM_01540	0.0	dcp	3.4.15.5, 3.4.24.70	-	E	ko:K01284,ko:K01414	-	ko00000,ko01000,ko01002	peptidase
PNEOPDPM_01541	0.0	-	-	-	G	-	-	-	Glycogen debranching enzyme
PNEOPDPM_01542	0.0	gmhA	2.4.1.346	GT4	M	ko:K13668	-	ko00000,ko01000,ko01003	Starch synthase catalytic domain
PNEOPDPM_01543	0.0	amyA	3.2.1.1	GH57	G	ko:K07405	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 57
PNEOPDPM_01544	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4270)
PNEOPDPM_01545	9.53e-207	glgA	2.4.1.21	GT5	G	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	synthase
PNEOPDPM_01546	1.12e-205	panC	6.3.2.1	-	H	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PNEOPDPM_01547	1.25e-74	panD	4.1.1.11	-	H	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PNEOPDPM_01548	1.34e-296	-	-	-	V	-	-	-	COG0534 Na -driven multidrug efflux pump
PNEOPDPM_01549	6.02e-305	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PNEOPDPM_01550	1.26e-211	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PNEOPDPM_01552	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01553	5.02e-296	-	-	-	G	-	-	-	Beta-galactosidase
PNEOPDPM_01554	0.0	-	-	-	H	-	-	-	Carboxypeptidase regulatory-like domain
PNEOPDPM_01555	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01556	0.0	-	-	-	H	-	-	-	cobalamin-transporting ATPase activity
PNEOPDPM_01557	0.0	-	-	-	F	-	-	-	SusD family
PNEOPDPM_01559	3.11e-84	-	-	-	-	-	-	-	-
PNEOPDPM_01560	0.0	-	-	-	G	-	-	-	Bacterial alpha-L-rhamnosidase C-terminal domain
PNEOPDPM_01561	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01562	6.28e-136	-	-	-	T	-	-	-	Cyclic nucleotide-monophosphate binding domain
PNEOPDPM_01563	2.91e-296	-	-	-	V	-	-	-	MatE
PNEOPDPM_01564	0.0	-	-	-	P	-	-	-	Outer membrane protein beta-barrel family
PNEOPDPM_01565	3.89e-207	-	-	-	K	-	-	-	Helix-turn-helix domain
PNEOPDPM_01566	5.04e-231	-	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Ketopantoate reductase PanE/ApbA
PNEOPDPM_01569	1.18e-222	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase, gnat family
PNEOPDPM_01570	0.0	rluA	5.4.99.28, 5.4.99.29	-	J	ko:K06177	-	ko00000,ko01000,ko03009,ko03016	RNA pseudouridylate synthase
PNEOPDPM_01571	3.03e-158	-	-	-	J	-	-	-	Domain of unknown function (DUF4476)
PNEOPDPM_01572	7.47e-148	-	-	-	S	-	-	-	nucleotidyltransferase activity
PNEOPDPM_01573	8.5e-207	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
PNEOPDPM_01574	2.86e-74	-	-	-	S	-	-	-	MazG-like family
PNEOPDPM_01575	0.0	-	-	-	L	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PNEOPDPM_01576	0.0	-	-	-	L	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PNEOPDPM_01578	3e-222	-	-	-	K	-	-	-	DNA-templated transcription, initiation
PNEOPDPM_01579	4.15e-191	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	SpoU rRNA Methylase family
PNEOPDPM_01580	3.7e-263	yjmD_2	-	-	E	ko:K18369	ko00640,map00640	ko00000,ko00001,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent
PNEOPDPM_01581	4e-40	-	-	-	K	-	-	-	Transcriptional regulator
PNEOPDPM_01582	1.13e-75	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	HipA N-terminal domain
PNEOPDPM_01583	8.35e-229	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	Pfam:HipA_N
PNEOPDPM_01584	3.54e-43	XK27_07105	-	-	K	ko:K07729	-	ko00000,ko03000	sequence-specific DNA binding
PNEOPDPM_01585	3.26e-299	-	-	-	S	-	-	-	COGs COG2380 conserved
PNEOPDPM_01586	0.0	-	-	-	S	ko:K06915	-	ko00000	COG0433 Predicted ATPase
PNEOPDPM_01587	0.0	-	-	-	O	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PNEOPDPM_01588	0.0	-	-	-	C	-	-	-	radical SAM domain protein
PNEOPDPM_01589	1.64e-238	-	-	-	S	-	-	-	Virulence protein RhuM family
PNEOPDPM_01590	6.73e-101	-	-	-	-	-	-	-	-
PNEOPDPM_01591	5.43e-117	-	-	-	U	-	-	-	Relaxase/Mobilisation nuclease domain
PNEOPDPM_01593	1.21e-286	-	-	-	M	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3868)
PNEOPDPM_01594	4.59e-90	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_01595	1.82e-10	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_01596	1.18e-292	-	-	-	L	-	-	-	Phage integrase SAM-like domain
PNEOPDPM_01597	9.74e-108	-	-	-	S	ko:K09793	-	ko00000	Protein of unknown function (DUF456)
PNEOPDPM_01598	6.99e-115	-	1.16.3.1	-	P	ko:K03594	ko00860,map00860	ko00000,ko00001,ko01000	Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex
PNEOPDPM_01599	6.76e-73	-	-	-	-	-	-	-	-
PNEOPDPM_01600	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF4838)
PNEOPDPM_01601	0.0	eptA	-	-	S	-	-	-	Domain of unknown function (DUF1705)
PNEOPDPM_01602	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PNEOPDPM_01603	1.54e-293	-	-	-	S	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
PNEOPDPM_01604	1.68e-310	-	-	-	T	ko:K07713	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PNEOPDPM_01605	3.85e-103	-	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	TspO/MBR family
PNEOPDPM_01606	7.61e-102	-	-	-	-	-	-	-	-
PNEOPDPM_01607	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF3440)
PNEOPDPM_01608	3.89e-117	ibrB	-	-	K	-	-	-	ParB-like nuclease domain
PNEOPDPM_01609	6.25e-211	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
PNEOPDPM_01610	1.96e-253	-	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PNEOPDPM_01611	4.92e-149	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PNEOPDPM_01612	6.37e-187	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
PNEOPDPM_01613	2.89e-223	-	-	-	S	-	-	-	Bacteriophage abortive infection AbiH
PNEOPDPM_01614	2.27e-315	-	-	-	-	-	-	-	-
PNEOPDPM_01615	9.86e-153	-	-	-	-	-	-	-	-
PNEOPDPM_01616	0.0	-	-	-	L	-	-	-	ATPase involved in DNA repair
PNEOPDPM_01617	7.82e-240	-	-	-	-	-	-	-	-
PNEOPDPM_01618	3.61e-215	-	-	-	L	-	-	-	COG NOG11942 non supervised orthologous group
PNEOPDPM_01619	1.81e-313	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_01620	4.27e-223	-	-	-	S	-	-	-	Domain of unknown function (DUF5119)
PNEOPDPM_01621	1.54e-222	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_01624	4.31e-06	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_01625	2.53e-285	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_01626	1.05e-298	-	1.1.2.6	-	U	ko:K05889	-	ko00000,ko01000	domain, Protein
PNEOPDPM_01627	4.33e-62	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_01631	4.09e-310	dcm	2.1.1.37	-	L	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	C-5 cytosine-specific DNA methylase
PNEOPDPM_01632	0.0	-	-	-	L	-	-	-	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PNEOPDPM_01633	0.0	-	-	-	L	-	-	-	Z1 domain
PNEOPDPM_01634	6.96e-239	-	-	-	S	-	-	-	Putative PD-(D/E)XK family member, (DUF4420)
PNEOPDPM_01635	0.0	-	-	-	S	-	-	-	AIPR protein
PNEOPDPM_01636	6.55e-117	vsr	-	-	L	ko:K07458	-	ko00000,ko01000,ko03400	May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PNEOPDPM_01637	2.73e-97	-	-	-	S	-	-	-	FIC family
PNEOPDPM_01638	5.29e-86	-	-	-	L	-	-	-	DNA-binding protein
PNEOPDPM_01640	2.03e-73	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	HipA-like C-terminal domain protein
PNEOPDPM_01641	9.59e-67	-	-	-	K	-	-	-	Transcriptional regulator
PNEOPDPM_01643	1.31e-93	-	-	-	L	-	-	-	DNA-binding protein
PNEOPDPM_01644	4.69e-43	-	-	-	-	-	-	-	-
PNEOPDPM_01645	3.46e-95	-	-	-	S	-	-	-	Peptidase M15
PNEOPDPM_01647	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
PNEOPDPM_01649	3.11e-141	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
PNEOPDPM_01650	2.63e-52	-	-	-	E	-	-	-	Transglutaminase/protease-like homologues
PNEOPDPM_01651	2.57e-114	-	-	-	O	-	-	-	Thioredoxin
PNEOPDPM_01652	5.18e-250	-	1.8.5.2	-	S	ko:K16936,ko:K16937	ko00920,ko01120,map00920,map01120	ko00000,ko00001,ko01000	TQO small subunit DoxA
PNEOPDPM_01653	3.72e-145	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PNEOPDPM_01654	8.55e-291	wbbL	-	-	S	ko:K07011	-	ko00000	Glycosyl transferase family group 2
PNEOPDPM_01655	2.5e-126	speG	2.3.1.57	-	J	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	Acetyltransferase (GNAT) domain
PNEOPDPM_01656	1.94e-147	-	-	-	K	ko:K07735	-	ko00000,ko03000	Uncharacterized ACR, COG1678
PNEOPDPM_01657	0.0	alaC	-	-	E	-	-	-	Aminotransferase
PNEOPDPM_01658	5.67e-231	-	-	-	-	-	-	-	-
PNEOPDPM_01659	5.43e-229	-	-	-	-	-	-	-	-
PNEOPDPM_01660	6.44e-122	-	-	-	CO	-	-	-	SCO1/SenC
PNEOPDPM_01664	1.29e-197	xapA	2.4.2.1	-	F	ko:K03783	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PNEOPDPM_01665	2.1e-307	mtaD	3.5.4.28, 3.5.4.31	-	F	ko:K12960	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine
PNEOPDPM_01666	1.55e-309	dbpA	3.6.4.13	-	L	ko:K05591	-	ko00000,ko01000,ko03009	DbpA RNA binding domain
PNEOPDPM_01667	0.0	dapE	-	-	E	-	-	-	peptidase
PNEOPDPM_01668	1.29e-278	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
PNEOPDPM_01669	9.14e-122	ogt	2.1.1.63	-	L	ko:K00567,ko:K10778	-	ko00000,ko01000,ko03000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PNEOPDPM_01670	0.0	-	-	-	G	-	-	-	BNR repeat-like domain
PNEOPDPM_01671	0.0	-	1.2.1.21, 1.2.1.22	-	C	ko:K07248	ko00620,ko00630,ko01120,map00620,map00630,map01120	ko00000,ko00001,ko01000	Aldehyde dehydrogenase family
PNEOPDPM_01674	4.71e-264	-	-	-	MU	-	-	-	Outer membrane efflux protein
PNEOPDPM_01675	0.0	czcA	-	-	P	ko:K07787	ko02020,map02020	ko00000,ko00001,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PNEOPDPM_01676	8.56e-272	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_01677	2.49e-84	-	-	-	S	-	-	-	COG NOG32090 non supervised orthologous group
PNEOPDPM_01678	5.62e-226	-	-	-	-	-	-	-	-
PNEOPDPM_01679	8.69e-182	thi4	-	-	H	ko:K03146	ko00730,ko01100,map00730,map01100	ko00000,ko00001	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
PNEOPDPM_01680	1.64e-151	-	-	-	F	-	-	-	Cytidylate kinase-like family
PNEOPDPM_01681	3.02e-311	-	-	-	V	-	-	-	Multidrug transporter MatE
PNEOPDPM_01682	4e-110	msrC	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain
PNEOPDPM_01683	0.0	-	-	-	G	-	-	-	Beta galactosidase small chain
PNEOPDPM_01684	0.0	sglT	-	-	S	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PNEOPDPM_01685	1.98e-191	-	-	-	IQ	-	-	-	KR domain
PNEOPDPM_01686	6.07e-299	-	4.2.1.6	-	M	ko:K01684	ko00052,ko01100,ko01120,map00052,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
PNEOPDPM_01687	4.86e-166	-	4.1.3.17	-	H	ko:K10218	ko00362,ko00660,ko01120,map00362,map00660,map01120	ko00000,ko00001,ko01000	Aldolase/RraA
PNEOPDPM_01689	3.74e-208	-	-	-	K	-	-	-	AraC-like ligand binding domain
PNEOPDPM_01690	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01691	0.0	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain
PNEOPDPM_01692	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01693	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01694	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_01695	2.44e-242	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_01696	1.58e-125	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_01700	0.0	-	-	-	G	-	-	-	Beta galactosidase small chain
PNEOPDPM_01701	3.74e-10	-	-	-	-	-	-	-	-
PNEOPDPM_01702	0.0	-	-	-	P	-	-	-	Pfam:SusD
PNEOPDPM_01703	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_01704	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Fibronectin type III-like domain
PNEOPDPM_01705	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PNEOPDPM_01707	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	COG NOG04001 non supervised orthologous group
PNEOPDPM_01708	3.44e-50	-	-	-	G	-	-	-	Glycosyl hydrolases family 2, TIM barrel domain
PNEOPDPM_01710	2.13e-88	-	-	-	S	-	-	-	Lipocalin-like domain
PNEOPDPM_01711	0.0	-	-	-	S	-	-	-	Capsule assembly protein Wzi
PNEOPDPM_01712	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNEOPDPM_01713	6.65e-67	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PNEOPDPM_01714	7.27e-242	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PNEOPDPM_01716	3.25e-48	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PNEOPDPM_01717	7.57e-103	-	-	-	L	-	-	-	regulation of translation
PNEOPDPM_01718	3.32e-107	-	-	-	NU	ko:K02395	-	ko00000,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PNEOPDPM_01720	1.98e-96	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_01721	5.03e-231	wcgX	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferase family 4
PNEOPDPM_01722	1.47e-241	-	-	-	GM	-	-	-	3-beta hydroxysteroid dehydrogenase/isomerase family
PNEOPDPM_01723	9.49e-302	-	-	GT4	M	ko:K03208	-	ko00000	Glycosyltransferase, group 1 family
PNEOPDPM_01724	1.78e-285	-	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PNEOPDPM_01725	5.25e-301	-	1.1.1.367	-	GM	ko:K19068	-	ko00000,ko01000	NAD dependent epimerase/dehydratase family
PNEOPDPM_01726	1.63e-258	-	5.1.3.2	-	M	ko:K17716	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Polysaccharide biosynthesis protein C-terminal
PNEOPDPM_01727	2.64e-307	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_01728	1.61e-298	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_01729	2.93e-316	wbpO	1.1.1.136	-	M	ko:K02474,ko:K13015	ko00520,map00520	ko00000,ko00001,ko01000,ko01005	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PNEOPDPM_01732	6.34e-228	-	-	-	S	-	-	-	Glycosyltransferase like family 2
PNEOPDPM_01733	1.41e-241	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PNEOPDPM_01734	0.0	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
PNEOPDPM_01735	1.1e-232	-	4.1.1.35	-	M	ko:K08678	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko00002,ko01000	GDP-mannose 4,6 dehydratase
PNEOPDPM_01736	0.0	-	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PNEOPDPM_01737	0.0	wbpM	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
PNEOPDPM_01738	3.46e-245	tagO	-	-	M	-	-	-	UDP-N-acetylmuramyl pentapeptide phosphotransferase
PNEOPDPM_01739	4.29e-296	-	1.1.1.336	-	M	ko:K02472	ko00520,ko05111,map00520,map05111	ko00000,ko00001,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PNEOPDPM_01740	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_01741	2.12e-252	-	-	-	S	-	-	-	EpsG family
PNEOPDPM_01742	8.51e-289	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PNEOPDPM_01743	1.59e-288	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_01744	4.48e-90	-	2.3.1.30	-	E	ko:K00640,ko:K03819	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Bacterial transferase hexapeptide (six repeats)
PNEOPDPM_01745	0.0	-	-	-	S	-	-	-	Heparinase II/III N-terminus
PNEOPDPM_01746	4.12e-295	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PNEOPDPM_01747	8.1e-282	-	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	UDP-N-acetylglucosamine 2-epimerase
PNEOPDPM_01748	0.0	kpsD	-	-	M	-	-	-	Polysaccharide biosynthesis/export protein
PNEOPDPM_01749	4.06e-245	-	-	-	M	-	-	-	Chain length determinant protein
PNEOPDPM_01750	0.0	fkp	-	-	S	-	-	-	L-fucokinase
PNEOPDPM_01751	2.82e-132	-	-	-	L	-	-	-	Resolvase, N terminal domain
PNEOPDPM_01753	4.52e-106	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PNEOPDPM_01754	2.24e-141	-	-	-	S	-	-	-	Phage tail protein
PNEOPDPM_01755	4.14e-154	yggS	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PNEOPDPM_01756	2.42e-59	-	1.3.98.1	-	F	ko:K00226	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	dihydroorotate dehydrogenase activity
PNEOPDPM_01757	1.11e-155	-	1.3.98.1	-	F	ko:K00226	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dihydroorotate to orotate
PNEOPDPM_01758	1.24e-68	-	-	-	S	-	-	-	Cupin domain
PNEOPDPM_01759	4.25e-82	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PNEOPDPM_01760	0.0	cdr	-	-	P	-	-	-	Belongs to the sulfur carrier protein TusA family
PNEOPDPM_01761	0.0	-	-	-	M	-	-	-	Domain of unknown function (DUF3472)
PNEOPDPM_01762	1.94e-306	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	seryl-tRNA synthetase
PNEOPDPM_01763	1.63e-126	mepS	3.4.17.13	-	M	ko:K13694	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
PNEOPDPM_01764	3.2e-95	-	-	-	L	-	-	-	Domain of unknown function (DUF1848)
PNEOPDPM_01765	2.06e-107	-	-	-	S	-	-	-	Domain of unknown function (DUF1905)
PNEOPDPM_01766	2.8e-230	-	-	-	V	-	-	-	Efflux ABC transporter, permease protein
PNEOPDPM_01767	0.0	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_01768	0.0	-	-	-	H	-	-	-	Susd and RagB outer membrane lipoprotein
PNEOPDPM_01769	2.59e-298	-	-	-	S	ko:K07133	-	ko00000	AAA domain
PNEOPDPM_01770	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
PNEOPDPM_01771	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PNEOPDPM_01772	1.81e-274	-	-	-	L	-	-	-	Arm DNA-binding domain
PNEOPDPM_01773	2.15e-298	rarA	-	-	L	ko:K07478	-	ko00000	ATPase (AAA
PNEOPDPM_01774	3.97e-255	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PNEOPDPM_01775	1.59e-214	serA	1.1.1.399, 1.1.1.95	-	CH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNEOPDPM_01776	2.02e-308	-	-	-	S	-	-	-	Protein of unknown function (DUF1015)
PNEOPDPM_01777	0.0	ydhQ	2.7.11.1	-	N	ko:K12132,ko:K14645	ko02024,map02024	ko00000,ko00001,ko01000,ko01001,ko01002,ko03110	domain, Protein
PNEOPDPM_01778	8.96e-172	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
PNEOPDPM_01779	0.0	-	-	-	S	-	-	-	Predicted AAA-ATPase
PNEOPDPM_01780	3.07e-119	-	-	-	I	-	-	-	Domain of unknown function (DUF4833)
PNEOPDPM_01781	1.19e-111	-	-	-	G	-	-	-	Cupin 2, conserved barrel domain protein
PNEOPDPM_01782	0.0	-	-	-	T	-	-	-	Periplasmic binding proteins and sugar binding domain of LacI family
PNEOPDPM_01783	1.59e-211	-	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	pfkB family
PNEOPDPM_01784	9.6e-106	-	-	-	D	-	-	-	cell division
PNEOPDPM_01785	0.0	pop	-	-	EU	-	-	-	peptidase
PNEOPDPM_01786	0.0	norM	-	-	V	ko:K03327	-	ko00000,ko02000	Mate efflux family protein
PNEOPDPM_01787	1.49e-171	ppiA	5.2.1.8	-	O	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PNEOPDPM_01788	2.51e-160	ppiA	5.2.1.8	-	M	ko:K01802,ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PNEOPDPM_01789	0.0	-	-	-	S	-	-	-	Porin subfamily
PNEOPDPM_01790	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
PNEOPDPM_01791	0.0	-	-	-	S	-	-	-	COG NOG26858 non supervised orthologous group
PNEOPDPM_01792	4.91e-241	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_01793	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_01794	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01795	3.13e-222	-	-	-	S	-	-	-	Metalloenzyme superfamily
PNEOPDPM_01796	0.0	-	-	-	P	-	-	-	Arylsulfatase
PNEOPDPM_01797	1.71e-132	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_01798	5.22e-227	-	-	-	JM	-	-	-	COG NOG09722 non supervised orthologous group
PNEOPDPM_01799	0.0	abf2	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
PNEOPDPM_01800	0.0	-	-	-	O	-	-	-	Highly conserved protein containing a thioredoxin domain
PNEOPDPM_01801	1.94e-100	-	-	-	L	-	-	-	regulation of translation
PNEOPDPM_01802	2.27e-289	-	-	-	S	-	-	-	6-bladed beta-propeller
PNEOPDPM_01803	3.81e-50	-	-	-	M	-	-	-	O-Antigen ligase
PNEOPDPM_01804	0.0	-	-	-	E	-	-	-	non supervised orthologous group
PNEOPDPM_01805	0.0	-	-	-	E	-	-	-	non supervised orthologous group
PNEOPDPM_01806	1.19e-179	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PNEOPDPM_01807	1.5e-169	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidine biosynthesis protein
PNEOPDPM_01808	2.31e-179	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PNEOPDPM_01809	2.86e-140	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidine biosynthesis bifunctional protein hisIE
PNEOPDPM_01810	1.57e-164	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	ABC transporter, ATP-binding protein
PNEOPDPM_01811	1.04e-315	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PNEOPDPM_01812	1.29e-282	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PNEOPDPM_01814	2.1e-128	-	-	-	S	-	-	-	Protein of unknown function (DUF1282)
PNEOPDPM_01815	8.42e-102	smpB	-	-	O	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PNEOPDPM_01816	0.0	metH	2.1.1.13	-	E	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	B12 binding domain
PNEOPDPM_01817	3.4e-102	-	-	-	L	-	-	-	Transposase IS200 like
PNEOPDPM_01818	1.06e-179	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
PNEOPDPM_01819	0.0	-	-	-	S	-	-	-	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PNEOPDPM_01820	7.72e-258	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PNEOPDPM_01821	3.86e-283	-	-	-	-	-	-	-	-
PNEOPDPM_01823	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
PNEOPDPM_01824	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PNEOPDPM_01825	1.07e-93	vapC	-	-	S	ko:K18828	-	ko00000,ko01000,ko02048,ko03016	PIN domain
PNEOPDPM_01826	8.12e-53	-	-	-	-	-	-	-	-
PNEOPDPM_01827	1.39e-278	-	-	-	S	-	-	-	Protein of unknown function (DUF3810)
PNEOPDPM_01828	0.0	-	-	-	CO	-	-	-	Thioredoxin-like
PNEOPDPM_01829	1.36e-137	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_01830	5.3e-240	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_01831	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_01832	0.0	-	-	-	F	-	-	-	SusD family
PNEOPDPM_01833	0.0	xynD_2	3.2.1.55	CBM6,GH43	G	ko:K15921	ko00520,map00520	ko00000,ko00001,ko01000	Carbohydrate binding module (family 6)
PNEOPDPM_01834	3.9e-144	-	-	-	L	-	-	-	DNA-binding protein
PNEOPDPM_01835	3.28e-62	-	-	-	-	-	-	-	-
PNEOPDPM_01837	6.73e-211	-	-	-	S	-	-	-	HEPN domain
PNEOPDPM_01838	0.000462	-	-	-	-	-	-	-	-
PNEOPDPM_01839	4.95e-63	-	-	-	S	ko:K07075	-	ko00000	Nucleotidyltransferase domain
PNEOPDPM_01840	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PNEOPDPM_01841	4.17e-80	yocK	-	-	T	-	-	-	Molecular chaperone DnaK
PNEOPDPM_01842	2.16e-149	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PNEOPDPM_01843	1.19e-190	-	-	-	S	-	-	-	Domain of unknown function (DUF4296)
PNEOPDPM_01845	4.85e-183	aviRb	-	-	J	ko:K03437	-	ko00000,ko03016	RNA methyltransferase
PNEOPDPM_01846	2.87e-149	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_01847	0.0	-	-	-	M	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3868)
PNEOPDPM_01848	0.0	-	-	-	S	-	-	-	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PNEOPDPM_01849	8.93e-249	-	-	-	S	-	-	-	COG NOG32009 non supervised orthologous group
PNEOPDPM_01851	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01852	0.0	-	-	-	M	-	-	-	Outer membrane protein, OMP85 family
PNEOPDPM_01853	1.12e-220	-	-	-	C	-	-	-	Aldo/keto reductase family
PNEOPDPM_01854	0.0	-	-	-	S	-	-	-	ATPases associated with a variety of cellular activities
PNEOPDPM_01855	4.22e-70	-	-	-	S	-	-	-	Nucleotidyltransferase domain
PNEOPDPM_01856	1e-250	gldB	-	-	O	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_01857	1.14e-313	-	-	-	V	-	-	-	COG0534 Na -driven multidrug efflux pump
PNEOPDPM_01858	0.0	-	-	-	H	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_01859	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01860	1.5e-298	-	-	-	S	-	-	-	Domain of unknown function (DUF5126)
PNEOPDPM_01861	3.32e-285	-	-	-	G	-	-	-	Domain of unknown function
PNEOPDPM_01862	1.14e-275	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PNEOPDPM_01863	5.41e-253	-	-	-	S	-	-	-	Domain of unknown function (DUF4249)
PNEOPDPM_01864	0.0	-	-	-	P	-	-	-	TonB-dependent receptor plug domain
PNEOPDPM_01865	4.93e-135	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_01866	7.19e-235	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_01867	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_01868	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01869	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01870	0.0	-	-	-	T	-	-	-	alpha-L-rhamnosidase
PNEOPDPM_01871	1.04e-214	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase superfamily domain
PNEOPDPM_01872	8.41e-235	metF	1.5.1.20	-	C	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
PNEOPDPM_01873	1.89e-254	ilvE	2.6.1.42	-	EH	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
PNEOPDPM_01874	3.93e-292	-	-	-	S	ko:K07133	-	ko00000	ATPase (AAA
PNEOPDPM_01875	0.0	nifJ	1.2.7.1	-	C	ko:K03737	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
PNEOPDPM_01876	1.74e-144	-	-	-	S	-	-	-	SEC-C Motif Domain Protein
PNEOPDPM_01877	8.69e-258	-	-	-	C	-	-	-	Aldo/keto reductase family
PNEOPDPM_01878	1.98e-188	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PNEOPDPM_01879	1.9e-127	cah	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PNEOPDPM_01881	2.2e-254	-	-	-	S	-	-	-	Peptidase family M28
PNEOPDPM_01882	3.02e-124	-	-	-	O	-	-	-	Peptidyl-prolyl cis-trans isomerase
PNEOPDPM_01883	0.0	-	-	-	S	-	-	-	Starch-binding associating with outer membrane
PNEOPDPM_01884	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_01885	1.24e-279	-	-	-	S	-	-	-	VirE N-terminal domain protein
PNEOPDPM_01886	9.12e-154	-	-	-	L	-	-	-	DNA-binding protein
PNEOPDPM_01887	1.33e-135	-	-	-	-	-	-	-	-
PNEOPDPM_01888	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
PNEOPDPM_01889	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	TonB dependent receptor
PNEOPDPM_01891	6.62e-312	mepA_7	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_01892	0.0	poxB	1.2.5.1, 2.2.1.6	-	EH	ko:K00156,ko:K01652	ko00290,ko00620,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, central domain
PNEOPDPM_01893	4.37e-202	-	3.1.2.12	CE1	S	ko:K01070	ko00680,ko01120,ko01200,map00680,map01120,map01200	ko00000,ko00001,ko01000	Putative esterase
PNEOPDPM_01894	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
PNEOPDPM_01895	4.04e-103	glnA	6.3.1.2	-	S	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PNEOPDPM_01896	2.31e-165	-	2.1.1.130, 2.1.1.151	-	H	ko:K03394	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Precorrin-2 C20-methyltransferase
PNEOPDPM_01897	2.63e-287	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PNEOPDPM_01898	3e-229	-	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PNEOPDPM_01899	1.52e-238	fhuC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PNEOPDPM_01900	1.56e-155	-	-	-	-	-	-	-	-
PNEOPDPM_01901	0.0	cbiD	2.1.1.195	-	H	ko:K02188	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
PNEOPDPM_01902	0.0	cobM	2.1.1.133, 2.1.1.271	-	H	ko:K05936	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Cobalamin biosynthesis protein CbiG
PNEOPDPM_01903	2.61e-302	cbiE	2.1.1.132	-	H	ko:K00595	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit
PNEOPDPM_01904	0.0	cobJ	5.4.99.60, 5.4.99.61	-	H	ko:K06042	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Precorrin-3B C(17)-methyltransferase
PNEOPDPM_01906	9.8e-232	-	-	-	K	ko:K20968	ko02025,map02025	ko00000,ko00001,ko03000	Transcriptional regulator
PNEOPDPM_01907	4.65e-100	cbiK	4.99.1.3	-	H	ko:K02190	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	CbiX
PNEOPDPM_01908	0.0	aspT	-	-	S	ko:K07085	-	ko00000	Predicted Permease Membrane Region
PNEOPDPM_01909	0.0	aspD	4.1.1.12	-	E	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230	ko00000,ko00001,ko01000	Aminotransferase class I and II
PNEOPDPM_01910	0.0	acnA	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	aconitate hydratase
PNEOPDPM_01911	1.47e-303	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	Isocitrate/isopropylmalate dehydrogenase
PNEOPDPM_01912	0.0	prpC	2.3.3.1, 2.3.3.5	-	C	ko:K01647,ko:K01659	ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Citrate synthase, C-terminal domain
PNEOPDPM_01913	2.81e-298	-	-	-	O	ko:K04046	-	ko00000,ko03110	Hsp70 protein
PNEOPDPM_01914	0.0	-	2.7.13.3	-	T	ko:K02484,ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PNEOPDPM_01915	9.72e-156	srrA	-	-	T	ko:K07657,ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PNEOPDPM_01916	7.81e-56	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_01917	0.0	eam	5.4.3.2	-	E	ko:K01843	ko00310,map00310	ko00000,ko00001,ko01000	KamA family
PNEOPDPM_01918	6.84e-121	-	-	-	S	-	-	-	Uncharacterized protein containing a ferredoxin domain (DUF2148)
PNEOPDPM_01919	4.3e-229	-	-	-	-	-	-	-	-
PNEOPDPM_01920	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PNEOPDPM_01921	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01922	2.31e-165	-	-	-	-	-	-	-	-
PNEOPDPM_01923	0.0	-	-	-	S	ko:K07137	-	ko00000	FAD-binding protein
PNEOPDPM_01924	7.91e-104	-	-	-	E	-	-	-	Glyoxalase-like domain
PNEOPDPM_01926	3.05e-193	-	5.2.1.8	-	M	ko:K03768	-	ko00000,ko01000,ko03110	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
PNEOPDPM_01927	0.0	-	-	-	P	ko:K07085	-	ko00000	TrkA C-terminal domain protein
PNEOPDPM_01928	0.0	-	-	-	P	ko:K03281	-	ko00000	Voltage gated chloride channel
PNEOPDPM_01929	1.13e-224	-	-	-	L	-	-	-	COG NOG11942 non supervised orthologous group
PNEOPDPM_01930	5.53e-265	-	-	-	M	-	-	-	UDP-N-acetylmuramyl pentapeptide phosphotransferase
PNEOPDPM_01931	3.7e-260	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PNEOPDPM_01932	3.04e-259	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_01933	5.23e-277	-	-	-	S	-	-	-	O-Antigen ligase
PNEOPDPM_01934	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ATPases associated with a variety of cellular activities
PNEOPDPM_01936	3.09e-106	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PNEOPDPM_01937	3.45e-100	-	-	-	L	-	-	-	regulation of translation
PNEOPDPM_01938	0.0	-	-	-	S	-	-	-	COG NOG25960 non supervised orthologous group
PNEOPDPM_01939	1.09e-159	-	-	-	K	ko:K21556	-	ko00000,ko03000	Crp Fnr family
PNEOPDPM_01940	4.85e-189	kdsA	2.5.1.55	-	M	ko:K01627	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the KdsA family
PNEOPDPM_01941	5.59e-220	miaA2	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PNEOPDPM_01942	2.53e-240	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PNEOPDPM_01943	2.22e-85	-	-	-	-	-	-	-	-
PNEOPDPM_01944	6.15e-75	-	-	-	-	-	-	-	-
PNEOPDPM_01945	2.07e-33	-	-	-	S	-	-	-	YtxH-like protein
PNEOPDPM_01946	5.34e-210	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
PNEOPDPM_01947	5.35e-118	-	-	-	-	-	-	-	-
PNEOPDPM_01948	1.07e-301	-	-	-	S	-	-	-	AAA ATPase domain
PNEOPDPM_01949	7.88e-137	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
PNEOPDPM_01950	2.62e-116	-	-	-	PT	-	-	-	FecR protein
PNEOPDPM_01951	3.2e-100	-	-	-	PT	-	-	-	iron ion homeostasis
PNEOPDPM_01952	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_01953	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_01954	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PNEOPDPM_01955	0.0	-	-	-	C	-	-	-	Domain of Unknown Function (DUF1080)
PNEOPDPM_01956	0.0	-	-	-	T	-	-	-	PAS domain
PNEOPDPM_01957	7.76e-152	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	uracil phosphoribosyltransferase
PNEOPDPM_01958	3.01e-59	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_01959	2.8e-230	-	-	-	-	-	-	-	-
PNEOPDPM_01960	4.08e-248	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
PNEOPDPM_01961	4.7e-190	lipB	3.1.4.55	-	S	ko:K06167	ko00440,map00440	ko00000,ko00001,ko01000	Metallo-beta-lactamase superfamily
PNEOPDPM_01963	2.16e-156	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PNEOPDPM_01964	1.19e-80	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PNEOPDPM_01965	5.81e-249	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PNEOPDPM_01966	1.54e-214	-	-	-	M	-	-	-	Protein of unknown function (DUF3078)
PNEOPDPM_01967	2.57e-128	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_01968	4.01e-184	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PNEOPDPM_01969	1.52e-241	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_01970	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
PNEOPDPM_01971	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
PNEOPDPM_01972	5.74e-142	-	-	-	S	-	-	-	Virulence protein RhuM family
PNEOPDPM_01973	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_01974	3.86e-233	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PNEOPDPM_01975	0.0	-	-	-	M	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3868)
PNEOPDPM_01976	3.85e-135	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_01978	4.19e-302	-	-	-	L	-	-	-	Phage integrase SAM-like domain
PNEOPDPM_01979	6.02e-90	-	-	-	K	ko:K07722	-	ko00000,ko03000	transcriptional regulator
PNEOPDPM_01980	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	TonB dependent receptor
PNEOPDPM_01982	6.16e-262	-	-	-	S	-	-	-	TolB-like 6-blade propeller-like
PNEOPDPM_01984	6.87e-256	-	-	-	K	-	-	-	Transcriptional regulator
PNEOPDPM_01985	2.86e-196	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PNEOPDPM_01986	2.4e-130	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_01987	4.17e-119	-	-	-	-	-	-	-	-
PNEOPDPM_01988	2.73e-50	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PNEOPDPM_01989	6.23e-111	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PNEOPDPM_01991	5.29e-206	fabD	2.3.1.39	-	I	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	malonyl CoA-acyl carrier protein transacylase
PNEOPDPM_01992	2.33e-35	tatA	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PNEOPDPM_01993	1.03e-208	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PNEOPDPM_01994	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PNEOPDPM_01996	4.43e-220	xynZ	-	-	S	-	-	-	Putative esterase
PNEOPDPM_01998	0.0	-	-	-	P	ko:K03455	-	ko00000	COG0475 Kef-type K transport systems, membrane components
PNEOPDPM_02000	9.7e-300	-	-	-	S	-	-	-	Alginate lyase
PNEOPDPM_02001	2.11e-314	-	-	-	S	-	-	-	Glycosyl Hydrolase Family 88
PNEOPDPM_02002	0.0	lacZ_2	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Domain of unknown function (DUF4982)
PNEOPDPM_02003	0.0	-	-	-	T	-	-	-	helix_turn_helix, arabinose operon control protein
PNEOPDPM_02004	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_02005	0.0	-	-	-	M	-	-	-	SusD family
PNEOPDPM_02006	0.0	-	-	-	S	-	-	-	Sulfatase-modifying factor enzyme 1
PNEOPDPM_02007	0.0	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 28 family
PNEOPDPM_02008	5.68e-163	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PNEOPDPM_02009	0.0	nrfA	1.7.2.2	-	C	ko:K03385	ko00910,ko01120,ko05132,map00910,map01120,map05132	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
PNEOPDPM_02010	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PNEOPDPM_02011	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PNEOPDPM_02012	4.81e-168	-	-	-	K	-	-	-	transcriptional regulatory protein
PNEOPDPM_02013	1.39e-173	-	-	-	-	-	-	-	-
PNEOPDPM_02014	2.14e-260	-	-	-	S	-	-	-	6-bladed beta-propeller
PNEOPDPM_02015	2.32e-185	yaaA	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
PNEOPDPM_02016	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4886)
PNEOPDPM_02017	4.71e-124	-	-	-	I	-	-	-	PLD-like domain
PNEOPDPM_02018	9.44e-185	-	-	-	O	-	-	-	ADP-ribosylglycohydrolase
PNEOPDPM_02019	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PNEOPDPM_02020	2.1e-104	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PNEOPDPM_02021	1.24e-47	-	-	-	S	-	-	-	Serine-rich protein. Source PGD
PNEOPDPM_02023	1.73e-217	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PNEOPDPM_02024	1.52e-112	-	-	-	E	-	-	-	Acetyltransferase (GNAT) domain
PNEOPDPM_02025	0.0	-	-	-	T	-	-	-	Histidine kinase-like ATPases
PNEOPDPM_02026	1.79e-208	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PNEOPDPM_02027	0.0	gltB	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	GXGXG motif
PNEOPDPM_02028	0.0	gltD	1.4.1.13, 1.4.1.14	-	C	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PNEOPDPM_02029	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Glutamine amidotransferase domain
PNEOPDPM_02030	1.21e-79	-	-	-	S	-	-	-	Cupin domain
PNEOPDPM_02031	0.0	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain
PNEOPDPM_02032	1.94e-136	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PNEOPDPM_02033	3.07e-240	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_02034	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_02035	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_02036	8.43e-196	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PNEOPDPM_02037	3.33e-308	dapL	2.6.1.83	-	E	ko:K10206	ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate
PNEOPDPM_02039	2.91e-256	asnA	6.3.1.1	-	E	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
PNEOPDPM_02040	0.0	glnA	6.3.1.2	-	S	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Belongs to the glutamine synthetase family
PNEOPDPM_02042	0.0	nadE	6.3.5.1	-	H	ko:K01950	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PNEOPDPM_02043	3.33e-47	-	-	-	L	-	-	-	Nucleotidyltransferase domain
PNEOPDPM_02044	0.0	nagA	-	-	S	-	-	-	hydrolase activity, acting on glycosyl bonds
PNEOPDPM_02045	0.0	-	-	-	P	-	-	-	Domain of unknown function
PNEOPDPM_02046	3.86e-299	rhlE	3.6.4.13	-	L	ko:K11927	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Belongs to the DEAD box helicase family
PNEOPDPM_02047	0.0	recQ3	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	RQC
PNEOPDPM_02048	1.02e-42	-	-	-	-	-	-	-	-
PNEOPDPM_02049	1.94e-141	-	4.1.3.38	-	EH	ko:K02619	ko00790,map00790	ko00000,ko00001,ko01000	Amino-transferase class IV
PNEOPDPM_02050	1.82e-229	pabB	2.6.1.85	-	EH	ko:K01665	ko00790,map00790	ko00000,ko00001,ko01000	component I
PNEOPDPM_02051	1.33e-229	pabB	3.5.1.53	-	S	ko:K12251	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Hydrolase, carbon-nitrogen family
PNEOPDPM_02052	2.49e-256	aguA	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Belongs to the agmatine deiminase family
PNEOPDPM_02053	2.03e-162	-	-	-	Q	-	-	-	membrane
PNEOPDPM_02054	2.12e-59	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PNEOPDPM_02055	0.0	creD	-	-	V	ko:K06143	-	ko00000	Inner membrane protein CreD
PNEOPDPM_02056	0.0	-	-	-	L	-	-	-	Helicase associated domain
PNEOPDPM_02057	0.0	-	-	-	O	ko:K21571	-	ko00000	Fibronectin type 3 domain
PNEOPDPM_02058	5.72e-151	-	-	-	S	-	-	-	PEGA domain
PNEOPDPM_02059	0.0	-	-	-	DM	-	-	-	Chain length determinant protein
PNEOPDPM_02060	7.71e-183	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	Polysaccharide biosynthesis/export protein
PNEOPDPM_02063	5.84e-226	-	-	-	G	-	-	-	pfkB family carbohydrate kinase
PNEOPDPM_02064	0.0	prc	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PNEOPDPM_02065	5.03e-279	-	-	-	S	ko:K07098	-	ko00000	Ser Thr phosphatase family protein
PNEOPDPM_02066	1.12e-265	-	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
PNEOPDPM_02067	2.82e-146	-	-	-	C	-	-	-	Nitroreductase family
PNEOPDPM_02068	0.0	-	-	-	P	-	-	-	Outer membrane protein beta-barrel family
PNEOPDPM_02069	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PNEOPDPM_02070	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_02071	0.0	-	-	-	M	-	-	-	Pfam:SusD
PNEOPDPM_02072	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_02073	0.0	-	-	-	GM	-	-	-	SusD family
PNEOPDPM_02075	1.75e-18	-	-	-	-	-	-	-	-
PNEOPDPM_02076	4.67e-08	-	-	-	-	-	-	-	-
PNEOPDPM_02077	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PNEOPDPM_02078	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_02079	0.0	-	-	-	S	-	-	-	Heparinase II/III-like protein
PNEOPDPM_02080	2.59e-297	-	-	-	O	-	-	-	Glycosyl Hydrolase Family 88
PNEOPDPM_02081	1.26e-208	-	-	-	G	-	-	-	Glycosyl hydrolases family 16
PNEOPDPM_02082	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PNEOPDPM_02083	3.22e-108	-	-	-	-	-	-	-	-
PNEOPDPM_02084	9.02e-37	-	-	-	-	-	-	-	-
PNEOPDPM_02085	4.74e-133	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, Bacteroides expansion family 1
PNEOPDPM_02086	3.75e-242	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_02087	0.0	-	-	-	H	-	-	-	Carboxypeptidase regulatory-like domain
PNEOPDPM_02088	0.0	-	-	-	H	-	-	-	Susd and RagB outer membrane lipoprotein
PNEOPDPM_02089	2.02e-31	-	-	-	-	-	-	-	-
PNEOPDPM_02090	8.64e-71	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02091	1.73e-309	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02092	5.39e-111	-	-	-	-	-	-	-	-
PNEOPDPM_02093	4.27e-252	-	-	-	S	-	-	-	Toprim-like
PNEOPDPM_02094	1.98e-91	-	-	-	-	-	-	-	-
PNEOPDPM_02095	0.0	-	-	-	U	-	-	-	TraM recognition site of TraD and TraG
PNEOPDPM_02096	1.71e-78	-	-	-	L	-	-	-	Single-strand binding protein family
PNEOPDPM_02097	4.98e-293	-	-	-	L	-	-	-	DNA primase TraC
PNEOPDPM_02098	3.15e-34	-	-	-	-	-	-	-	-
PNEOPDPM_02099	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF3945)
PNEOPDPM_02100	4.6e-273	-	-	-	U	-	-	-	Domain of unknown function (DUF4138)
PNEOPDPM_02101	8.99e-293	-	-	-	S	-	-	-	Conjugative transposon, TraM
PNEOPDPM_02102	4.8e-158	-	-	-	-	-	-	-	-
PNEOPDPM_02103	1.4e-237	-	-	-	-	-	-	-	-
PNEOPDPM_02104	2.14e-126	-	-	-	-	-	-	-	-
PNEOPDPM_02105	8.68e-44	-	-	-	-	-	-	-	-
PNEOPDPM_02106	0.0	-	-	-	U	-	-	-	type IV secretory pathway VirB4
PNEOPDPM_02107	1.81e-61	-	-	-	-	-	-	-	-
PNEOPDPM_02108	6.73e-69	-	-	-	-	-	-	-	-
PNEOPDPM_02109	3.74e-75	-	-	-	-	-	-	-	-
PNEOPDPM_02110	5.39e-39	-	-	-	-	-	-	-	-
PNEOPDPM_02111	3.24e-143	-	-	-	S	-	-	-	Conjugative transposon protein TraO
PNEOPDPM_02112	7.9e-142	-	-	-	T	-	-	-	Cyclic nucleotide-binding domain
PNEOPDPM_02113	2.2e-274	-	-	-	-	-	-	-	-
PNEOPDPM_02114	8.48e-78	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02115	1.34e-164	-	-	-	D	-	-	-	ATPase MipZ
PNEOPDPM_02116	2.27e-81	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PNEOPDPM_02117	0.0	-	-	-	U	-	-	-	Relaxase/Mobilisation nuclease domain
PNEOPDPM_02118	4.05e-243	-	-	-	-	-	-	-	-
PNEOPDPM_02119	3.53e-29	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02120	9.07e-150	-	-	-	-	-	-	-	-
PNEOPDPM_02121	0.0	-	2.7.7.13	-	M	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
PNEOPDPM_02122	6.88e-279	-	-	GT4	M	ko:K13004	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 1 family protein
PNEOPDPM_02123	4.22e-130	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	O-acyltransferase activity
PNEOPDPM_02124	9.75e-228	rfaG	-	-	M	-	-	-	Glycosyltransferase like family 2
PNEOPDPM_02125	4.38e-267	-	-	-	S	-	-	-	EpsG family
PNEOPDPM_02126	3.37e-273	-	-	-	M	-	-	-	Glycosyltransferase Family 4
PNEOPDPM_02127	3.96e-225	-	-	-	V	-	-	-	Glycosyl transferase, family 2
PNEOPDPM_02128	2.98e-291	-	-	-	M	-	-	-	glycosyltransferase
PNEOPDPM_02129	0.0	-	-	-	M	-	-	-	glycosyl transferase
PNEOPDPM_02130	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_02132	4.4e-101	gumF	-	-	G	ko:K13663,ko:K13664,ko:K21005	ko02025,map02025	ko00000,ko00001,ko01000	nodulation
PNEOPDPM_02133	6.57e-313	wbpO	1.1.1.136	-	M	ko:K02474,ko:K13015	ko00520,map00520	ko00000,ko00001,ko01000,ko01005	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PNEOPDPM_02134	1.65e-241	wbpP	5.1.3.2, 5.1.3.7	-	M	ko:K01784,ko:K02473	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	NAD dependent epimerase dehydratase family
PNEOPDPM_02135	1.29e-174	-	-	-	GM	-	-	-	COG4464 Capsular polysaccharide biosynthesis protein
PNEOPDPM_02136	0.0	-	-	-	DM	-	-	-	Chain length determinant protein
PNEOPDPM_02137	7.09e-180	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	COG1596 Periplasmic protein involved in polysaccharide export
PNEOPDPM_02138	2.5e-258	wecA	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_02139	2.46e-138	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02142	0.0	-	-	-	O	-	-	-	ATPase family associated with various cellular activities (AAA)
PNEOPDPM_02143	5.11e-114	-	-	-	S	-	-	-	Domain of unknown function (DUF4157)
PNEOPDPM_02144	0.0	-	-	-	D	-	-	-	peptidase
PNEOPDPM_02145	0.0	-	-	-	S	-	-	-	double-strand break repair
PNEOPDPM_02146	5.95e-175	-	-	-	-	-	-	-	-
PNEOPDPM_02147	0.0	-	-	-	S	-	-	-	homolog of phage Mu protein gp47
PNEOPDPM_02148	2.23e-97	-	-	-	S	ko:K06903	-	ko00000	Gene 25-like lysozyme
PNEOPDPM_02149	4.86e-69	-	-	-	S	-	-	-	PAAR motif
PNEOPDPM_02150	0.0	-	-	-	S	-	-	-	Phage late control gene D protein (GPD)
PNEOPDPM_02151	1.63e-159	-	-	-	S	-	-	-	LysM domain
PNEOPDPM_02152	4.32e-20	-	-	-	-	-	-	-	-
PNEOPDPM_02153	1.02e-112	-	-	-	I	-	-	-	T4-like virus tail tube protein gp19
PNEOPDPM_02154	4.7e-108	-	-	-	S	-	-	-	T4-like virus tail tube protein gp19
PNEOPDPM_02155	0.0	-	-	-	S	ko:K06907	-	ko00000	Phage tail sheath C-terminal domain
PNEOPDPM_02156	0.0	-	-	-	S	ko:K06907	-	ko00000	Phage tail sheath C-terminal domain
PNEOPDPM_02157	6.95e-194	-	-	-	-	-	-	-	-
PNEOPDPM_02158	3.69e-124	-	-	-	S	-	-	-	Protein of unknown function (DUF4255)
PNEOPDPM_02160	1.52e-111	-	-	-	-	-	-	-	-
PNEOPDPM_02162	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_02163	1.24e-177	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
PNEOPDPM_02164	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_02165	1.16e-238	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PNEOPDPM_02166	0.0	-	-	-	M	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3868)
PNEOPDPM_02167	8.08e-137	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_02169	2.31e-297	-	-	-	L	-	-	-	Phage integrase SAM-like domain
PNEOPDPM_02170	0.0	-	-	-	K	-	-	-	Helix-turn-helix domain
PNEOPDPM_02172	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_02173	5.8e-293	-	-	-	S	-	-	-	Protein of unknown function (DUF4876)
PNEOPDPM_02174	0.0	-	-	-	P	-	-	-	TonB-dependent receptor plug domain
PNEOPDPM_02175	7.27e-266	-	-	-	K	-	-	-	sequence-specific DNA binding
PNEOPDPM_02176	1.17e-92	-	-	-	KT	-	-	-	LytTr DNA-binding domain
PNEOPDPM_02178	1.45e-124	-	-	-	D	-	-	-	peptidase
PNEOPDPM_02179	1.02e-180	-	-	-	S	-	-	-	NigD-like N-terminal OB domain
PNEOPDPM_02180	3.39e-60	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_02181	6.13e-175	-	-	-	GM	-	-	-	COG4464 Capsular polysaccharide biosynthesis protein
PNEOPDPM_02182	0.0	-	-	-	DM	-	-	-	Chain length determinant protein
PNEOPDPM_02183	2.05e-182	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	Polysaccharide biosynthesis/export protein
PNEOPDPM_02184	1.18e-272	-	-	-	S	-	-	-	COG NOG33609 non supervised orthologous group
PNEOPDPM_02185	9.04e-299	-	-	-	-	-	-	-	-
PNEOPDPM_02186	5.49e-183	-	-	-	S	-	-	-	Exopolysaccharide biosynthesis protein YbjH
PNEOPDPM_02187	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNEOPDPM_02188	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PNEOPDPM_02191	1.04e-49	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PNEOPDPM_02192	1.48e-99	-	-	-	L	-	-	-	regulation of translation
PNEOPDPM_02193	1.4e-109	-	-	-	NU	ko:K02395	-	ko00000,ko02035	amidase activity
PNEOPDPM_02195	2.03e-312	pglE	-	-	E	-	-	-	DegT/DnrJ/EryC1/StrS aminotransferase family
PNEOPDPM_02196	4.51e-155	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
PNEOPDPM_02197	4.26e-245	neuD	-	-	HJ	ko:K19429	-	ko00000,ko01000	Bacterial transferase hexapeptide (six repeats)
PNEOPDPM_02198	5.55e-114	neuD	-	-	HJ	ko:K19429	-	ko00000,ko01000	Bacterial transferase hexapeptide (six repeats)
PNEOPDPM_02199	1.78e-145	pglC	2.7.8.36	-	M	ko:K15915	-	ko00000,ko01000	Bacterial sugar transferase
PNEOPDPM_02200	1.95e-272	-	-	-	M	-	-	-	Glycosyl transferase 4-like
PNEOPDPM_02201	1.16e-242	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PNEOPDPM_02202	2.08e-198	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PNEOPDPM_02203	3.87e-263	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_02204	3.07e-239	-	-	-	G	-	-	-	Acyltransferase family
PNEOPDPM_02205	1.25e-196	-	-	-	S	-	-	-	Protein of unknown function DUF115
PNEOPDPM_02206	0.0	-	-	-	S	-	-	-	polysaccharide biosynthetic process
PNEOPDPM_02207	8.68e-257	-	-	-	V	-	-	-	Glycosyl transferase, family 2
PNEOPDPM_02208	3.11e-271	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_02209	8.62e-137	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PNEOPDPM_02210	9.58e-268	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_02211	4.47e-229	-	-	-	GM	-	-	-	NAD dependent epimerase/dehydratase family
PNEOPDPM_02212	3.89e-269	rfbG	4.2.1.45	-	M	ko:K01709	ko00520,map00520	ko00000,ko00001,ko01000	Polysaccharide biosynthesis protein
PNEOPDPM_02213	9.18e-204	rfbF	2.7.7.33	-	JM	ko:K00978	ko00500,ko00520,ko01100,map00500,map00520,map01100	ko00000,ko00001,ko01000	Nucleotidyl transferase
PNEOPDPM_02214	2.24e-176	-	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase family
PNEOPDPM_02215	0.0	-	4.1.3.39	-	E	ko:K01666	ko00360,ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00360,map00362,map00621,map00622,map01100,map01120,map01220	br01602,ko00000,ko00001,ko00002,ko01000	HMGL-like
PNEOPDPM_02216	2.71e-179	kdsB	2.7.7.38	-	M	ko:K00979	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PNEOPDPM_02218	0.0	wbpM	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
PNEOPDPM_02219	1.24e-188	-	-	-	-	-	-	-	-
PNEOPDPM_02220	1.96e-311	-	-	-	S	-	-	-	AAA ATPase domain
PNEOPDPM_02221	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PNEOPDPM_02222	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PNEOPDPM_02223	1.53e-74	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PNEOPDPM_02225	3.65e-222	-	-	-	S	-	-	-	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PNEOPDPM_02226	0.0	-	-	-	P	-	-	-	cytochrome c peroxidase
PNEOPDPM_02227	0.0	-	-	-	U	-	-	-	Involved in the tonB-independent uptake of proteins
PNEOPDPM_02228	1.28e-157	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PNEOPDPM_02229	2.58e-252	-	-	-	E	-	-	-	Zinc-binding dehydrogenase
PNEOPDPM_02230	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	FGGY family of carbohydrate kinases, N-terminal domain
PNEOPDPM_02231	1.23e-115	-	-	-	-	-	-	-	-
PNEOPDPM_02232	2.5e-95	-	-	-	-	-	-	-	-
PNEOPDPM_02233	2.52e-264	-	-	-	G	-	-	-	SMP-30/Gluconolaconase/LRE-like region
PNEOPDPM_02234	0.0	-	-	-	G	-	-	-	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PNEOPDPM_02235	1.1e-135	-	-	-	G	-	-	-	alpha-L-rhamnosidase
PNEOPDPM_02236	1.7e-168	-	-	-	G	-	-	-	family 2, sugar binding domain
PNEOPDPM_02237	2.45e-58	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_02239	0.0	-	-	-	MU	-	-	-	Outer membrane efflux protein
PNEOPDPM_02240	0.0	-	-	-	T	ko:K02481	-	ko00000,ko02022	Sigma-54 interaction domain
PNEOPDPM_02241	2.88e-308	-	-	-	T	-	-	-	PAS domain
PNEOPDPM_02242	7.99e-293	-	-	-	L	-	-	-	Phage integrase SAM-like domain
PNEOPDPM_02243	1.52e-193	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_02244	0.0	-	-	-	M	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3868)
PNEOPDPM_02245	2.53e-242	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PNEOPDPM_02246	1.03e-202	-	-	-	S	-	-	-	KilA-N domain
PNEOPDPM_02247	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_02248	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_02249	4.89e-70	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_02250	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_02251	4.85e-184	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
PNEOPDPM_02252	0.0	-	-	-	S	-	-	-	Predicted AAA-ATPase
PNEOPDPM_02253	4.27e-222	-	-	-	S	-	-	-	COG NOG38781 non supervised orthologous group
PNEOPDPM_02254	0.0	-	-	-	S	-	-	-	Sulfatase-modifying factor enzyme 1
PNEOPDPM_02255	1.73e-219	-	-	-	K	-	-	-	AraC-like ligand binding domain
PNEOPDPM_02256	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_02257	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 2
PNEOPDPM_02258	5.72e-62	-	-	-	-	-	-	-	-
PNEOPDPM_02260	6.3e-222	nlpD_2	-	-	M	-	-	-	Peptidase family M23
PNEOPDPM_02261	6.27e-293	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
PNEOPDPM_02262	1.44e-187	uxuB	-	-	IQ	-	-	-	KR domain
PNEOPDPM_02263	4.32e-258	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PNEOPDPM_02264	2.91e-139	-	-	-	-	-	-	-	-
PNEOPDPM_02265	1.36e-266	mtrC	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_02266	0.0	mexF	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PNEOPDPM_02267	9.06e-313	-	-	-	MU	-	-	-	Efflux transporter, outer membrane factor
PNEOPDPM_02268	1.03e-164	lpxA2	2.3.1.129	-	M	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	ko00000,ko00001,ko00002,ko01000,ko01005	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PNEOPDPM_02270	0.0	-	-	-	E	-	-	-	non supervised orthologous group
PNEOPDPM_02271	0.0	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_02273	1.44e-181	-	-	-	-	-	-	-	-
PNEOPDPM_02274	2.15e-281	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PNEOPDPM_02275	1.62e-161	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PNEOPDPM_02276	1.27e-118	yncA	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
PNEOPDPM_02277	3.22e-217	mdh	1.1.1.37	-	C	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible oxidation of malate to oxaloacetate
PNEOPDPM_02278	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_02279	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_02280	0.0	glgP	2.4.1.1, 2.4.1.11, 2.4.1.8	GH65,GT3,GT35	G	ko:K00688,ko:K00691,ko:K16153	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000,ko01003	alpha-glucan phosphorylase
PNEOPDPM_02281	0.0	-	2.4.1.11	GT3	G	ko:K00693	ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931	ko00000,ko00001,ko01000,ko01003	starch synthase
PNEOPDPM_02282	3.65e-60	-	-	-	S	-	-	-	COG NOG23371 non supervised orthologous group
PNEOPDPM_02283	1.39e-134	-	-	-	I	-	-	-	Acyltransferase
PNEOPDPM_02284	7.82e-196	ramA_1	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Hydrolase, carbon-nitrogen family
PNEOPDPM_02285	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PNEOPDPM_02286	0.0	-	-	-	S	-	-	-	Putative oxidoreductase C terminal domain
PNEOPDPM_02287	1.22e-272	-	-	-	S	-	-	-	ATPase domain predominantly from Archaea
PNEOPDPM_02288	3.74e-308	-	-	-	S	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
PNEOPDPM_02289	0.0	-	-	-	H	-	-	-	Susd and RagB outer membrane lipoprotein
PNEOPDPM_02290	0.0	-	-	-	H	-	-	-	Carboxypeptidase regulatory-like domain
PNEOPDPM_02291	4.7e-206	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PNEOPDPM_02292	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl-hydrolase 97 C-terminal, oligomerisation
PNEOPDPM_02293	0.0	-	-	-	S	-	-	-	Heparinase II/III-like protein
PNEOPDPM_02294	0.0	-	-	-	P	-	-	-	Right handed beta helix region
PNEOPDPM_02297	0.0	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	DnaB-like helicase N terminal domain
PNEOPDPM_02298	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNEOPDPM_02299	8.81e-98	-	-	-	L	-	-	-	regulation of translation
PNEOPDPM_02300	4.61e-57	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PNEOPDPM_02301	8.79e-108	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PNEOPDPM_02303	8.31e-225	-	-	-	K	-	-	-	AraC-like ligand binding domain
PNEOPDPM_02305	2.08e-77	-	-	-	S	-	-	-	Lipocalin-like
PNEOPDPM_02306	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 38 C-terminal domain
PNEOPDPM_02307	1.19e-315	-	-	-	H	-	-	-	to Methylobacterium sp. CmuC protein SWALL Q9X7G6 (EMBL AJ011317) (378 aa) fasta scores E()
PNEOPDPM_02308	4.65e-141	-	-	-	S	-	-	-	B12 binding domain
PNEOPDPM_02309	1.06e-162	-	-	-	E	-	-	-	Vitamin B12 dependent methionine synthase, activation domain
PNEOPDPM_02310	2.85e-242	-	-	-	H	-	-	-	Uroporphyrinogen decarboxylase (URO-D)
PNEOPDPM_02311	0.0	glnA	6.3.1.2	-	S	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Belongs to the glutamine synthetase family
PNEOPDPM_02312	1.51e-211	-	-	-	CO	-	-	-	amine dehydrogenase activity
PNEOPDPM_02313	0.0	hppA	3.6.1.1	-	C	ko:K15987	ko00190,map00190	ko00000,ko00001,ko01000	Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane
PNEOPDPM_02314	3.18e-200	-	-	-	S	ko:K07001	-	ko00000	Phospholipase
PNEOPDPM_02315	0.0	amyA2	-	-	G	-	-	-	Alpha amylase, catalytic domain protein
PNEOPDPM_02316	3.5e-221	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PNEOPDPM_02317	2.39e-60	marR	-	-	K	-	-	-	Winged helix DNA-binding domain
PNEOPDPM_02318	1.77e-144	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PNEOPDPM_02319	0.0	-	-	-	H	-	-	-	Outer membrane protein beta-barrel family
PNEOPDPM_02320	1.71e-83	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2141)
PNEOPDPM_02322	1.86e-09	-	-	-	-	-	-	-	-
PNEOPDPM_02323	2.19e-274	trmU	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PNEOPDPM_02324	0.0	-	3.4.14.4	-	S	ko:K01277	-	ko00000,ko01000,ko01002	Peptidase family M49
PNEOPDPM_02325	1.83e-164	-	-	-	L	-	-	-	DNA alkylation repair enzyme
PNEOPDPM_02326	2.69e-109	fur	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PNEOPDPM_02327	3.64e-315	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PNEOPDPM_02328	3.25e-154	-	-	-	S	ko:K06973	-	ko00000	Putative neutral zinc metallopeptidase
PNEOPDPM_02330	0.0	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PNEOPDPM_02331	7.44e-84	-	-	-	K	-	-	-	Helix-turn-helix domain
PNEOPDPM_02333	3.77e-97	-	-	-	S	ko:K15977	-	ko00000	DoxX
PNEOPDPM_02335	2.48e-253	asnA	6.3.1.1	-	E	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
PNEOPDPM_02336	9.51e-168	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PNEOPDPM_02337	0.0	-	-	-	M	-	-	-	Psort location OuterMembrane, score
PNEOPDPM_02338	5.04e-132	-	-	-	T	ko:K06950	-	ko00000	HDIG domain protein
PNEOPDPM_02339	4.9e-33	-	-	-	-	-	-	-	-
PNEOPDPM_02340	2.13e-299	-	-	-	S	-	-	-	Protein of unknown function (DUF1343)
PNEOPDPM_02341	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
PNEOPDPM_02342	5.06e-261	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
PNEOPDPM_02344	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_02345	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	PFAM RagB SusD
PNEOPDPM_02347	7.48e-147	-	-	-	-	-	-	-	-
PNEOPDPM_02348	1.26e-100	-	-	-	O	-	-	-	META domain
PNEOPDPM_02349	1.97e-92	-	-	-	O	-	-	-	META domain
PNEOPDPM_02350	6.31e-312	-	-	-	M	-	-	-	Peptidase family M23
PNEOPDPM_02351	9.61e-84	yccF	-	-	S	-	-	-	Inner membrane component domain
PNEOPDPM_02352	1.25e-164	ddpX	3.4.13.22	-	M	ko:K08641	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PNEOPDPM_02353	1.26e-205	murI	5.1.1.3	-	M	ko:K01776	ko00471,ko01100,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PNEOPDPM_02354	7.51e-105	ompH	-	-	M	ko:K06142	-	ko00000	Outer membrane protein (OmpH-like)
PNEOPDPM_02355	6.65e-110	ompH	-	-	M	ko:K06142	-	ko00000	membrane
PNEOPDPM_02356	0.0	yaeT	-	-	M	ko:K07277	-	ko00000,ko02000,ko03029	membrane
PNEOPDPM_02357	1.56e-175	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PNEOPDPM_02358	4.34e-178	-	-	-	M	-	-	-	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PNEOPDPM_02359	0.0	-	-	-	G	-	-	-	COG NOG27066 non supervised orthologous group
PNEOPDPM_02360	8.71e-258	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PNEOPDPM_02361	5.51e-204	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PNEOPDPM_02362	9.28e-108	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
PNEOPDPM_02363	3.31e-150	comF	2.4.2.14	-	S	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Phosphoribosyl transferase domain
PNEOPDPM_02364	7.75e-126	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PNEOPDPM_02365	7.21e-35	-	-	-	-	-	-	-	-
PNEOPDPM_02366	2.81e-58	-	-	-	-	-	-	-	-
PNEOPDPM_02367	4.23e-316	-	-	-	L	-	-	-	Protein of unknown function (DUF3987)
PNEOPDPM_02368	5.74e-79	ogt	2.1.1.63	-	L	ko:K00567,ko:K07443	-	ko00000,ko01000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
PNEOPDPM_02369	1.36e-209	-	-	-	-	-	-	-	-
PNEOPDPM_02370	1.21e-287	-	-	-	S	ko:K07079	-	ko00000	Aldo/keto reductase family
PNEOPDPM_02371	9.3e-310	-	-	-	S	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_02372	3.65e-122	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PNEOPDPM_02373	2.25e-205	-	-	-	PT	-	-	-	FecR protein
PNEOPDPM_02374	0.0	-	-	-	S	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_02375	1.01e-77	queD	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
PNEOPDPM_02376	2.4e-135	queE	4.3.99.3	-	H	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PNEOPDPM_02377	0.0	-	-	-	P	-	-	-	Outer membrane protein beta-barrel family
PNEOPDPM_02378	0.0	-	-	-	P	-	-	-	Sodium:sulfate symporter transmembrane region
PNEOPDPM_02379	1.46e-237	-	-	-	S	ko:K01163	-	ko00000	Uncharacterised conserved protein (DUF2156)
PNEOPDPM_02380	1.58e-237	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PNEOPDPM_02381	2.58e-65	-	-	-	K	ko:K21498	-	ko00000,ko02048	Addiction module antidote protein, HigA
PNEOPDPM_02382	3.77e-68	-	-	-	S	ko:K07334	-	ko00000,ko02048	RelE-like toxin of type II toxin-antitoxin system HigB
PNEOPDPM_02384	1.37e-212	-	-	-	S	-	-	-	Glycosyltransferase family 6
PNEOPDPM_02385	6.06e-221	-	-	-	H	-	-	-	Glycosyl transferase family 11
PNEOPDPM_02386	4.5e-301	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_02387	2.26e-247	-	-	-	GM	-	-	-	3-beta hydroxysteroid dehydrogenase/isomerase family
PNEOPDPM_02388	3.07e-263	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_02389	1.66e-130	-	-	-	S	-	-	-	Hexapeptide repeat of succinyl-transferase
PNEOPDPM_02390	2.32e-184	-	-	GT25	M	ko:K07270	-	ko00000	Glycosyltransferase family 25 (LPS biosynthesis protein)
PNEOPDPM_02391	0.0	-	-	-	DM	-	-	-	Chain length determinant protein
PNEOPDPM_02392	5.24e-185	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	COG1596 Periplasmic protein involved in polysaccharide export
PNEOPDPM_02393	8.39e-180	-	-	GT25	M	ko:K07270	-	ko00000	Glycosyltransferase family 25 (LPS biosynthesis protein)
PNEOPDPM_02394	1.15e-67	-	-	-	L	-	-	-	Bacterial DNA-binding protein
PNEOPDPM_02395	2.88e-249	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PNEOPDPM_02396	5.61e-222	-	-	-	S	-	-	-	Sulfotransferase domain
PNEOPDPM_02397	6.63e-281	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PNEOPDPM_02399	9.38e-297	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNEOPDPM_02400	1.41e-196	-	-	-	S	-	-	-	Sulfotransferase family
PNEOPDPM_02401	0.0	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	DnaB-like helicase N terminal domain
PNEOPDPM_02404	4.06e-245	-	2.4.1.152, 2.4.1.65	GT10	S	ko:K20151	-	ko00000,ko01000,ko01003	Glycosyltransferase family 10 (fucosyltransferase) C-term
PNEOPDPM_02405	1.75e-276	-	-	-	M	-	-	-	COG NOG23378 non supervised orthologous group
PNEOPDPM_02406	7.81e-303	-	-	-	S	-	-	-	Predicted AAA-ATPase
PNEOPDPM_02407	2.85e-52	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PNEOPDPM_02408	0.0	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_02409	1.03e-241	-	-	-	-	-	-	-	-
PNEOPDPM_02410	2.76e-220	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_02411	7.26e-265	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_02413	1.57e-280	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_02414	5.9e-195	-	-	-	-	-	-	-	-
PNEOPDPM_02415	7.39e-191	-	-	-	-	-	-	-	-
PNEOPDPM_02416	1.21e-217	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_02417	2.36e-246	-	-	-	-	-	-	-	-
PNEOPDPM_02418	4.86e-279	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
PNEOPDPM_02419	1.17e-56	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_02420	5.29e-29	-	-	-	S	-	-	-	Histone H1-like protein Hc1
PNEOPDPM_02424	3.91e-95	-	-	-	S	-	-	-	COG NOG30410 non supervised orthologous group
PNEOPDPM_02425	1.83e-278	madB	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	Na+-transporting oxaloacetate decarboxylase beta subunit
PNEOPDPM_02426	1.47e-285	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PNEOPDPM_02427	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PNEOPDPM_02428	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Belongs to the ClpA ClpB family
PNEOPDPM_02429	0.0	htpG	-	-	O	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	Molecular chaperone HSP90
PNEOPDPM_02430	6.82e-273	-	-	-	S	-	-	-	von Willebrand factor (vWF) type A domain
PNEOPDPM_02431	0.0	-	-	-	T	-	-	-	Histidine kinase
PNEOPDPM_02432	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF5110)
PNEOPDPM_02433	3.28e-180	-	-	-	T	ko:K02477	-	ko00000,ko02022	LytTr DNA-binding domain
PNEOPDPM_02434	2.26e-211	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PNEOPDPM_02435	4.08e-47	-	-	-	S	-	-	-	Winged helix-turn-helix domain (DUF2582)
PNEOPDPM_02436	4.01e-199	-	2.7.1.33	-	H	ko:K09680	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Fumble
PNEOPDPM_02437	5.25e-127	marC	-	-	U	ko:K05595	-	ko00000,ko02000	UPF0056 membrane protein
PNEOPDPM_02438	5.54e-266	-	-	-	L	-	-	-	Phage integrase SAM-like domain
PNEOPDPM_02439	1.73e-63	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_02440	1.04e-34	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
PNEOPDPM_02441	3.98e-185	-	-	-	-	-	-	-	-
PNEOPDPM_02442	0.0	-	-	-	S	-	-	-	hydrolase activity, acting on glycosyl bonds
PNEOPDPM_02443	3.95e-82	-	-	-	O	-	-	-	Thioredoxin
PNEOPDPM_02444	1.9e-154	sodB	1.15.1.1	-	C	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PNEOPDPM_02445	7.45e-129	-	4.1.1.19	-	S	ko:K02626	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	arginine decarboxylase
PNEOPDPM_02446	1.62e-115	-	-	-	Q	-	-	-	Thioesterase superfamily
PNEOPDPM_02447	9.55e-206	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PNEOPDPM_02448	0.0	-	-	-	P	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_02449	0.0	-	-	-	M	-	-	-	Dipeptidase
PNEOPDPM_02450	1.72e-114	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
PNEOPDPM_02451	9.6e-269	-	-	-	-	-	-	-	-
PNEOPDPM_02453	1.88e-182	-	-	-	-	-	-	-	-
PNEOPDPM_02454	4.19e-153	pgmB	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PNEOPDPM_02455	0.0	-	-	-	G	-	-	-	Domain of Unknown Function (DUF1080)
PNEOPDPM_02456	0.0	arnT	-	-	M	-	-	-	Dolichyl-phosphate-mannose-protein mannosyltransferase
PNEOPDPM_02457	0.0	-	-	-	P	-	-	-	Protein of unknown function (DUF4435)
PNEOPDPM_02458	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Bacterial alpha-L-rhamnosidase C-terminal domain
PNEOPDPM_02459	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)
PNEOPDPM_02460	8.37e-296	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PNEOPDPM_02461	2.02e-268	-	-	-	S	-	-	-	NPCBM-associated, NEW3 domain of alpha-galactosidase
PNEOPDPM_02462	5.04e-176	yxlF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PNEOPDPM_02463	1.21e-219	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PNEOPDPM_02464	1.1e-107	-	-	-	J	-	-	-	Threonyl and Alanyl tRNA synthetase second additional domain
PNEOPDPM_02465	5.11e-267	wecD	-	-	JM	-	-	-	Acetyltransferase (GNAT) domain
PNEOPDPM_02466	2e-120	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
PNEOPDPM_02467	6.61e-191	panB	2.1.2.11	-	H	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PNEOPDPM_02468	0.0	cbiA	6.3.5.11, 6.3.5.9	-	H	ko:K02224	ko00860,ko01100,ko01120,map00860,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
PNEOPDPM_02469	3.56e-180	-	-	-	L	-	-	-	DNA alkylation repair enzyme
PNEOPDPM_02470	8.17e-103	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PNEOPDPM_02471	6.65e-234	yqiK	-	-	S	ko:K07192	ko04910,map04910	ko00000,ko00001,ko03036,ko04131,ko04147	Flotillin
PNEOPDPM_02472	1.13e-133	-	-	-	S	-	-	-	ATP cob(I)alamin adenosyltransferase
PNEOPDPM_02473	1.47e-246	tagO	-	-	M	-	-	-	UDP-N-acetylmuramyl pentapeptide phosphotransferase
PNEOPDPM_02474	1.82e-296	-	-	-	S	-	-	-	Predicted AAA-ATPase
PNEOPDPM_02477	2.7e-264	-	2.4.1.319, 2.4.1.320	-	G	ko:K18785	-	ko00000,ko01000	beta-1,4-mannooligosaccharide phosphorylase
PNEOPDPM_02478	0.0	-	-	-	E	-	-	-	Sodium:solute symporter family
PNEOPDPM_02479	2.47e-221	-	-	-	S	-	-	-	COG NOG38781 non supervised orthologous group
PNEOPDPM_02480	1.59e-210	-	2.3.1.245	-	G	ko:K08321	ko02024,map02024	ko00000,ko00001,ko01000	DeoC/LacD family aldolase
PNEOPDPM_02481	2.81e-134	-	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	DAK2 domain protein
PNEOPDPM_02482	3.2e-241	-	2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15	-	G	ko:K00863,ko:K05878	ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02483	1.64e-72	-	-	-	-	-	-	-	-
PNEOPDPM_02484	0.0	ccmC	-	-	O	-	-	-	cytochrome c-type biogenesis protein CcsB
PNEOPDPM_02485	0.0	-	-	-	S	-	-	-	NPCBM/NEW2 domain
PNEOPDPM_02486	6.02e-163	-	5.3.1.15	-	S	ko:K09988	ko00040,map00040	ko00000,ko00001,ko01000	ABC-type sugar transport system, auxiliary component
PNEOPDPM_02487	1.31e-269	-	-	-	J	-	-	-	endoribonuclease L-PSP
PNEOPDPM_02488	0.0	-	-	-	C	-	-	-	cytochrome c peroxidase
PNEOPDPM_02489	3.18e-195	-	-	-	K	ko:K13641,ko:K19333	-	ko00000,ko03000	helix_turn_helix isocitrate lyase regulation
PNEOPDPM_02490	6.75e-247	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PNEOPDPM_02491	1.68e-239	ybhS	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
PNEOPDPM_02492	5.04e-175	-	-	-	G	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PNEOPDPM_02493	4.6e-219	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PNEOPDPM_02494	2e-211	-	-	-	M	ko:K01993	-	ko00000	HlyD family secretion protein
PNEOPDPM_02495	2.18e-306	-	-	-	MU	-	-	-	Outer membrane efflux protein
PNEOPDPM_02496	8.42e-149	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNEOPDPM_02497	3.96e-296	sdaA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase
PNEOPDPM_02498	7.74e-280	-	-	-	S	-	-	-	COGs COG4299 conserved
PNEOPDPM_02499	3.22e-269	-	-	-	S	-	-	-	Domain of unknown function (DUF5009)
PNEOPDPM_02500	0.0	cobQ	6.3.5.10	-	H	ko:K02232	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
PNEOPDPM_02501	8.11e-191	-	-	-	GM	-	-	-	COG4464 Capsular polysaccharide biosynthesis protein
PNEOPDPM_02502	6.28e-116	-	-	-	K	-	-	-	Transcription termination factor nusG
PNEOPDPM_02503	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PNEOPDPM_02504	0.0	-	-	-	T	-	-	-	PAS domain
PNEOPDPM_02505	9.18e-188	-	-	-	L	-	-	-	Helicase associated domain
PNEOPDPM_02506	0.0	-	3.1.1.11	-	G	ko:K01051	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Domain of unknown function (DUF4861)
PNEOPDPM_02508	2.36e-116	-	-	-	-	-	-	-	-
PNEOPDPM_02509	1.64e-51	-	-	-	S	-	-	-	Divergent 4Fe-4S mono-cluster
PNEOPDPM_02510	5.28e-68	-	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
PNEOPDPM_02511	9.18e-49	-	-	-	S	-	-	-	Winged helix-turn-helix domain (DUF2582)
PNEOPDPM_02512	0.0	-	-	-	MP	ko:K07798	ko02020,map02020	ko00000,ko00001,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_02513	0.0	-	-	-	MU	-	-	-	Outer membrane efflux protein
PNEOPDPM_02514	0.0	-	-	-	P	ko:K07787,ko:K15726	ko02020,map02020	ko00000,ko00001,ko02000	AcrB/AcrD/AcrF family
PNEOPDPM_02515	5.31e-20	-	-	-	-	-	-	-	-
PNEOPDPM_02516	2.08e-138	-	-	-	L	-	-	-	Resolvase, N terminal domain
PNEOPDPM_02517	7.46e-258	corA	-	-	P	ko:K03284	-	ko00000,ko02000	Mediates influx of magnesium ions
PNEOPDPM_02518	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PNEOPDPM_02519	0.0	-	-	-	M	-	-	-	PDZ DHR GLGF domain protein
PNEOPDPM_02520	2.85e-129	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PNEOPDPM_02521	2.4e-258	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PNEOPDPM_02523	1.13e-223	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	2-nitropropane dioxygenase
PNEOPDPM_02524	0.0	-	3.4.15.5	-	E	ko:K01284	-	ko00000,ko01000,ko01002	Peptidase family M3
PNEOPDPM_02525	0.0	-	3.4.15.5	-	E	ko:K01284	-	ko00000,ko01000,ko01002	Peptidase family M3
PNEOPDPM_02526	4.82e-227	lacX	-	-	G	-	-	-	Aldose 1-epimerase
PNEOPDPM_02527	0.0	porU	-	-	S	-	-	-	Peptidase family C25
PNEOPDPM_02528	2.74e-243	gpr	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo/keto reductase family
PNEOPDPM_02529	0.0	-	-	-	L	-	-	-	PD-(D/E)XK nuclease superfamily
PNEOPDPM_02530	4.15e-171	-	-	-	S	-	-	-	Outer membrane protein beta-barrel domain
PNEOPDPM_02531	1.38e-142	-	-	-	S	-	-	-	flavin reductase
PNEOPDPM_02532	1.7e-106	pyrI	-	-	F	ko:K00610	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002	Involved in allosteric regulation of aspartate carbamoyltransferase
PNEOPDPM_02533	7.4e-191	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PNEOPDPM_02534	0.0	-	-	-	S	-	-	-	Predicted AAA-ATPase
PNEOPDPM_02535	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PNEOPDPM_02536	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PNEOPDPM_02537	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_02538	0.0	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_02539	1.71e-238	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PNEOPDPM_02540	2.45e-122	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, Bacteroides expansion family 1
PNEOPDPM_02541	0.0	-	-	-	G	-	-	-	COG COG0383 Alpha-mannosidase
PNEOPDPM_02542	4.46e-256	-	-	-	G	-	-	-	Major Facilitator
PNEOPDPM_02543	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PNEOPDPM_02544	1.77e-261	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PNEOPDPM_02545	0.0	-	-	-	G	-	-	-	mannose-6-phosphate isomerase, class I
PNEOPDPM_02546	0.0	-	-	-	G	-	-	-	lipolytic protein G-D-S-L family
PNEOPDPM_02547	0.0	-	-	-	S	ko:K06894	-	ko00000	Alpha-2-Macroglobulin
PNEOPDPM_02549	0.0	pbpC	2.4.1.129	GT51	M	ko:K05367	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin-Binding Protein C-terminus Family
PNEOPDPM_02550	1.25e-146	-	-	-	-	-	-	-	-
PNEOPDPM_02552	1.1e-277	-	-	-	S	-	-	-	AAA ATPase domain
PNEOPDPM_02553	2.25e-210	-	-	-	S	-	-	-	Peptidase M15
PNEOPDPM_02554	7.61e-102	-	-	-	L	-	-	-	DNA-binding protein
PNEOPDPM_02555	4.91e-137	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PNEOPDPM_02556	2.39e-212	-	-	-	S	ko:K06872	-	ko00000	TPM domain
PNEOPDPM_02557	5.39e-116	hndA	1.12.1.3	-	C	ko:K18330	-	ko00000,ko01000	Thioredoxin-like [2Fe-2S] ferredoxin
PNEOPDPM_02558	0.0	hndD	1.12.1.3, 1.17.1.9	-	C	ko:K00123,ko:K18332	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	Iron hydrogenase small subunit
PNEOPDPM_02559	0.0	nuoF	1.12.1.3, 1.6.5.3	-	C	ko:K00335,ko:K18331	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PNEOPDPM_02560	4.6e-89	-	1.12.1.3	-	C	ko:K17992	-	ko00000,ko01000	Ferredoxin
PNEOPDPM_02561	8.89e-215	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Serine acetyltransferase
PNEOPDPM_02562	0.0	-	-	-	S	-	-	-	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
PNEOPDPM_02563	3.72e-237	-	-	-	S	ko:K07126	-	ko00000	beta-lactamase activity
PNEOPDPM_02564	0.0	-	2.7.11.1	-	KLT	ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
PNEOPDPM_02565	1.35e-195	-	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	Serine/threonine phosphatases, family 2C, catalytic domain
PNEOPDPM_02566	3.45e-121	-	-	-	T	-	-	-	FHA domain
PNEOPDPM_02568	1.58e-160	-	-	-	T	-	-	-	Inner membrane component of T3SS, cytoplasmic domain
PNEOPDPM_02569	1.73e-84	-	-	-	K	-	-	-	LytTr DNA-binding domain
PNEOPDPM_02570	7.13e-228	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_02572	0.0	ppdK	2.7.9.1	-	G	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the PEP-utilizing enzyme family
PNEOPDPM_02573	0.0	rumA	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PNEOPDPM_02574	0.0	mltF	-	-	M	ko:K18691	-	ko00000,ko01000,ko01011	Transglycosylase SLT domain
PNEOPDPM_02575	1.06e-121	-	-	-	T	-	-	-	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PNEOPDPM_02576	5.67e-178	-	-	-	S	-	-	-	DNA polymerase alpha chain like domain
PNEOPDPM_02577	7.63e-74	-	-	-	K	-	-	-	DRTGG domain
PNEOPDPM_02578	0.0	-	-	-	C	-	-	-	Iron only hydrogenase large subunit, C-terminal domain
PNEOPDPM_02579	6.37e-93	-	-	-	T	-	-	-	Histidine kinase-like ATPase domain
PNEOPDPM_02580	3.33e-78	-	-	-	K	-	-	-	DRTGG domain
PNEOPDPM_02581	0.0	pepP	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	Aminopeptidase P, N-terminal domain
PNEOPDPM_02582	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PNEOPDPM_02583	1.36e-111	-	-	-	O	-	-	-	Thioredoxin-like
PNEOPDPM_02584	1.25e-124	-	-	-	S	-	-	-	COG NOG28134 non supervised orthologous group
PNEOPDPM_02585	1.18e-303	-	-	-	M	-	-	-	COG NOG24980 non supervised orthologous group
PNEOPDPM_02586	6.59e-227	-	-	-	S	-	-	-	COG NOG26135 non supervised orthologous group
PNEOPDPM_02587	6.37e-280	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_02588	2.02e-52	-	-	-	-	-	-	-	-
PNEOPDPM_02589	4.63e-175	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
PNEOPDPM_02590	9.72e-80	-	-	-	-	-	-	-	-
PNEOPDPM_02591	2.05e-191	-	-	-	S	-	-	-	COG3943 Virulence protein
PNEOPDPM_02592	8.68e-142	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02593	4.01e-23	-	-	-	S	-	-	-	PFAM Fic DOC family
PNEOPDPM_02594	5.37e-108	-	-	-	H	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PNEOPDPM_02595	1.27e-221	-	-	-	L	-	-	-	DNA repair photolyase K01669
PNEOPDPM_02596	4.96e-159	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02597	2.41e-189	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02598	8.91e-217	-	-	-	K	ko:K18954	-	ko00000,ko03000	methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family) K00567
PNEOPDPM_02599	2.56e-162	-	-	-	K	-	-	-	methylphosphotriester-DNA alkyltransferase (AraC XylS family) K00567
PNEOPDPM_02600	6.87e-229	-	-	-	U	-	-	-	Relaxase mobilization nuclease domain protein
PNEOPDPM_02601	1.38e-89	-	-	-	S	-	-	-	Bacterial mobilization protein MobC
PNEOPDPM_02602	1.72e-99	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02603	2.62e-78	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02604	7.37e-293	-	-	-	-	-	-	-	-
PNEOPDPM_02605	4.17e-143	radC	-	-	L	ko:K03630	-	ko00000	COG2003 DNA repair
PNEOPDPM_02606	1.03e-87	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PNEOPDPM_02607	2.19e-96	-	-	-	-	-	-	-	-
PNEOPDPM_02608	4.37e-135	-	-	-	L	-	-	-	Resolvase, N terminal domain
PNEOPDPM_02609	1.75e-73	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02610	1.69e-152	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02611	9.43e-52	-	-	-	T	ko:K07172	-	ko00000,ko02048	Transcriptional regulator antitoxin, MazE
PNEOPDPM_02612	1.85e-69	mazF	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
PNEOPDPM_02613	5.37e-97	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02615	6.69e-191	-	-	-	-	-	-	-	-
PNEOPDPM_02616	6.89e-112	-	-	-	-	-	-	-	-
PNEOPDPM_02617	2.49e-181	-	-	-	-	-	-	-	-
PNEOPDPM_02618	1.02e-235	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02619	1.34e-51	-	-	-	T	ko:K07172	-	ko00000,ko02048	Transcriptional regulator antitoxin, MazE
PNEOPDPM_02620	1.3e-69	mazF	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
PNEOPDPM_02621	4.52e-100	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02622	1.83e-59	hupA	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	bacterial (prokaryotic) histone like domain
PNEOPDPM_02623	7.93e-59	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02624	1.99e-91	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02625	3.14e-80	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02626	3.79e-52	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02627	5.69e-09	-	-	-	-	-	-	-	-
PNEOPDPM_02628	1.44e-114	-	-	-	-	-	-	-	-
PNEOPDPM_02630	1.19e-176	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction enzyme
PNEOPDPM_02631	7.21e-72	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02632	1.76e-79	-	-	-	-	-	-	-	-
PNEOPDPM_02633	0.0	-	-	-	S	-	-	-	ATP-binding cassette protein, ChvD family
PNEOPDPM_02634	3.08e-159	-	-	-	S	-	-	-	Domain of Unknown Function (DUF1080)
PNEOPDPM_02635	0.0	mscM	-	-	M	-	-	-	Mechanosensitive ion channel
PNEOPDPM_02637	7.08e-68	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_02638	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
PNEOPDPM_02641	6.51e-176	-	-	-	-	-	-	-	-
PNEOPDPM_02643	4.94e-267	-	-	-	S	-	-	-	Major fimbrial subunit protein (FimA)
PNEOPDPM_02644	6.3e-221	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PNEOPDPM_02646	2.49e-278	-	-	-	S	-	-	-	Major fimbrial subunit protein (FimA)
PNEOPDPM_02647	2.52e-282	-	-	-	S	-	-	-	Major fimbrial subunit protein (FimA)
PNEOPDPM_02648	0.0	-	-	-	T	-	-	-	cheY-homologous receiver domain
PNEOPDPM_02649	2.96e-55	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_02650	2.66e-247	-	-	-	S	-	-	-	Major fimbrial subunit protein (FimA)
PNEOPDPM_02651	2.82e-190	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PNEOPDPM_02652	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_02654	1.79e-210	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PNEOPDPM_02655	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PNEOPDPM_02656	3.1e-217	corA	-	-	P	ko:K03284	-	ko00000,ko02000	Transporter
PNEOPDPM_02657	0.0	-	-	-	S	-	-	-	Major fimbrial subunit protein (FimA)
PNEOPDPM_02658	4.66e-233	-	-	-	U	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3868)
PNEOPDPM_02659	2.46e-138	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PNEOPDPM_02660	1.56e-95	xynB	-	-	I	-	-	-	alpha/beta hydrolase fold
PNEOPDPM_02661	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Bacterial alpha-L-rhamnosidase C-terminal domain
PNEOPDPM_02662	0.0	-	-	-	G	-	-	-	alpha-L-rhamnosidase
PNEOPDPM_02663	1.17e-129	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PNEOPDPM_02664	1.23e-223	-	-	-	PT	-	-	-	COG3712 Fe2 -dicitrate sensor, membrane component
PNEOPDPM_02665	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_02666	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_02667	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF4838)
PNEOPDPM_02668	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 2, sugar binding domain protein
PNEOPDPM_02669	0.0	-	-	-	G	-	-	-	Beta-galactosidase
PNEOPDPM_02670	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PNEOPDPM_02671	0.0	-	3.2.1.35	-	G	ko:K01197	ko00531,ko01100,map00531,map01100	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylglucosaminidase
PNEOPDPM_02672	0.0	-	-	-	G	-	-	-	Beta galactosidase small chain
PNEOPDPM_02673	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_02675	3.25e-192	rpoD	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PNEOPDPM_02677	0.0	degQ	-	-	O	-	-	-	deoxyribonuclease HsdR
PNEOPDPM_02678	0.0	yihY	-	-	S	ko:K07058	-	ko00000	ribonuclease BN
PNEOPDPM_02679	1.77e-315	-	-	-	V	-	-	-	Polysaccharide biosynthesis C-terminal domain
PNEOPDPM_02680	4.22e-143	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	riboflavin synthase subunit alpha
PNEOPDPM_02681	7.02e-75	-	-	-	S	-	-	-	TM2 domain
PNEOPDPM_02682	4.56e-87	-	-	-	S	-	-	-	Protein of unknown function (DUF2752)
PNEOPDPM_02683	7.99e-75	-	-	-	S	-	-	-	TM2 domain protein
PNEOPDPM_02684	2.41e-148	-	-	-	-	-	-	-	-
PNEOPDPM_02685	0.0	pfp	2.7.1.11, 2.7.1.90	-	H	ko:K00895,ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
PNEOPDPM_02686	8.45e-160	-	-	-	S	ko:K09702	-	ko00000	Protein of unknown function (DUF1349)
PNEOPDPM_02687	1.15e-43	-	-	-	S	-	-	-	Zinc finger, swim domain protein
PNEOPDPM_02688	3.06e-150	-	-	-	S	-	-	-	SWIM zinc finger
PNEOPDPM_02689	1.12e-143	-	-	-	L	-	-	-	DNA-binding protein
PNEOPDPM_02690	5.24e-49	-	-	-	S	-	-	-	Protein of unknown function (DUF3791)
PNEOPDPM_02691	1.81e-114	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
PNEOPDPM_02692	3.3e-43	-	-	-	-	-	-	-	-
PNEOPDPM_02693	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PNEOPDPM_02694	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PNEOPDPM_02695	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PNEOPDPM_02696	9.84e-286	-	-	-	G	-	-	-	Peptidase of plants and bacteria
PNEOPDPM_02697	0.0	-	-	-	T	-	-	-	Response regulator receiver domain protein
PNEOPDPM_02698	2.45e-268	-	-	-	CO	-	-	-	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PNEOPDPM_02699	6.01e-99	-	-	-	O	ko:K07397	-	ko00000	OsmC-like protein
PNEOPDPM_02700	1.69e-166	-	-	-	C	-	-	-	COG0822 NifU homolog involved in Fe-S cluster formation
PNEOPDPM_02701	2.25e-37	-	-	-	-	-	-	-	-
PNEOPDPM_02702	1.39e-118	-	-	-	S	-	-	-	Protein of unknown function (DUF4199)
PNEOPDPM_02703	2.31e-232	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PNEOPDPM_02704	8.54e-123	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PNEOPDPM_02705	0.0	-	4.2.1.82, 4.2.1.9	-	EG	ko:K01687,ko:K22396	ko00040,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00040,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the IlvD Edd family
PNEOPDPM_02706	4.99e-251	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PNEOPDPM_02708	1.99e-316	-	-	-	-	-	-	-	-
PNEOPDPM_02709	1.2e-49	-	-	-	S	-	-	-	RNA recognition motif
PNEOPDPM_02710	0.0	ino1	5.5.1.4	-	I	ko:K01858	ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130	ko00000,ko00001,ko01000	Myo-inositol-1-phosphate synthase
PNEOPDPM_02711	3.54e-165	-	-	-	JM	-	-	-	Nucleotidyl transferase
PNEOPDPM_02712	3.35e-214	-	-	-	HJ	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02713	9.71e-224	-	-	-	I	-	-	-	CDP-alcohol phosphatidyltransferase
PNEOPDPM_02714	2.71e-177	-	3.1.3.102, 3.1.3.104	-	S	ko:K07025,ko:K20862	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Haloacid dehalogenase-like hydrolase
PNEOPDPM_02715	4.58e-212	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PNEOPDPM_02716	1.03e-170	-	-	-	S	-	-	-	COG NOG27188 non supervised orthologous group
PNEOPDPM_02717	1.89e-237	tagO	-	-	M	-	-	-	UDP-N-acetylmuramyl pentapeptide phosphotransferase
PNEOPDPM_02718	1.95e-294	-	1.1.1.336	-	M	ko:K02472	ko00520,ko05111,map00520,map05111	ko00000,ko00001,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PNEOPDPM_02720	0.0	-	-	-	E	-	-	-	asparagine synthase
PNEOPDPM_02722	2.35e-286	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PNEOPDPM_02723	5.78e-268	-	-	-	M	-	-	-	Mannosyltransferase
PNEOPDPM_02724	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_02725	2.86e-289	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PNEOPDPM_02726	1.36e-264	-	-	-	S	ko:K19419	-	ko00000,ko02000	EpsG family
PNEOPDPM_02727	1.38e-274	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_02728	5.9e-182	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PNEOPDPM_02729	1.54e-311	-	-	-	H	-	-	-	Flavin containing amine oxidoreductase
PNEOPDPM_02730	2.4e-279	-	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	UDP-N-acetylglucosamine 2-epimerase
PNEOPDPM_02732	0.0	-	-	-	S	-	-	-	Endo-alpha-N-acetylgalactosaminidase
PNEOPDPM_02733	1.13e-102	-	-	-	S	-	-	-	Domain of unknown function (DUF5053)
PNEOPDPM_02734	0.0	-	-	-	P	-	-	-	Outer membrane protein beta-barrel family
PNEOPDPM_02735	0.0	-	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	histidine kinase DNA gyrase B
PNEOPDPM_02736	2.49e-157	-	-	-	KT	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PNEOPDPM_02737	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PNEOPDPM_02738	5.39e-272	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PNEOPDPM_02739	4.56e-287	-	-	-	S	-	-	-	6-bladed beta-propeller
PNEOPDPM_02740	0.0	-	6.2.1.30	-	H	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	ko00000,ko00001,ko01000	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PNEOPDPM_02741	3.4e-93	-	-	-	S	-	-	-	ACT domain protein
PNEOPDPM_02742	6.84e-186	yfiO	-	-	S	ko:K05807	-	ko00000,ko02000	outer membrane assembly lipoprotein YfiO
PNEOPDPM_02743	6.09e-70	rpoZ	-	-	S	-	-	-	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PNEOPDPM_02744	1.02e-93	-	-	-	S	-	-	-	Domain of unknown function (DUF4293)
PNEOPDPM_02745	0.0	lacZ	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Beta galactosidase small chain
PNEOPDPM_02746	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Fn3 associated
PNEOPDPM_02747	2.11e-21	-	-	-	T	-	-	-	helix_turn_helix, arabinose operon control protein
PNEOPDPM_02748	1.11e-153	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
PNEOPDPM_02749	0.0	lysM	-	-	M	-	-	-	Lysin motif
PNEOPDPM_02750	0.0	-	-	-	S	-	-	-	C-terminal domain of CHU protein family
PNEOPDPM_02751	2.73e-239	mltD_2	-	-	M	-	-	-	Transglycosylase SLT domain
PNEOPDPM_02752	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PNEOPDPM_02753	1.19e-45	-	-	-	-	-	-	-	-
PNEOPDPM_02754	0.0	bfmBAB	1.2.4.4	-	C	ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	dehydrogenase E1 component
PNEOPDPM_02755	3.99e-129	isiB	-	-	C	ko:K03839	-	ko00000	Low-potential electron donor to a number of redox enzymes
PNEOPDPM_02756	6.04e-103	-	-	-	K	-	-	-	Transcriptional regulator
PNEOPDPM_02757	2.6e-312	oprM_1	-	-	MU	-	-	-	Efflux transporter, outer membrane factor
PNEOPDPM_02758	0.0	bepE_1	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PNEOPDPM_02759	3.57e-252	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_02760	1.49e-221	-	-	-	K	-	-	-	Transcriptional regulator, AraC family
PNEOPDPM_02761	2.86e-123	-	-	-	-	-	-	-	-
PNEOPDPM_02762	7.36e-220	-	-	-	K	-	-	-	Transcriptional regulator
PNEOPDPM_02763	1.03e-126	-	-	-	S	-	-	-	Cupin domain
PNEOPDPM_02764	1.05e-202	-	-	-	P	-	-	-	Dimerisation domain of Zinc Transporter
PNEOPDPM_02765	3.91e-74	wecA	2.7.8.33, 2.7.8.35, 5.1.3.14	-	M	ko:K01791,ko:K02851	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	phospho-N-acetylmuramoyl-pentapeptide-transferase activity
PNEOPDPM_02766	1.58e-157	-	-	-	M	-	-	-	sugar transferase
PNEOPDPM_02769	0.0	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_02770	5.04e-304	-	-	-	C	-	-	-	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
PNEOPDPM_02771	1.87e-290	-	-	-	S	-	-	-	Polysaccharide pyruvyl transferase
PNEOPDPM_02773	0.0	-	-	-	S	-	-	-	Hydrolase
PNEOPDPM_02774	2.83e-237	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PNEOPDPM_02775	2.92e-184	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PNEOPDPM_02776	4.55e-307	-	-	-	H	-	-	-	Flavin containing amine oxidoreductase
PNEOPDPM_02777	4.64e-105	-	-	-	C	-	-	-	radical SAM domain protein
PNEOPDPM_02778	1.86e-17	-	-	-	C	-	-	-	radical SAM domain protein
PNEOPDPM_02779	8.17e-214	-	-	-	-	-	-	-	-
PNEOPDPM_02780	4.08e-112	-	-	-	S	-	-	-	Protein of unknown function (DUF3408)
PNEOPDPM_02781	1.65e-93	-	-	-	D	-	-	-	Involved in chromosome partitioning
PNEOPDPM_02782	9.9e-12	-	-	-	-	-	-	-	-
PNEOPDPM_02784	4.94e-44	-	-	-	-	-	-	-	-
PNEOPDPM_02785	4.42e-35	-	-	-	-	-	-	-	-
PNEOPDPM_02786	2.07e-13	-	-	-	-	-	-	-	-
PNEOPDPM_02787	2.35e-286	-	-	-	U	-	-	-	Relaxase mobilization nuclease domain protein
PNEOPDPM_02788	8.23e-24	-	-	-	U	-	-	-	unidirectional conjugation
PNEOPDPM_02789	0.0	-	-	-	U	-	-	-	Type IV secretory system Conjugative DNA transfer
PNEOPDPM_02790	0.0	-	-	-	T	-	-	-	Tetratricopeptide repeat
PNEOPDPM_02791	2.42e-261	-	-	-	-	-	-	-	-
PNEOPDPM_02792	6.65e-71	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_02793	1.33e-110	-	-	-	L	-	-	-	Transposase DDE domain
PNEOPDPM_02794	1.65e-107	-	-	-	S	-	-	-	TIGRFAM integrative and conjugative element protein, VC0181 family
PNEOPDPM_02795	0.0	-	-	-	H	-	-	-	ThiF family
PNEOPDPM_02796	9.56e-244	-	-	-	-	-	-	-	-
PNEOPDPM_02797	3.5e-249	-	-	-	S	ko:K06900	-	ko00000	Patatin-like phospholipase
PNEOPDPM_02798	1.42e-306	-	-	-	S	-	-	-	Protein of unknown function (DUF3945)
PNEOPDPM_02799	2.09e-104	-	-	-	S	-	-	-	Domain of unknown function (DUF1896)
PNEOPDPM_02800	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
PNEOPDPM_02801	3.43e-194	-	-	-	E	-	-	-	Trypsin-like peptidase domain
PNEOPDPM_02802	1.99e-33	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PNEOPDPM_02803	3.54e-43	-	-	-	KT	-	-	-	PspC domain
PNEOPDPM_02804	0.0	-	-	-	H	-	-	-	lysine biosynthetic process via aminoadipic acid
PNEOPDPM_02805	9.03e-174	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
PNEOPDPM_02806	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
PNEOPDPM_02807	1.28e-179	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
PNEOPDPM_02808	4.84e-204	-	-	-	EG	-	-	-	membrane
PNEOPDPM_02809	1.2e-186	-	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	Barrel-sandwich domain of CusB or HlyD membrane-fusion
PNEOPDPM_02810	0.0	-	-	-	P	ko:K03446	-	ko00000,ko00002,ko02000	Major Facilitator Superfamily
PNEOPDPM_02811	0.0	thrA	1.1.1.3, 2.7.2.4	-	E	ko:K12524	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
PNEOPDPM_02812	1.96e-296	-	5.4.2.12	-	G	ko:K15635	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	2,3-bisphosphoglycerate-independent phosphoglycerate mutase
PNEOPDPM_02813	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase N terminus
PNEOPDPM_02814	6.24e-89	-	-	-	S	-	-	-	Protein of unknown function, DUF488
PNEOPDPM_02815	3.31e-89	-	-	-	-	-	-	-	-
PNEOPDPM_02816	0.0	-	-	-	L	-	-	-	ATPase domain of DNA mismatch repair MUTS family
PNEOPDPM_02817	2.67e-101	-	-	-	S	-	-	-	Family of unknown function (DUF695)
PNEOPDPM_02818	1.81e-225	-	-	-	S	ko:K03453	-	ko00000	Sodium bile acid symporter family
PNEOPDPM_02819	3.77e-272	gcvT	2.1.2.10	-	E	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine
PNEOPDPM_02820	2.81e-299	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PNEOPDPM_02821	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Glutamine phosphoribosylpyrophosphate amidotransferase
PNEOPDPM_02823	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PNEOPDPM_02824	0.0	-	-	-	G	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_02825	2.3e-184	-	-	-	-	-	-	-	-
PNEOPDPM_02826	0.0	-	-	-	S	-	-	-	Insulinase (Peptidase family M16)
PNEOPDPM_02827	0.0	-	-	-	U	-	-	-	WD40-like Beta Propeller Repeat
PNEOPDPM_02828	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_02829	0.0	modF	-	-	P	ko:K05776	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
PNEOPDPM_02830	1.92e-168	-	-	-	C	-	-	-	Domain of Unknown Function (DUF1080)
PNEOPDPM_02831	3.52e-177	argB	2.7.2.8	-	E	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
PNEOPDPM_02833	3.85e-198	-	-	-	O	-	-	-	BRO family, N-terminal domain
PNEOPDPM_02834	0.0	nhaD	-	-	P	-	-	-	Citrate transporter
PNEOPDPM_02835	8.62e-146	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
PNEOPDPM_02836	2.92e-144	-	-	-	S	-	-	-	COG NOG25304 non supervised orthologous group
PNEOPDPM_02837	1.39e-81	-	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
PNEOPDPM_02838	2.03e-88	-	-	-	-	-	-	-	-
PNEOPDPM_02839	3.78e-137	mug	-	-	L	-	-	-	DNA glycosylase
PNEOPDPM_02840	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Psort location Cytoplasmic, score
PNEOPDPM_02842	8.5e-207	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Metallopeptidase family M24
PNEOPDPM_02843	1.12e-112	-	-	-	-	-	-	-	-
PNEOPDPM_02844	6.95e-111	rlpA	-	-	M	ko:K03642	-	ko00000	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PNEOPDPM_02845	2.03e-291	czcC	-	-	MU	ko:K15725	-	ko00000,ko02000	Outer membrane efflux protein
PNEOPDPM_02846	1.4e-260	czcB	-	-	M	ko:K15727	-	ko00000,ko02000	Barrel-sandwich domain of CusB or HlyD membrane-fusion
PNEOPDPM_02847	0.0	czcA_1	-	-	P	ko:K15726	-	ko00000,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PNEOPDPM_02848	3.56e-161	cusR	-	-	T	ko:K07665	ko02020,map02020	ko00000,ko00001,ko00002,ko01504,ko02022	Transcriptional regulatory protein, C terminal
PNEOPDPM_02849	6.59e-275	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PNEOPDPM_02851	3.58e-55	mrcB	2.4.1.129, 3.4.16.4	GT51	M	ko:K05365	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PNEOPDPM_02852	5.51e-239	ldhA	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PNEOPDPM_02853	9.57e-209	-	-	-	S	-	-	-	Patatin-like phospholipase
PNEOPDPM_02854	0.0	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PNEOPDPM_02855	5.26e-172	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PNEOPDPM_02856	3.47e-141	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Thiamine monophosphate synthase
PNEOPDPM_02857	1.98e-195	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PNEOPDPM_02858	2.3e-129	-	-	-	S	-	-	-	AAA domain
PNEOPDPM_02859	0.0	-	-	-	M	-	-	-	CarboxypepD_reg-like domain
PNEOPDPM_02860	6.51e-312	-	-	-	M	-	-	-	Surface antigen
PNEOPDPM_02861	0.0	-	-	-	T	-	-	-	PAS fold
PNEOPDPM_02862	0.0	-	-	-	M	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
PNEOPDPM_02863	2.13e-277	-	-	-	S	-	-	-	ATPase domain predominantly from Archaea
PNEOPDPM_02865	2.14e-62	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	regulation of translation
PNEOPDPM_02866	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_02867	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
PNEOPDPM_02873	2.61e-237	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_02875	2.46e-204	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_02876	4.44e-223	-	-	-	-	-	-	-	-
PNEOPDPM_02877	7.52e-15	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PNEOPDPM_02878	4.66e-177	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PNEOPDPM_02879	9.73e-226	-	-	-	L	-	-	-	COG NOG11942 non supervised orthologous group
PNEOPDPM_02880	0.0	nhaA	-	-	P	ko:K03313	-	ko00000,ko02000	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PNEOPDPM_02881	9.43e-279	-	-	-	P	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PNEOPDPM_02882	9.49e-113	yigZ	-	-	S	-	-	-	YigZ family
PNEOPDPM_02883	4.67e-155	-	4.1.1.35	-	M	ko:K08678	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko00002,ko01000	GDP-mannose 4,6 dehydratase
PNEOPDPM_02884	3.44e-283	-	-	-	S	-	-	-	polysaccharide biosynthetic process
PNEOPDPM_02885	3.02e-277	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_02886	5.4e-252	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PNEOPDPM_02887	2.78e-254	-	-	-	S	-	-	-	O-Antigen ligase
PNEOPDPM_02888	1.57e-260	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_02889	1.47e-213	-	-	-	J	-	-	-	TIGRFAM methyltransferase FkbM family
PNEOPDPM_02890	0.0	capK	6.2.1.30	-	H	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	ko00000,ko00001,ko01000	COG1541 Coenzyme F390 synthetase
PNEOPDPM_02891	1.38e-277	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PNEOPDPM_02892	1.23e-133	-	2.3.1.209	-	S	ko:K21379	-	ko00000,ko01000	Bacterial transferase hexapeptide (six repeats)
PNEOPDPM_02893	9.06e-26	-	4.1.1.35, 5.1.3.7	-	GM	ko:K02473,ko:K08678	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko00002,ko01000	ADP-glyceromanno-heptose 6-epimerase activity
PNEOPDPM_02894	3.2e-306	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_02896	1.13e-117	-	-	-	-	-	-	-	-
PNEOPDPM_02901	1.35e-107	-	-	-	NU	ko:K02395	-	ko00000,ko02035	amidase activity
PNEOPDPM_02902	2.74e-101	-	-	-	L	-	-	-	regulation of translation
PNEOPDPM_02905	0.0	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	DnaB-like helicase N terminal domain
PNEOPDPM_02906	1.64e-303	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNEOPDPM_02908	0.0	-	-	-	S	-	-	-	Capsule assembly protein Wzi
PNEOPDPM_02909	2.96e-91	-	-	-	S	-	-	-	Lipocalin-like domain
PNEOPDPM_02910	0.0	-	-	-	S	-	-	-	Capsule assembly protein Wzi
PNEOPDPM_02912	0.0	-	-	-	S	-	-	-	Virulence-associated protein E
PNEOPDPM_02913	4.37e-47	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PNEOPDPM_02915	3.7e-106	-	-	-	L	-	-	-	regulation of translation
PNEOPDPM_02918	1.06e-87	-	-	-	M	-	-	-	Bacterial sugar transferase
PNEOPDPM_02919	1.14e-299	-	2.6.1.59	-	E	ko:K02805	-	ko00000,ko01000,ko01007	DegT/DnrJ/EryC1/StrS aminotransferase family
PNEOPDPM_02920	3.91e-289	-	-	-	F	-	-	-	RimK-like ATP-grasp domain
PNEOPDPM_02921	1.53e-267	-	-	-	F	-	-	-	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
PNEOPDPM_02922	2.86e-146	-	-	-	M	-	-	-	Bacterial sugar transferase
PNEOPDPM_02923	4.92e-288	-	-	-	M	-	-	-	Glycosyl transferase 4-like
PNEOPDPM_02924	5.91e-281	-	-	-	M	-	-	-	Glycosyltransferase Family 4
PNEOPDPM_02925	1.04e-215	-	-	-	S	-	-	-	Glycosyl transferase family 2
PNEOPDPM_02926	2.01e-268	-	-	-	M	-	-	-	O-antigen ligase like membrane protein
PNEOPDPM_02927	2.34e-284	-	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PNEOPDPM_02928	0.0	-	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PNEOPDPM_02929	0.0	wbpM	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
PNEOPDPM_02932	2.45e-103	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PNEOPDPM_02933	7.17e-258	tagO	-	-	M	-	-	-	UDP-N-acetylmuramyl pentapeptide phosphotransferase
PNEOPDPM_02934	8.06e-301	-	1.1.1.336	-	M	ko:K02472	ko00520,ko05111,map00520,map05111	ko00000,ko00001,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PNEOPDPM_02935	0.0	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
PNEOPDPM_02936	7.33e-311	-	-	-	C	-	-	-	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
PNEOPDPM_02937	2.06e-280	-	-	-	S	-	-	-	Polysaccharide pyruvyl transferase
PNEOPDPM_02938	3.86e-236	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
PNEOPDPM_02939	5.93e-261	-	-	-	S	-	-	-	EpsG family
PNEOPDPM_02940	1.16e-265	-	-	-	M	-	-	-	Glycosyl transferases group 1
PNEOPDPM_02941	3e-221	-	-	-	M	-	-	-	TupA-like ATPgrasp
PNEOPDPM_02942	3.04e-171	-	2.4.1.180	GT26	M	ko:K02852	-	ko00000,ko01000,ko01003	Belongs to the glycosyltransferase 26 family
PNEOPDPM_02943	2.75e-131	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PNEOPDPM_02944	0.0	rng	-	-	J	ko:K08301	-	ko00000,ko01000,ko03009,ko03019	ribonuclease G
PNEOPDPM_02945	8.94e-56	hupA	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Belongs to the bacterial histone-like protein family
PNEOPDPM_02946	2.32e-282	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific adenine glycosylase
PNEOPDPM_02947	9.32e-112	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
PNEOPDPM_02948	5.79e-305	gldE	-	-	S	-	-	-	gliding motility-associated protein GldE
PNEOPDPM_02949	9.63e-136	gldD	-	-	S	-	-	-	Gliding motility-associated lipoprotein GldD
PNEOPDPM_02950	8.42e-149	sfp	-	-	H	-	-	-	Belongs to the P-Pant transferase superfamily
PNEOPDPM_02951	0.0	-	-	-	T	-	-	-	helix_turn_helix, arabinose operon control protein
PNEOPDPM_02952	0.0	-	-	-	M	-	-	-	Right handed beta helix region
PNEOPDPM_02953	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PNEOPDPM_02954	7.78e-175	-	-	-	S	-	-	-	Uncharacterised ArCR, COG2043
PNEOPDPM_02956	1.4e-170	-	-	-	-	-	-	-	-
PNEOPDPM_02957	5.89e-136	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Methyladenine glycosylase
PNEOPDPM_02958	0.0	-	2.7.11.1	-	L	ko:K08282	-	ko00000,ko01000	SNF2 family N-terminal domain
PNEOPDPM_02959	3.81e-67	-	-	-	S	-	-	-	Nucleotidyltransferase domain
PNEOPDPM_02960	6.79e-91	-	-	-	S	-	-	-	HEPN domain
PNEOPDPM_02961	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	amidophosphoribosyltransferase
PNEOPDPM_02962	9.38e-281	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
PNEOPDPM_02963	0.0	carB	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase (glutamine-hydrolyzing)
PNEOPDPM_02964	2.49e-214	-	-	-	C	-	-	-	UPF0313 protein
PNEOPDPM_02965	0.0	-	-	-	CO	-	-	-	Domain of unknown function (DUF4369)
PNEOPDPM_02966	2.94e-80	-	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	Has endoribonuclease activity on mRNA
PNEOPDPM_02967	3.13e-172	trmH	2.1.1.185	-	J	ko:K03218,ko:K03437	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PNEOPDPM_02968	1.06e-96	-	-	-	-	-	-	-	-
PNEOPDPM_02969	3.45e-67	-	-	-	S	-	-	-	Protein of unknown function (DUF1622)
PNEOPDPM_02971	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PNEOPDPM_02972	3.77e-216	-	-	-	S	-	-	-	Domain of unknown function (DUF4835)
PNEOPDPM_02973	5.09e-283	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PNEOPDPM_02974	1.06e-280	yqhD	-	-	C	ko:K08325	ko00640,map00640	ko00000,ko00001,ko01000	alcohol dehydrogenase
PNEOPDPM_02975	2.5e-186	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III subunit epsilon
PNEOPDPM_02976	4.18e-262	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PNEOPDPM_02977	4.61e-220	-	-	-	S	-	-	-	Metalloenzyme superfamily
PNEOPDPM_02978	0.0	fbp	3.1.3.11	-	G	ko:K04041	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate
PNEOPDPM_02979	2.04e-231	-	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PNEOPDPM_02980	1.86e-245	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding protein
PNEOPDPM_02981	0.0	-	-	-	V	-	-	-	Multidrug transporter MatE
PNEOPDPM_02982	1.28e-115	-	-	-	S	-	-	-	Domain of unknown function (DUF4251)
PNEOPDPM_02983	2.41e-303	-	-	-	S	-	-	-	6-bladed beta-propeller
PNEOPDPM_02984	2.88e-86	-	-	-	O	-	-	-	Chaperonin 10 Kd subunit
PNEOPDPM_02985	1.97e-187	gltD	1.18.1.2, 1.19.1.1	-	C	ko:K00528	-	ko00000,ko01000	Ferredoxin-NADP reductase
PNEOPDPM_02986	0.0	gltA	1.3.1.1, 1.4.1.13, 1.4.1.14	-	E	ko:K00266,ko:K17722	ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation
PNEOPDPM_02987	9.13e-203	-	-	-	M	ko:K07071	-	ko00000	Domain of unknown function (DUF1731)
PNEOPDPM_02988	9.55e-242	-	-	-	CO	-	-	-	Domain of unknown function (DUF4369)
PNEOPDPM_02989	1.23e-177	-	-	-	C	-	-	-	4Fe-4S dicluster domain
PNEOPDPM_02991	7.89e-287	czcC_2	-	-	MU	ko:K15725	-	ko00000,ko02000	Outer membrane efflux protein
PNEOPDPM_02992	0.0	-	-	-	P	ko:K15726	-	ko00000,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PNEOPDPM_02993	1.44e-255	-	-	-	M	ko:K15727	-	ko00000,ko02000	Barrel-sandwich domain of CusB or HlyD membrane-fusion
PNEOPDPM_02995	0.0	-	-	-	S	-	-	-	Peptidase family M28
PNEOPDPM_02996	4.77e-38	-	-	-	-	-	-	-	-
PNEOPDPM_02997	1.02e-66	-	-	-	S	-	-	-	Domain of unknown function (DUF4491)
PNEOPDPM_02998	1.74e-188	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PNEOPDPM_02999	1.13e-40	-	-	-	-	-	-	-	-
PNEOPDPM_03000	5.69e-09	-	-	-	-	-	-	-	-
PNEOPDPM_03001	2.19e-71	-	-	-	S	-	-	-	Protein of unknown function (DUF2958)
PNEOPDPM_03003	4.22e-52	-	-	-	-	-	-	-	-
PNEOPDPM_03006	0.0	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	Psort location Cytoplasmic, score 8.96
PNEOPDPM_03007	1.3e-69	-	-	-	K	-	-	-	Toxin-antitoxin system, antitoxin component, Xre family
PNEOPDPM_03008	0.0	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	Psort location Cytoplasmic, score 8.96
PNEOPDPM_03009	2.94e-73	-	-	-	K	-	-	-	regulator of the anaerobic catobolism of benzoate BzdR K00891
PNEOPDPM_03010	7.39e-312	-	-	-	S	ko:K07133	-	ko00000	ATPase (AAA superfamily)
PNEOPDPM_03011	8.06e-222	uhpA	-	-	K	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PNEOPDPM_03013	0.0	-	3.2.1.45	GH30	G	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 30 family
PNEOPDPM_03014	3.39e-55	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PNEOPDPM_03015	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PNEOPDPM_03016	9.03e-12	-	-	-	-	-	-	-	-
PNEOPDPM_03017	1.55e-223	-	-	-	K	-	-	-	AraC-like ligand binding domain
PNEOPDPM_03019	4.48e-85	-	-	-	S	-	-	-	COG NOG23405 non supervised orthologous group
PNEOPDPM_03020	2.13e-106	-	-	-	S	-	-	-	COG NOG28735 non supervised orthologous group
PNEOPDPM_03021	1.04e-269	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PNEOPDPM_03022	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PNEOPDPM_03023	3.18e-208	-	-	-	S	-	-	-	Fimbrillin-like
PNEOPDPM_03024	4.79e-224	-	-	-	-	-	-	-	-
PNEOPDPM_03026	1.72e-146	-	-	-	P	ko:K20276	ko02024,map02024	ko00000,ko00001	alginic acid biosynthetic process
PNEOPDPM_03027	0.0	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PNEOPDPM_03028	0.0	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PNEOPDPM_03029	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
PNEOPDPM_03030	1.76e-109	asnC	-	-	K	ko:K03718	-	ko00000,ko03000	Transcriptional regulator
PNEOPDPM_03031	1.82e-131	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PNEOPDPM_03032	1.13e-88	-	-	-	U	ko:K03559	-	ko00000,ko02000	Biopolymer transporter ExbD
PNEOPDPM_03033	4.06e-134	-	-	-	U	-	-	-	Biopolymer transporter ExbD
PNEOPDPM_03034	8.97e-99	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PNEOPDPM_03035	1.48e-163	exbB	-	-	U	ko:K03561	-	ko00000,ko02000	MotA TolQ ExbB proton channel family protein
PNEOPDPM_03036	7.13e-123	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PNEOPDPM_03037	1.04e-99	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PNEOPDPM_03038	7.11e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PNEOPDPM_03039	9.02e-115	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PNEOPDPM_03040	2.57e-60	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PNEOPDPM_03041	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PNEOPDPM_03042	1.19e-73	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PNEOPDPM_03043	8.31e-159	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PNEOPDPM_03044	1.06e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L10
PNEOPDPM_03045	1.46e-70	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PNEOPDPM_03046	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PNEOPDPM_03047	2.74e-87	-	-	-	S	-	-	-	Lipocalin-like domain
PNEOPDPM_03048	0.0	-	-	-	S	-	-	-	Capsule assembly protein Wzi
PNEOPDPM_03049	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNEOPDPM_03050	0.0	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	DnaB-like helicase N terminal domain
PNEOPDPM_03052	0.0	-	-	-	S	-	-	-	Predicted AAA-ATPase
PNEOPDPM_03053	3.73e-285	pepQ	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	peptidase M24
PNEOPDPM_03054	0.0	-	3.1.3.1	-	P	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Belongs to the alkaline phosphatase family
PNEOPDPM_03055	1.08e-270	-	-	-	L	-	-	-	COG NOG08810 non supervised orthologous group
PNEOPDPM_03056	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF3987)
PNEOPDPM_03057	1e-80	-	-	-	K	-	-	-	Helix-turn-helix domain
PNEOPDPM_03058	0.0	-	-	-	L	-	-	-	DNA synthesis involved in DNA repair
PNEOPDPM_03059	1.88e-79	-	-	-	S	-	-	-	Mobilizable transposon, TnpC family protein
PNEOPDPM_03060	5.43e-255	-	-	-	M	-	-	-	Chain length determinant protein
PNEOPDPM_03061	0.0	kpsD	-	-	M	-	-	-	Polysaccharide biosynthesis/export protein
PNEOPDPM_03062	5.22e-89	-	-	-	S	-	-	-	Lipocalin-like domain
PNEOPDPM_03063	2.32e-303	-	-	-	S	-	-	-	Capsule assembly protein Wzi
PNEOPDPM_03064	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNEOPDPM_03065	0.0	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	DnaB-like helicase N terminal domain
PNEOPDPM_03069	5.14e-50	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PNEOPDPM_03070	3.49e-36	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PNEOPDPM_03071	1.27e-50	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PNEOPDPM_03072	1.31e-146	-	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
PNEOPDPM_03073	0.0	lpdA	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dihydrolipoyl dehydrogenase
PNEOPDPM_03074	1.29e-178	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PNEOPDPM_03075	5.68e-313	bfmBB	2.3.1.61	-	C	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
PNEOPDPM_03076	2.47e-136	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_03077	4.74e-151	-	-	-	S	-	-	-	Protein of unknown function (DUF1273)
PNEOPDPM_03078	1.08e-291	-	-	-	L	-	-	-	COG COG3385 FOG Transposase and inactivated derivatives
PNEOPDPM_03080	8.69e-30	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_03081	1.08e-102	-	-	-	S	-	-	-	Protein of unknown function (DUF3791)
PNEOPDPM_03082	1.18e-109	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
PNEOPDPM_03083	3.22e-85	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PNEOPDPM_03084	4.64e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PNEOPDPM_03085	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PNEOPDPM_03086	1.18e-62	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PNEOPDPM_03087	1.07e-143	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PNEOPDPM_03089	2.04e-199	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PNEOPDPM_03090	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_03092	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PNEOPDPM_03093	2.31e-63	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PNEOPDPM_03094	1.52e-144	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PNEOPDPM_03095	2.48e-136	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PNEOPDPM_03096	4.81e-56	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PNEOPDPM_03097	1.5e-208	-	-	-	L	-	-	-	COG COG3547 Transposase and inactivated derivatives
PNEOPDPM_03098	6.8e-30	-	-	-	L	-	-	-	Single-strand binding protein family
PNEOPDPM_03099	1.47e-32	-	-	-	L	-	-	-	Single-strand binding protein family
PNEOPDPM_03100	8.92e-73	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_03101	0.0	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	HipA N-terminal domain
PNEOPDPM_03103	5.56e-104	-	-	-	L	-	-	-	Radical SAM domain protein
PNEOPDPM_03104	1.99e-169	-	-	-	F	-	-	-	Psort location Cytoplasmic, score
PNEOPDPM_03105	1e-96	mgrA	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PNEOPDPM_03106	1.84e-78	-	-	-	G	-	-	-	Cupin domain
PNEOPDPM_03109	1.29e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF3801)
PNEOPDPM_03110	9.02e-91	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PNEOPDPM_03111	2.75e-72	-	-	-	-	-	-	-	-
PNEOPDPM_03112	3.29e-73	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_03113	3.79e-120	-	-	-	M	-	-	-	Belongs to the ompA family
PNEOPDPM_03114	9.87e-166	-	-	-	S	-	-	-	Domain of unknown function (DUF4136)
PNEOPDPM_03115	6.96e-151	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
PNEOPDPM_03116	5.68e-124	-	-	-	L	-	-	-	Helicase associated domain
PNEOPDPM_03117	1.83e-106	-	-	-	NU	ko:K02395	-	ko00000,ko02035	amidase activity
PNEOPDPM_03119	8.08e-147	pyrE	2.4.2.10, 4.1.1.23	-	F	ko:K00762,ko:K13421	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PNEOPDPM_03120	1.92e-92	-	-	-	E	-	-	-	oxidoreductase activity, acting on CH-OH group of donors
PNEOPDPM_03121	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
PNEOPDPM_03122	3.74e-108	-	-	-	P	-	-	-	nitrite reductase [NAD(P)H] activity
PNEOPDPM_03123	1.02e-184	-	-	-	C	ko:K18928	-	ko00000	Fe-S oxidoreductase
PNEOPDPM_03124	0.0	-	-	-	C	ko:K18929	-	ko00000	4Fe-4S ferredoxin
PNEOPDPM_03125	1.22e-139	lutC	-	-	S	ko:K00782	-	ko00000	LUD domain
PNEOPDPM_03126	1.08e-132	-	-	-	O	-	-	-	Redoxin
PNEOPDPM_03127	2.92e-102	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
PNEOPDPM_03128	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_03130	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
PNEOPDPM_03131	2.42e-182	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
PNEOPDPM_03132	2.73e-154	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PNEOPDPM_03133	3.5e-117	-	-	-	S	ko:K06889	-	ko00000	COG COG1073 Hydrolases of the alpha beta superfamily
PNEOPDPM_03134	5.8e-137	-	-	-	S	ko:K06889	-	ko00000	COG COG1073 Hydrolases of the alpha beta superfamily
PNEOPDPM_03135	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_03136	0.0	-	-	-	-	-	-	-	-
PNEOPDPM_03137	2.57e-118	fhlA	-	-	K	-	-	-	ATPase (AAA
PNEOPDPM_03138	6.21e-119	lptE	-	-	S	-	-	-	Lipopolysaccharide-assembly
PNEOPDPM_03139	3.52e-176	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PNEOPDPM_03140	1.29e-74	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PNEOPDPM_03141	2.33e-191	-	-	-	I	-	-	-	Protein of unknown function (DUF1460)
PNEOPDPM_03142	1.16e-282	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PNEOPDPM_03145	1.46e-120	-	-	-	K	-	-	-	KOW (Kyprides, Ouzounis, Woese) motif.
PNEOPDPM_03148	3.16e-39	-	-	-	P	ko:K07216	-	ko00000	Hemerythrin HHE cation binding domain
PNEOPDPM_03149	3.3e-99	-	-	-	S	-	-	-	Putative restriction endonuclease
PNEOPDPM_03151	0.0	-	-	-	L	-	-	-	Transposase DDE domain
PNEOPDPM_03152	0.0	-	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family