ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
NBIPMDDE_00001 1.69e-256 - - - M - - - Chain length determinant protein
NBIPMDDE_00002 0.0 fkp - - S - - - L-fucokinase
NBIPMDDE_00003 4.87e-141 - - - L - - - Resolvase, N terminal domain
NBIPMDDE_00004 4.54e-111 - - - S - - - Phage tail protein
NBIPMDDE_00005 2.71e-159 yggS - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NBIPMDDE_00006 6.91e-234 - 1.3.98.1 - F ko:K00226 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate
NBIPMDDE_00007 1.27e-83 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
NBIPMDDE_00008 0.0 cdr - - P - - - Belongs to the sulfur carrier protein TusA family
NBIPMDDE_00009 1.66e-307 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 seryl-tRNA synthetase
NBIPMDDE_00010 1.14e-128 mepS 3.4.17.13 - M ko:K13694 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
NBIPMDDE_00011 3.83e-56 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
NBIPMDDE_00012 4.75e-67 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
NBIPMDDE_00013 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase C-terminal domain
NBIPMDDE_00014 0.0 - - - P - - - CarboxypepD_reg-like domain
NBIPMDDE_00015 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_00016 2.64e-210 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
NBIPMDDE_00017 4.18e-33 - - - S - - - YtxH-like protein
NBIPMDDE_00018 5.07e-79 - - - - - - - -
NBIPMDDE_00019 6.96e-83 - - - - - - - -
NBIPMDDE_00020 2.65e-223 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
NBIPMDDE_00021 2.87e-216 miaA2 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NBIPMDDE_00022 1.83e-189 kdsA 2.5.1.55 - M ko:K01627 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the KdsA family
NBIPMDDE_00023 3.65e-158 - - - K ko:K21556 - ko00000,ko03000 Crp Fnr family
NBIPMDDE_00024 0.0 - - - - - - - -
NBIPMDDE_00025 3.42e-204 - - - I - - - Protein of unknown function (DUF1460)
NBIPMDDE_00026 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NBIPMDDE_00027 6.67e-43 - - - KT - - - PspC domain
NBIPMDDE_00028 2.55e-171 cutC - - P ko:K06201 - ko00000 Participates in the control of copper homeostasis
NBIPMDDE_00029 8.82e-213 - - - EG - - - membrane
NBIPMDDE_00030 1.64e-166 rluC 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Pseudouridine synthase
NBIPMDDE_00031 1.22e-168 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 reductase
NBIPMDDE_00032 6.36e-229 - 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
NBIPMDDE_00033 1.65e-134 qacR - - K - - - tetR family
NBIPMDDE_00035 1.47e-49 - - - S - - - Domain of unknown function (DUF4248)
NBIPMDDE_00037 5.68e-203 dnaJ2 - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 DnaJ molecular chaperone homology domain
NBIPMDDE_00038 8.52e-70 - - - S - - - MerR HTH family regulatory protein
NBIPMDDE_00040 6.16e-121 - 5.4.2.12 - G ko:K15634,ko:K15640 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
NBIPMDDE_00041 1.09e-130 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
NBIPMDDE_00042 3.28e-312 pbuX - - F ko:K16345 - ko00000,ko02000 Permease family
NBIPMDDE_00043 0.0 - - - S - - - Endonuclease/Exonuclease/phosphatase family
NBIPMDDE_00044 3.79e-250 ltaE 4.1.2.48 - E ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Threonine aldolase
NBIPMDDE_00045 2.63e-115 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
NBIPMDDE_00046 0.0 - - - O ko:K07403 - ko00000 serine protease
NBIPMDDE_00047 8.77e-151 - - - K - - - Putative DNA-binding domain
NBIPMDDE_00048 0.0 - - - P ko:K03455 - ko00000 COG0475 Kef-type K transport systems, membrane components
NBIPMDDE_00049 4.33e-189 kdsB 2.7.7.38 - M ko:K00979 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
NBIPMDDE_00050 0.0 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
NBIPMDDE_00051 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
NBIPMDDE_00054 2.71e-114 - - - S - - - Short repeat of unknown function (DUF308)
NBIPMDDE_00055 1.6e-216 - - - K - - - Helix-turn-helix domain
NBIPMDDE_00056 3.44e-139 - - - K - - - Bacterial regulatory proteins, tetR family
NBIPMDDE_00057 0.0 - - - MU - - - outer membrane efflux protein
NBIPMDDE_00058 3.87e-239 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_00059 0.0 czcA - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_00060 1.31e-67 - - - E - - - COG NOG19114 non supervised orthologous group
NBIPMDDE_00061 1.02e-164 - - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NBIPMDDE_00062 2.01e-180 - 1.3.1.22 - S ko:K12343 ko00140,map00140 ko00000,ko00001,ko01000 3-oxo-5-alpha-steroid 4-dehydrogenase
NBIPMDDE_00063 1.46e-302 namA - - C - - - NADH:flavin oxidoreductase / NADH oxidase family
NBIPMDDE_00064 1.35e-203 - - - IQ - - - Enoyl-(Acyl carrier protein) reductase
NBIPMDDE_00065 1.41e-129 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
NBIPMDDE_00066 2.68e-135 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
NBIPMDDE_00067 2.89e-100 hslR - - J ko:K04762 - ko00000,ko03110 S4 domain protein
NBIPMDDE_00068 4.14e-47 - - - - - - - -
NBIPMDDE_00069 1.3e-09 - - - - - - - -
NBIPMDDE_00070 1.3e-239 - - - CO - - - Domain of unknown function (DUF4369)
NBIPMDDE_00071 7.4e-179 - - - C - - - 4Fe-4S dicluster domain
NBIPMDDE_00072 0.0 - - - S - - - Peptidase family M28
NBIPMDDE_00073 0.0 - - - S - - - ABC transporter, ATP-binding protein
NBIPMDDE_00074 0.0 ltaS2 - - M - - - Sulfatase
NBIPMDDE_00075 3.47e-35 - - - S - - - MORN repeat variant
NBIPMDDE_00076 0.0 - - - N - - - COG NOG06100 non supervised orthologous group
NBIPMDDE_00077 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
NBIPMDDE_00078 1.46e-282 - - - K - - - transcriptional regulator (AraC family)
NBIPMDDE_00079 3.96e-178 - - - S - - - Domain of unknown function (DUF4469) with IG-like fold
NBIPMDDE_00080 2.33e-21 - - - S - - - COG COG4886 Leucine-rich repeat (LRR) protein
NBIPMDDE_00081 4.89e-313 - - - S - - - Protein of unknown function (DUF3843)
NBIPMDDE_00082 4.97e-249 - - - S ko:K22230 ko00562,ko01120,map00562,map01120 ko00000,ko00001,ko01000 Oxidoreductase NAD-binding domain protein
NBIPMDDE_00083 4.48e-170 comB 3.1.3.71 - H ko:K05979 ko00680,ko01120,map00680,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the ComB family
NBIPMDDE_00084 3.52e-120 - - - S - - - Domain of unknown function (DUF4251)
NBIPMDDE_00085 0.0 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 glucosamine-6-phosphate deaminase
NBIPMDDE_00086 1.34e-280 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
NBIPMDDE_00087 6.67e-282 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Amidohydrolase family
NBIPMDDE_00088 0.0 - - - S ko:K06158 - ko00000,ko03012 glycosyl transferase family 2
NBIPMDDE_00089 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
NBIPMDDE_00090 7.38e-285 - - - G - - - Belongs to the glycosyl hydrolase 43 family
NBIPMDDE_00091 0.0 - - - G - - - Domain of unknown function (DUF4982)
NBIPMDDE_00092 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_00093 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_00094 2.47e-112 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
NBIPMDDE_00095 9.66e-221 oxyR - - K ko:K04761 ko02026,map02026 ko00000,ko00001,ko03000 Transcriptional regulator
NBIPMDDE_00096 3.18e-201 pheA 4.2.1.51 - E ko:K04518 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydratase
NBIPMDDE_00097 1.01e-300 dapL 2.6.1.83 - E ko:K10206,ko:K14261 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
NBIPMDDE_00098 9.43e-259 pheB 5.4.99.5 - E ko:K04516 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cytochrome C4
NBIPMDDE_00099 9.79e-184 tyrA 1.3.1.12 - E ko:K00210 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydrogenase
NBIPMDDE_00100 4.14e-132 - - - I - - - Domain of unknown function (DUF4833)
NBIPMDDE_00101 0.0 topB 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 DNA topoisomerase III
NBIPMDDE_00102 1.32e-121 - - - I - - - NUDIX domain
NBIPMDDE_00103 6.27e-293 purH2 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 AICARFT/IMPCHase bienzyme
NBIPMDDE_00105 5e-224 - - - S - - - Domain of unknown function (DUF362)
NBIPMDDE_00106 0.0 - - - C - - - 4Fe-4S binding domain
NBIPMDDE_00107 3.28e-261 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
NBIPMDDE_00108 1.79e-245 lptG - - S ko:K11720 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Permease, YjgP YjgQ family
NBIPMDDE_00111 6.16e-237 - - - S - - - Domain of unknown function (DUF4925)
NBIPMDDE_00112 3.17e-314 - - - MU - - - Outer membrane efflux protein
NBIPMDDE_00113 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_00114 2.8e-255 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_00115 0.0 - - - G - - - Domain of unknown function (DUF5110)
NBIPMDDE_00116 0.0 menD 2.2.1.9 - H ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
NBIPMDDE_00117 1.03e-198 menB 4.1.3.36 - H ko:K01661 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NBIPMDDE_00118 1.2e-262 menC - - M - - - Mandelate racemase muconate lactonizing enzyme
NBIPMDDE_00119 4.39e-267 menE 6.2.1.26 - IQ ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 O-succinylbenzoic acid--CoA ligase
NBIPMDDE_00120 0.0 - - - E - - - Domain of Unknown Function with PDB structure (DUF3857)
NBIPMDDE_00121 0.0 - - - E - - - Domain of Unknown Function with PDB structure (DUF3858)
NBIPMDDE_00122 0.0 - 3.2.1.35 - G ko:K01197 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 beta-N-acetylglucosaminidase
NBIPMDDE_00123 1.65e-241 - - - S - - - Oxidoreductase NAD-binding domain protein
NBIPMDDE_00124 3.6e-305 - - - S - - - Domain of unknown function (DUF4934)
NBIPMDDE_00125 1.76e-257 - - - KT - - - BlaR1 peptidase M56
NBIPMDDE_00126 1.63e-82 - - - K - - - Penicillinase repressor
NBIPMDDE_00127 1.23e-192 - - - - - - - -
NBIPMDDE_00128 2.22e-60 - - - L - - - Bacterial DNA-binding protein
NBIPMDDE_00129 0.0 - - - E - - - Dipeptidyl peptidase IV (DPP IV) N-terminal region
NBIPMDDE_00130 6.95e-95 - - - C ko:K02124 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 ATPase, subunit K
NBIPMDDE_00131 0.0 - - - U ko:K02123 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 Belongs to the V-ATPase 116 kDa subunit family
NBIPMDDE_00132 1.61e-130 - - - C ko:K02120 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 ATP synthase subunit D
NBIPMDDE_00133 1.14e-315 ntpB - - C ko:K02118 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 the B subunit is part of the catalytic core of the ATP synthase complex
NBIPMDDE_00134 0.0 atpA 3.6.3.14, 3.6.3.15 - C ko:K02117 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
NBIPMDDE_00135 2.56e-216 - - - C - - - Protein of unknown function (DUF2764)
NBIPMDDE_00136 2.46e-115 - - - C ko:K02121 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 subunit E
NBIPMDDE_00138 2.55e-121 paiA - - K - - - Acetyltransferase (GNAT) domain
NBIPMDDE_00139 0.0 cobQ 6.3.5.10 - H ko:K02232 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
NBIPMDDE_00140 3.99e-129 - - - K - - - Transcription termination factor nusG
NBIPMDDE_00142 0.0 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_00143 0.0 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_00144 2.84e-265 - - - MU - - - Outer membrane efflux protein
NBIPMDDE_00145 0.0 czcA - - P ko:K07787 ko02020,map02020 ko00000,ko00001,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_00146 2.91e-260 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_00147 2.45e-81 - - - S - - - COG NOG32090 non supervised orthologous group
NBIPMDDE_00148 1.75e-181 thi4 - - H ko:K03146 ko00730,ko01100,map00730,map01100 ko00000,ko00001 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
NBIPMDDE_00149 1.64e-151 - - - F - - - Cytidylate kinase-like family
NBIPMDDE_00150 4.75e-308 - - - V - - - Multidrug transporter MatE
NBIPMDDE_00151 3.28e-110 msrC 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain
NBIPMDDE_00152 0.0 - - - S ko:K06894 - ko00000 Alpha-2-Macroglobulin
NBIPMDDE_00153 7.62e-216 - - - C - - - Aldo/keto reductase family
NBIPMDDE_00154 0.0 nhaA - - P ko:K03313 - ko00000,ko02000 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NBIPMDDE_00155 3.4e-194 - - - P - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_00156 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
NBIPMDDE_00157 1.87e-217 - - - G - - - Xylose isomerase-like TIM barrel
NBIPMDDE_00158 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_00159 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_00160 7.59e-136 - - - PT - - - FecR protein
NBIPMDDE_00162 1.42e-289 - - - S - - - Calcineurin-like phosphoesterase superfamily domain
NBIPMDDE_00163 0.0 - - - F - - - SusD family
NBIPMDDE_00164 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
NBIPMDDE_00165 2.52e-216 - - - PT - - - FecR protein
NBIPMDDE_00166 6.48e-142 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
NBIPMDDE_00168 2.67e-302 - - - - - - - -
NBIPMDDE_00169 2.95e-50 - - - S - - - PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
NBIPMDDE_00170 0.0 ino1 5.5.1.4 - I ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 ko00000,ko00001,ko01000 Myo-inositol-1-phosphate synthase
NBIPMDDE_00171 2.39e-103 pgpA 3.1.3.27 - I ko:K01095 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Phosphatidylglycerophosphatase A
NBIPMDDE_00172 1.59e-120 - - - S - - - GtrA-like protein
NBIPMDDE_00173 8.03e-159 pgsA1 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NBIPMDDE_00174 1.02e-228 - - - I - - - PAP2 superfamily
NBIPMDDE_00175 1.25e-196 - - - S - - - Calcineurin-like phosphoesterase
NBIPMDDE_00176 1.05e-154 - - - S - - - COG NOG27188 non supervised orthologous group
NBIPMDDE_00177 6.38e-150 - - - M - - - Outer membrane protein beta-barrel domain
NBIPMDDE_00178 5.69e-154 - - - S - - - Domain of unknown function (DUF4136)
NBIPMDDE_00179 1.15e-37 - - - K - - - acetyltransferase
NBIPMDDE_00180 9.88e-110 - - - K - - - Acetyltransferase (GNAT) family
NBIPMDDE_00181 2.14e-115 - - - M - - - Belongs to the ompA family
NBIPMDDE_00182 6.64e-73 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_00183 0.0 recQ2 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
NBIPMDDE_00184 0.0 clpB - - O ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
NBIPMDDE_00186 4.79e-220 - - - - - - - -
NBIPMDDE_00187 1.06e-186 - - - O - - - ADP-ribosylglycohydrolase
NBIPMDDE_00188 7.75e-259 - 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolases, choloylglycine hydrolase family
NBIPMDDE_00189 7.23e-193 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
NBIPMDDE_00190 1.91e-233 dus - - H - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NBIPMDDE_00191 8.42e-163 lipB 2.3.1.181 - H ko:K03801 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate
NBIPMDDE_00192 4.82e-187 mtgA 2.4.1.129 GT51 M ko:K03814 ko00550,map00550 ko00000,ko00001,ko01000,ko01003,ko01011 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NBIPMDDE_00193 0.0 - - - EGP ko:K08138 - ko00000,ko02000 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
NBIPMDDE_00194 0.0 xylA 5.3.1.5 - G ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko01000 Xylose isomerase
NBIPMDDE_00195 0.0 xylB_2 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 FGGY family of carbohydrate kinases, N-terminal domain
NBIPMDDE_00196 1.86e-171 - - - F - - - NUDIX domain
NBIPMDDE_00197 0.0 ktrB - - P ko:K03498 - ko00000,ko02000 COG0168 Trk-type K transport systems, membrane components
NBIPMDDE_00198 4.3e-159 ktrA - - P ko:K03499 - ko00000,ko02000 COG0569 K transport systems NAD-binding component
NBIPMDDE_00199 1.39e-295 corC_1 - - P ko:K03699 - ko00000,ko02042 Transporter associated domain
NBIPMDDE_00200 1.69e-56 - - - - - - - -
NBIPMDDE_00201 2.58e-102 - - - FG - - - HIT domain
NBIPMDDE_00202 3.55e-230 - - - G - - - Xylose isomerase-like TIM barrel
NBIPMDDE_00203 6.11e-158 - - - V ko:K02003 - ko00000,ko00002,ko02000 bacteriocin export ABC transporter, lactococcin 972 group
NBIPMDDE_00204 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
NBIPMDDE_00205 4.17e-116 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Ami_2
NBIPMDDE_00206 2.17e-06 - - - - - - - -
NBIPMDDE_00207 6.45e-111 - - - L - - - Bacterial DNA-binding protein
NBIPMDDE_00208 6.32e-42 - - - S - - - Domain of unknown function (DUF4248)
NBIPMDDE_00209 0.0 - - - S - - - Virulence-associated protein E
NBIPMDDE_00211 0.0 pbpC 2.4.1.129 GT51 M ko:K05367 ko00550,map00550 ko00000,ko00001,ko01000,ko01003,ko01011 Penicillin-Binding Protein C-terminus Family
NBIPMDDE_00212 4.54e-32 - 1.2.7.3 - C ko:K00176 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 br01601,ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
NBIPMDDE_00213 2.6e-258 vorB 1.2.7.11, 1.2.7.3 - C ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA
NBIPMDDE_00215 1.4e-186 vorA 1.2.7.11, 1.2.7.3 - C ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Oxidoreductase
NBIPMDDE_00216 2.12e-126 porG 1.2.7.3 - C ko:K00177 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoglutarate ferredoxin oxidoreductase subunit gamma
NBIPMDDE_00217 0.0 - - - H - - - Putative porin
NBIPMDDE_00218 2.4e-193 - - - M - - - Bacterial extracellular solute-binding proteins, family 3
NBIPMDDE_00219 0.0 - - - T - - - Histidine kinase-like ATPases
NBIPMDDE_00220 5.84e-291 - - - L - - - Belongs to the DEAD box helicase family
NBIPMDDE_00221 0.0 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NBIPMDDE_00222 0.0 tilS 6.3.4.19 - D ko:K04075 - ko00000,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
NBIPMDDE_00223 6.07e-133 - - - S ko:K07164 - ko00000 Zinc ribbon domain protein
NBIPMDDE_00224 3.74e-265 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NBIPMDDE_00225 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
NBIPMDDE_00226 0.0 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_00227 0.0 - - - T - - - Response regulator receiver domain protein
NBIPMDDE_00228 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_00229 0.0 - - - K ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_00231 4.07e-290 - - - S - - - Glycosyl Hydrolase Family 88
NBIPMDDE_00232 0.0 - - - S - - - Sulfatase-modifying factor enzyme 1
NBIPMDDE_00233 0.0 sbcC - - L ko:K03546 - ko00000,ko03400 Putative exonuclease SbcCD, C subunit
NBIPMDDE_00234 1.79e-306 sbcD - - L ko:K03547 - ko00000,ko03400 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
NBIPMDDE_00235 0.0 - - - P ko:K07085 - ko00000 TrkA C-terminal domain protein
NBIPMDDE_00236 8.17e-286 - - - J - - - (SAM)-dependent
NBIPMDDE_00238 1.01e-137 rbr3A - - C - - - Rubrerythrin
NBIPMDDE_00239 3.42e-259 fbaB 4.1.2.13 - G ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 DeoC/LacD family aldolase
NBIPMDDE_00240 0.0 pop - - EU - - - peptidase
NBIPMDDE_00241 2.28e-108 - - - D - - - cell division
NBIPMDDE_00242 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
NBIPMDDE_00243 0.0 - - - S - - - Tetratricopeptide repeats
NBIPMDDE_00244 2.39e-30 - - - - - - - -
NBIPMDDE_00245 9.94e-209 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family
NBIPMDDE_00246 0.0 - - - T - - - Periplasmic binding proteins and sugar binding domain of LacI family
NBIPMDDE_00247 9.82e-111 - - - G - - - Cupin 2, conserved barrel domain protein
NBIPMDDE_00248 0.0 prtQ - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Collagenase
NBIPMDDE_00249 3.05e-234 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NBIPMDDE_00250 0.0 - - - P - - - CarboxypepD_reg-like domain
NBIPMDDE_00251 1.53e-93 mce 5.1.99.1 - E ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 methylmalonyl-CoA epimerase
NBIPMDDE_00252 0.0 - - - I - - - Carboxyl transferase domain
NBIPMDDE_00253 8.45e-209 - - - C - - - Oxaloacetate decarboxylase, gamma chain
NBIPMDDE_00254 1.61e-92 mmdC - - I - - - Biofilm PGA synthesis protein PgaD
NBIPMDDE_00255 2.7e-277 oadB 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 Glutaconyl-CoA decarboxylase subunit beta
NBIPMDDE_00256 0.0 - - - S - - - COG NOG26639 non supervised orthologous group
NBIPMDDE_00257 1.44e-90 - - - L - - - COG NOG35286 non supervised orthologous group
NBIPMDDE_00258 6.3e-153 yeaZ - - O ko:K14742 - ko00000,ko03016 Universal bacterial protein YeaZ
NBIPMDDE_00259 1.29e-183 - - - S - - - Domain of unknown function (DUF1732)
NBIPMDDE_00260 3.92e-129 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
NBIPMDDE_00262 8.86e-151 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NBIPMDDE_00263 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
NBIPMDDE_00264 1.12e-242 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
NBIPMDDE_00265 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
NBIPMDDE_00266 2.4e-173 yfbT - - S - - - HAD hydrolase, family IA, variant 3
NBIPMDDE_00267 1.37e-218 - - - G - - - Xylose isomerase-like TIM barrel
NBIPMDDE_00268 1.33e-292 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
NBIPMDDE_00269 3.03e-264 - - - CP ko:K01992 - ko00000,ko00002,ko02000 membrane
NBIPMDDE_00270 2.19e-226 - - - M ko:K01993 - ko00000 Hemolysin secretion protein D
NBIPMDDE_00271 0.0 - - - MU - - - Outer membrane efflux protein
NBIPMDDE_00272 1.21e-143 - - - T - - - Cyclic nucleotide-monophosphate binding domain
NBIPMDDE_00273 2.36e-181 - - - S - - - Transposase
NBIPMDDE_00275 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
NBIPMDDE_00276 0.0 - 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 GMP synthase C terminal domain
NBIPMDDE_00277 1.04e-118 maa 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
NBIPMDDE_00278 8.74e-170 rsmE 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
NBIPMDDE_00279 3.92e-305 nupC - - F ko:K03317 - ko00000 Na+ dependent nucleoside transporter C-terminus
NBIPMDDE_00280 3.99e-141 - - - S ko:K08999 - ko00000 Bifunctional nuclease
NBIPMDDE_00281 4.65e-173 loiP - - O ko:K07387 - ko00000,ko01000,ko01002 Peptidase family M48
NBIPMDDE_00282 2.58e-224 - - - CO - - - Domain of unknown function (DUF5106)
NBIPMDDE_00283 0.0 - - - MU ko:K03640 - ko00000,ko02000 Belongs to the ompA family
NBIPMDDE_00284 1.47e-297 queA 2.4.99.17 - H ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
NBIPMDDE_00285 4.32e-122 - - - S - - - Acetyltransferase (GNAT) domain
NBIPMDDE_00286 4.65e-256 - - - L - - - Domain of unknown function (DUF2027)
NBIPMDDE_00287 5.04e-114 cyaA 4.6.1.1 - S ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 ko00000,ko00001,ko00002,ko01000 Adenylate cyclase
NBIPMDDE_00288 2.26e-249 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_00289 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
NBIPMDDE_00290 7.9e-149 - - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
NBIPMDDE_00291 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
NBIPMDDE_00292 3.47e-90 paaI - - Q ko:K02614 ko00360,map00360 ko00000,ko00001,ko01000 Thioesterase superfamily
NBIPMDDE_00293 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
NBIPMDDE_00294 0.0 glaB - - M - - - Parallel beta-helix repeats
NBIPMDDE_00295 0.0 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NBIPMDDE_00296 3.3e-104 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NBIPMDDE_00297 1.91e-85 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
NBIPMDDE_00298 1.39e-135 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_00299 0.0 rpoN - - K ko:K03092 ko02020,ko05111,map02020,map05111 ko00000,ko00001,ko03021 RNA polymerase sigma54 factor
NBIPMDDE_00300 0.0 - - - T - - - PAS domain
NBIPMDDE_00301 0.0 udk2 2.7.1.48 - FJ ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 ATPase (AAA
NBIPMDDE_00302 0.0 - - - P ko:K03324 - ko00000,ko02000 Na Pi-cotransporter II-like protein
NBIPMDDE_00303 0.0 uxaA 4.2.1.42, 4.2.1.7 - G ko:K01685,ko:K01708 ko00040,ko00053,ko01100,map00040,map00053,map01100 ko00000,ko00001,ko00002,ko01000 D-galactarate dehydratase / Altronate hydrolase, C terminus
NBIPMDDE_00304 0.0 uxaB 1.1.1.17, 1.1.1.58 - G ko:K00009,ko:K00041 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko00002,ko01000 Mannitol dehydrogenase Rossmann domain
NBIPMDDE_00306 1.2e-224 - - - G ko:K14274 ko00040,map00040 ko00000,ko00001,ko01000 SMP-30/Gluconolaconase/LRE-like region
NBIPMDDE_00307 0.0 rnr - - J ko:K12573,ko:K12585 ko03018,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
NBIPMDDE_00308 1.07e-43 - - - S - - - Immunity protein 17
NBIPMDDE_00309 6.4e-97 yjeE - - S ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
NBIPMDDE_00310 0.0 - - - T - - - PglZ domain
NBIPMDDE_00311 0.0 bga 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
NBIPMDDE_00312 1.28e-98 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
NBIPMDDE_00313 0.0 - - - NU - - - Tetratricopeptide repeat
NBIPMDDE_00314 4.52e-200 - - - S - - - Domain of unknown function (DUF4292)
NBIPMDDE_00315 5.88e-244 yibP - - D - - - peptidase
NBIPMDDE_00316 2.46e-307 - - - S - - - Polysaccharide biosynthesis protein
NBIPMDDE_00317 5.47e-260 argE 3.5.1.16 - E ko:K01438 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related
NBIPMDDE_00318 1.18e-221 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
NBIPMDDE_00319 0.0 - - - - - - - -
NBIPMDDE_00320 2.39e-121 - - - K ko:K03088 - ko00000,ko03021 ECF sigma factor
NBIPMDDE_00321 1.19e-230 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_00322 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_00323 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_00324 1.83e-303 - - - G - - - Glycosyl hydrolases family 16
NBIPMDDE_00325 0.0 - - - S - - - Domain of unknown function (DUF4832)
NBIPMDDE_00326 0.0 - 3.2.1.50 - G ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko04147 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain
NBIPMDDE_00327 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolases family 31
NBIPMDDE_00328 1.67e-123 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_00329 0.0 - - - G - - - Glycogen debranching enzyme
NBIPMDDE_00330 8.67e-228 - - - PT - - - COG3712 Fe2 -dicitrate sensor, membrane component
NBIPMDDE_00331 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_00332 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_00333 8.24e-248 - - - S - - - Domain of unknown function (DUF4831)
NBIPMDDE_00334 0.0 - - - E ko:K03305 - ko00000 amino acid peptide transporter
NBIPMDDE_00335 1.14e-96 - - - - - - - -
NBIPMDDE_00336 8.13e-238 bioB 2.8.1.6 - H ko:K01012 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
NBIPMDDE_00337 0.0 bioA 2.6.1.62 - H ko:K00833 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
NBIPMDDE_00338 8.32e-276 bioF 2.3.1.29, 2.3.1.47 - E ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 8-amino-7-oxononanoate synthase
NBIPMDDE_00339 4.36e-169 - 3.1.1.85 - S ko:K09789 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Protein of unknown function (DUF452)
NBIPMDDE_00340 4.01e-186 bioC 2.1.1.197 - H ko:K02169 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway
NBIPMDDE_00341 3.56e-161 bioD 6.3.3.3 - H ko:K01935 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
NBIPMDDE_00342 0.0 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
NBIPMDDE_00343 6.04e-271 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
NBIPMDDE_00344 1.32e-193 nlpD_1 - - M - - - Peptidase family M23
NBIPMDDE_00345 4.7e-120 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NBIPMDDE_00346 1.19e-312 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NBIPMDDE_00347 1.72e-142 - - - S - - - Domain of unknown function (DUF4290)
NBIPMDDE_00348 0.0 - - - G - - - Glycosyl hydrolases family 2, TIM barrel domain
NBIPMDDE_00349 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
NBIPMDDE_00350 0.0 arbA_2 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 Glycosyl hydrolases family 43
NBIPMDDE_00351 9.35e-157 - - - N - - - Protein of unknown function (DUF3823)
NBIPMDDE_00352 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_00353 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
NBIPMDDE_00354 1.31e-229 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_00355 0.0 - - - U - - - WD40-like Beta Propeller Repeat
NBIPMDDE_00356 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_00357 3.96e-126 - - - K ko:K03088 - ko00000,ko03021 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog
NBIPMDDE_00358 6.73e-133 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_00359 6.35e-229 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_00360 0.0 - - - H - - - TonB dependent receptor
NBIPMDDE_00361 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_00362 0.0 hypBA2 - - G - - - Glycogen debranching enzyme
NBIPMDDE_00363 0.0 - - - S ko:K09955 - ko00000 Beta-L-arabinofuranosidase, GH127
NBIPMDDE_00364 0.0 - - - S - - - Beta-L-arabinofuranosidase, GH127
NBIPMDDE_00365 0.0 - - - T - - - Y_Y_Y domain
NBIPMDDE_00366 0.0 - - - S - - - Beta-L-arabinofuranosidase, GH127
NBIPMDDE_00367 8.3e-46 - - - - - - - -
NBIPMDDE_00368 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
NBIPMDDE_00369 3.29e-192 - 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
NBIPMDDE_00370 1.31e-207 - - - S - - - Protein of unknown function (DUF3298)
NBIPMDDE_00371 1.19e-158 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
NBIPMDDE_00372 4.03e-156 - - - P - - - metallo-beta-lactamase
NBIPMDDE_00373 0.0 gcvP 1.4.4.2 - E ko:K00281,ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the GcvP family
NBIPMDDE_00374 3.34e-213 etfB - - C ko:K03521 - ko00000 Electron transfer flavoprotein
NBIPMDDE_00375 7.92e-247 etfA - - C ko:K03522 - ko00000,ko04147 Electron transfer flavoprotein
NBIPMDDE_00376 0.0 acd - - I - - - Acyl-CoA dehydrogenase C terminal
NBIPMDDE_00378 6.49e-304 dinF - - V ko:K03327 - ko00000,ko02000 Mate efflux family protein
NBIPMDDE_00379 4.64e-14 - - - - - - - -
NBIPMDDE_00380 5.34e-269 - - - M - - - Glycosyltransferase
NBIPMDDE_00381 1.46e-302 - - - M - - - Glycosyltransferase Family 4
NBIPMDDE_00382 2.43e-283 - - - M - - - -O-antigen
NBIPMDDE_00383 0.0 - - - S - - - Calcineurin-like phosphoesterase
NBIPMDDE_00384 1.48e-128 mntP - - P - - - Probably functions as a manganese efflux pump
NBIPMDDE_00385 1.7e-127 - - - C - - - Putative TM nitroreductase
NBIPMDDE_00386 1.06e-233 - - - M - - - Glycosyltransferase like family 2
NBIPMDDE_00387 8.38e-120 - - - S - - - Protein of unknown function (DUF4199)
NBIPMDDE_00390 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Glutamine phosphoribosylpyrophosphate amidotransferase
NBIPMDDE_00391 0.0 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
NBIPMDDE_00392 3.1e-271 gcvT 2.1.2.10 - E ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002,ko01000 The glycine cleavage system catalyzes the degradation of glycine
NBIPMDDE_00393 1.09e-221 - - - S ko:K03453 - ko00000 Sodium bile acid symporter family
NBIPMDDE_00394 3.22e-114 yncA 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
NBIPMDDE_00395 4.43e-100 - - - S - - - Family of unknown function (DUF695)
NBIPMDDE_00396 2.47e-275 - - - S - - - Domain of unknown function (DUF5109)
NBIPMDDE_00397 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase N terminus
NBIPMDDE_00398 1.14e-295 - 5.4.2.12 - G ko:K15635 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
NBIPMDDE_00399 0.0 thrA 1.1.1.3, 2.7.2.4 - E ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
NBIPMDDE_00400 0.0 - - - H - - - TonB dependent receptor
NBIPMDDE_00401 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_00402 1.58e-209 - - - EG - - - EamA-like transporter family
NBIPMDDE_00403 0.0 fbp 3.1.3.11 - G ko:K04041 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate
NBIPMDDE_00404 0.0 norM - - V ko:K03327 - ko00000,ko02000 Mate efflux family protein
NBIPMDDE_00405 1.49e-176 ppiA 5.2.1.8 - O ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NBIPMDDE_00406 4.15e-160 ppiA 5.2.1.8 - M ko:K01802,ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NBIPMDDE_00407 0.0 - - - S - - - Porin subfamily
NBIPMDDE_00408 2.9e-224 - - - JM - - - COG NOG09722 non supervised orthologous group
NBIPMDDE_00409 0.0 abf2 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 Alpha-L-arabinofuranosidase C-terminus
NBIPMDDE_00410 0.0 pepO 3.4.24.71 - O ko:K01415,ko:K07386 - ko00000,ko01000,ko01002,ko04147 Peptidase family M13
NBIPMDDE_00411 2.62e-183 - - - S - - - Domain of unknown function (DUF5020)
NBIPMDDE_00412 1.7e-283 yieG - - S ko:K06901 - ko00000,ko02000 Permease
NBIPMDDE_00413 1.44e-204 - - - P ko:K07301 - ko00000,ko02000 Sodium/calcium exchanger protein
NBIPMDDE_00417 9.71e-216 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
NBIPMDDE_00418 1.5e-206 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_00419 3.01e-120 thiJ 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 biosynthesis protein ThiJ
NBIPMDDE_00420 6.26e-143 - - - M - - - TonB family domain protein
NBIPMDDE_00421 1.71e-86 - - - U ko:K03559 - ko00000,ko02000 Biopolymer transporter ExbD
NBIPMDDE_00422 2.28e-158 exbB - - U ko:K03561 - ko00000,ko02000 Transporter, MotA TolQ ExbB proton channel family protein
NBIPMDDE_00423 1.02e-171 pdxJ 2.6.99.2 - H ko:K03474 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
NBIPMDDE_00424 3.84e-153 - - - S - - - CBS domain
NBIPMDDE_00425 1.03e-207 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NBIPMDDE_00426 1.85e-109 - - - T - - - PAS domain
NBIPMDDE_00430 5.94e-118 - - - S - - - PLAT/LH2 and C2-like Ca2+-binding lipoprotein
NBIPMDDE_00431 8.18e-86 - - - - - - - -
NBIPMDDE_00432 1.45e-115 - - - M - - - Outer membrane protein beta-barrel domain
NBIPMDDE_00433 2.23e-129 - - - T - - - FHA domain protein
NBIPMDDE_00434 2.73e-283 fsr - - G ko:K08223 - ko00000,ko02000 Major Facilitator Superfamily
NBIPMDDE_00435 0.0 - - - MU - - - Outer membrane efflux protein
NBIPMDDE_00436 2.28e-226 - - - M ko:K01993 - ko00000 Biotin-lipoyl like
NBIPMDDE_00437 1.19e-276 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
NBIPMDDE_00438 2.15e-282 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
NBIPMDDE_00441 0.0 - 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 histidine kinase DNA gyrase B
NBIPMDDE_00442 9.03e-162 - - - T - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NBIPMDDE_00443 3.21e-115 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NBIPMDDE_00444 2.77e-290 rmuC - - S ko:K09760 - ko00000 RmuC family
NBIPMDDE_00445 0.0 - - - S - - - AbgT putative transporter family
NBIPMDDE_00446 1.92e-262 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NBIPMDDE_00447 0.0 speA 4.1.1.19 - H ko:K01585 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the biosynthesis of agmatine from arginine
NBIPMDDE_00449 0.0 - - - M - - - Outer membrane protein, OMP85 family
NBIPMDDE_00450 9.06e-184 aviRb - - J ko:K03437 - ko00000,ko03016 RNA methyltransferase
NBIPMDDE_00452 1.02e-191 - - - S - - - Domain of unknown function (DUF4296)
NBIPMDDE_00453 2.25e-123 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NBIPMDDE_00454 1.45e-80 yocK - - T - - - Molecular chaperone DnaK
NBIPMDDE_00455 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NBIPMDDE_00456 1.35e-209 - - - S - - - Protein of unknown function (DUF3810)
NBIPMDDE_00457 0.0 metH 2.1.1.13 - E ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 B12 binding domain
NBIPMDDE_00458 8.42e-102 smpB - - O ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
NBIPMDDE_00459 4.42e-130 - - - S - - - Protein of unknown function (DUF1282)
NBIPMDDE_00461 3.66e-186 murQ 4.2.1.126 - G ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
NBIPMDDE_00462 1.86e-248 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
NBIPMDDE_00463 0.0 - - - Q - - - Acetyl xylan esterase (AXE1)
NBIPMDDE_00464 3.88e-203 - - - G - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_00465 0.0 - - - EGP ko:K08218 ko01501,map01501 ko00000,ko00001,ko00002,ko02000 BT1 family
NBIPMDDE_00466 4.46e-235 - - - F - - - Domain of unknown function (DUF4922)
NBIPMDDE_00467 0.0 - - - M - - - Glycosyl transferase family 2
NBIPMDDE_00468 0.0 - - - M - - - Peptidase family S41
NBIPMDDE_00471 0.0 mutB 5.4.99.2 - I ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Methylmalonyl-CoA mutase
NBIPMDDE_00472 0.0 mutA 5.4.99.2 - I ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Methylmalonyl-CoA mutase
NBIPMDDE_00474 1.81e-292 - 3.1.3.1 - S ko:K01113 ko00790,ko01100,ko02020,map00790,map01100,map02020 ko00000,ko00001,ko00002,ko01000 phosphodiesterase
NBIPMDDE_00475 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
NBIPMDDE_00476 0.0 - - - L - - - COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
NBIPMDDE_00477 6.34e-197 - - - O - - - prohibitin homologues
NBIPMDDE_00478 1.11e-37 - - - S - - - Arc-like DNA binding domain
NBIPMDDE_00479 2.82e-237 - - - S - - - Sporulation and cell division repeat protein
NBIPMDDE_00480 2.06e-260 yjmD_2 - - E ko:K18369 ko00640,map00640 ko00000,ko00001,ko01000 COG1063 Threonine dehydrogenase and related Zn-dependent
NBIPMDDE_00481 1.24e-192 spoU - - J ko:K03437 - ko00000,ko03016 SpoU rRNA Methylase family
NBIPMDDE_00482 1.36e-205 - - - IQ - - - Enoyl-(Acyl carrier protein) reductase
NBIPMDDE_00483 0.0 rluA 5.4.99.28, 5.4.99.29 - J ko:K06177 - ko00000,ko01000,ko03009,ko03016 RNA pseudouridylate synthase
NBIPMDDE_00484 0.0 - - - G - - - Glycosyl hydrolases family 43
NBIPMDDE_00486 1.9e-83 - - - S - - - Nitrous oxide-stimulated promoter
NBIPMDDE_00487 3.83e-230 - 2.3.1.82 - K ko:K18815 - br01600,ko00000,ko01000,ko01504 GNAT family acetyltransferase
NBIPMDDE_00488 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
NBIPMDDE_00489 5.66e-159 - - - T - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NBIPMDDE_00490 4.87e-46 - - - S - - - TSCPD domain
NBIPMDDE_00491 1.03e-50 - - - S - - - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
NBIPMDDE_00492 0.0 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
NBIPMDDE_00493 0.0 - - - G - - - Major Facilitator Superfamily
NBIPMDDE_00494 0.0 - - - N - - - domain, Protein
NBIPMDDE_00495 7.08e-46 - - - S - - - Domain of unknown function (DUF4469) with IG-like fold
NBIPMDDE_00496 3.56e-192 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NBIPMDDE_00497 1.27e-141 - - - Q - - - Mycolic acid cyclopropane synthetase
NBIPMDDE_00498 0.0 - - - EU - - - Peptidase, S9A B C family, catalytic domain protein
NBIPMDDE_00499 2.82e-152 cat 2.3.1.28 - V ko:K19271 - br01600,ko00000,ko01000,ko01504 Chloramphenicol acetyltransferase
NBIPMDDE_00500 8.55e-240 mdh 1.1.1.37 - C ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the LDH MDH superfamily
NBIPMDDE_00501 0.0 - - - C - - - UPF0313 protein
NBIPMDDE_00502 3.57e-81 - 3.5.99.10 - J ko:K09022 - ko00000,ko01000 Has endoribonuclease activity on mRNA
NBIPMDDE_00503 1.47e-166 trmH 2.1.1.185 - J ko:K03218,ko:K03437 - ko00000,ko01000,ko03009,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NBIPMDDE_00504 6.52e-98 - - - - - - - -
NBIPMDDE_00506 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
NBIPMDDE_00507 1.31e-214 - - - S - - - Domain of unknown function (DUF4835)
NBIPMDDE_00508 4.02e-264 coaBC 4.1.1.36, 6.3.2.5 - H ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NBIPMDDE_00509 4.32e-280 yqhD - - C ko:K08325 ko00640,map00640 ko00000,ko00001,ko01000 alcohol dehydrogenase
NBIPMDDE_00510 4e-187 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III subunit epsilon
NBIPMDDE_00511 4.18e-262 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
NBIPMDDE_00512 1.58e-27 - - - S - - - Domain of unknown function (DUF4295)
NBIPMDDE_00513 4.97e-36 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
NBIPMDDE_00514 1.27e-50 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
NBIPMDDE_00515 5.93e-299 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NBIPMDDE_00516 3.61e-144 - - - S ko:K07078 - ko00000 Nitroreductase family
NBIPMDDE_00517 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Dihydrolipoyl dehydrogenase
NBIPMDDE_00518 3.69e-178 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Lipoate-protein ligase
NBIPMDDE_00519 1.75e-310 bfmBB 2.3.1.61 - C ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
NBIPMDDE_00520 0.0 bfmBAB 1.2.4.4 - C ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 br01601,ko00000,ko00001,ko00002,ko01000 Dehydrogenase E1 component
NBIPMDDE_00521 6.23e-118 isiB - - C ko:K03839 - ko00000 Low-potential electron donor to a number of redox enzymes
NBIPMDDE_00522 6.13e-302 - - - MU - - - Outer membrane efflux protein
NBIPMDDE_00523 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_00524 9.63e-230 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_00525 1.26e-218 nucA_1 - - F ko:K01173 ko04210,map04210 ko00000,ko00001,ko03029 DNA/RNA non-specific endonuclease
NBIPMDDE_00526 5.28e-159 hly-III - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
NBIPMDDE_00527 1.98e-40 - - - P - - - mercury ion transmembrane transporter activity
NBIPMDDE_00528 0.0 copA 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 Copper-exporting ATPase
NBIPMDDE_00529 2.63e-108 - - - G - - - YhcH YjgK YiaL family protein
NBIPMDDE_00532 1.6e-269 uspA - - T - - - Belongs to the universal stress protein A family
NBIPMDDE_00533 1.42e-68 - - - S - - - DNA-binding protein
NBIPMDDE_00534 2.59e-161 - 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
NBIPMDDE_00535 2.71e-181 batE - - T - - - Tetratricopeptide repeat
NBIPMDDE_00536 0.0 batD - - S - - - Oxygen tolerance
NBIPMDDE_00537 1.46e-114 batC - - S - - - Tetratricopeptide repeat
NBIPMDDE_00538 4.32e-235 batB - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain
NBIPMDDE_00539 2.36e-222 batA - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain
NBIPMDDE_00540 9.42e-234 - - - O - - - Psort location CytoplasmicMembrane, score
NBIPMDDE_00541 1.23e-115 - - - - - - - -
NBIPMDDE_00542 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
NBIPMDDE_00543 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Glycosyl hydrolases family 35
NBIPMDDE_00544 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
NBIPMDDE_00545 2.66e-97 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G ko:K01190,ko:K01197,ko:K01206,ko:K17624 ko00052,ko00511,ko00531,ko00600,ko01100,map00052,map00511,map00531,map00600,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042,ko04147 beta-galactosidase activity
NBIPMDDE_00546 0.0 - - - P - - - Domain of unknown function (DUF4976)
NBIPMDDE_00548 0.0 - - - P - - - Psort location OuterMembrane, score
NBIPMDDE_00550 3.48e-98 - - - S - - - Tetratricopeptide repeat
NBIPMDDE_00553 0.0 dpp7 - - E - - - peptidase
NBIPMDDE_00554 1.39e-311 - - - S - - - membrane
NBIPMDDE_00555 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
NBIPMDDE_00556 0.0 cap - - S - - - Polysaccharide biosynthesis protein
NBIPMDDE_00557 1.48e-241 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
NBIPMDDE_00558 2e-142 - - - - - - - -
NBIPMDDE_00559 1.86e-268 - - - M - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_00562 0.0 - - - S - - - Tetratricopeptide repeat
NBIPMDDE_00565 3.6e-285 nagC 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
NBIPMDDE_00566 1.28e-228 nanA 4.1.3.3, 4.2.1.41, 4.3.3.7 - EM ko:K01639,ko:K01707,ko:K01714 ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the DapA family
NBIPMDDE_00567 0.0 nanE 5.1.3.8 - G ko:K01787 ko00520,map00520 ko00000,ko00001,ko01000 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
NBIPMDDE_00568 3.32e-303 - - - G ko:K08191 - ko00000,ko02000 Major Facilitator Superfamily
NBIPMDDE_00569 0.0 nanH 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 N-terminal domain of BNR-repeat neuraminidase
NBIPMDDE_00570 0.0 - - - G - - - Glycosyl hydrolase family 20, catalytic domain protein
NBIPMDDE_00571 0.0 estS 3.1.1.53 - E ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
NBIPMDDE_00572 3.75e-141 yvdD 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
NBIPMDDE_00573 6.95e-188 - - - L - - - Protein of unknown function (DUF2400)
NBIPMDDE_00574 4.67e-171 - - - L - - - DNA alkylation repair
NBIPMDDE_00575 1.23e-229 - 1.1.1.26 - CH ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NBIPMDDE_00576 1.11e-199 - - - I - - - Carboxylesterase family
NBIPMDDE_00577 2.85e-285 spmA - - S ko:K06373 - ko00000 membrane
NBIPMDDE_00578 2.98e-104 ybeY - - S - - - Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NBIPMDDE_00579 2.34e-286 - - - S - - - 6-bladed beta-propeller
NBIPMDDE_00580 0.0 - - - T - - - Histidine kinase
NBIPMDDE_00581 5.84e-173 - - - T ko:K02477 - ko00000,ko02022 LytTr DNA-binding domain
NBIPMDDE_00582 2.5e-99 - - - - - - - -
NBIPMDDE_00583 1.51e-159 - - - - - - - -
NBIPMDDE_00584 1.02e-96 - - - S - - - Bacterial PH domain
NBIPMDDE_00585 7.31e-77 - - - - - - - -
NBIPMDDE_00587 5.94e-22 - - - - - - - -
NBIPMDDE_00588 1.01e-108 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_00589 0.0 - - - S - - - Psort location OuterMembrane, score
NBIPMDDE_00590 1.97e-316 - - - S - - - Imelysin
NBIPMDDE_00592 0.0 - - - C - - - Di-haem oxidoreductase, putative peroxidase
NBIPMDDE_00593 1.14e-297 - - - P - - - Phosphate-selective porin O and P
NBIPMDDE_00594 2.4e-169 - - - - - - - -
NBIPMDDE_00595 2.63e-286 - - - J - - - translation initiation inhibitor, yjgF family
NBIPMDDE_00596 1.69e-168 - - - D ko:K07322 - ko00000 Di-iron-containing protein involved in the repair of iron-sulfur clusters
NBIPMDDE_00597 1.11e-139 - - - K - - - Transcriptional regulator, LuxR family
NBIPMDDE_00598 2.83e-284 - - - J - - - translation initiation inhibitor, yjgF family
NBIPMDDE_00599 0.0 - - - - - - - -
NBIPMDDE_00601 9.11e-170 - - - D ko:K07322 - ko00000 Di-iron-containing protein involved in the repair of iron-sulfur clusters
NBIPMDDE_00602 2.52e-136 - - - K - - - Transcriptional regulator, LuxR family
NBIPMDDE_00603 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
NBIPMDDE_00604 6.21e-160 - - - T - - - Carbohydrate-binding family 9
NBIPMDDE_00605 1.29e-151 - - - E - - - Translocator protein, LysE family
NBIPMDDE_00606 0.0 - - - P - - - Domain of unknown function
NBIPMDDE_00609 9.02e-84 - - - P - - - arylsulfatase activity
NBIPMDDE_00610 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
NBIPMDDE_00611 2.34e-140 - - - M - - - Outer membrane protein beta-barrel domain
NBIPMDDE_00612 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
NBIPMDDE_00613 0.0 - - - P - - - phosphate-selective porin O and P
NBIPMDDE_00614 1.01e-188 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
NBIPMDDE_00616 5.26e-259 - 1.3.1.9 - S ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 2-nitropropane dioxygenase
NBIPMDDE_00617 1.4e-90 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
NBIPMDDE_00618 6.55e-126 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
NBIPMDDE_00619 1.89e-75 - - - - - - - -
NBIPMDDE_00620 0.0 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
NBIPMDDE_00621 1.45e-55 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_00622 3.32e-85 - - - T - - - cheY-homologous receiver domain
NBIPMDDE_00623 2.97e-59 - - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 regulation of translation
NBIPMDDE_00625 2.28e-249 aroB 4.2.3.4 - E ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NBIPMDDE_00626 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NBIPMDDE_00627 1.25e-237 - - - M - - - Peptidase, M23
NBIPMDDE_00628 2.91e-74 ycgE - - K - - - Transcriptional regulator
NBIPMDDE_00629 1.55e-91 - - - L - - - Domain of unknown function (DUF3127)
NBIPMDDE_00630 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NBIPMDDE_00631 1.07e-191 - - - E - - - GDSL-like Lipase/Acylhydrolase
NBIPMDDE_00632 1.73e-216 - - - CH - - - D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NBIPMDDE_00633 2.56e-176 nadX 1.4.1.21 - S ko:K06989 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Domain of unknown function DUF108
NBIPMDDE_00635 0.000542 - - - P - - - Carboxypeptidase regulatory-like domain
NBIPMDDE_00636 8.71e-196 xapA 2.4.2.1 - F ko:K03783 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
NBIPMDDE_00637 1.6e-307 mtaD 3.5.4.28, 3.5.4.31 - F ko:K12960 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine
NBIPMDDE_00638 6.31e-309 dbpA 3.6.4.13 - L ko:K05591 - ko00000,ko01000,ko03009 DbpA RNA binding domain
NBIPMDDE_00639 0.0 dapE - - E - - - peptidase
NBIPMDDE_00640 3.51e-74 higA - - K ko:K21498 - ko00000,ko02048 COG3093 Plasmid maintenance system antidote protein
NBIPMDDE_00641 6.22e-72 - - - S ko:K07334 - ko00000,ko02048 RelE-like toxin of type II toxin-antitoxin system HigB
NBIPMDDE_00642 2.67e-131 - - - S - - - ATP cob(I)alamin adenosyltransferase
NBIPMDDE_00643 0.0 cbiA 6.3.5.11, 6.3.5.9 - H ko:K02224 ko00860,ko01100,ko01120,map00860,map01100,map01120 ko00000,ko00001,ko01000 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
NBIPMDDE_00644 6.33e-189 panB 2.1.2.11 - H ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
NBIPMDDE_00645 0.0 - - - P ko:K02014 - ko00000,ko02000 TonB dependent receptor
NBIPMDDE_00646 7.28e-90 - - - K ko:K07722 - ko00000,ko03000 Transcriptional regulator
NBIPMDDE_00648 2.74e-214 - - - EG - - - EamA-like transporter family
NBIPMDDE_00649 7.5e-53 - - - M - - - Protein of unknown function (DUF3078)
NBIPMDDE_00650 1.67e-248 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NBIPMDDE_00651 8.7e-83 crcB - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NBIPMDDE_00652 5.96e-159 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NBIPMDDE_00654 4.87e-106 cinA 3.5.1.42 - S ko:K03742,ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
NBIPMDDE_00655 1.78e-240 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NBIPMDDE_00656 0.0 - - - S - - - TamB, inner membrane protein subunit of TAM complex
NBIPMDDE_00657 0.0 - - - P ko:K07085 - ko00000 TrkA C-terminal domain protein
NBIPMDDE_00658 3.74e-205 - 5.2.1.8 - M ko:K03768 - ko00000,ko01000,ko03110 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
NBIPMDDE_00660 4.77e-100 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
NBIPMDDE_00661 2.1e-310 - - - P - - - Outer membrane protein beta-barrel family
NBIPMDDE_00662 2.82e-139 - - - P - - - Outer membrane protein beta-barrel family
NBIPMDDE_00663 7.75e-205 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_00664 4.92e-188 yaaA - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
NBIPMDDE_00665 1.6e-105 - - - S - - - 6-bladed beta-propeller
NBIPMDDE_00666 4.55e-176 - - - - - - - -
NBIPMDDE_00667 3e-167 - - - K - - - transcriptional regulatory protein
NBIPMDDE_00668 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NBIPMDDE_00671 8.38e-162 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
NBIPMDDE_00673 0.0 xyl3A_3 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 3
NBIPMDDE_00674 3.74e-242 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
NBIPMDDE_00675 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 1,4-alpha-glucan branching enzyme
NBIPMDDE_00676 0.0 nhaS3 - - P - - - Transporter, CPA2 family
NBIPMDDE_00677 0.0 - - - S - - - Protein of unknown function (DUF2851)
NBIPMDDE_00678 1.4e-170 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the DapB family
NBIPMDDE_00679 0.0 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
NBIPMDDE_00680 6.04e-218 lepB_1 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
NBIPMDDE_00681 1.2e-157 - - - C - - - WbqC-like protein
NBIPMDDE_00682 0.0 cvrA - - P ko:K11105 - ko00000,ko02000 Potassium
NBIPMDDE_00683 0.0 - - - E - - - Transglutaminase-like superfamily
NBIPMDDE_00684 4.91e-244 gldN - - S - - - Gliding motility-associated protein GldN
NBIPMDDE_00685 0.0 gldM - - S - - - Gliding motility-associated protein GldM
NBIPMDDE_00686 2.05e-192 gldL - - S - - - Gliding motility-associated protein, GldL
NBIPMDDE_00687 0.0 gldK - - M - - - gliding motility-associated lipoprotein GldK
NBIPMDDE_00688 1.23e-227 - - - P - - - Type IX secretion system membrane protein PorP/SprF
NBIPMDDE_00689 1.61e-48 - - - S - - - Protein of unknown function (DUF2795)
NBIPMDDE_00690 1.74e-131 yvqK 2.5.1.17 - S ko:K00798 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 adenosyltransferase
NBIPMDDE_00691 6.41e-192 - - - S - - - Psort location Cytoplasmic, score
NBIPMDDE_00692 1.61e-309 tolC - - MU - - - Outer membrane efflux protein
NBIPMDDE_00693 0.0 bepE_4 - - V ko:K03296,ko:K18138 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_00694 9.28e-250 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_00695 0.0 - - - U - - - WD40-like Beta Propeller Repeat
NBIPMDDE_00696 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_00697 4.33e-06 - - - - - - - -
NBIPMDDE_00699 0.0 - - - O ko:K00612 - ko00000,ko01000 Carbamoyltransferase C-terminus
NBIPMDDE_00700 0.0 - - - E - - - chaperone-mediated protein folding
NBIPMDDE_00701 3.56e-160 - - - S - - - Protein of unknown function (DUF3823)
NBIPMDDE_00702 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_00703 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_00705 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 F5 8 type C domain protein
NBIPMDDE_00706 0.0 - - - U - - - WD40-like Beta Propeller Repeat
NBIPMDDE_00707 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_00708 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_00709 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_00710 3.13e-53 hcp 1.7.99.1 - C ko:K05601 ko00910,map00910 ko00000,ko00001,ko01000 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
NBIPMDDE_00711 1.49e-82 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
NBIPMDDE_00712 2.45e-212 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Metallopeptidase family M24
NBIPMDDE_00713 1.21e-227 - - - S - - - AI-2E family transporter
NBIPMDDE_00714 5.54e-209 pldA 3.1.1.32, 3.1.1.4 - M ko:K01058 ko00564,ko00565,ko00590,ko00591,ko00592,ko01100,ko01110,map00564,map00565,map00590,map00591,map00592,map01100,map01110 ko00000,ko00001,ko01000 Phospholipase A1
NBIPMDDE_00715 0.0 mutS_2 - - L - - - ATPase domain of DNA mismatch repair MUTS family
NBIPMDDE_00716 5.82e-180 - - - O - - - Peptidase, M48 family
NBIPMDDE_00717 3.46e-110 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
NBIPMDDE_00718 1.17e-141 - - - E - - - Acetyltransferase (GNAT) domain
NBIPMDDE_00719 2.77e-291 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate synthase
NBIPMDDE_00720 8.45e-238 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NBIPMDDE_00722 1.43e-274 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NBIPMDDE_00723 1.08e-118 - - - O - - - Peptidyl-prolyl cis-trans isomerase
NBIPMDDE_00724 0.0 - - - G - - - Bacterial alpha-L-rhamnosidase C-terminal domain
NBIPMDDE_00726 4.83e-134 - 3.4.14.5 - EU ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Dipeptidyl peptidase IV (DPP IV) N-terminal region
NBIPMDDE_00727 0.0 - 3.4.14.5 - EU ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Dipeptidyl peptidase IV (DPP IV) N-terminal region
NBIPMDDE_00728 8.05e-113 - - - MP - - - NlpE N-terminal domain
NBIPMDDE_00729 4.01e-303 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
NBIPMDDE_00730 3.79e-182 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NBIPMDDE_00732 1.64e-284 - - - E ko:K00318 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 ko00000,ko00001,ko01000 Proline dehydrogenase
NBIPMDDE_00733 0.0 pruA 1.2.1.88, 1.5.5.2 - C ko:K00294,ko:K13821 ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130 ko00000,ko00001,ko01000,ko03000 1-pyrroline-5-carboxylate dehydrogenase
NBIPMDDE_00734 1.08e-39 - - - C - - - 4Fe-4S single cluster domain of Ferredoxin I
NBIPMDDE_00735 3.66e-127 - - - K - - - Helix-turn-helix XRE-family like proteins
NBIPMDDE_00736 0.0 acsA 6.2.1.1, 6.2.1.32 - I ko:K01895,ko:K08295 ko00010,ko00620,ko00627,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00627,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko01004 AMP-binding enzyme C-terminal domain
NBIPMDDE_00737 1.33e-260 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NBIPMDDE_00738 7.16e-297 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NBIPMDDE_00739 9.08e-238 argF 2.1.3.11, 2.1.3.9 - E ko:K09065,ko:K13043 ko00220,ko01100,ko01230,map00220,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
NBIPMDDE_00740 0.0 - - - P - - - Outer membrane protein beta-barrel family
NBIPMDDE_00742 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 Long-chain fatty acid--CoA ligase
NBIPMDDE_00743 3.56e-303 - - - NU - - - Lipid A 3-O-deacylase (PagL)
NBIPMDDE_00744 0.0 yqeV 2.8.4.5 - J ko:K18707 - ko00000,ko01000,ko03016 Fe-S oxidoreductase
NBIPMDDE_00745 1.33e-224 waaM 2.3.1.241 - M ko:K02517 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Lipid A Biosynthesis
NBIPMDDE_00746 1.35e-266 - - - S ko:K07011 - ko00000 glycosyl transferase family 2
NBIPMDDE_00747 2.59e-144 - - - U ko:K05595 - ko00000,ko02000 MarC family integral membrane protein
NBIPMDDE_00748 8.59e-314 - - - S - - - Peptide-N-glycosidase F, N terminal
NBIPMDDE_00749 0.0 - - - C - - - Hydrogenase
NBIPMDDE_00750 7.67e-80 folB 1.13.11.81, 4.1.2.25, 5.1.99.8 - H ko:K01633 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NBIPMDDE_00751 2.96e-56 - - - M - - - Integral membrane protein CcmA involved in cell shape determination
NBIPMDDE_00752 2.84e-284 - - - S - - - dextransucrase activity
NBIPMDDE_00753 1.05e-151 ytrE_3 - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
NBIPMDDE_00754 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
NBIPMDDE_00755 8.26e-290 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
NBIPMDDE_00756 2.2e-311 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
NBIPMDDE_00757 1.59e-271 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
NBIPMDDE_00758 2.92e-278 - - - M ko:K02005 - ko00000 HlyD family secretion protein
NBIPMDDE_00760 3.34e-208 - - - S - - - Putative beta-lactamase-inhibitor-like, PepSY-like
NBIPMDDE_00761 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
NBIPMDDE_00762 4.13e-294 dcuB - - S ko:K07791,ko:K07792 ko02020,map02020 ko00000,ko00001,ko02000 Anaerobic c4-dicarboxylate membrane transporter
NBIPMDDE_00763 0.0 covS - - T - - - HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NBIPMDDE_00765 5.64e-315 - - - T ko:K02481 - ko00000,ko02022 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
NBIPMDDE_00766 6.56e-188 - - - N ko:K02557 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02000,ko02035 OmpA family
NBIPMDDE_00767 2.19e-289 - - - G ko:K02429 - ko00000,ko02000 Major Facilitator Superfamily
NBIPMDDE_00768 0.0 - - - I - - - Domain of unknown function (DUF4153)
NBIPMDDE_00769 3.02e-92 hsp20 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
NBIPMDDE_00770 6.08e-112 ftnA 1.16.3.2 - P ko:K02217 - ko00000,ko01000 Iron-storage protein
NBIPMDDE_00771 7.44e-184 - - - E - - - GDSL-like Lipase/Acylhydrolase
NBIPMDDE_00772 4.05e-208 - - - E ko:K02002 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Substrate binding domain of ABC-type glycine betaine transport system
NBIPMDDE_00773 3.01e-185 - - - P ko:K02001 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
NBIPMDDE_00774 1.35e-282 proV 3.6.3.32 - E ko:K02000 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Domain in cystathionine beta-synthase and other proteins.
NBIPMDDE_00775 2.66e-249 - 3.1.3.2 - S ko:K14379 ko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323 ko00000,ko00001,ko01000 Calcineurin-like phosphoesterase
NBIPMDDE_00776 0.0 - - - - - - - -
NBIPMDDE_00777 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_00778 0.0 - - - S - - - Peptidase M64
NBIPMDDE_00779 0.0 - - - U - - - WD40-like Beta Propeller Repeat
NBIPMDDE_00780 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_00781 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_00782 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_00783 8.89e-176 - - - S ko:K06911 - ko00000 Belongs to the pirin family
NBIPMDDE_00784 0.0 - 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the synthesis of xanthosine monophosphate by the NAD dependent oxidation of inosine monophosphate
NBIPMDDE_00786 3.25e-308 natB - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC transporter permease
NBIPMDDE_00787 7.33e-221 natA - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
NBIPMDDE_00788 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NBIPMDDE_00789 0.0 - - - O - - - Tetratricopeptide repeat protein
NBIPMDDE_00791 1.16e-88 - - - L - - - Belongs to the 'phage' integrase family
NBIPMDDE_00792 2.53e-240 - - - S - - - GGGtGRT protein
NBIPMDDE_00793 3.2e-37 - - - - - - - -
NBIPMDDE_00794 5.91e-167 - - - C - - - COG0822 NifU homolog involved in Fe-S cluster formation
NBIPMDDE_00795 4.07e-268 - - - CO - - - PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NBIPMDDE_00796 0.0 - - - T - - - Y_Y_Y domain
NBIPMDDE_00797 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_00798 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_00799 6.64e-259 - - - G - - - Peptidase of plants and bacteria
NBIPMDDE_00800 0.0 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_00801 0.0 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_00802 0.0 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_00803 4.48e-280 - - - S - - - Protein of unknown function DUF262
NBIPMDDE_00804 1.73e-246 - - - S - - - AAA ATPase domain
NBIPMDDE_00805 6.91e-175 - - - - - - - -
NBIPMDDE_00806 0.0 pfp 2.7.1.11, 2.7.1.90 - H ko:K00895,ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
NBIPMDDE_00807 2.98e-80 - - - S - - - TM2 domain protein
NBIPMDDE_00808 3.61e-144 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin synthase subunit alpha
NBIPMDDE_00809 8.68e-129 - - - C - - - nitroreductase
NBIPMDDE_00810 1.84e-316 - - - V - - - Polysaccharide biosynthesis C-terminal domain
NBIPMDDE_00811 1.55e-308 yihY - - S ko:K07058 - ko00000 ribonuclease BN
NBIPMDDE_00812 0.0 degQ - - O - - - deoxyribonuclease HsdR
NBIPMDDE_00813 3.25e-192 rpoD - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NBIPMDDE_00814 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_00815 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_00816 0.0 - - - C - - - FAD dependent oxidoreductase
NBIPMDDE_00817 0.0 - - - Q - - - FAD dependent oxidoreductase
NBIPMDDE_00818 0.0 - - - Q - - - FAD dependent oxidoreductase
NBIPMDDE_00819 0.0 - - - EI - - - Carboxylesterase family
NBIPMDDE_00820 2.49e-170 fucA 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
NBIPMDDE_00821 0.0 - - - K - - - Putative DNA-binding domain
NBIPMDDE_00822 5.61e-273 - - - EGP - - - Major Facilitator Superfamily
NBIPMDDE_00823 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
NBIPMDDE_00824 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
NBIPMDDE_00825 7.14e-157 - - - V ko:K02003 - ko00000,ko00002,ko02000 bacteriocin export ABC transporter, lactococcin 972 group
NBIPMDDE_00826 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
NBIPMDDE_00827 2.41e-197 - - - - - - - -
NBIPMDDE_00828 0.0 - 2.7.13.3 - T ko:K02484,ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
NBIPMDDE_00829 1.18e-156 srrA - - T ko:K07657,ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NBIPMDDE_00830 1.03e-206 - 3.1.3.15 - E ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidinol phosphatase
NBIPMDDE_00831 2.86e-287 kbl 2.3.1.29 - H ko:K00639 ko00260,map00260 ko00000,ko00001,ko01000,ko01007 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA
NBIPMDDE_00833 4.36e-233 ltd - - GM - - - NAD dependent epimerase dehydratase family
NBIPMDDE_00834 1.16e-239 gpr - - C ko:K19265 - ko00000,ko01000 Aldo/keto reductase family
NBIPMDDE_00835 0.0 - - - L - - - PD-(D/E)XK nuclease superfamily
NBIPMDDE_00836 1.93e-167 - - - S - - - Conserved hypothetical protein (DUF2461)
NBIPMDDE_00837 2.76e-215 - - - K - - - Cupin domain
NBIPMDDE_00838 3.38e-269 araJ - - EGP ko:K08156 - ko00000,ko02000 Major Facilitator Superfamily
NBIPMDDE_00839 1.23e-158 - - - T - - - Transcriptional regulator
NBIPMDDE_00840 2.09e-303 qseC - - T - - - Histidine kinase
NBIPMDDE_00841 1.66e-219 cobD 6.3.1.10 - H ko:K02227 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
NBIPMDDE_00842 1.04e-126 - 5.4.99.21 - J ko:K06182 - ko00000,ko01000,ko03009 S4 domain protein
NBIPMDDE_00843 1.2e-121 cobU 2.7.1.156, 2.7.7.62 - H ko:K02231 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 cobinamide kinase
NBIPMDDE_00844 6.09e-254 cobT 2.4.2.21 - F ko:K00768 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
NBIPMDDE_00845 3.81e-173 cobS 2.7.8.26 - H ko:K02233 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
NBIPMDDE_00846 1.15e-131 cobC 3.1.3.73 - G ko:K02226 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 phosphoglycerate mutase
NBIPMDDE_00847 3.74e-204 - - - S - - - Putative beta-lactamase-inhibitor-like, PepSY-like
NBIPMDDE_00848 3.88e-97 - - - S - - - Putative beta-lactamase-inhibitor-like, PepSY-like
NBIPMDDE_00849 0.0 - 3.4.21.50 - O ko:K01337 - ko00000,ko01000,ko01002 Trypsin-like peptidase domain
NBIPMDDE_00850 0.0 - - - NU - - - Tetratricopeptide repeat protein
NBIPMDDE_00851 0.0 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_00852 0.0 - - - - - - - -
NBIPMDDE_00853 0.0 - - - G - - - Pectate lyase superfamily protein
NBIPMDDE_00854 0.0 - - - G - - - alpha-L-rhamnosidase
NBIPMDDE_00855 1.19e-176 - - - G - - - Pectate lyase superfamily protein
NBIPMDDE_00856 0.0 - - - G - - - Pectate lyase superfamily protein
NBIPMDDE_00857 0.0 - - - U - - - WD40-like Beta Propeller Repeat
NBIPMDDE_00858 0.0 - - - - - - - -
NBIPMDDE_00859 0.0 - - - S - - - Pfam:SusD
NBIPMDDE_00860 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_00861 4.13e-66 - - - K - - - AraC-like ligand binding domain
NBIPMDDE_00862 7.97e-113 - - - K - - - AraC-like ligand binding domain
NBIPMDDE_00863 0.0 - - - M - - - Peptidase family C69
NBIPMDDE_00864 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
NBIPMDDE_00865 1.38e-54 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NBIPMDDE_00866 3.87e-132 - - - K - - - Helix-turn-helix domain
NBIPMDDE_00867 0.0 - - - IQ ko:K00666 - ko00000,ko01000,ko01004 AMP-binding enzyme C-terminal domain
NBIPMDDE_00868 0.0 ahcY 3.3.1.1 - H ko:K01251 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
NBIPMDDE_00869 1.03e-194 - - - H - - - Methyltransferase domain
NBIPMDDE_00870 4.06e-53 - - - M - - - glycosyl transferase family 2
NBIPMDDE_00871 0.0 - - - S - - - membrane
NBIPMDDE_00872 3.05e-185 - - - M - - - Glycosyl transferase family 2
NBIPMDDE_00873 1.73e-306 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NBIPMDDE_00874 0.0 - 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 DnaB-like helicase N terminal domain
NBIPMDDE_00877 9.66e-51 - - - S - - - Domain of unknown function (DUF4248)
NBIPMDDE_00878 6.57e-90 - - - L - - - regulation of translation
NBIPMDDE_00879 1.03e-105 - - - NU ko:K02395 - ko00000,ko02035 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NBIPMDDE_00881 4.92e-267 eryC - - E - - - Belongs to the DegT DnrJ EryC1 family
NBIPMDDE_00882 5.79e-89 - - - M - - - WxcM-like, C-terminal
NBIPMDDE_00883 4.76e-249 - - - M - - - glycosyl transferase family 8
NBIPMDDE_00884 2.12e-225 - - - S - - - Glycosyl transferase family 2
NBIPMDDE_00885 2.37e-311 - 1.1.1.136 - M ko:K02474,ko:K13015 ko00520,map00520 ko00000,ko00001,ko01000,ko01005 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NBIPMDDE_00886 1.11e-203 - - - S - - - Glycosyl transferase family 11
NBIPMDDE_00887 3.21e-244 cpsH - GT8 M ko:K06320,ko:K12986 - ko00000,ko01000,ko01003,ko01005 Protein conserved in bacteria
NBIPMDDE_00888 5.71e-157 - - - M - - - transferase activity, transferring glycosyl groups
NBIPMDDE_00889 3.36e-271 epsC 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-N-acetylglucosamine 2-epimerase
NBIPMDDE_00890 5.12e-107 - 2.3.1.28 - S ko:K00638 - br01600,ko00000,ko01000,ko01504 Bacterial transferase hexapeptide (six repeats)
NBIPMDDE_00892 0.0 - - - S - - - Polysaccharide biosynthesis protein
NBIPMDDE_00893 1.59e-10 - - - L - - - Nucleotidyltransferase domain
NBIPMDDE_00894 0.0 ugd 1.1.1.22 - M ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NBIPMDDE_00895 7.76e-281 yghO - - K - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_00896 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 DNA topoisomerase (ATP-hydrolyzing)
NBIPMDDE_00897 8.06e-123 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NBIPMDDE_00898 0.0 ctpA 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
NBIPMDDE_00900 2.42e-63 yafQ2 - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
NBIPMDDE_00901 2.92e-120 - - - P ko:K07240 - ko00000,ko02000 Chromate transporter
NBIPMDDE_00902 1.88e-124 - - - P ko:K07240 - ko00000,ko02000 Chromate transporter
NBIPMDDE_00903 1.31e-304 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 Outer membrane efflux protein
NBIPMDDE_00904 7.65e-272 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_00905 2.68e-171 - - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
NBIPMDDE_00906 2.23e-280 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
NBIPMDDE_00907 1.63e-241 cheA - - T - - - Histidine kinase
NBIPMDDE_00908 3.96e-164 yehT_1 - - KT - - - LytTr DNA-binding domain
NBIPMDDE_00909 0.0 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 D-alanyl-D-alanine carboxypeptidase
NBIPMDDE_00910 1.44e-257 - - - S - - - Permease
NBIPMDDE_00912 3.66e-98 - - - MP - - - NlpE N-terminal domain
NBIPMDDE_00913 7.51e-203 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family
NBIPMDDE_00914 0.0 - 3.2.1.80 - G ko:K03332 ko00051,map00051 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
NBIPMDDE_00915 3.01e-163 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
NBIPMDDE_00916 5.6e-45 - - - - - - - -
NBIPMDDE_00917 0.0 uvrA1 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
NBIPMDDE_00918 0.0 - - - G - - - Glycosyl hydrolase family 2, sugar binding domain protein
NBIPMDDE_00919 0.0 - - - S - - - Glycosyl hydrolase-like 10
NBIPMDDE_00920 8.15e-205 - - - K - - - transcriptional regulator (AraC family)
NBIPMDDE_00921 3.14e-278 - - - Q - - - Clostripain family
NBIPMDDE_00922 0.0 - - - S - - - Lamin Tail Domain
NBIPMDDE_00923 7.85e-241 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NBIPMDDE_00924 1e-216 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
NBIPMDDE_00925 1.92e-306 - - - - - - - -
NBIPMDDE_00926 0.0 trpB 4.2.1.20 - E ko:K06001 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
NBIPMDDE_00927 1.35e-92 - - - S - - - Family of unknown function (DUF3836)
NBIPMDDE_00928 1.32e-39 - - - K ko:K07727 - ko00000,ko03000 Cro/C1-type HTH DNA-binding domain
NBIPMDDE_00930 4.67e-155 - - - S - - - Protein of unknown function (DUF2975)
NBIPMDDE_00931 0.0 sppA - - OU ko:K04773 - ko00000,ko01000,ko01002 signal peptide peptidase SppA, 67K type
NBIPMDDE_00932 3.72e-167 - - - S - - - Conserved hypothetical protein (DUF2461)
NBIPMDDE_00933 0.0 - - - M ko:K07001 - ko00000 esterase of the alpha-beta hydrolase superfamily
NBIPMDDE_00934 3.92e-137 - - - - - - - -
NBIPMDDE_00935 4.66e-300 - - - S - - - 6-bladed beta-propeller
NBIPMDDE_00936 0.0 - - - S - - - Tetratricopeptide repeats
NBIPMDDE_00937 0.0 - - - KMT - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
NBIPMDDE_00938 1.13e-81 - - - K - - - Transcriptional regulator
NBIPMDDE_00939 8.42e-215 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
NBIPMDDE_00940 3.76e-268 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
NBIPMDDE_00941 1.31e-94 - - - S ko:K07107 - ko00000,ko01000 acyl-CoA thioester hydrolase, YbgC YbaW family
NBIPMDDE_00942 2.71e-300 prtC - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 collagenase
NBIPMDDE_00943 1.26e-18 - - - - - - - -
NBIPMDDE_00944 0.0 - - - G - - - COG NOG26513 non supervised orthologous group
NBIPMDDE_00945 0.0 cstA - - T ko:K06200 - ko00000 Carbon starvation protein
NBIPMDDE_00946 1.25e-92 - - - S ko:K09117 - ko00000 Glutamyl-tRNA amidotransferase
NBIPMDDE_00947 2.31e-312 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NBIPMDDE_00948 1.55e-309 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
NBIPMDDE_00949 1.81e-167 ftsQ - - M ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein FtsQ
NBIPMDDE_00950 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
NBIPMDDE_00951 1.93e-266 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NBIPMDDE_00952 0.0 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
NBIPMDDE_00953 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NBIPMDDE_00954 8.33e-294 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NBIPMDDE_00955 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NBIPMDDE_00956 0.0 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Penicillin-binding protein, transpeptidase domain protein
NBIPMDDE_00957 8.39e-68 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_00958 6.52e-219 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
NBIPMDDE_00959 0.0 - - - - - - - -
NBIPMDDE_00960 1.45e-205 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_00961 2.22e-278 lolE - - M ko:K09808,ko:K09815 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Efflux ABC transporter, permease protein
NBIPMDDE_00962 2.67e-69 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NBIPMDDE_00963 3.05e-149 - 2.1.1.104 - S ko:K00588 ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110 ko00000,ko00001,ko00002,ko01000 O-Methyltransferase
NBIPMDDE_00964 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
NBIPMDDE_00965 5.83e-100 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
NBIPMDDE_00966 1.42e-214 xerC - - D ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
NBIPMDDE_00967 0.0 - - - G - - - Domain of unknown function (DUF4954)
NBIPMDDE_00968 1.36e-207 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NBIPMDDE_00969 1.13e-77 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NBIPMDDE_00970 1.04e-54 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NBIPMDDE_00971 1.55e-34 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
NBIPMDDE_00972 3.95e-98 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NBIPMDDE_00973 5.19e-168 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NBIPMDDE_00974 1.52e-89 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NBIPMDDE_00975 2.12e-58 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NBIPMDDE_00976 5.7e-196 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NBIPMDDE_00977 1.66e-61 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
NBIPMDDE_00978 2.7e-139 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
NBIPMDDE_00979 2.73e-146 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NBIPMDDE_00980 2.7e-62 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
NBIPMDDE_00981 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NBIPMDDE_00982 9.78e-107 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
NBIPMDDE_00983 1.52e-89 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NBIPMDDE_00984 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NBIPMDDE_00985 1.14e-68 - - - S - - - COG NOG23401 non supervised orthologous group
NBIPMDDE_00986 0.0 - - - S - - - OstA-like protein
NBIPMDDE_00987 0.0 surA 5.2.1.8 - M ko:K03771 - ko00000,ko01000,ko03110 peptidylprolyl isomerase
NBIPMDDE_00988 5.43e-195 - - - O - - - COG NOG23400 non supervised orthologous group
NBIPMDDE_00989 0.0 - 5.2.1.8 - M ko:K03771 - ko00000,ko01000,ko03110 peptidylprolyl isomerase
NBIPMDDE_00990 0.000174 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
NBIPMDDE_00991 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
NBIPMDDE_00992 1.94e-287 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NBIPMDDE_00993 4.67e-155 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NBIPMDDE_00994 1.56e-312 tig - - O ko:K03545 - ko00000 Trigger factor
NBIPMDDE_00995 9.22e-49 - - - S - - - RNA recognition motif
NBIPMDDE_00996 8.38e-208 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
NBIPMDDE_00997 1.14e-177 lptB - - S ko:K06861 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
NBIPMDDE_00998 2.17e-162 mlaE - - Q ko:K02066 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component
NBIPMDDE_00999 5.87e-183 metN - - Q ko:K02065 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
NBIPMDDE_01000 0.0 - - - S - - - Belongs to the peptidase M16 family
NBIPMDDE_01001 5e-311 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NBIPMDDE_01002 0.000133 - - - - - - - -
NBIPMDDE_01003 1.64e-103 folK 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NBIPMDDE_01004 8.68e-256 queA 2.4.99.17 - J ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
NBIPMDDE_01005 1.1e-165 truB 5.4.99.25 - J ko:K03177 - ko00000,ko01000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NBIPMDDE_01006 6.56e-182 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
NBIPMDDE_01007 2.26e-49 fjo13 - - S - - - Protein of unknown function (DUF3098)
NBIPMDDE_01008 1.3e-185 ftsX - - D ko:K09811 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily
NBIPMDDE_01009 2.42e-38 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NBIPMDDE_01010 1.48e-122 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NBIPMDDE_01011 2.79e-54 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NBIPMDDE_01012 3.51e-88 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NBIPMDDE_01013 8.32e-128 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NBIPMDDE_01014 4.21e-72 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NBIPMDDE_01015 6.86e-113 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NBIPMDDE_01016 2.04e-31 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 50S ribosomal protein L30
NBIPMDDE_01017 4.92e-94 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
NBIPMDDE_01018 5.02e-311 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
NBIPMDDE_01019 2.33e-193 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine aminopeptidase
NBIPMDDE_01020 2.82e-44 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NBIPMDDE_01021 3.05e-18 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
NBIPMDDE_01022 5.07e-81 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NBIPMDDE_01023 1.01e-86 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NBIPMDDE_01024 3.59e-140 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NBIPMDDE_01025 5.06e-234 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NBIPMDDE_01026 3.79e-87 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 50S ribosomal protein L17
NBIPMDDE_01029 2.14e-110 - - - NU ko:K02395 - ko00000,ko02035 amidase activity
NBIPMDDE_01030 1.66e-96 - - - L - - - DNA-binding protein
NBIPMDDE_01031 1.94e-09 - - - S - - - Domain of unknown function (DUF4248)
NBIPMDDE_01032 0.0 - - - L - - - Protein of unknown function (DUF3987)
NBIPMDDE_01034 1.1e-20 - - - - - - - -
NBIPMDDE_01035 1.36e-211 - - - S - - - PD-(D/E)XK nuclease family transposase
NBIPMDDE_01036 6.03e-307 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
NBIPMDDE_01037 0.0 - 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Calcium-translocating P-type ATPase, PMCA-type
NBIPMDDE_01038 7.91e-115 - - - S - - - Domain of unknown function (DUF4251)
NBIPMDDE_01039 3.54e-235 - - - S ko:K07139 - ko00000 radical SAM protein
NBIPMDDE_01040 0.0 dpp 3.4.14.5 - EU ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase, S9A B C family, catalytic domain protein
NBIPMDDE_01041 2.73e-202 lipA 2.8.1.8 - H ko:K03644 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
NBIPMDDE_01042 1.58e-261 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_01043 3.36e-120 - - - S ko:K07095 - ko00000 Phosphoesterase
NBIPMDDE_01044 0.0 ppk 2.7.4.1 - H ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NBIPMDDE_01045 1.82e-152 - - - S - - - Tetratricopeptide repeat
NBIPMDDE_01046 2.65e-247 - - - L - - - Domain of unknown function (DUF4837)
NBIPMDDE_01047 0.0 - 3.4.21.50 - E ko:K01337 - ko00000,ko01000,ko01002 Belongs to the peptidase S1B family
NBIPMDDE_01050 0.0 rsmF - - J - - - NOL1 NOP2 sun family
NBIPMDDE_01051 0.0 fusA2 - - J ko:K02355 - ko00000,ko03012,ko03029 elongation factor G
NBIPMDDE_01052 1.62e-258 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
NBIPMDDE_01054 1.79e-116 - - - S - - - Zeta toxin
NBIPMDDE_01055 3.6e-31 - - - - - - - -
NBIPMDDE_01057 4.15e-282 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
NBIPMDDE_01058 4.21e-202 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NBIPMDDE_01059 4.92e-123 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NBIPMDDE_01060 0.0 - - - S - - - Alpha-2-macroglobulin family
NBIPMDDE_01062 1.03e-84 - - - S - - - Protein of unknown function (DUF1573)
NBIPMDDE_01063 1.26e-266 - - - S - - - Protein of unknown function (DUF1573)
NBIPMDDE_01064 4.52e-262 argK - - E ko:K07588 - ko00000,ko01000 LAO AO transport system ATPase
NBIPMDDE_01065 0.0 - - - S - - - PQQ enzyme repeat
NBIPMDDE_01066 7.16e-232 pfkA 2.7.1.11 - G ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
NBIPMDDE_01067 1.59e-210 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NBIPMDDE_01068 2.29e-177 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
NBIPMDDE_01069 3.67e-240 porQ - - I - - - penicillin-binding protein
NBIPMDDE_01070 2.16e-118 tonB2 - - M ko:K03832 - ko00000,ko02000 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
NBIPMDDE_01071 5.25e-233 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
NBIPMDDE_01072 1.02e-192 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD
NBIPMDDE_01074 1.42e-161 exbB - - U ko:K03561 - ko00000,ko02000 MotA TolQ ExbB proton channel family protein
NBIPMDDE_01075 2.91e-104 - - - S - - - Psort location CytoplasmicMembrane, score
NBIPMDDE_01076 3.89e-132 - - - U - - - Biopolymer transporter ExbD
NBIPMDDE_01077 1.1e-98 - - - U ko:K03559 - ko00000,ko02000 Biopolymer transporter ExbD
NBIPMDDE_01078 2.29e-136 - - - K - - - Acetyltransferase (GNAT) domain
NBIPMDDE_01079 9.4e-110 asnC - - K ko:K03718 - ko00000,ko03000 Transcriptional regulator
NBIPMDDE_01080 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
NBIPMDDE_01081 2.09e-271 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
NBIPMDDE_01082 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NBIPMDDE_01083 1.78e-29 - - - - - - - -
NBIPMDDE_01084 3.27e-91 - - - S - - - ACT domain protein
NBIPMDDE_01085 0.0 paaK 6.2.1.30 - H ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 ko00000,ko00001,ko01000 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
NBIPMDDE_01088 1.16e-300 mleN - - C ko:K03315 - ko00000,ko02000 Na H antiporter
NBIPMDDE_01089 0.0 - - - M - - - CarboxypepD_reg-like domain
NBIPMDDE_01090 1.85e-211 fieF - - P - - - Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NBIPMDDE_01091 0.0 guaD 3.5.4.3 - F ko:K01487 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 Amidohydrolase family
NBIPMDDE_01092 4.27e-314 - - - S - - - Domain of unknown function (DUF5103)
NBIPMDDE_01093 0.0 nqrA 1.6.5.8 - C ko:K00346 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NBIPMDDE_01094 2.32e-279 nqrB 1.6.5.8 - C ko:K00347 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NBIPMDDE_01095 1.34e-193 nqrC 1.6.5.8 - C ko:K00348 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NBIPMDDE_01096 5.22e-137 nqrD 1.6.5.8 - C ko:K00349 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NBIPMDDE_01097 2.32e-138 nqrE 1.6.5.8 - C ko:K00350 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NBIPMDDE_01098 0.0 nqrF 1.6.5.8 - C ko:K00351 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway
NBIPMDDE_01100 9.57e-106 - - - V - - - Type I restriction enzyme R protein N terminus (HSDR_N)
NBIPMDDE_01101 5.46e-186 amn 3.2.2.4 - F ko:K01241 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
NBIPMDDE_01102 8.8e-240 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
NBIPMDDE_01103 2.54e-101 - - - K - - - Helix-turn-helix XRE-family like proteins
NBIPMDDE_01104 4.7e-192 pyrK - - C ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(
NBIPMDDE_01105 8.92e-219 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
NBIPMDDE_01106 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Glycosyl hydrolase family 36 C-terminal domain
NBIPMDDE_01107 1.13e-157 - - - S ko:K07507 - ko00000,ko02000 MgtC family
NBIPMDDE_01108 3.28e-110 - - - S - - - Putative redox-active protein (C_GCAxxG_C_C)
NBIPMDDE_01109 9.45e-67 - - - S - - - Stress responsive
NBIPMDDE_01110 4.41e-288 serB 3.1.3.3 - ET ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 phosphoserine phosphatase
NBIPMDDE_01111 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Aminopeptidase P, N-terminal domain
NBIPMDDE_01112 6.84e-103 - - - S - - - COG NOG19145 non supervised orthologous group
NBIPMDDE_01113 4.68e-198 - 2.7.1.33 - H ko:K09680 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenate kinase
NBIPMDDE_01114 5.74e-79 - - - K - - - DRTGG domain
NBIPMDDE_01115 3.4e-93 - - - T - - - Histidine kinase-like ATPase domain
NBIPMDDE_01116 0.0 - - - C - - - Iron only hydrogenase large subunit, C-terminal domain
NBIPMDDE_01117 1.54e-73 - - - K - - - DRTGG domain
NBIPMDDE_01118 1.06e-177 - - - S - - - DNA polymerase alpha chain like domain
NBIPMDDE_01119 4.87e-123 - - - T - - - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NBIPMDDE_01124 0.0 miaB 2.8.4.3 - J ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NBIPMDDE_01127 0.0 scpC 2.8.3.18, 3.1.2.1 - C ko:K01067,ko:K18118 ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 acetyl-CoA hydrolase
NBIPMDDE_01128 3.97e-277 - - - S - - - ATPase domain predominantly from Archaea
NBIPMDDE_01129 1.62e-185 idnO 1.1.1.69 - IQ ko:K00046 - ko00000,ko01000 KR domain
NBIPMDDE_01130 2.44e-209 kduI 5.3.1.17 - G ko:K01815 ko00040,map00040 ko00000,ko00001,ko01000 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
NBIPMDDE_01131 6.2e-307 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2264)
NBIPMDDE_01132 4.3e-299 - - - S - - - Glycosyl Hydrolase Family 88
NBIPMDDE_01133 0.0 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
NBIPMDDE_01134 3.28e-201 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 phosphate transport system permease
NBIPMDDE_01135 3.16e-181 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NBIPMDDE_01136 1.56e-155 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
NBIPMDDE_01137 5.09e-308 - - - M - - - Phosphate-selective porin O and P
NBIPMDDE_01138 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65, N-terminal domain
NBIPMDDE_01139 3.39e-266 celC 3.2.1.4 GH5,GH9 G ko:K01179 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 5 (cellulase A) family
NBIPMDDE_01140 0.0 msbA - - V ko:K06147,ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 ABC transporter, ATP-binding protein
NBIPMDDE_01141 2.69e-114 - - - - - - - -
NBIPMDDE_01142 1.03e-267 - - - C - - - Radical SAM domain protein
NBIPMDDE_01143 0.0 - - - G - - - Domain of unknown function (DUF4091)
NBIPMDDE_01145 0.0 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
NBIPMDDE_01146 6.97e-208 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NBIPMDDE_01147 3.37e-250 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NBIPMDDE_01148 1.73e-40 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
NBIPMDDE_01149 6.51e-140 - - - S - - - Uncharacterized ACR, COG1399
NBIPMDDE_01150 6e-267 vicK - - T - - - Histidine kinase
NBIPMDDE_01151 0.0 - - - P - - - Citrate transporter
NBIPMDDE_01152 3.71e-51 - - - S - - - 23S rRNA-intervening sequence protein
NBIPMDDE_01153 5.23e-152 cysC 2.7.1.25 - F ko:K00860 ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of activated sulfate
NBIPMDDE_01154 3e-221 cysD 2.7.7.4 - H ko:K00957 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase
NBIPMDDE_01155 0.0 cysN 2.7.1.25, 2.7.7.4 - P ko:K00955,ko:K00956 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily
NBIPMDDE_01156 1.38e-277 - - - S - - - Sulfotransferase family
NBIPMDDE_01157 4.55e-237 - - - S - - - Putative carbohydrate metabolism domain
NBIPMDDE_01158 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NBIPMDDE_01159 2.49e-110 - - - - - - - -
NBIPMDDE_01160 1.43e-203 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NBIPMDDE_01161 1.56e-132 - - - CO - - - Antioxidant, AhpC TSA family
NBIPMDDE_01162 6.63e-80 - - - S - - - GtrA-like protein
NBIPMDDE_01163 3.56e-234 - - - K - - - AraC-like ligand binding domain
NBIPMDDE_01164 0.0 rhaB 2.7.1.5, 2.7.1.51 - G ko:K00848,ko:K00879 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 FGGY family of carbohydrate kinases, N-terminal domain
NBIPMDDE_01165 3.94e-312 rhaA 5.3.1.14 - G ko:K01813 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 L-rhamnose isomerase (RhaA)
NBIPMDDE_01166 3.46e-242 rhaT - - EG ko:K02856 - ko00000,ko02000 L-rhamnose-proton symport protein (RhaT)
NBIPMDDE_01167 3.06e-196 rhaD 4.1.2.19 - G ko:K01629 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 Class II Aldolase and Adducin N-terminal domain
NBIPMDDE_01168 0.0 - - - G - - - Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
NBIPMDDE_01169 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
NBIPMDDE_01170 0.0 - - - G - - - Bacterial alpha-L-rhamnosidase C-terminal domain
NBIPMDDE_01171 0.0 - - - KMT - - - BlaR1 peptidase M56
NBIPMDDE_01172 3.39e-78 - - - K - - - Penicillinase repressor
NBIPMDDE_01173 9.44e-282 nspC 4.1.1.96 - E ko:K13747 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 carboxynorspermidine decarboxylase
NBIPMDDE_01174 1.86e-218 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
NBIPMDDE_01175 0.0 rimO 2.8.4.4 - J ko:K14441 - ko00000,ko01000,ko03009 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
NBIPMDDE_01176 3.54e-61 himA - - L ko:K03530,ko:K04764 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
NBIPMDDE_01177 9.94e-250 - - - L - - - Belongs to the bacterial histone-like protein family
NBIPMDDE_01178 7.64e-225 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
NBIPMDDE_01179 2.62e-204 - - - S - - - protein (some members contain a von Willebrand factor type A (vWA) domain)
NBIPMDDE_01180 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_01181 0.0 - - - K ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_01182 4.45e-108 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 N-acetylmuramoyl-L-alanine amidase
NBIPMDDE_01183 4.92e-05 - - - - - - - -
NBIPMDDE_01184 3.46e-104 - - - L - - - regulation of translation
NBIPMDDE_01185 3.2e-49 - - - S - - - Domain of unknown function (DUF4248)
NBIPMDDE_01186 0.0 - - - S - - - Virulence-associated protein E
NBIPMDDE_01188 0.0 - - - S - - - Putative oxidoreductase C terminal domain
NBIPMDDE_01189 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
NBIPMDDE_01190 0.0 - - - K ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_01191 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_01192 2.94e-204 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_01194 1.48e-128 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_01195 3.52e-254 - - - S - - - Endonuclease/Exonuclease/phosphatase family
NBIPMDDE_01196 0.0 rng - - J ko:K08301 - ko00000,ko01000,ko03009,ko03019 ribonuclease G
NBIPMDDE_01197 8.94e-56 hupA - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
NBIPMDDE_01198 1.64e-304 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 A G-specific adenine glycosylase
NBIPMDDE_01199 2.96e-111 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
NBIPMDDE_01200 4.22e-303 gldE - - S - - - gliding motility-associated protein GldE
NBIPMDDE_01201 4.79e-140 gldD - - S - - - Gliding motility-associated lipoprotein GldD
NBIPMDDE_01202 1.34e-145 sfp - - H - - - Belongs to the P-Pant transferase superfamily
NBIPMDDE_01203 1.1e-179 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Shikimate
NBIPMDDE_01204 4.85e-183 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
NBIPMDDE_01205 1.02e-230 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis
NBIPMDDE_01206 4.01e-236 phoH - - T ko:K06217 - ko00000 Phosphate starvation protein PhoH
NBIPMDDE_01208 3.95e-33 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NBIPMDDE_01209 2.02e-305 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NBIPMDDE_01210 0.0 aprN - - O - - - Subtilase family
NBIPMDDE_01211 4.68e-109 asnC - - K ko:K03718 - ko00000,ko03000 Transcriptional regulator
NBIPMDDE_01212 1.61e-165 - 5.2.1.8 - M ko:K03772,ko:K03773 - ko00000,ko01000,ko03110 Peptidyl-prolyl cis-trans isomerase
NBIPMDDE_01213 2.97e-136 - 5.2.1.8 - O ko:K03772,ko:K03773 - ko00000,ko01000,ko03110 Peptidyl-prolyl cis-trans isomerase
NBIPMDDE_01214 8.98e-296 - - - G - - - Glycosyl hydrolase family 76
NBIPMDDE_01215 0.0 - - - S ko:K09704 - ko00000 DUF1237
NBIPMDDE_01216 2.32e-169 cobB - - K ko:K12410 - ko00000,ko01000 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NBIPMDDE_01217 0.0 nhaC - - C ko:K03315 - ko00000,ko02000 Na+/H+ antiporter family
NBIPMDDE_01218 5.81e-243 sstT - - U - - - Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
NBIPMDDE_01219 8.12e-126 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
NBIPMDDE_01220 0.0 - - - M ko:K08676 - ko00000,ko01000,ko01002 Tricorn protease homolog
NBIPMDDE_01222 0.0 - - - E ko:K21572 - ko00000,ko02000 Starch-binding associating with outer membrane
NBIPMDDE_01223 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_01224 7.48e-235 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
NBIPMDDE_01225 9.61e-131 - - - K ko:K03088 - ko00000,ko03021 ECF sigma factor
NBIPMDDE_01226 0.0 - - - M - - - Tricorn protease homolog
NBIPMDDE_01227 3.7e-141 - - - S - - - Lysine exporter LysO
NBIPMDDE_01228 2.96e-55 - - - S - - - Lysine exporter LysO
NBIPMDDE_01229 4.44e-91 - - - - - - - -
NBIPMDDE_01230 0.0 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_01231 3.6e-67 - - - S - - - Belongs to the UPF0145 family
NBIPMDDE_01232 7.36e-173 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Chromosome partitioning protein ParA
NBIPMDDE_01233 0.0 - - - - - - - -
NBIPMDDE_01236 0.0 - - - L - - - Protein of unknown function (DUF3987)
NBIPMDDE_01237 4.56e-99 - - - L - - - regulation of translation
NBIPMDDE_01238 1.61e-44 - - - S - - - Domain of unknown function (DUF4248)
NBIPMDDE_01239 2.27e-119 - - - NU ko:K02395 - ko00000,ko02035 amidase activity
NBIPMDDE_01241 3.19e-60 - - - - - - - -
NBIPMDDE_01242 1.58e-208 rnz 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
NBIPMDDE_01243 4.81e-276 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 Cytochrome C oxidase assembly protein
NBIPMDDE_01244 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 oxidase, subunit
NBIPMDDE_01245 1.64e-68 - - - S - - - Domain of unknown function (DUF4492)
NBIPMDDE_01246 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
NBIPMDDE_01247 6.74e-209 - - - G - - - Domain of Unknown Function (DUF1080)
NBIPMDDE_01248 6.02e-237 - - - - - - - -
NBIPMDDE_01249 2.38e-127 - - - - - - - -
NBIPMDDE_01250 3.82e-128 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
NBIPMDDE_01251 1.37e-59 - - - S - - - NigD-like N-terminal OB domain
NBIPMDDE_01252 1.5e-277 lpxB 2.4.1.182 GT19 M ko:K00748 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NBIPMDDE_01253 6.65e-189 surE 3.1.3.5 - S ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
NBIPMDDE_01254 8.06e-176 rprY - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NBIPMDDE_01255 0.0 - 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
NBIPMDDE_01256 9.54e-204 - - - I - - - Acyltransferase
NBIPMDDE_01257 7.81e-238 - - - S - - - Hemolysin
NBIPMDDE_01258 6.27e-142 - - - S - - - Protein of unknown function (DUF3109)
NBIPMDDE_01259 3.54e-75 - - - S - - - tigr02436
NBIPMDDE_01260 0.0 gpmI 5.4.2.12 - G ko:K15633 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NBIPMDDE_01261 9.8e-167 - - - S ko:K07043 - ko00000 Protein of unknown function DUF45
NBIPMDDE_01262 2.1e-265 - - - EGP - - - Acetyl-coenzyme A transporter 1
NBIPMDDE_01263 0.0 hemN - - H - - - Belongs to the anaerobic coproporphyrinogen-III oxidase family
NBIPMDDE_01264 0.0 hemG 1.3.3.15, 1.3.3.4 - H ko:K00231 ko00860,ko01100,ko01110,map00860,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
NBIPMDDE_01265 3.27e-83 - - - S - - - Putative prokaryotic signal transducing protein
NBIPMDDE_01266 8.44e-34 - - - - - - - -
NBIPMDDE_01267 0.0 gdhA 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
NBIPMDDE_01268 0.0 - - - S - - - Phosphotransferase enzyme family
NBIPMDDE_01269 4.87e-183 hddC - - JM - - - COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon)
NBIPMDDE_01270 4.96e-133 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_01271 2.18e-244 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_01272 2.07e-281 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_01273 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_01274 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
NBIPMDDE_01275 2.64e-270 - - - S - - - Calcineurin-like phosphoesterase
NBIPMDDE_01276 1.73e-246 - - - S - - - Calcineurin-like phosphoesterase
NBIPMDDE_01277 0.0 ppsA - - GKT - - - Pyruvate phosphate dikinase, PEP pyruvate binding domain
NBIPMDDE_01278 0.0 gdh 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
NBIPMDDE_01279 1.55e-133 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
NBIPMDDE_01280 5.78e-72 - - - S - - - Domain of unknown function (DUF4286)
NBIPMDDE_01283 2.75e-100 - - - L - - - Belongs to the 'phage' integrase family
NBIPMDDE_01289 1.72e-82 - - - - - - - -
NBIPMDDE_01290 1.67e-69 - - - - - - - -
NBIPMDDE_01291 5.55e-32 - - - - - - - -
NBIPMDDE_01292 8.56e-35 - - - S - - - Psort location CytoplasmicMembrane, score
NBIPMDDE_01293 4.53e-49 - - - S - - - Protein of unknown function (DUF2829)
NBIPMDDE_01296 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NBIPMDDE_01297 0.0 trkA - - P ko:K03499 - ko00000,ko02000 Potassium transporter
NBIPMDDE_01298 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Potassium transporter
NBIPMDDE_01299 1.6e-116 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
NBIPMDDE_01300 0.0 sprA - - S - - - Motility related/secretion protein
NBIPMDDE_01301 1.11e-166 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NBIPMDDE_01302 1.38e-274 lpxK 2.7.1.130 - F ko:K00912 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
NBIPMDDE_01303 6.52e-248 thiL 2.7.4.16 - H ko:K00946 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
NBIPMDDE_01305 9.28e-34 - - - U - - - Relaxase/Mobilisation nuclease domain
NBIPMDDE_01307 1e-63 - - - KLT - - - Associated with various cellular activities
NBIPMDDE_01308 4.83e-53 - - - L - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_01310 5.66e-08 - 3.5.1.11 - S ko:K01434 ko00311,ko01130,map00311,map01130 ko00000,ko00001,ko01000,ko01002 penicillin amidase
NBIPMDDE_01311 1.07e-91 - - - E - - - N-dimethylarginine dimethylaminohydrolase
NBIPMDDE_01312 4.06e-05 psd 4.1.1.65 - I ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
NBIPMDDE_01315 8.55e-154 - - - S - - - Virulence protein RhuM family
NBIPMDDE_01316 2e-115 - - - L - - - Belongs to the 'phage' integrase family
NBIPMDDE_01318 2.6e-254 - - - CO - - - Antioxidant, AhpC TSA family
NBIPMDDE_01319 0.0 - - - V - - - MacB-like periplasmic core domain
NBIPMDDE_01320 0.0 - - - V - - - MacB-like periplasmic core domain
NBIPMDDE_01321 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
NBIPMDDE_01322 0.0 - - - V - - - MacB-like periplasmic core domain
NBIPMDDE_01323 6.19e-283 - - - M ko:K02005 - ko00000 Barrel-sandwich domain of CusB or HlyD membrane-fusion
NBIPMDDE_01324 0.0 - - - MU - - - Outer membrane efflux protein
NBIPMDDE_01325 0.0 - - - T - - - Sigma-54 interaction domain
NBIPMDDE_01326 8.69e-232 zraS_1 - - T - - - COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation
NBIPMDDE_01327 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
NBIPMDDE_01328 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
NBIPMDDE_01329 7.2e-166 mnmC - - S - - - S-adenosyl-L-methionine-dependent methyltransferase
NBIPMDDE_01330 8.22e-72 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
NBIPMDDE_01331 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA-directed DNA polymerase
NBIPMDDE_01332 2.74e-138 - - - M - - - Outer membrane protein beta-barrel domain
NBIPMDDE_01333 9.91e-109 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NBIPMDDE_01334 2.49e-82 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
NBIPMDDE_01335 4.07e-103 - - - S - - - Psort location OuterMembrane, score
NBIPMDDE_01336 6.8e-129 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_01337 8.57e-309 - - - S - - - CarboxypepD_reg-like domain
NBIPMDDE_01338 1.68e-127 - - - K ko:K03088 - ko00000,ko03021 ECF sigma factor
NBIPMDDE_01339 3.85e-198 - - - PT - - - FecR protein
NBIPMDDE_01340 0.0 - - - S - - - CarboxypepD_reg-like domain
NBIPMDDE_01342 1.74e-78 queD 4.1.2.50, 4.2.3.12 - H ko:K01737 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000,ko03016 6-pyruvoyl tetrahydropterin synthase
NBIPMDDE_01343 9.42e-137 queE 4.3.99.3 - H ko:K10026 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
NBIPMDDE_01344 0.0 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
NBIPMDDE_01345 0.0 - 4.2.2.5 PL8 N ko:K19049 - ko00000,ko01000 Polysaccharide lyase family 8, N terminal alpha-helical domain
NBIPMDDE_01346 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NBIPMDDE_01348 0.0 mrcA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 Penicillin-binding Protein
NBIPMDDE_01349 2.97e-226 - - - S - - - Belongs to the UPF0324 family
NBIPMDDE_01350 3.06e-206 cysL - - K - - - LysR substrate binding domain
NBIPMDDE_01353 0.0 - - - M - - - AsmA-like C-terminal region
NBIPMDDE_01354 4.36e-287 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NBIPMDDE_01355 1.52e-158 rfbC 5.1.3.13 - M ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
NBIPMDDE_01358 2.07e-195 - 2.5.1.105 - S ko:K06897 ko00790,map00790 ko00000,ko00001,ko01000 Metallo-beta-lactamase superfamily
NBIPMDDE_01359 0.0 - 3.2.1.20 GH31 M ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 C-terminal, oligomerisation
NBIPMDDE_01361 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
NBIPMDDE_01362 1.5e-170 hypB - - H ko:K22132 - ko00000,ko03016 COGs COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1
NBIPMDDE_01363 2.4e-153 lolD - - V ko:K09810 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner
NBIPMDDE_01364 0.0 - - - P ko:K03308 - ko00000 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
NBIPMDDE_01365 2.91e-180 - - - L - - - Helix-hairpin-helix motif
NBIPMDDE_01366 2.78e-221 - - - S - - - Endonuclease/Exonuclease/phosphatase family
NBIPMDDE_01367 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_01368 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_01369 2.14e-87 - - - S - - - Protein of unknown function (DUF3037)
NBIPMDDE_01370 3.84e-187 - - - DT - - - aminotransferase class I and II
NBIPMDDE_01372 5.9e-189 - - - KT - - - LytTr DNA-binding domain
NBIPMDDE_01373 4.33e-185 - - - S - - - Cell wall-active antibiotics response 4TMS YvqF
NBIPMDDE_01374 0.0 - - - S - - - Oxidoreductase family, C-terminal alpha/beta domain
NBIPMDDE_01375 5.38e-234 - - - S - - - Methane oxygenase PmoA
NBIPMDDE_01376 1.5e-122 - - - S - - - Putative auto-transporter adhesin, head GIN domain
NBIPMDDE_01377 5.51e-156 - - - S - - - Putative auto-transporter adhesin, head GIN domain
NBIPMDDE_01378 1.6e-249 - 5.1.3.2 - GM ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 NAD dependent epimerase dehydratase family protein
NBIPMDDE_01379 3.23e-37 znuC - - P ko:K09817 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
NBIPMDDE_01380 4.47e-178 znuC - - P ko:K09817 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
NBIPMDDE_01381 9.56e-216 mntA - - P ko:K09815,ko:K11707 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Zinc-uptake complex component A periplasmic
NBIPMDDE_01383 3.82e-258 - - - M - - - peptidase S41
NBIPMDDE_01384 2.53e-208 - - - S - - - Protein of unknown function (DUF3316)
NBIPMDDE_01385 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Belongs to the type II topoisomerase GyrA ParC subunit family
NBIPMDDE_01386 8.78e-08 - - - P - - - TonB-dependent receptor
NBIPMDDE_01387 1.1e-114 arsC 1.20.4.1 - T ko:K03741 - ko00000,ko01000 Low molecular weight phosphatase family
NBIPMDDE_01388 3.18e-44 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Glutamine amidotransferase domain
NBIPMDDE_01389 0.0 - - - S - - - COG NOG38840 non supervised orthologous group
NBIPMDDE_01390 9.78e-185 - - - S - - - Domain of unknown function (DUF4469) with IG-like fold
NBIPMDDE_01391 6.01e-80 - - - S - - - Cupin domain
NBIPMDDE_01392 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Beta galactosidase small chain
NBIPMDDE_01393 0.0 - - - G - - - Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
NBIPMDDE_01394 4.88e-197 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NBIPMDDE_01395 2.65e-310 dapL 2.6.1.83 - E ko:K10206 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate
NBIPMDDE_01396 0.0 glnA 6.3.1.2 - S ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Belongs to the glutamine synthetase family
NBIPMDDE_01398 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NBIPMDDE_01399 0.0 nagA - - S - - - hydrolase activity, acting on glycosyl bonds
NBIPMDDE_01400 4.49e-293 rhlE 3.6.4.13 - L ko:K11927 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Belongs to the DEAD box helicase family
NBIPMDDE_01401 0.0 recQ3 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 RQC
NBIPMDDE_01402 2.55e-250 - - - S - - - L,D-transpeptidase catalytic domain
NBIPMDDE_01403 8.84e-162 - - - S - - - L,D-transpeptidase catalytic domain
NBIPMDDE_01404 3.48e-140 - 4.1.3.38 - EH ko:K02619 ko00790,map00790 ko00000,ko00001,ko01000 Amino-transferase class IV
NBIPMDDE_01405 1.03e-239 pabB 2.6.1.85 - EH ko:K01665 ko00790,map00790 ko00000,ko00001,ko01000 component I
NBIPMDDE_01406 1.37e-216 pabB 3.5.1.53 - S ko:K12251 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 Hydrolase, carbon-nitrogen family
NBIPMDDE_01407 2.21e-256 aguA 3.5.3.12 - E ko:K10536 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 Belongs to the agmatine deiminase family
NBIPMDDE_01408 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_01410 1.14e-315 tldD3 - - S ko:K03592 - ko00000,ko01002 Putative modulator of DNA gyrase
NBIPMDDE_01411 1.88e-316 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
NBIPMDDE_01412 0.0 covS - - T - - - HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NBIPMDDE_01413 3.85e-239 kdpD 2.7.13.3 - T ko:K07646 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Osmosensitive K+ channel His kinase sensor domain
NBIPMDDE_01414 3.69e-183 - - - S - - - non supervised orthologous group
NBIPMDDE_01415 2.26e-130 kdpC 3.6.3.12 - P ko:K01548 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
NBIPMDDE_01416 0.0 kdpB 3.6.3.12 - P ko:K01547 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
NBIPMDDE_01417 0.0 kdpA 3.6.3.12 - P ko:K01546 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
NBIPMDDE_01419 1.52e-103 - 3.4.21.53 - T ko:K01338 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 phosphorelay signal transduction system
NBIPMDDE_01420 1.11e-49 - - - T ko:K01991,ko:K03413 ko02020,ko02026,ko02030,map02020,map02026,map02030 ko00000,ko00001,ko00002,ko02000,ko02022,ko02035 phosphorelay signal transduction system
NBIPMDDE_01424 2.07e-67 otsB 2.4.1.15, 3.1.3.12 GT20 G ko:K16055 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000,ko01003 Trehalose-phosphatase
NBIPMDDE_01425 6.57e-21 - - - - - - - -
NBIPMDDE_01427 2.41e-262 - - - L - - - Belongs to the 'phage' integrase family
NBIPMDDE_01428 1.67e-309 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
NBIPMDDE_01429 7.92e-20 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
NBIPMDDE_01430 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
NBIPMDDE_01431 7.35e-176 tatC - - U ko:K03118 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NBIPMDDE_01432 4.7e-35 tatA - - U ko:K03116 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
NBIPMDDE_01433 7.54e-133 - - - S - - - NADPH-dependent FMN reductase
NBIPMDDE_01434 1.23e-224 ytbE - - S - - - Aldo/keto reductase family
NBIPMDDE_01435 9.01e-178 - - - IQ - - - KR domain
NBIPMDDE_01436 2.18e-138 - - - GM - - - NmrA-like family
NBIPMDDE_01437 1.42e-248 - - - C - - - Aldo/keto reductase family
NBIPMDDE_01438 1.32e-136 - - - C - - - Flavodoxin
NBIPMDDE_01439 5.72e-190 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
NBIPMDDE_01440 1.4e-220 - - - S - - - Flavin reductase like domain
NBIPMDDE_01441 6.04e-52 - - - V ko:K06147 - ko00000,ko02000 hmm pf03412
NBIPMDDE_01442 1.99e-71 - - - - - - - -
NBIPMDDE_01443 5e-81 - - - L ko:K07484 - ko00000 PFAM IS66 Orf2 like protein
NBIPMDDE_01445 7.42e-106 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
NBIPMDDE_01447 4.01e-29 - - - S - - - Tetratricopeptide repeat
NBIPMDDE_01449 5.56e-285 - - - S - - - Tetratricopeptide repeat
NBIPMDDE_01450 5.41e-73 - - - I - - - Biotin-requiring enzyme
NBIPMDDE_01451 0.0 - - - I - - - COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
NBIPMDDE_01452 9.69e-128 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NBIPMDDE_01453 1.13e-98 ruvX - - L ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NBIPMDDE_01454 0.0 wcaJ_2 2.7.8.6 - M ko:K00996,ko:K03606 ko05111,map05111 ko00000,ko00001,ko01000,ko01005 CoA-binding domain
NBIPMDDE_01455 2.8e-281 - - - M - - - membrane
NBIPMDDE_01456 4.32e-280 gmd 4.2.1.47 - M ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
NBIPMDDE_01457 1.85e-265 fcl 1.1.1.271 - GM ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
NBIPMDDE_01458 3.21e-212 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NBIPMDDE_01460 6e-130 - - - S - - - Short repeat of unknown function (DUF308)
NBIPMDDE_01461 1.42e-247 - - - S - - - Domain of unknown function (DUF4249)
NBIPMDDE_01462 0.0 - - - P - - - TonB-dependent receptor plug domain
NBIPMDDE_01463 7.84e-208 - - - PT - - - Fe2 -dicitrate sensor, membrane component
NBIPMDDE_01464 1.74e-293 trpB 4.2.1.20, 5.3.1.24 - E ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
NBIPMDDE_01465 0.0 trpE 4.1.3.27 - EH ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Anthranilate synthase component I, N terminal region
NBIPMDDE_01466 9.31e-137 trpG 2.6.1.85, 4.1.3.27 - EH ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Glutamine amidotransferase class-I
NBIPMDDE_01467 2.15e-237 trpD 2.4.2.18, 4.1.3.27 - E ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NBIPMDDE_01468 8.82e-186 trpC 4.1.1.48 - E ko:K01609 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpC family
NBIPMDDE_01469 2.33e-164 trpF 5.3.1.24 - E ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpF family
NBIPMDDE_01470 2.13e-182 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
NBIPMDDE_01471 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
NBIPMDDE_01472 0.0 - - - CO - - - Thioredoxin-like
NBIPMDDE_01473 4.95e-216 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RluA family
NBIPMDDE_01474 0.0 - 1.8.1.8 - CO ko:K04084 - ko00000,ko01000,ko03110 Thiol disulfide interchange protein
NBIPMDDE_01475 1.1e-197 mazG 3.6.1.66 - S ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
NBIPMDDE_01476 1.62e-105 - - - S - - - COG NOG28735 non supervised orthologous group
NBIPMDDE_01477 5.64e-84 - - - S - - - COG NOG23405 non supervised orthologous group
NBIPMDDE_01478 2.13e-130 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
NBIPMDDE_01480 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
NBIPMDDE_01481 1.18e-55 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NBIPMDDE_01482 0.0 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
NBIPMDDE_01483 1.13e-154 - - - S ko:K06973 - ko00000 Putative neutral zinc metallopeptidase
NBIPMDDE_01484 1.05e-314 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NBIPMDDE_01485 4.26e-113 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
NBIPMDDE_01486 4.84e-160 - - - L - - - DNA alkylation repair enzyme
NBIPMDDE_01487 0.0 - 3.4.14.4 - S ko:K01277 - ko00000,ko01000,ko01002 Peptidase family M49
NBIPMDDE_01488 0.0 - 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 peptidase M24
NBIPMDDE_01489 6.53e-102 dapH - - S - - - acetyltransferase
NBIPMDDE_01490 1.57e-156 - 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD-hyrolase-like
NBIPMDDE_01491 2.65e-144 - - - - - - - -
NBIPMDDE_01492 4.33e-62 - - - S - - - Protein of unknown function (DUF2089)
NBIPMDDE_01493 0.0 pepC 3.4.22.40 - M ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
NBIPMDDE_01494 0.0 - - - E - - - Starch-binding associating with outer membrane
NBIPMDDE_01495 0.0 - - - P - - - Sulfatase
NBIPMDDE_01496 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NBIPMDDE_01497 0.0 - 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
NBIPMDDE_01498 0.0 - - - G - - - Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
NBIPMDDE_01499 0.0 - - - G - - - alpha-L-rhamnosidase
NBIPMDDE_01500 0.0 - - - GM ko:K21572 - ko00000,ko02000 COG NOG26302 non supervised orthologous group
NBIPMDDE_01501 0.0 - - - P - - - TonB-dependent receptor plug domain
NBIPMDDE_01502 2.65e-108 - - - S - - - Domain of unknown function (DUF4252)
NBIPMDDE_01503 3.33e-88 - - - - - - - -
NBIPMDDE_01504 4.18e-118 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
NBIPMDDE_01505 2.34e-102 - - - S - - - Domain of unknown function (DUF4252)
NBIPMDDE_01506 1.69e-201 - - - EG - - - EamA-like transporter family
NBIPMDDE_01507 1.11e-282 - - - P - - - Major Facilitator Superfamily
NBIPMDDE_01508 0.0 gadB 4.1.1.15, 4.1.2.27 - E ko:K01580,ko:K01634 ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940 ko00000,ko00001,ko00002,ko01000 Belongs to the group II decarboxylase family
NBIPMDDE_01509 5.02e-230 glsA 3.5.1.2 - E ko:K01425 ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230 ko00000,ko00001,ko01000 Belongs to the glutaminase family
NBIPMDDE_01510 1.74e-177 - - - T - - - Ion channel
NBIPMDDE_01511 0.0 gadC - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 glutamate gamma-aminobutyrate antiporter
NBIPMDDE_01512 5.22e-75 - - - - - - - -
NBIPMDDE_01515 1.79e-108 - - - S - - - Pentapeptide repeats (8 copies)
NBIPMDDE_01516 2.48e-61 - - - S ko:K06975 - ko00000 GCN5-related N-acetyl-transferase
NBIPMDDE_01517 0.0 - - - - - - - -
NBIPMDDE_01518 2.93e-107 nodN - - I - - - MaoC like domain
NBIPMDDE_01519 8.43e-148 - - - O - - - lipoprotein NlpE involved in copper resistance
NBIPMDDE_01520 2.32e-185 - - - L - - - DNA metabolism protein
NBIPMDDE_01521 2.75e-305 - - - S - - - Radical SAM
NBIPMDDE_01522 9e-255 - 4.1.1.81 - E ko:K04720 ko00860,map00860 ko00000,ko00001,ko01000 Aminotransferase
NBIPMDDE_01523 0.0 nagA - - G - - - hydrolase, family 3
NBIPMDDE_01524 2.42e-193 - - - S - - - NIPSNAP
NBIPMDDE_01525 3.03e-316 - - - S - - - alpha beta
NBIPMDDE_01526 1.35e-73 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NBIPMDDE_01527 0.0 - - - H - - - NAD metabolism ATPase kinase
NBIPMDDE_01528 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NBIPMDDE_01529 1.16e-207 - - - K - - - AraC family transcriptional regulator
NBIPMDDE_01530 7.61e-144 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Hexapeptide repeat of succinyl-transferase
NBIPMDDE_01531 3.25e-106 - - - S - - - COG NOG19145 non supervised orthologous group
NBIPMDDE_01532 0.0 cca 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 tRNA nucleotidyltransferase
NBIPMDDE_01533 1.5e-192 - - - - - - - -
NBIPMDDE_01535 0.0 hppA 3.6.1.1 - C ko:K15987 ko00190,map00190 ko00000,ko00001,ko01000 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane
NBIPMDDE_01536 3.69e-200 - - - S ko:K07001 - ko00000 Phospholipase
NBIPMDDE_01537 0.0 amyA2 - - G - - - Alpha amylase, catalytic domain protein
NBIPMDDE_01538 7.06e-221 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NBIPMDDE_01539 6.27e-274 trmU 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
NBIPMDDE_01541 5.62e-252 mtnA 5.3.1.23 - E ko:K08963 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
NBIPMDDE_01542 8.55e-33 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
NBIPMDDE_01543 3.22e-216 xerC - - L ko:K03733 - ko00000,ko03036 Belongs to the 'phage' integrase family
NBIPMDDE_01544 7.84e-61 raiA - - J ko:K05808 - ko00000,ko03009 Ribosomal subunit interface protein
NBIPMDDE_01549 7.06e-292 tuf - - J ko:K02358 - ko00000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NBIPMDDE_01551 5.7e-36 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
NBIPMDDE_01552 2.49e-123 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
NBIPMDDE_01553 1.04e-99 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NBIPMDDE_01554 1.01e-159 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
NBIPMDDE_01555 1.56e-115 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NBIPMDDE_01556 6.3e-61 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
NBIPMDDE_01557 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NBIPMDDE_01558 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NBIPMDDE_01559 1.22e-217 - - - S - - - Endonuclease/Exonuclease/phosphatase family
NBIPMDDE_01560 2.25e-207 - - - K - - - helix_turn_helix, arabinose operon control protein
NBIPMDDE_01561 7.41e-65 - - - T - - - Protein of unknown function (DUF3467)
NBIPMDDE_01562 2.26e-59 - - - S - - - COG NOG16854 non supervised orthologous group
NBIPMDDE_01564 1.34e-131 ywqN - - S - - - NADPH-dependent FMN reductase
NBIPMDDE_01566 5.65e-31 - - - S - - - Transglycosylase associated protein
NBIPMDDE_01567 3.92e-135 lutC - - S ko:K00782 - ko00000 LUD domain
NBIPMDDE_01568 0.0 - - - C ko:K18929 - ko00000 4Fe-4S ferredoxin
NBIPMDDE_01569 4.01e-182 - - - C ko:K18928 - ko00000 Fe-S oxidoreductase
NBIPMDDE_01570 0.0 carB 6.3.5.5 - EF ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)
NBIPMDDE_01571 1.83e-286 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
NBIPMDDE_01572 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 amidophosphoribosyltransferase
NBIPMDDE_01573 1.44e-128 - - - J - - - Acetyltransferase (GNAT) domain
NBIPMDDE_01574 0.0 - 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 DNA helicase
NBIPMDDE_01575 0.0 - - - T - - - Histidine kinase-like ATPases
NBIPMDDE_01576 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 GXGXG motif
NBIPMDDE_01577 0.0 gltD 1.4.1.13, 1.4.1.14 - C ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NBIPMDDE_01578 1.68e-109 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_01579 0.0 thiC 4.1.99.17 - H ko:K03147 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
NBIPMDDE_01580 5.27e-182 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
NBIPMDDE_01581 3.48e-146 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Thiamine monophosphate synthase
NBIPMDDE_01582 7.19e-197 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
NBIPMDDE_01583 0.0 - - - M - - - CarboxypepD_reg-like domain
NBIPMDDE_01584 0.0 - - - M - - - Surface antigen
NBIPMDDE_01585 2.81e-104 - - - S - - - COG NOG28134 non supervised orthologous group
NBIPMDDE_01587 8.2e-113 - - - O - - - Thioredoxin-like
NBIPMDDE_01589 7.07e-27 - - - O ko:K04655 - ko00000 AIR synthase related protein, N-terminal domain
NBIPMDDE_01590 0.0 - - - O ko:K04656 - ko00000 Acylphosphatase
NBIPMDDE_01591 3.13e-14 hypA - - S ko:K04651 - ko00000,ko03110 Probably plays a role in a hydrogenase nickel cofactor insertion step
NBIPMDDE_01592 1.1e-115 hypB - - KO ko:K04652 - ko00000,ko03110 CobW/HypB/UreG, nucleotide-binding domain
NBIPMDDE_01593 0.0 - - - C ko:K09181 - ko00000 CoA ligase
NBIPMDDE_01595 0.0 ppdK 2.7.9.1 - G ko:K01006 ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the PEP-utilizing enzyme family
NBIPMDDE_01596 3.01e-84 - - - K - - - LytTr DNA-binding domain
NBIPMDDE_01597 3.72e-159 - - - T - - - Inner membrane component of T3SS, cytoplasmic domain
NBIPMDDE_01599 1.64e-119 - - - T - - - FHA domain
NBIPMDDE_01600 7.8e-195 - 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Serine/threonine phosphatases, family 2C, catalytic domain
NBIPMDDE_01601 0.0 - 2.7.11.1 - KLT ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
NBIPMDDE_01602 1.44e-237 - - - S - - - COG0790 FOG TPR repeat, SEL1 subfamily
NBIPMDDE_01604 3.55e-296 ybdG_2 - - M ko:K16053 - ko00000,ko02000 Mechanosensitive ion channel
NBIPMDDE_01605 6.35e-276 ybdG_1 - - M ko:K16053 - ko00000,ko02000 Mechanosensitive ion channel
NBIPMDDE_01606 0.0 - - - S - - - Insulinase (Peptidase family M16)
NBIPMDDE_01607 9.91e-109 - - - S - - - Domain of unknown function (DUF4268)
NBIPMDDE_01608 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Peptidase family M1 domain
NBIPMDDE_01609 3.82e-194 hisG 2.4.2.17 - F ko:K00765 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
NBIPMDDE_01610 1.46e-299 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NBIPMDDE_01611 7.94e-249 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NBIPMDDE_01612 1.39e-281 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis bifunctional protein HisB
NBIPMDDE_01613 3.83e-281 - - - G - - - Glycosyl hydrolases family 43
NBIPMDDE_01614 2.96e-92 - - - S - - - Lipocalin-like domain
NBIPMDDE_01615 6.79e-186 - - - - - - - -
NBIPMDDE_01616 6.08e-112 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NBIPMDDE_01617 0.0 yhgF - - K ko:K06959 - ko00000 Tex-like protein N-terminal domain
NBIPMDDE_01618 0.0 - - - P ko:K02050 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
NBIPMDDE_01619 4.33e-200 - - - P ko:K02051 - ko00000,ko00002,ko02000 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NBIPMDDE_01620 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Belongs to the ClpA ClpB family
NBIPMDDE_01621 9.73e-197 - - - L - - - Phage integrase SAM-like domain
NBIPMDDE_01622 9.64e-218 - - - L - - - Belongs to the 'phage' integrase family
NBIPMDDE_01623 4.41e-31 - - - S - - - Helix-turn-helix domain
NBIPMDDE_01624 3.08e-28 - - - K - - - COG NOG34759 non supervised orthologous group
NBIPMDDE_01626 1.08e-303 - - - H - - - TonB-dependent receptor
NBIPMDDE_01627 1.87e-199 - - - S - - - amine dehydrogenase activity
NBIPMDDE_01628 2.21e-193 - - - S - - - COG NOG23387 non supervised orthologous group
NBIPMDDE_01629 3.17e-214 - - - T - - - Domain of unknown function (DUF5074)
NBIPMDDE_01630 2.38e-50 - - - T - - - Domain of unknown function (DUF5074)
NBIPMDDE_01631 4.73e-156 - - - T - - - Domain of unknown function (DUF5074)
NBIPMDDE_01633 2.74e-108 - 3.1.3.97 - S ko:K07053 - ko00000,ko01000 Domain of unknown function
NBIPMDDE_01634 2.56e-89 - - - D - - - COG NOG26689 non supervised orthologous group
NBIPMDDE_01635 2.51e-22 - - - S - - - Protein of unknown function (DUF3408)
NBIPMDDE_01636 7.98e-80 - - - - - - - -
NBIPMDDE_01637 2.99e-120 - - - K - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_01638 0.000198 - - - S - - - Uncharacterised protein family (UPF0158)
NBIPMDDE_01639 1.37e-184 - - - S - - - Glycosyl Hydrolase Family 88
NBIPMDDE_01640 1.83e-297 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
NBIPMDDE_01641 6.63e-95 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_01642 4.39e-176 znuB - - P ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family protein
NBIPMDDE_01643 0.0 - - - M - - - Membrane
NBIPMDDE_01644 0.0 uxaC 5.3.1.12 - G ko:K01812 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Glucuronate isomerase
NBIPMDDE_01645 8.42e-163 eda 4.1.2.14, 4.1.3.42 - G ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 KDPG and KHG aldolase
NBIPMDDE_01646 1.56e-257 - 2.7.1.45 - G ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 pfkB family carbohydrate kinase
NBIPMDDE_01647 0.0 - 3.1.6.6 - P ko:K01133 - ko00000,ko01000 COG COG3119 Arylsulfatase A and related enzymes
NBIPMDDE_01648 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65, N-terminal domain
NBIPMDDE_01649 0.0 - - - K ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_01650 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_01651 6.42e-237 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_01652 1.74e-125 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_01653 0.0 - - - T - - - COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
NBIPMDDE_01654 1.35e-239 - - - T - - - Histidine kinase
NBIPMDDE_01655 0.0 lytB - - D ko:K06381 - ko00000 Stage II sporulation protein
NBIPMDDE_01656 0.0 - - - S - - - Peptide transporter
NBIPMDDE_01657 3.72e-145 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NBIPMDDE_01658 3.05e-281 wbbL - - S ko:K07011 - ko00000 Glycosyl transferase family group 2
NBIPMDDE_01659 1.34e-130 speG 2.3.1.57 - J ko:K00657 ko00330,ko01100,ko04216,map00330,map01100,map04216 ko00000,ko00001,ko00002,ko01000 Acetyltransferase (GNAT) domain
NBIPMDDE_01660 3.22e-146 - - - K ko:K07735 - ko00000,ko03000 Uncharacterized ACR, COG1678
NBIPMDDE_01661 0.0 alaC - - E - - - Aminotransferase
NBIPMDDE_01665 3.11e-84 - - - O - - - Thioredoxin
NBIPMDDE_01666 3.87e-162 sodB 1.15.1.1 - C ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 ko00000,ko00001,ko01000 Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NBIPMDDE_01667 8.93e-76 - - - - - - - -
NBIPMDDE_01668 0.0 - - - G - - - Domain of unknown function (DUF5127)
NBIPMDDE_01669 0.0 eptA - - S - - - Domain of unknown function (DUF1705)
NBIPMDDE_01670 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
NBIPMDDE_01671 6.23e-288 - - - S ko:K07148 - ko00000 Protein of unknown function (DUF418)
NBIPMDDE_01672 0.0 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
NBIPMDDE_01673 0.0 - 2.3.1.54, 4.1.1.83 - C ko:K00656,ko:K18427 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
NBIPMDDE_01674 1.83e-297 ydiI 3.1.2.28 - Q ko:K19222 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Thioesterase superfamily
NBIPMDDE_01675 1.62e-279 entC 5.4.4.2 - HQ ko:K02361,ko:K02552 ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Isochorismate synthase
NBIPMDDE_01676 4.77e-219 cysK 2.5.1.47 - E ko:K01738,ko:K12339 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
NBIPMDDE_01677 6.38e-233 - - - S - - - Trehalose utilisation
NBIPMDDE_01679 2.41e-218 - - - - - - - -
NBIPMDDE_01680 0.0 - - - P ko:K03281 - ko00000 Voltage gated chloride channel
NBIPMDDE_01681 7.66e-153 yhhQ - - U ko:K09125 - ko00000 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
NBIPMDDE_01682 5.74e-155 yihX 3.1.3.10 - S ko:K07025,ko:K20866 ko00010,ko01120,map00010,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
NBIPMDDE_01683 0.0 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
NBIPMDDE_01684 7.87e-172 ydcV - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
NBIPMDDE_01685 4.62e-182 - - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
NBIPMDDE_01686 0.0 potA 3.6.3.29, 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K02017,ko:K10112,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
NBIPMDDE_01687 7.09e-273 pyrP - - F ko:K02824 - ko00000,ko02000 Uracil transporter
NBIPMDDE_01688 0.0 lacZ_2 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Domain of unknown function (DUF4982)
NBIPMDDE_01689 1.12e-309 - - - S - - - Glycosyl Hydrolase Family 88
NBIPMDDE_01690 0.0 - - - GM - - - SusD family
NBIPMDDE_01691 0.0 - - - P - - - CarboxypepD_reg-like domain
NBIPMDDE_01692 1.85e-26 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L34
NBIPMDDE_01693 3.85e-144 pknB 2.7.11.1, 6.3.2.4 - S ko:K01921,ko:K08884,ko:K12132 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01001,ko01011 PASTA domain protein
NBIPMDDE_01694 2.44e-267 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
NBIPMDDE_01695 5.27e-236 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
NBIPMDDE_01696 6.88e-278 - - - I - - - Acyltransferase
NBIPMDDE_01697 0.0 - - - T - - - Y_Y_Y domain
NBIPMDDE_01698 3.63e-288 - - - EGP - - - MFS_1 like family
NBIPMDDE_01699 1.98e-302 rocD 2.6.1.13 - E ko:K00819 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 ko00000,ko00001,ko01000,ko01007 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NBIPMDDE_01700 9.62e-216 rocF 3.5.3.1, 3.5.3.11 - E ko:K01476,ko:K01480 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 ko00000,ko00001,ko00002,ko01000 Belongs to the arginase family
NBIPMDDE_01701 0.0 - - - M - - - Outer membrane protein, OMP85 family
NBIPMDDE_01702 0.0 - - - M - - - TamB, inner membrane protein subunit of TAM complex
NBIPMDDE_01703 2.32e-189 suhB 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Inositol monophosphatase family
NBIPMDDE_01704 0.0 - - - N - - - Bacterial Ig-like domain 2
NBIPMDDE_01705 0.0 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_01706 7.64e-131 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
NBIPMDDE_01707 6.93e-88 gloA 4.4.1.5 - E ko:K01759,ko:K03827 ko00620,map00620 ko00000,ko00001,ko01000 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NBIPMDDE_01708 0.0 sufD - - O ko:K09015 - ko00000 FeS assembly protein SufD
NBIPMDDE_01709 2.04e-173 sufC - - O ko:K09013 - ko00000,ko02000 Part of SUF system involved in inserting iron-sulfur clusters into proteins
NBIPMDDE_01710 0.0 sufB - - O ko:K09014 - ko00000 Cysteine desulfurase
NBIPMDDE_01711 9.6e-106 - - - S ko:K03558 - ko00000 Colicin V production protein
NBIPMDDE_01712 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NBIPMDDE_01713 3.85e-297 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
NBIPMDDE_01714 7.14e-105 rimP - - S ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
NBIPMDDE_01715 0.0 - - - P ko:K02014 - ko00000,ko02000 TonB-dependent Receptor Plug Domain
NBIPMDDE_01716 2.94e-143 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
NBIPMDDE_01717 1.02e-149 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamin pyrophosphokinase, catalytic domain
NBIPMDDE_01719 0.0 - - - M - - - Domain of unknown function, B. Theta Gene description (DUF3868)
NBIPMDDE_01720 1.6e-138 - - - M - - - Protein of unknown function (DUF3575)
NBIPMDDE_01721 2.11e-89 - - - L - - - regulation of translation
NBIPMDDE_01722 0.0 - - - S - - - COG NOG26639 non supervised orthologous group
NBIPMDDE_01723 7.39e-190 - - - M ko:K03442 - ko00000,ko02000 mechanosensitive ion channel
NBIPMDDE_01725 4.17e-113 - - - S - - - Tetratricopeptide repeat
NBIPMDDE_01726 1.24e-261 leuB 1.1.1.85 - C ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
NBIPMDDE_01727 6.21e-105 mgsA 4.2.3.3 - G ko:K01734 ko00640,ko01120,map00640,map01120 ko00000,ko00001,ko01000 methylglyoxal synthase
NBIPMDDE_01728 0.0 leuA_1 2.3.1.182 - E ko:K09011 ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the alpha-IPM synthase homocitrate synthase family
NBIPMDDE_01729 4.58e-140 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NBIPMDDE_01730 0.0 leuC 4.2.1.33, 4.2.1.35 - H ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NBIPMDDE_01731 0.0 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NBIPMDDE_01733 2.78e-292 - - - S - - - Calcineurin-like phosphoesterase superfamily domain
NBIPMDDE_01734 2.13e-255 ilvC 1.1.1.86 - E ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Ketol-acid reductoisomerase
NBIPMDDE_01735 2.36e-181 - 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
NBIPMDDE_01736 4.09e-119 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 synthase small subunit
NBIPMDDE_01737 0.0 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Acetolactate synthase, large subunit
NBIPMDDE_01738 0.0 ilvD 4.2.1.9 - EG ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
NBIPMDDE_01739 2.47e-314 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase class I and II
NBIPMDDE_01740 3.15e-116 slyD 5.2.1.8 - O ko:K03775 - ko00000,ko01000,ko03110 Peptidyl-prolyl cis-trans isomerase
NBIPMDDE_01741 3.45e-258 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NBIPMDDE_01742 1.28e-107 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NBIPMDDE_01743 1.64e-78 - - - S - - - Domain of unknown function (DUF4783)
NBIPMDDE_01744 1.51e-201 nadC 2.4.2.19 - H ko:K00767 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NadC ModD family
NBIPMDDE_01745 1.76e-259 pdxA 1.1.1.262 - C ko:K00097 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the PdxA family
NBIPMDDE_01746 1.19e-107 aepX 2.7.7.15, 2.7.7.39, 5.4.2.9 - IM ko:K00968,ko:K00980,ko:K01841 ko00440,ko00564,ko01100,ko01120,ko01130,ko05231,map00440,map00564,map01100,map01120,map01130,map05231 ko00000,ko00001,ko00002,ko01000 Glycerol-3-phosphate cytidylyltransferase
NBIPMDDE_01747 1.5e-171 - 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Dehydrogenase
NBIPMDDE_01748 7.01e-212 - - - I - - - CDP-alcohol phosphatidyltransferase
NBIPMDDE_01749 2.96e-203 - - - I - - - Phosphate acyltransferases
NBIPMDDE_01750 2e-266 fhlA - - K - - - ATPase (AAA
NBIPMDDE_01751 1.7e-107 lptE - - S - - - Lipopolysaccharide-assembly
NBIPMDDE_01752 3.14e-179 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_01753 5.75e-72 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
NBIPMDDE_01754 4.26e-69 - - - S - - - Domain of unknown function (DUF4491)
NBIPMDDE_01755 2.56e-41 - - - - - - - -
NBIPMDDE_01756 8.44e-71 - - - - - - - -
NBIPMDDE_01759 7.39e-113 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
NBIPMDDE_01760 5.86e-157 - - - S - - - Tetratricopeptide repeat
NBIPMDDE_01761 2.08e-263 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NBIPMDDE_01762 1.17e-61 - - - S - - - Protein of unknown function (DUF721)
NBIPMDDE_01763 4.99e-88 - - - S - - - Protein of unknown function (DUF1232)
NBIPMDDE_01764 2.6e-107 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NBIPMDDE_01765 0.0 ctp 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
NBIPMDDE_01766 1.18e-99 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 deaminase
NBIPMDDE_01767 0.0 dcp 3.4.15.5, 3.4.24.70 - E ko:K01284,ko:K01414 - ko00000,ko01000,ko01002 peptidase
NBIPMDDE_01768 0.0 - - - G - - - Glycogen debranching enzyme
NBIPMDDE_01769 0.0 gmhA 2.4.1.346 GT4 M ko:K13668 - ko00000,ko01000,ko01003 Starch synthase catalytic domain
NBIPMDDE_01770 0.0 amyA 3.2.1.1 GH57 G ko:K07405 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolase family 57
NBIPMDDE_01771 1.45e-280 - - - S - - - 6-bladed beta-propeller
NBIPMDDE_01772 0.0 - 1.8.5.4 - S ko:K17218 ko00920,map00920 ko00000,ko00001,ko01000 Pyridine nucleotide-disulphide oxidoreductase
NBIPMDDE_01773 0.0 - - - M - - - helix_turn_helix, Lux Regulon
NBIPMDDE_01774 0.0 carB 6.3.5.5 - EF ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
NBIPMDDE_01775 0.0 - - - S - - - Heparinase II/III-like protein
NBIPMDDE_01776 0.0 - - - M - - - O-Antigen ligase
NBIPMDDE_01777 8.65e-236 - - - V - - - AcrB/AcrD/AcrF family
NBIPMDDE_01778 0.0 - - - V - - - AcrB/AcrD/AcrF family
NBIPMDDE_01779 0.0 - - - MU - - - Outer membrane efflux protein
NBIPMDDE_01780 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_01781 1.26e-246 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_01782 0.0 - - - P - - - Domain of unknown function (DUF4976)
NBIPMDDE_01783 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
NBIPMDDE_01784 4.89e-195 - - - S - - - Outer membrane protein beta-barrel domain
NBIPMDDE_01785 5.38e-273 - - - S - - - Putative carbohydrate metabolism domain
NBIPMDDE_01786 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
NBIPMDDE_01787 2.73e-61 - - - T - - - STAS domain
NBIPMDDE_01788 3.2e-91 - 2.7.11.1 - T ko:K04757 - ko00000,ko01000,ko01001,ko03021 Histidine kinase-like ATPase domain
NBIPMDDE_01789 5.04e-258 - - - T - - - Histidine kinase-like ATPases
NBIPMDDE_01790 2.96e-179 - - - T - - - GHKL domain
NBIPMDDE_01791 4.65e-277 - 3.1.3.3 - T ko:K07315 - ko00000,ko01000,ko03021 Sigma factor PP2C-like phosphatases
NBIPMDDE_01793 0.0 - - - V - - - ABC-2 type transporter
NBIPMDDE_01794 1.88e-111 - - - L - - - Belongs to the 'phage' integrase family
NBIPMDDE_01796 1.7e-101 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_01797 1.69e-248 - - - - - - - -
NBIPMDDE_01798 5.56e-212 - - - G - - - Xylose isomerase-like TIM barrel
NBIPMDDE_01799 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
NBIPMDDE_01801 0.0 - - - S - - - Heparinase II/III-like protein
NBIPMDDE_01802 3.03e-297 - - - O - - - Glycosyl Hydrolase Family 88
NBIPMDDE_01803 4.11e-222 - - - S - - - Metalloenzyme superfamily
NBIPMDDE_01804 0.0 - - - T - - - helix_turn_helix, arabinose operon control protein
NBIPMDDE_01805 2.9e-231 - - - P ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NBIPMDDE_01806 8.36e-252 - 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding protein
NBIPMDDE_01807 0.0 - - - V - - - Multidrug transporter MatE
NBIPMDDE_01808 1.23e-112 - - - S - - - Domain of unknown function (DUF4251)
NBIPMDDE_01809 4.32e-87 - - - O - - - Chaperonin 10 Kd subunit
NBIPMDDE_01810 1.14e-186 gltD 1.18.1.2, 1.19.1.1 - C ko:K00528 - ko00000,ko01000 Ferredoxin-NADP reductase
NBIPMDDE_01811 0.0 gltA 1.3.1.1, 1.4.1.13, 1.4.1.14 - E ko:K00266,ko:K17722 ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation
NBIPMDDE_01812 0.0 - - - P ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_01813 0.0 - - - P - - - CarboxypepD_reg-like domain
NBIPMDDE_01814 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
NBIPMDDE_01815 0.0 - - - S ko:K09955 - ko00000 Beta-L-arabinofuranosidase, GH127
NBIPMDDE_01818 6.75e-138 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
NBIPMDDE_01819 3.91e-244 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_01820 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_01821 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_01822 0.0 algI - - M - - - alginate O-acetyltransferase
NBIPMDDE_01823 8.37e-313 - - - E - - - GDSL-like Lipase/Acylhydrolase
NBIPMDDE_01824 0.0 - - - E - - - COG COG2755 Lysophospholipase L1 and related esterases
NBIPMDDE_01825 4.28e-136 - 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
NBIPMDDE_01826 2.61e-235 - 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
NBIPMDDE_01827 4.62e-315 atsB - - C ko:K06871 - ko00000 oxidizes both cysteine and serine residues to C-alpha-formylglycine in sulfatase enzyme protein substrates
NBIPMDDE_01828 0.0 tldD1 - - S ko:K03568 - ko00000,ko01002 Putative modulator of DNA gyrase
NBIPMDDE_01829 0.0 recD2_2 3.1.11.5 - L ko:K01144 - ko00000,ko01000 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
NBIPMDDE_01831 2.99e-159 - - - S - - - COG NOG23390 non supervised orthologous group
NBIPMDDE_01832 6.35e-164 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NBIPMDDE_01833 3.59e-138 - - - S - - - Transposase
NBIPMDDE_01834 2.41e-171 yjjG - - S ko:K07025 - ko00000 Hydrolase
NBIPMDDE_01835 1.18e-114 - - - M - - - Outer membrane protein beta-barrel domain
NBIPMDDE_01836 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NBIPMDDE_01837 3.21e-209 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
NBIPMDDE_01838 1.05e-125 - - - S - - - Domain of unknown function (DUF4924)
NBIPMDDE_01839 2.47e-223 mpl 6.3.2.45, 6.3.2.8 - M ko:K01924,ko:K02558 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Mur ligase middle domain
NBIPMDDE_01840 2.87e-214 - - - S - - - Metallo-beta-lactamase superfamily
NBIPMDDE_01842 3.03e-92 - - - E - - - Stress responsive alpha-beta barrel domain protein
NBIPMDDE_01843 0.0 nagZ2 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
NBIPMDDE_01844 0.0 - - - EU - - - Peptidase, S9A B C family, catalytic domain protein
NBIPMDDE_01845 1.01e-25 - - - - - - - -
NBIPMDDE_01846 6.84e-103 rpiB 5.3.1.6 - G ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase
NBIPMDDE_01847 0.0 tkt 2.2.1.1 - G ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the transketolase family
NBIPMDDE_01848 4.66e-164 - - - F - - - NUDIX domain
NBIPMDDE_01849 6.39e-281 galK 2.7.1.6 - G ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
NBIPMDDE_01850 1e-289 gluP - - G ko:K02429 - ko00000,ko02000 Major Facilitator
NBIPMDDE_01851 3.22e-272 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
NBIPMDDE_01852 0.0 - 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 PFAM alpha-L-arabinofuranosidase domain protein
NBIPMDDE_01853 2.37e-256 - - - S ko:K06889 - ko00000 COG COG1073 Hydrolases of the alpha beta superfamily
NBIPMDDE_01854 0.0 - - - - - - - -
NBIPMDDE_01855 1.12e-215 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NBIPMDDE_01856 1.08e-248 - - - F - - - Inosine-uridine preferring nucleoside hydrolase
NBIPMDDE_01857 6.39e-234 glcU - - G ko:K05340 - ko00000,ko02000 Sugar transport protein
NBIPMDDE_01858 1.88e-174 - - - - - - - -
NBIPMDDE_01859 1.45e-85 - - - S - - - GtrA-like protein
NBIPMDDE_01860 7.65e-224 - - GT2 M ko:K20534 - ko00000,ko01000,ko01005,ko02000 Glycosyltransferase
NBIPMDDE_01861 1.6e-94 - - - K - - - stress protein (general stress protein 26)
NBIPMDDE_01862 8.85e-207 - - - K - - - Helix-turn-helix domain
NBIPMDDE_01863 8.94e-272 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
NBIPMDDE_01864 1.3e-252 - - - - - - - -
NBIPMDDE_01866 2.8e-257 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Tryptophanyl-tRNA synthetase
NBIPMDDE_01867 1.3e-116 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_01868 6.25e-184 - - - S - - - Outer membrane protein beta-barrel domain
NBIPMDDE_01869 5.18e-181 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_01870 0.0 - - - P - - - TonB-dependent receptor plug domain
NBIPMDDE_01871 8.59e-252 - - - S - - - Domain of unknown function (DUF4249)
NBIPMDDE_01872 0.0 - - - P - - - TonB-dependent receptor plug domain
NBIPMDDE_01873 1.09e-251 - - - S - - - Domain of unknown function (DUF4249)
NBIPMDDE_01874 2.58e-225 - - - L - - - Endonuclease/Exonuclease/phosphatase family
NBIPMDDE_01875 1.36e-204 - - - - - - - -
NBIPMDDE_01876 2.48e-36 - - - K - - - DNA-templated transcription, initiation
NBIPMDDE_01877 2.14e-154 tal 2.2.1.2 - F ko:K00616,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NBIPMDDE_01878 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
NBIPMDDE_01879 1.17e-181 - - - T - - - COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
NBIPMDDE_01880 3.94e-78 - - - - - - - -
NBIPMDDE_01881 1.32e-97 - - - S ko:K15977 - ko00000 DoxX
NBIPMDDE_01883 4.29e-254 asnA 6.3.1.1 - E ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
NBIPMDDE_01884 1.84e-165 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NBIPMDDE_01885 0.0 - - - M - - - Psort location OuterMembrane, score
NBIPMDDE_01886 3.04e-133 - - - T ko:K06950 - ko00000 HDIG domain protein
NBIPMDDE_01887 1.97e-299 - - - S - - - Protein of unknown function (DUF1343)
NBIPMDDE_01888 0.0 - - - T - - - Histidine kinase-like ATPases
NBIPMDDE_01889 3.77e-102 - - - O - - - META domain
NBIPMDDE_01890 8.35e-94 - - - O - - - META domain
NBIPMDDE_01893 3.46e-305 - - - M - - - Peptidase family M23
NBIPMDDE_01894 9.61e-84 yccF - - S - - - Inner membrane component domain
NBIPMDDE_01895 1.58e-204 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
NBIPMDDE_01896 2.66e-88 ompH - - M ko:K06142 - ko00000 Outer membrane protein (OmpH-like)
NBIPMDDE_01897 3.43e-112 ompH - - M ko:K06142 - ko00000 membrane
NBIPMDDE_01898 0.0 yaeT - - M ko:K07277 - ko00000,ko02000,ko03029 membrane
NBIPMDDE_01899 6.35e-175 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NBIPMDDE_01900 5.27e-179 - - - M - - - Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
NBIPMDDE_01901 2.4e-172 - - - G - - - COG NOG27066 non supervised orthologous group
NBIPMDDE_01902 4.31e-44 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
NBIPMDDE_01903 1.26e-305 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
NBIPMDDE_01904 2.84e-199 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
NBIPMDDE_01905 2.64e-244 pfkA 2.7.1.11, 2.7.1.90 - G ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
NBIPMDDE_01906 0.0 - - - H - - - GH3 auxin-responsive promoter
NBIPMDDE_01907 3.45e-198 - - - I - - - Acid phosphatase homologues
NBIPMDDE_01908 3.73e-269 phnW 2.6.1.37 - E ko:K03430 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000,ko01007 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
NBIPMDDE_01909 1.98e-190 phnX 3.11.1.1 - S ko:K05306 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000 Belongs to the HAD-like hydrolase superfamily. PhnX family
NBIPMDDE_01910 2.61e-314 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_01911 6.76e-213 - - - - - - - -
NBIPMDDE_01912 0.0 - - - U - - - Phosphate transporter
NBIPMDDE_01913 5.18e-128 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_01914 2.82e-234 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_01915 0.0 - - - P - - - Secretin and TonB N terminus short domain
NBIPMDDE_01916 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_01917 1.52e-132 - - - S ko:K07148 - ko00000 Protein of unknown function (DUF418)
NBIPMDDE_01918 3.19e-114 - - - - - - - -
NBIPMDDE_01919 1.61e-273 - - - S - - - Domain of unknown function (DUF5009)
NBIPMDDE_01920 6.13e-281 - - - S - - - COGs COG4299 conserved
NBIPMDDE_01921 3.03e-298 sdaA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase
NBIPMDDE_01922 1.06e-255 - - - G - - - Glycosyl hydrolases family 43
NBIPMDDE_01924 3.05e-193 - - - K ko:K13641,ko:K19333 - ko00000,ko03000 helix_turn_helix isocitrate lyase regulation
NBIPMDDE_01925 0.0 - - - C - - - cytochrome c peroxidase
NBIPMDDE_01926 4.58e-270 - - - J - - - endoribonuclease L-PSP
NBIPMDDE_01927 6.7e-164 - 5.3.1.15 - S ko:K09988 ko00040,map00040 ko00000,ko00001,ko01000 ABC-type sugar transport system, auxiliary component
NBIPMDDE_01928 0.0 - - - S - - - NPCBM/NEW2 domain
NBIPMDDE_01929 0.0 ccmC - - O - - - cytochrome c-type biogenesis protein CcsB
NBIPMDDE_01930 2.76e-70 - - - - - - - -
NBIPMDDE_01931 5.53e-242 - 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 - G ko:K00863,ko:K05878 ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
NBIPMDDE_01932 6.9e-135 - 2.7.1.121 - S ko:K05879 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 DAK2 domain protein
NBIPMDDE_01933 0.0 - 3.4.15.5 - E ko:K01284 - ko00000,ko01000,ko01002 Peptidase family M3
NBIPMDDE_01934 1.77e-90 - 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Pfam:DUF718
NBIPMDDE_01935 3.97e-297 - 3.1.1.11 - G ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Domain of unknown function (DUF4861)
NBIPMDDE_01936 6.42e-140 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
NBIPMDDE_01937 0.0 ybeZ_1 - - T ko:K07175 - ko00000 Phosphate starvation protein PhoH
NBIPMDDE_01938 1.53e-82 - - - S - - - Protein of unknown function (DUF3795)
NBIPMDDE_01939 1.97e-107 - - - S ko:K09793 - ko00000 Protein of unknown function (DUF456)
NBIPMDDE_01940 4.48e-117 - - - Q - - - Thioesterase superfamily
NBIPMDDE_01941 5.53e-205 nfo 3.1.21.2 - L ko:K01151 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
NBIPMDDE_01942 0.0 - - - P - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_01943 0.0 - - - M - - - Dipeptidase
NBIPMDDE_01944 2.07e-104 - - - M - - - Outer membrane protein beta-barrel domain
NBIPMDDE_01945 2.42e-152 pgmB - - S - - - Haloacid dehalogenase-like hydrolase
NBIPMDDE_01946 0.0 - - - G - - - Domain of Unknown Function (DUF1080)
NBIPMDDE_01947 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
NBIPMDDE_01948 0.0 arnT - - M - - - Dolichyl-phosphate-mannose-protein mannosyltransferase
NBIPMDDE_01949 0.0 - - - P - - - Protein of unknown function (DUF4435)
NBIPMDDE_01950 8.6e-220 lytG - - MNU - - - N-acetylmuramoyl-L-alanine amidase
NBIPMDDE_01951 1.53e-288 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
NBIPMDDE_01952 1.41e-264 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NBIPMDDE_01953 2.07e-201 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
NBIPMDDE_01954 1.4e-177 lpxD 2.3.1.191 - M ko:K02536 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NBIPMDDE_01955 0.0 fabZ 3.5.1.108, 4.2.1.59 - IM ko:K16363 ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
NBIPMDDE_01956 3.3e-152 lpxA 2.3.1.129 - M ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 ko00000,ko00001,ko00002,ko01000,ko01005 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NBIPMDDE_01957 3.12e-129 - - - S - - - Plasmid pRiA4b ORF-3-like protein
NBIPMDDE_01958 2.47e-220 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NBIPMDDE_01959 1.53e-85 - - - S ko:K09922 - ko00000 Putative member of DMT superfamily (DUF486)
NBIPMDDE_01960 2.92e-182 ttcA - - H ko:K14058 - ko00000,ko03016 Belongs to the TtcA family
NBIPMDDE_01961 0.0 - - - S - - - Tetratricopeptide repeat protein
NBIPMDDE_01962 4.62e-96 - - - O - - - NfeD-like C-terminal, partner-binding
NBIPMDDE_01963 1.52e-203 - - - S - - - UPF0365 protein
NBIPMDDE_01964 3.32e-206 udp 2.4.2.3 - F ko:K00757 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 phosphorylase
NBIPMDDE_01965 5.64e-173 - 1.5.1.38, 1.5.1.39 - C ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 Nitroreductase family
NBIPMDDE_01966 1.34e-301 - - - S ko:K07133 - ko00000 Psort location Cytoplasmic, score 8.96
NBIPMDDE_01967 1.06e-259 - - - C ko:K07138 - ko00000 Domain of unknown function (DUF362)
NBIPMDDE_01971 0.0 pafA - - P - - - Type I phosphodiesterase / nucleotide pyrophosphatase
NBIPMDDE_01972 8.04e-300 - - - S - - - Domain of unknown function (DUF4105)
NBIPMDDE_01973 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
NBIPMDDE_01974 1.29e-153 coaX 2.7.1.33 - F ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
NBIPMDDE_01975 2.32e-308 - - - I - - - Psort location OuterMembrane, score
NBIPMDDE_01976 0.0 - - - S - - - Tetratricopeptide repeat protein
NBIPMDDE_01977 1.77e-154 - - - S - - - Lipopolysaccharide-assembly, LptC-related
NBIPMDDE_01978 2.42e-281 tlyC - - S ko:K03699 - ko00000,ko02042 Hemolysin
NBIPMDDE_01979 0.0 ppiD 5.2.1.8 - O ko:K01802,ko:K03770 - ko00000,ko01000,ko03110 peptidylprolyl isomerase
NBIPMDDE_01980 6.16e-237 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
NBIPMDDE_01981 8.28e-221 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
NBIPMDDE_01982 2.96e-210 - - - EG ko:K08978 - ko00000,ko02000 EamA-like transporter family
NBIPMDDE_01983 1.46e-148 - - - S - - - Protein of unknown function (DUF3256)
NBIPMDDE_01985 1.02e-108 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
NBIPMDDE_01986 6.59e-124 - - - C - - - lyase activity
NBIPMDDE_01987 1.34e-103 - - - - - - - -
NBIPMDDE_01988 1.01e-224 - - - - - - - -
NBIPMDDE_01990 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
NBIPMDDE_01991 1.92e-238 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Rod shape-determining protein MreB
NBIPMDDE_01992 3.85e-199 mreC - - M ko:K03570 - ko00000,ko03036 shape-determining protein MreC
NBIPMDDE_01993 7.78e-114 mreD - - S - - - rod shape-determining protein MreD
NBIPMDDE_01994 0.0 mrdA 3.4.16.4 - M ko:K05515 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
NBIPMDDE_01995 0.0 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
NBIPMDDE_01996 8.59e-98 gldH - - S - - - GldH lipoprotein
NBIPMDDE_01997 4.12e-283 yaaT - - S - - - PSP1 C-terminal domain protein
NBIPMDDE_01998 3.6e-285 bioF 2.3.1.29, 2.3.1.47 - E ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 2-amino-3-ketobutyrate CoA ligase
NBIPMDDE_02000 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NBIPMDDE_02001 1.36e-49 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 ATP synthase
NBIPMDDE_02002 9.37e-96 - - - S - - - Psort location CytoplasmicMembrane, score
NBIPMDDE_02003 9.4e-257 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
NBIPMDDE_02004 2.87e-29 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NBIPMDDE_02005 2.07e-67 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NBIPMDDE_02006 9.72e-121 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NBIPMDDE_02007 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NBIPMDDE_02008 4.66e-196 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NBIPMDDE_02009 0.0 nrdD 1.1.98.6 - FK ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
NBIPMDDE_02010 1.37e-120 nrdG 1.97.1.4 - C ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NBIPMDDE_02011 0.0 - - - S - - - Putative threonine/serine exporter
NBIPMDDE_02012 0.0 - 2.1.3.15, 6.4.1.3 - I ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Carboxyl transferase domain
NBIPMDDE_02013 2.3e-123 - 6.4.1.1 - I ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Biotin-requiring enzyme
NBIPMDDE_02014 0.0 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K01961,ko:K01965 ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Biotin carboxylase C-terminal domain
NBIPMDDE_02015 1.36e-270 - - - M - - - Acyltransferase family
NBIPMDDE_02018 2.4e-153 - - - - - - - -
NBIPMDDE_02019 0.0 - - - L - - - AAA domain
NBIPMDDE_02020 2.8e-85 - - - O - - - F plasmid transfer operon protein
NBIPMDDE_02021 2.09e-131 - - - K ko:K03088 - ko00000,ko03021 ECF sigma factor
NBIPMDDE_02022 3.61e-244 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_02023 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_02024 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_02025 3.92e-275 - 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 hydrolase, family 43
NBIPMDDE_02026 1.43e-234 abnA - - G - - - Belongs to the glycosyl hydrolase 43 family
NBIPMDDE_02027 0.0 - 3.2.1.45 GH116 G ko:K17108 ko00511,ko00600,ko01100,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term
NBIPMDDE_02028 2.14e-232 - - - S - - - Metalloenzyme superfamily
NBIPMDDE_02029 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_02030 0.0 - - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_02031 5.99e-244 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_02032 0.0 - - - MU - - - Outer membrane efflux protein
NBIPMDDE_02033 0.0 - - - E - - - ABC-type transport system involved in multi-copper enzyme maturation permease component
NBIPMDDE_02034 1.95e-219 - - - V - - - AAA domain, putative AbiEii toxin, Type IV TA system
NBIPMDDE_02035 1.79e-131 rbr - - C - - - Rubrerythrin
NBIPMDDE_02036 0.0 sulP - - P ko:K03321 - ko00000,ko02000 Sulfate permease
NBIPMDDE_02040 3.33e-287 - - - S - - - Outer membrane protein beta-barrel domain
NBIPMDDE_02041 8.73e-98 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
NBIPMDDE_02042 0.0 yngK - - S - - - Glycosyl hydrolase-like 10
NBIPMDDE_02043 4.13e-181 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
NBIPMDDE_02044 1.97e-229 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
NBIPMDDE_02045 1.76e-155 lolA - - M ko:K03634 - ko00000 Outer membrane lipoprotein carrier protein LolA
NBIPMDDE_02046 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 cell division protein FtsK
NBIPMDDE_02048 8.34e-127 - - - S - - - Domain of unknown function (DUF5063)
NBIPMDDE_02049 8.55e-135 rnd - - L - - - 3'-5' exonuclease
NBIPMDDE_02050 4.1e-295 rlmI 2.1.1.191 - J ko:K06969 - ko00000,ko01000,ko03009 SAM-dependent methyltransferase
NBIPMDDE_02051 1.31e-216 mdh 1.1.1.37 - C ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible oxidation of malate to oxaloacetate
NBIPMDDE_02052 3.25e-187 - - - G - - - Domain of Unknown Function (DUF1080)
NBIPMDDE_02053 1.54e-154 lpxA2 2.3.1.129 - M ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 ko00000,ko00001,ko00002,ko01000,ko01005 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NBIPMDDE_02054 0.0 - - - MU - - - Efflux transporter, outer membrane factor
NBIPMDDE_02055 2.12e-211 mexF - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_02056 3.01e-226 - - - K - - - Transcriptional regulator
NBIPMDDE_02057 3.4e-108 - - - S - - - Tetratricopeptide repeat
NBIPMDDE_02058 7.14e-42 - 4.1.1.3 - C ko:K01573 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 Oxaloacetate decarboxylase, gamma chain
NBIPMDDE_02059 0.0 - 6.4.1.1 - C ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Oxaloacetate decarboxylase
NBIPMDDE_02060 8.1e-281 - 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 Na+-transporting oxaloacetate decarboxylase beta subunit
NBIPMDDE_02061 0.0 - - - A - - - Domain of Unknown Function (DUF349)
NBIPMDDE_02062 1.29e-302 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_02063 3.09e-139 folE 3.5.4.16 - F ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase 1
NBIPMDDE_02064 6.53e-113 - - - S - - - Sporulation related domain
NBIPMDDE_02065 5.03e-179 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NBIPMDDE_02066 3.66e-312 - - - S - - - DoxX family
NBIPMDDE_02067 4.11e-129 - - - S - - - Domain of Unknown Function (DUF1599)
NBIPMDDE_02068 2.41e-279 mepM_1 - - M - - - peptidase
NBIPMDDE_02070 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NBIPMDDE_02072 8.66e-76 - - - S - - - Protein of unknown function (DUF1573)
NBIPMDDE_02073 0.0 - - - L - - - AAA domain
NBIPMDDE_02074 1.63e-118 MA20_07440 - - - - - - -
NBIPMDDE_02075 1.61e-54 - - - - - - - -
NBIPMDDE_02077 3.32e-301 - - - S - - - Belongs to the UPF0597 family
NBIPMDDE_02078 8.79e-264 - - - S - - - Winged helix DNA-binding domain
NBIPMDDE_02079 1.37e-220 corA - - P ko:K03284 - ko00000,ko02000 Transporter
NBIPMDDE_02080 2.36e-305 - - - V - - - Polysaccharide biosynthesis C-terminal domain
NBIPMDDE_02081 2.59e-228 - - - S - - - Acetyltransferase (GNAT) domain
NBIPMDDE_02082 6.86e-227 - - - S ko:K01163 - ko00000 Uncharacterised conserved protein (DUF2156)
NBIPMDDE_02083 1.2e-201 - - - K - - - Transcriptional regulator
NBIPMDDE_02084 8.44e-200 - - - K - - - Helix-turn-helix domain
NBIPMDDE_02085 0.0 - - - MP ko:K07798 ko02020,map02020 ko00000,ko00001,ko02000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_02086 2.15e-263 - - - MU - - - Outer membrane efflux protein
NBIPMDDE_02088 1.94e-129 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
NBIPMDDE_02089 1.97e-124 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Hypoxanthine phosphoribosyltransferase
NBIPMDDE_02090 2.92e-20 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
NBIPMDDE_02092 0.0 - - - S - - - Protein of unknown function (DUF3078)
NBIPMDDE_02093 5.98e-100 - - - T ko:K03803 - ko00000,ko03021 Positive regulator of sigma(E), RseC MucC
NBIPMDDE_02094 1.33e-200 rnfB - - C ko:K03616 - ko00000 Ferredoxin
NBIPMDDE_02095 2.25e-301 rnfC - - C ko:K03615 - ko00000 Part of a membrane complex involved in electron transport
NBIPMDDE_02096 2.03e-223 rnfD - - C ko:K03614 - ko00000 Part of a membrane complex involved in electron transport
NBIPMDDE_02097 5.7e-134 rnfG - - C ko:K03612 - ko00000 Part of a membrane complex involved in electron transport
NBIPMDDE_02098 3.51e-119 rnfE - - C ko:K03613 - ko00000 Part of a membrane complex involved in electron transport
NBIPMDDE_02099 1.46e-120 rnfA - - C ko:K03617 - ko00000 Part of a membrane complex involved in electron transport
NBIPMDDE_02100 3.81e-253 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
NBIPMDDE_02101 3.33e-153 - 3.1.3.10, 3.1.3.104 - S ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Haloacid dehalogenase-like hydrolase
NBIPMDDE_02102 1.36e-306 - - - S - - - Protein of unknown function (DUF1015)
NBIPMDDE_02103 3.08e-212 serA 1.1.1.399, 1.1.1.95 - CH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NBIPMDDE_02104 2.4e-256 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NBIPMDDE_02105 6.5e-306 rarA - - L ko:K07478 - ko00000 ATPase (AAA
NBIPMDDE_02107 2.07e-235 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_02108 3.77e-139 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_02109 9.96e-135 ykgB - - S - - - membrane
NBIPMDDE_02110 2.89e-135 - 5.2.1.8 - M ko:K01802,ko:K03773 - ko00000,ko01000,ko03110 Peptidyl-prolyl cis-trans isomerase
NBIPMDDE_02111 0.0 glyQS 6.1.1.14 - J ko:K01880 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of glycine to tRNA(Gly)
NBIPMDDE_02112 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Dihydrolipoyl dehydrogenase
NBIPMDDE_02114 1.45e-93 - - - S - - - Bacterial PH domain
NBIPMDDE_02115 7.45e-167 - - - - - - - -
NBIPMDDE_02116 0.0 nadB 1.4.3.16 - H ko:K00278 ko00250,ko00760,ko01100,map00250,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of L-aspartate to iminoaspartate
NBIPMDDE_02117 1.34e-259 - - - S - - - Domain of unknown function (DUF4221)
NBIPMDDE_02118 2.46e-248 - - - C ko:K07138 - ko00000 Domain of unknown function (DUF362)
NBIPMDDE_02119 0.0 - - - P - - - Sulfatase
NBIPMDDE_02120 6.85e-115 - - - N - - - domain, Protein
NBIPMDDE_02121 2.52e-107 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 Thiol peroxidase
NBIPMDDE_02122 9.97e-245 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NBIPMDDE_02123 2.17e-243 - - - V - - - Acetyltransferase (GNAT) domain
NBIPMDDE_02124 1.02e-149 - - - S - - - GlcNAc-PI de-N-acetylase
NBIPMDDE_02125 0.0 - - - G - - - polysaccharide deacetylase
NBIPMDDE_02126 1.21e-308 - - - M - - - Glycosyltransferase Family 4
NBIPMDDE_02127 6.9e-285 - - - M - - - transferase activity, transferring glycosyl groups
NBIPMDDE_02128 1.93e-242 prmA 2.1.1.222, 2.1.1.64 - J ko:K00568,ko:K02687 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko03009 protein methyltransferase activity
NBIPMDDE_02129 1.11e-84 folK2 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NBIPMDDE_02130 0.0 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
NBIPMDDE_02132 7.05e-248 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
NBIPMDDE_02134 0.0 - 3.2.1.177, 3.2.1.20 GH31 G ko:K01187,ko:K01811 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Domain of unknown function (DUF5110)
NBIPMDDE_02135 1.36e-137 maf - - D ko:K06287 - ko00000 Maf-like protein
NBIPMDDE_02136 3.58e-124 kdsC 3.1.3.45 - S ko:K03270 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
NBIPMDDE_02137 2.92e-184 - - - S - - - Domain of unknown function (DUF2520)
NBIPMDDE_02138 1.32e-130 - - - C - - - nitroreductase
NBIPMDDE_02139 1.07e-188 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_02140 0.0 - 6.2.1.30 - H ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 ko00000,ko00001,ko01000 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
NBIPMDDE_02141 1.69e-93 - - - S - - - ACT domain protein
NBIPMDDE_02142 1.33e-187 yfiO - - S ko:K05807 - ko00000,ko02000 outer membrane assembly lipoprotein YfiO
NBIPMDDE_02143 4.29e-70 rpoZ - - S - - - Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NBIPMDDE_02144 2.43e-94 - - - S - - - Domain of unknown function (DUF4293)
NBIPMDDE_02145 6.66e-159 - - - M - - - Outer membrane protein beta-barrel domain
NBIPMDDE_02146 0.0 lysM - - M - - - Lysin motif
NBIPMDDE_02147 0.0 recQ2 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
NBIPMDDE_02148 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 single-stranded-DNA-specific exonuclease RecJ
NBIPMDDE_02149 1.37e-265 - - - S - - - PD-(D/E)XK nuclease superfamily
NBIPMDDE_02152 1.45e-122 rimN 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Belongs to the SUA5 family
NBIPMDDE_02153 0.0 - - - M - - - sugar transferase
NBIPMDDE_02154 3.02e-208 - - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
NBIPMDDE_02155 1.02e-74 - - - S - - - COG NOG30654 non supervised orthologous group
NBIPMDDE_02156 4.5e-124 ogt 2.1.1.63 - L ko:K00567,ko:K10778 - ko00000,ko01000,ko03000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NBIPMDDE_02157 1.21e-268 - - - EGP - - - Major Facilitator Superfamily
NBIPMDDE_02158 0.0 yfmR - - S ko:K15738 - ko00000,ko02000 ABC transporter
NBIPMDDE_02159 0.0 nhaD - - P - - - Citrate transporter
NBIPMDDE_02160 1.19e-143 - - - S - - - COG NOG25304 non supervised orthologous group
NBIPMDDE_02161 3.4e-82 - 1.20.4.1 - P ko:K00537 - ko00000,ko01000 Belongs to the ArsC family
NBIPMDDE_02162 5.03e-142 mug - - L - - - DNA glycosylase
NBIPMDDE_02163 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Psort location Cytoplasmic, score
NBIPMDDE_02165 2.29e-70 - - - K - - - Helix-turn-helix XRE-family like proteins
NBIPMDDE_02167 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_02168 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_02169 2.14e-87 - - - L - - - regulation of translation
NBIPMDDE_02170 0.0 - - - P - - - Psort location OuterMembrane, score
NBIPMDDE_02171 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_02172 2.14e-279 - - - S ko:K06921 - ko00000 Pfam:Arch_ATPase
NBIPMDDE_02173 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_02174 0.0 - - - G ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_02175 3.08e-208 - - - - - - - -
NBIPMDDE_02176 0.0 - - - U - - - WD40-like Beta Propeller Repeat
NBIPMDDE_02177 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_02178 0.0 modF - - P ko:K05776 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
NBIPMDDE_02179 1.01e-175 argB 2.7.2.8 - E ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
NBIPMDDE_02181 9.29e-225 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NBIPMDDE_02182 9.49e-282 aspC 2.6.1.1 - E ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase
NBIPMDDE_02183 3.96e-294 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NBIPMDDE_02184 0.0 - - - S ko:K07091 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Permease, YjgP YjgQ family
NBIPMDDE_02185 5.26e-88 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_02187 4.75e-216 - - - S - - - Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
NBIPMDDE_02188 0.0 - - - T - - - cheY-homologous receiver domain
NBIPMDDE_02189 9.74e-19 - - - S - - - Major fimbrial subunit protein (FimA)
NBIPMDDE_02190 6.83e-294 - - - S - - - Major fimbrial subunit protein (FimA)
NBIPMDDE_02191 9.48e-14 - - - S - - - Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
NBIPMDDE_02192 5.17e-07 - - - S - - - Domain of unknown function (DUF4906)
NBIPMDDE_02193 2.05e-162 - 2.1.1.130, 2.1.1.151 - H ko:K03394 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Precorrin-2 C20-methyltransferase
NBIPMDDE_02195 8.1e-282 - - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein
NBIPMDDE_02196 5.54e-225 - - - P ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NBIPMDDE_02197 3.73e-239 fhuC 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
NBIPMDDE_02198 1.9e-84 - - - - - - - -
NBIPMDDE_02199 0.0 cbiD 2.1.1.195 - H ko:K02188 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
NBIPMDDE_02200 0.0 cobM 2.1.1.133, 2.1.1.271 - H ko:K05936 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Cobalamin biosynthesis protein CbiG
NBIPMDDE_02201 4.97e-311 cbiE 2.1.1.132 - H ko:K00595 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit
NBIPMDDE_02202 0.0 cobJ 5.4.99.60, 5.4.99.61 - H ko:K06042 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Precorrin-3B C(17)-methyltransferase
NBIPMDDE_02203 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
NBIPMDDE_02204 5.5e-161 - - - G - - - Belongs to the glycosyl hydrolase 43 family
NBIPMDDE_02205 0.0 - - - S - - - ATP-binding cassette protein, ChvD family
NBIPMDDE_02206 0.000493 - - - - - - - -
NBIPMDDE_02207 2.93e-106 - - - E - - - COG NOG09493 non supervised orthologous group
NBIPMDDE_02208 5.88e-230 - - - K - - - AraC-like ligand binding domain
NBIPMDDE_02209 0.0 - - - O - - - ADP-ribosylglycohydrolase
NBIPMDDE_02210 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_02211 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_02212 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_02213 0.0 - - - U - - - WD40-like Beta Propeller Repeat
NBIPMDDE_02215 0.0 - 3.1.3.97 - G ko:K07053 - ko00000,ko01000 DNA polymerase alpha chain like domain
NBIPMDDE_02216 7.18e-54 - - - - - - - -
NBIPMDDE_02219 5.38e-47 - - - M - - - Outer membrane protein beta-barrel domain
NBIPMDDE_02220 0.0 hutH 4.3.1.3 - E ko:K01745 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Histidine ammonia-lyase
NBIPMDDE_02221 3.52e-136 fchA - - E - - - Methenyltetrahydrofolate cyclohydrolase
NBIPMDDE_02222 3.71e-300 hutI 3.5.2.7 - Q ko:K01468 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Imidazolone-5-propionate hydrolase
NBIPMDDE_02223 2.86e-214 ftcD 2.1.2.5, 4.3.1.4 - E ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 ko00000,ko00001,ko01000,ko03036,ko04147 Glutamate formiminotransferase
NBIPMDDE_02224 0.0 hutU 4.2.1.49 - E ko:K01712 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
NBIPMDDE_02225 0.0 secD - - U ko:K03072,ko:K12257 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NBIPMDDE_02226 2.29e-227 - - - S ko:K03646 - ko00000,ko02000 Domain of unknown function (DUF4468) with TBP-like fold
NBIPMDDE_02227 8.95e-121 - - - S - - - Domain of unknown function (DUF4468) with TBP-like fold
NBIPMDDE_02228 1.82e-276 - - - S - - - Endonuclease Exonuclease phosphatase family protein
NBIPMDDE_02229 2.14e-200 - - - S - - - Rhomboid family
NBIPMDDE_02230 6.88e-169 - 3.4.21.105 - S ko:K09650 - ko00000,ko01000,ko01002,ko03029 membrane
NBIPMDDE_02231 1.01e-52 hupB - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
NBIPMDDE_02235 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
NBIPMDDE_02236 1.02e-198 - - - S - - - membrane
NBIPMDDE_02237 7.05e-115 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NBIPMDDE_02238 0.0 - - - T - - - Two component regulator propeller
NBIPMDDE_02239 8.14e-239 nadA 2.5.1.72 - H ko:K03517 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
NBIPMDDE_02241 1.34e-125 spoU - - J - - - RNA methyltransferase
NBIPMDDE_02242 4.06e-129 - - - S - - - Domain of unknown function (DUF4294)
NBIPMDDE_02244 8.78e-197 - - - L - - - photosystem II stabilization
NBIPMDDE_02245 0.0 - - - L - - - Psort location OuterMembrane, score
NBIPMDDE_02246 2.4e-185 - - - C - - - radical SAM domain protein
NBIPMDDE_02247 0.0 - 3.4.21.50 - E ko:K01337 - ko00000,ko01000,ko01002 Leucine-rich repeat (LRR) protein
NBIPMDDE_02248 1.63e-259 - - - S - - - 6-bladed beta-propeller
NBIPMDDE_02249 4.94e-146 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NBIPMDDE_02250 6.24e-97 fjo27 - - S - - - VanZ like family
NBIPMDDE_02251 6.89e-299 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NBIPMDDE_02252 1.41e-199 bglA_1 - - G - - - Glycosyl hydrolases family 16
NBIPMDDE_02253 0.0 lacZ_17 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolases family 2, TIM barrel domain
NBIPMDDE_02255 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
NBIPMDDE_02256 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_02257 0.0 - - - P - - - TonB-dependent receptor plug domain
NBIPMDDE_02258 2.07e-153 - - - PT - - - COG3712 Fe2 -dicitrate sensor, membrane component
NBIPMDDE_02259 0.0 - - - S - - - COG NOG26639 non supervised orthologous group
NBIPMDDE_02260 6.29e-296 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
NBIPMDDE_02261 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
NBIPMDDE_02262 0.0 - - - C - - - NapC/NirT cytochrome c family, N-terminal region
NBIPMDDE_02263 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
NBIPMDDE_02264 3.04e-231 - - - G - - - Xylose isomerase-like TIM barrel
NBIPMDDE_02265 8.15e-164 - - - K ko:K07322 - ko00000 Di-iron-containing protein involved in the repair of iron-sulfur clusters
NBIPMDDE_02266 1.41e-128 - - - K - - - helix_turn_helix, Lux Regulon
NBIPMDDE_02267 0.0 - - - P ko:K02014 - ko00000,ko02000 Psort location OuterMembrane, score 10.00
NBIPMDDE_02268 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_02269 9.31e-99 gnd 1.1.1.343, 1.1.1.44 - G ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NBIPMDDE_02270 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NBIPMDDE_02271 1.15e-175 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 6-phosphogluconolactonase
NBIPMDDE_02272 1.16e-209 - - - S ko:K08974 - ko00000 Domain of unknown function (DUF368)
NBIPMDDE_02273 1.41e-293 - - - S - - - Tetratricopeptide repeat
NBIPMDDE_02274 0.0 glnS 6.1.1.18 - J ko:K01886 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NBIPMDDE_02275 8.15e-284 mntH - - P ko:K03322 - ko00000,ko02000 Natural resistance-associated macrophage protein
NBIPMDDE_02276 2.39e-310 - - - T - - - Histidine kinase
NBIPMDDE_02277 0.0 zraR_2 - - T - - - COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
NBIPMDDE_02278 6.65e-315 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 Outer membrane efflux protein
NBIPMDDE_02279 2.69e-277 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_02280 3.36e-219 fabK 1.3.1.9 - S ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 2-nitropropane dioxygenase
NBIPMDDE_02281 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
NBIPMDDE_02282 0.0 nrd 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
NBIPMDDE_02283 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NBIPMDDE_02284 8.71e-201 - - - Q ko:K02067 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Virulence factor Mce family protein
NBIPMDDE_02285 1.06e-280 amiA 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
NBIPMDDE_02286 8.85e-92 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
NBIPMDDE_02287 1.44e-56 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NBIPMDDE_02288 2.32e-75 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
NBIPMDDE_02289 7.09e-30 - - - S - - - Domain of unknown function (DUF4248)
NBIPMDDE_02290 8.73e-262 - - - I - - - Alpha/beta hydrolase family
NBIPMDDE_02291 0.0 - - - S - - - Capsule assembly protein Wzi
NBIPMDDE_02292 4.47e-174 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
NBIPMDDE_02294 0.0 - - - M - - - Periplasmic copper-binding protein (NosD)
NBIPMDDE_02295 5.66e-234 - - - S - - - Domain of unknown function (DUF4466)
NBIPMDDE_02296 1.66e-119 - - - - - - - -
NBIPMDDE_02297 0.0 - - - P - - - SusD family
NBIPMDDE_02298 0.0 - - - H - - - CarboxypepD_reg-like domain
NBIPMDDE_02299 1.33e-236 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_02300 9.27e-126 - - - K - - - Sigma-70, region 4
NBIPMDDE_02302 1.41e-57 - - - K - - - helix_turn_helix, arabinose operon control protein
NBIPMDDE_02303 7.54e-143 - - - L - - - DNA-binding protein
NBIPMDDE_02304 0.0 comM - - O ko:K07391 - ko00000 magnesium chelatase
NBIPMDDE_02305 3.62e-268 - - - CO - - - Domain of unknown function (DUF4369)
NBIPMDDE_02306 0.0 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
NBIPMDDE_02308 1.11e-16 - - - S - - - Protein of unknown function DUF86
NBIPMDDE_02309 4.31e-76 - - - S ko:K07075 - ko00000 Nucleotidyltransferase domain
NBIPMDDE_02310 3.38e-252 oorB 1.2.7.11, 1.2.7.3 - C ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 ferredoxin oxidoreductase subunit beta
NBIPMDDE_02311 0.0 porA 1.2.7.11, 1.2.7.3 - C ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoacid acceptor oxidoreductase, alpha subunit
NBIPMDDE_02312 9.92e-285 ald 1.4.1.1 - E ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 ko00000,ko00001,ko01000 Alanine dehydrogenase/PNT, N-terminal domain
NBIPMDDE_02313 3.18e-118 aroK 2.7.1.71 - F ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
NBIPMDDE_02314 2.25e-157 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Ribonuclease H
NBIPMDDE_02315 0.0 - 1.1.1.136 - M ko:K02474,ko:K13015 ko00520,map00520 ko00000,ko00001,ko01000,ko01005 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NBIPMDDE_02316 5.71e-175 - - - M - - - Capsular polysaccharide synthesis protein
NBIPMDDE_02318 0.0 - - - M - - - Listeria-Bacteroides repeat domain (List_Bact_rpt)
NBIPMDDE_02319 4.35e-86 - - - S - - - Protein of unknown function DUF86
NBIPMDDE_02320 1.66e-61 - - - S ko:K07075 - ko00000 nucleotidyltransferase activity
NBIPMDDE_02321 0.0 - - - S - - - Putative carbohydrate metabolism domain
NBIPMDDE_02322 4.29e-172 - - - NU - - - Tfp pilus assembly protein FimV
NBIPMDDE_02323 0.0 - - - S - - - Domain of unknown function (DUF4493)
NBIPMDDE_02324 4.16e-314 - - - S - - - Domain of unknown function (DUF4493)
NBIPMDDE_02326 0.0 - - - S - - - Domain of unknown function (DUF4493)
NBIPMDDE_02327 7.05e-296 - - - S - - - Alginate lyase
NBIPMDDE_02328 0.0 - - - T - - - histidine kinase DNA gyrase B
NBIPMDDE_02329 0.0 - - - S ko:K07137 - ko00000 FAD-binding protein
NBIPMDDE_02330 5.48e-175 - - - - - - - -
NBIPMDDE_02332 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NBIPMDDE_02333 6.11e-229 - - - - - - - -
NBIPMDDE_02334 1.1e-120 - - - S - - - Uncharacterized protein containing a ferredoxin domain (DUF2148)
NBIPMDDE_02335 0.0 eam 5.4.3.2 - E ko:K01843 ko00310,map00310 ko00000,ko00001,ko01000 KamA family
NBIPMDDE_02336 3.66e-41 - - - - - - - -
NBIPMDDE_02337 2.69e-157 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_02338 5.64e-227 - - - PT - - - COG3712 Fe2 -dicitrate sensor, membrane component
NBIPMDDE_02339 0.0 - - - P - - - TonB-dependent receptor plug domain
NBIPMDDE_02340 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_02341 0.0 - - - C - - - FAD dependent oxidoreductase
NBIPMDDE_02342 0.0 csxA_4 - - G - - - COG COG3250 Beta-galactosidase beta-glucuronidase
NBIPMDDE_02343 2.36e-305 - - - M - - - sodium ion export across plasma membrane
NBIPMDDE_02344 6.86e-167 - - - CO - - - Domain of unknown function (DUF4369)
NBIPMDDE_02345 3.53e-100 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NBIPMDDE_02346 2.57e-90 hinT - - FG ko:K02503 - ko00000,ko04147 HIT family hydrolase
NBIPMDDE_02348 9.71e-143 - - - - - - - -
NBIPMDDE_02349 7.28e-246 - - - KT ko:K03973 - ko00000,ko02048,ko03000 PspC domain
NBIPMDDE_02350 1.34e-72 - - - K ko:K10947 - ko00000,ko03000 Transcriptional regulator
NBIPMDDE_02351 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 Long-chain fatty acid--CoA ligase
NBIPMDDE_02352 2.39e-228 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NBIPMDDE_02355 1.4e-137 bcr - - EGP ko:K03446,ko:K07552 - ko00000,ko00002,ko02000 Sugar (and other) transporter
NBIPMDDE_02357 3.64e-291 - - - S - - - Domain of unknown function (DUF4272)
NBIPMDDE_02358 0.0 - - - S - - - COG NOG10880 non supervised orthologous group
NBIPMDDE_02360 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_02361 0.0 - - - S - - - alpha beta
NBIPMDDE_02362 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
NBIPMDDE_02363 4.19e-204 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 dihydropteroate synthase
NBIPMDDE_02364 1.28e-181 dacA - - S - - - Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
NBIPMDDE_02365 2.05e-232 pta 2.3.1.8 - C ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Phosphotransacetylase
NBIPMDDE_02366 1.01e-293 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NBIPMDDE_02367 9.51e-196 lpxH 3.6.1.54 - S ko:K03269 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-2,3-diacylglucosamine hydrolase
NBIPMDDE_02368 2.01e-68 yitW - - S - - - FeS assembly SUF system protein
NBIPMDDE_02369 6.85e-155 radC - - E ko:K03630 - ko00000 Belongs to the UPF0758 family
NBIPMDDE_02370 5.82e-130 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NBIPMDDE_02371 7.2e-144 lrgB - - M - - - TIGR00659 family
NBIPMDDE_02372 5.44e-60 - - - S ko:K06518 - ko00000,ko02000 Murein hydrolase
NBIPMDDE_02373 4.04e-36 - - - P ko:K07085 - ko00000 Predicted Permease Membrane Region
NBIPMDDE_02374 0.0 uvrD2 - - L - - - COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
NBIPMDDE_02375 1.51e-139 - - - S - - - Domain of unknown function (DUF4923)
NBIPMDDE_02376 1.41e-241 fba 4.1.2.13 - G ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate
NBIPMDDE_02377 4.78e-55 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 50S ribosomal protein L31 type B
NBIPMDDE_02378 5.54e-267 mdsC - - S - - - Phosphotransferase enzyme family
NBIPMDDE_02379 7.37e-133 - - - T - - - Cyclic nucleotide-binding domain protein
NBIPMDDE_02380 1.11e-284 - - - I - - - Acyltransferase family
NBIPMDDE_02381 1.5e-257 tagO - - M - - - UDP-N-acetylmuramyl pentapeptide phosphotransferase
NBIPMDDE_02382 2.01e-291 - 1.1.1.336 - M ko:K02472 ko00520,ko05111,map00520,map05111 ko00000,ko00001,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NBIPMDDE_02383 0.0 - - - S - - - Polysaccharide biosynthesis protein
NBIPMDDE_02384 1.71e-238 - - - M - - - Glycosyltransferase, group 1 family
NBIPMDDE_02385 1.1e-283 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NBIPMDDE_02386 4.18e-181 - - - S - - - Beta-lactamase superfamily domain
NBIPMDDE_02387 2.42e-92 gloA 4.4.1.5 - E ko:K01759 ko00620,map00620 ko00000,ko00001,ko01000 Lactoylglutathione lyase
NBIPMDDE_02388 4.82e-227 glcK 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 glucokinase
NBIPMDDE_02389 2.33e-112 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 Belongs to the Nudix hydrolase family
NBIPMDDE_02390 0.0 - - - G - - - Tetratricopeptide repeat protein
NBIPMDDE_02391 0.0 - - - H - - - Psort location OuterMembrane, score
NBIPMDDE_02392 9.03e-312 - - - V - - - Mate efflux family protein
NBIPMDDE_02393 0.0 metZ 2.5.1.49 - E ko:K01740,ko:K10764 ko00270,ko00920,ko01100,map00270,map00920,map01100 ko00000,ko00001,ko01000 Cys/Met metabolism PLP-dependent enzyme
NBIPMDDE_02394 5.3e-286 - - - M - - - Glycosyl transferase family 1
NBIPMDDE_02396 1.91e-304 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NBIPMDDE_02397 2.73e-153 - - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
NBIPMDDE_02398 2.54e-50 yidD - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
NBIPMDDE_02399 1.24e-82 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
NBIPMDDE_02400 1.14e-182 hemD 4.2.1.75 - H ko:K01719 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Uroporphyrinogen-III synthase
NBIPMDDE_02401 2.8e-171 - - - S - - - Domain of unknown function (DUF4271)
NBIPMDDE_02402 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
NBIPMDDE_02403 0.0 - - - S ko:K07263 - ko00000,ko01000,ko01002 Belongs to the peptidase M16 family
NBIPMDDE_02404 1.66e-206 - - - S - - - membrane
NBIPMDDE_02405 1.07e-297 - - - G - - - Glycosyl hydrolases family 43
NBIPMDDE_02406 2.11e-217 - 5.3.1.22 - G ko:K01816 ko00630,ko01100,map00630,map01100 ko00000,ko00001,ko01000 Xylose isomerase-like TIM barrel
NBIPMDDE_02407 9.66e-137 - - - - - - - -
NBIPMDDE_02408 0.0 aspT - - S ko:K07085 - ko00000 Predicted Permease Membrane Region
NBIPMDDE_02409 0.0 aspD 4.1.1.12 - E ko:K09758 ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230 ko00000,ko00001,ko01000 Aminotransferase class I and II
NBIPMDDE_02410 0.0 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 aconitate hydratase
NBIPMDDE_02411 5.34e-306 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Isocitrate/isopropylmalate dehydrogenase
NBIPMDDE_02412 0.0 prpC 2.3.3.1, 2.3.3.5 - C ko:K01647,ko:K01659 ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Citrate synthase, C-terminal domain
NBIPMDDE_02414 1.54e-35 - - - S - - - Domain of unknown function (DUF4250)
NBIPMDDE_02415 3.57e-74 - - - - - - - -
NBIPMDDE_02416 6.71e-203 - 3.1.2.12 CE1 S ko:K01070 ko00680,ko01120,ko01200,map00680,map01120,map01200 ko00000,ko00001,ko01000 Putative esterase
NBIPMDDE_02417 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
NBIPMDDE_02418 5.59e-134 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NBIPMDDE_02419 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_02420 6.12e-270 - - - S - - - Domain of unknown function (DUF4925)
NBIPMDDE_02421 5.82e-203 - - - K - - - helix_turn_helix, arabinose operon control protein
NBIPMDDE_02422 3.87e-282 - - - EGP - - - Major Facilitator Superfamily
NBIPMDDE_02423 2.9e-276 pdxB 1.1.1.290 - H ko:K03473 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate
NBIPMDDE_02424 1.16e-209 - - - S - - - COG NOG24904 non supervised orthologous group
NBIPMDDE_02426 0.0 - - - P - - - Psort location OuterMembrane, score
NBIPMDDE_02427 4.44e-147 - - - S - - - Protein of unknown function (Porph_ging)
NBIPMDDE_02428 1.51e-243 - - - K - - - helix_turn_helix, arabinose operon control protein
NBIPMDDE_02429 1.84e-284 - - - S - - - Acyltransferase family
NBIPMDDE_02430 1.11e-231 tolB3 - - U - - - WD40-like Beta Propeller Repeat
NBIPMDDE_02431 0.0 - - - E - - - Domain of Unknown Function (DUF1080)
NBIPMDDE_02432 2.42e-262 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
NBIPMDDE_02434 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NBIPMDDE_02436 2.77e-43 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
NBIPMDDE_02437 6.17e-304 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, permease protein
NBIPMDDE_02438 2.56e-251 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_02439 2.05e-312 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 Outer membrane efflux protein
NBIPMDDE_02440 0.0 - 3.2.1.20, 3.2.1.3 GH31,GH97 V ko:K01187,ko:K21574 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-glucosidase
NBIPMDDE_02441 3.26e-285 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 C-terminal, oligomerisation
NBIPMDDE_02442 2.35e-92 - - - K - - - transcriptional regulator (AraC family)
NBIPMDDE_02443 5.12e-244 - - - G - - - F5 8 type C domain
NBIPMDDE_02444 2.45e-292 - - - S - - - 6-bladed beta-propeller
NBIPMDDE_02445 0.0 glnA 6.3.1.2 - S ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Belongs to the glutamine synthetase family
NBIPMDDE_02446 0.0 - - - E - - - Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NBIPMDDE_02447 1.41e-140 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
NBIPMDDE_02449 0.0 - - - P ko:K16089 - ko00000,ko02000 TonB-dependent receptor
NBIPMDDE_02451 1.32e-63 - - - - - - - -
NBIPMDDE_02452 0.0 maeB 1.1.1.38, 1.1.1.40 - C ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 ko00000,ko00001,ko00002,ko01000 Malic enzyme
NBIPMDDE_02453 0.0 mepA_7 - - V - - - COG0534 Na -driven multidrug efflux pump
NBIPMDDE_02454 1.37e-95 mip 5.2.1.8 - O ko:K01802 - ko00000,ko01000 FKBP-type peptidyl-prolyl cis-trans isomerase
NBIPMDDE_02455 0.0 - - - M - - - Outer membrane efflux protein
NBIPMDDE_02456 1.02e-86 - - - S - - - Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
NBIPMDDE_02457 6.06e-255 - - - G - - - AP endonuclease family 2 C terminus
NBIPMDDE_02458 0.0 - - - P - - - Outer membrane protein beta-barrel family
NBIPMDDE_02459 0.0 - - - H - - - CarboxypepD_reg-like domain
NBIPMDDE_02460 0.0 - - - P ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_02461 4.57e-289 - - - M - - - Domain of unknown function (DUF1735)
NBIPMDDE_02465 1.67e-274 mtrC - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_02466 5.83e-138 - - - - - - - -
NBIPMDDE_02467 1.84e-248 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
NBIPMDDE_02468 7.14e-188 uxuB - - IQ - - - KR domain
NBIPMDDE_02469 6.49e-290 uxuA 4.2.1.8 - G ko:K01686 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the dehydration of D-mannonate
NBIPMDDE_02470 8.98e-191 nlpD_2 - - M - - - Peptidase family M23
NBIPMDDE_02471 3.99e-127 marC - - U ko:K05595 - ko00000,ko02000 UPF0056 membrane protein
NBIPMDDE_02472 3.07e-185 - - - S - - - Membrane
NBIPMDDE_02473 1.15e-94 cspG - - K - - - 'Cold-shock' DNA-binding domain
NBIPMDDE_02474 3.57e-25 - - - S - - - Pfam:RRM_6
NBIPMDDE_02475 1.36e-142 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA-3-methyladenine glycosylase
NBIPMDDE_02477 5.84e-226 - - - G - - - pfkB family carbohydrate kinase
NBIPMDDE_02478 0.0 prc 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
NBIPMDDE_02479 7.98e-274 - - - S - - - Peptidase M50
NBIPMDDE_02480 9.4e-280 - - - S ko:K07098 - ko00000 Ser Thr phosphatase family protein
NBIPMDDE_02481 5.77e-268 - - - S ko:K07098 - ko00000 Calcineurin-like phosphoesterase superfamily domain
NBIPMDDE_02482 8.86e-93 - - - D - - - Filamentation induced by cAMP protein fic
NBIPMDDE_02483 0.0 csxA_4 - - G - - - COG COG3250 Beta-galactosidase beta-glucuronidase
NBIPMDDE_02484 7.85e-290 - 3.2.1.197 - G ko:K21065 - ko00000,ko01000 beta-1,4-mannooligosaccharide phosphorylase
NBIPMDDE_02485 1.45e-159 - - - S - - - Protein of unknown function (DUF3823)
NBIPMDDE_02486 2.36e-105 - - - F - - - SusD family
NBIPMDDE_02487 6.67e-190 - - - S - - - Glycosyl transferase, family 2
NBIPMDDE_02488 1.06e-229 - - - KLT - - - Lipopolysaccharide kinase (Kdo/WaaP) family
NBIPMDDE_02489 2.02e-245 - - - M - - - transferase activity, transferring glycosyl groups
NBIPMDDE_02490 6.03e-248 - - GT9 M ko:K02843 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 glycosyl transferase family
NBIPMDDE_02491 5.54e-144 - - - M - - - Protein of unknown function (DUF4254)
NBIPMDDE_02492 4.84e-160 - - - KT - - - Transcriptional regulatory protein, C terminal
NBIPMDDE_02493 0.0 - 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
NBIPMDDE_02494 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
NBIPMDDE_02496 8.14e-73 - - - S - - - Protein of unknown function DUF86
NBIPMDDE_02497 0.0 - - - P - - - Outer membrane protein beta-barrel family
NBIPMDDE_02498 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
NBIPMDDE_02499 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
NBIPMDDE_02500 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NBIPMDDE_02501 3.43e-186 dpm1 2.4.1.83 GT2 S ko:K00721 ko00510,ko01100,map00510,map01100 ko00000,ko00001,ko01000,ko01003 Dolichyl-phosphate beta-D-mannosyltransferase
NBIPMDDE_02504 0.0 - - - P ko:K16089 - ko00000,ko02000 TonB-dependent receptor
NBIPMDDE_02505 1.69e-180 - - - PT - - - COG3712 Fe2 -dicitrate sensor, membrane component
NBIPMDDE_02506 0.0 - - - P - - - CarboxypepD_reg-like domain
NBIPMDDE_02507 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_02508 8.99e-116 - - - K - - - Putative helix-turn-helix protein, YlxM / p13 like
NBIPMDDE_02509 0.0 - - - EG - - - Protein of unknown function (DUF2723)
NBIPMDDE_02510 3.09e-155 pgdA_1 - - G - - - polysaccharide deacetylase
NBIPMDDE_02511 2.1e-253 queG 1.17.99.6 - C ko:K18979 - ko00000,ko01000,ko03016 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
NBIPMDDE_02512 9.45e-308 - - - S - - - PS-10 peptidase S37
NBIPMDDE_02513 3.34e-110 - - - K - - - Transcriptional regulator
NBIPMDDE_02514 4.3e-168 - - - S - - - Domain of unknown function (DUF5036)
NBIPMDDE_02515 4.56e-104 - - - S - - - SNARE associated Golgi protein
NBIPMDDE_02516 3.17e-236 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
NBIPMDDE_02517 2.09e-305 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
NBIPMDDE_02518 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_02519 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_02520 1.05e-126 - - - S - - - Domain of unknown function (DUF3332)
NBIPMDDE_02521 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
NBIPMDDE_02522 4.06e-186 piuB - - S - - - PepSY-associated TM region
NBIPMDDE_02523 2.71e-130 - - - M ko:K06142 - ko00000 Outer membrane protein (OmpH-like)
NBIPMDDE_02524 0.0 - - - E ko:K01270 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Catalyzes the hydrolysis of Xaa-His dipeptides
NBIPMDDE_02525 0.0 - - - - - - - -
NBIPMDDE_02526 1.86e-270 - - - S - - - endonuclease
NBIPMDDE_02527 0.0 - - - M - - - Peptidase family M23
NBIPMDDE_02528 0.0 pgcA 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase
NBIPMDDE_02529 1.83e-103 cdd 3.5.4.5 - F ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
NBIPMDDE_02530 1.02e-192 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NBIPMDDE_02531 3.15e-171 hisA 5.3.1.16 - E ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis protein
NBIPMDDE_02532 2.81e-180 hisF - - E ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
NBIPMDDE_02533 8.19e-140 hisI 3.5.4.19, 3.6.1.31 - E ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis bifunctional protein hisIE
NBIPMDDE_02534 6.4e-164 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 ABC transporter, ATP-binding protein
NBIPMDDE_02535 2.84e-316 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
NBIPMDDE_02537 2.95e-284 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
NBIPMDDE_02538 4.52e-282 - - - M - - - Glycosyltransferase family 2
NBIPMDDE_02539 2.2e-291 lolE_1 - - M ko:K09808 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
NBIPMDDE_02540 1.95e-291 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aspartate aminotransferase
NBIPMDDE_02542 2.81e-19 - - - S ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_02544 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
NBIPMDDE_02545 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_02546 8.67e-101 - - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
NBIPMDDE_02547 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 cadmium-exporting ATPase
NBIPMDDE_02548 3.4e-262 - - - G - - - Glycosyl hydrolases family 32 N-terminal domain
NBIPMDDE_02549 7.26e-256 - - - G - - - Glycosyl hydrolases family 32 N-terminal domain
NBIPMDDE_02550 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
NBIPMDDE_02551 0.0 - - - P - - - TonB dependent receptor
NBIPMDDE_02552 1.55e-59 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
NBIPMDDE_02553 1.37e-225 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
NBIPMDDE_02554 0.0 dgt 3.1.5.1 - F ko:K01129 ko00230,map00230 ko00000,ko00001,ko01000 Dehydrogenase
NBIPMDDE_02555 6.98e-143 yciO - - J - - - Belongs to the SUA5 family
NBIPMDDE_02556 1.84e-202 fabI 1.3.1.10, 1.3.1.9 - I ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl- acyl-carrier-protein reductase NADH
NBIPMDDE_02557 0.0 alr 5.1.1.1, 6.3.2.10 - M ko:K01775,ko:K01929 ko00300,ko00473,ko00550,ko01100,ko01502,map00300,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NBIPMDDE_02558 2.75e-244 - - - E - - - GSCFA family
NBIPMDDE_02559 2.58e-253 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 mannose-1-phosphate guanylyltransferase
NBIPMDDE_02561 2.56e-82 - - - S - - - Abi-like protein
NBIPMDDE_02562 2e-200 queC 6.3.4.20 - F ko:K06920 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
NBIPMDDE_02563 2.71e-117 queF 1.7.1.13 - H ko:K09457 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
NBIPMDDE_02564 8.45e-195 - - - G - - - Domain of Unknown Function (DUF1080)
NBIPMDDE_02565 0.0 dnaX 2.7.7.7 - H ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NBIPMDDE_02566 1.98e-64 - - - D - - - Septum formation initiator
NBIPMDDE_02567 4.84e-71 - - - S - - - Psort location CytoplasmicMembrane, score
NBIPMDDE_02568 0.0 - - - H - - - TonB-dependent Receptor Plug Domain
NBIPMDDE_02572 1.53e-74 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NBIPMDDE_02573 1.05e-36 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
NBIPMDDE_02574 6.62e-133 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NBIPMDDE_02575 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NBIPMDDE_02577 5.94e-168 - 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
NBIPMDDE_02579 1.12e-144 - - - - - - - -
NBIPMDDE_02580 3.58e-282 - - - S - - - 6-bladed beta-propeller
NBIPMDDE_02582 5.78e-97 - - - S - - - COG NOG14473 non supervised orthologous group
NBIPMDDE_02583 8.75e-145 coaE 2.7.1.24 - H ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NBIPMDDE_02584 3.04e-234 - - - S - - - YbbR-like protein
NBIPMDDE_02585 7.72e-38 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase subunit YajC
NBIPMDDE_02586 1.32e-218 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NBIPMDDE_02587 2.17e-81 - - - S - - - Protein of unknown function (DUF3276)
NBIPMDDE_02588 1.81e-22 - - - C - - - 4Fe-4S binding domain
NBIPMDDE_02589 9.45e-180 porT - - S - - - PorT protein
NBIPMDDE_02590 9.12e-199 cdsA 2.7.7.41 - S ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
NBIPMDDE_02591 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NBIPMDDE_02592 2.58e-82 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
NBIPMDDE_02594 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
NBIPMDDE_02595 5.89e-197 ramA_1 3.5.1.3 - S ko:K13566 ko00250,map00250 ko00000,ko00001,ko01000 Hydrolase, carbon-nitrogen family
NBIPMDDE_02596 1.19e-135 - - - I - - - Acyltransferase
NBIPMDDE_02597 4.49e-60 - - - S - - - COG NOG23371 non supervised orthologous group
NBIPMDDE_02598 0.0 - 2.4.1.11 GT3 G ko:K00693 ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931 ko00000,ko00001,ko01000,ko01003 starch synthase
NBIPMDDE_02599 0.0 glgP 2.4.1.1, 2.4.1.11, 2.4.1.8 GH65,GT3,GT35 G ko:K00688,ko:K00691,ko:K16153 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000,ko01003 alpha-glucan phosphorylase
NBIPMDDE_02600 1.33e-151 - - - V ko:K02003 - ko00000,ko00002,ko02000 Rad17 cell cycle checkpoint protein
NBIPMDDE_02601 2.91e-277 - - - CO - - - Domain of unknown function (DUF4369)
NBIPMDDE_02602 4.98e-250 - - - S - - - Acyltransferase family
NBIPMDDE_02603 0.0 - - - E - - - Prolyl oligopeptidase family
NBIPMDDE_02604 4.33e-231 - - - T - - - Histidine kinase-like ATPases
NBIPMDDE_02605 0.0 - - - S - - - 6-bladed beta-propeller
NBIPMDDE_02606 3.94e-62 - - - GM ko:K21572 - ko00000,ko02000 SusD family
NBIPMDDE_02607 7.49e-236 - - - EM - - - Dihydrodipicolinate synthetase family
NBIPMDDE_02608 1.19e-282 - 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 BNR/Asp-box repeat
NBIPMDDE_02609 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
NBIPMDDE_02610 0.0 - 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 N-terminal domain of BNR-repeat neuraminidase
NBIPMDDE_02611 0.0 - - - E - - - Dipeptidyl peptidase IV (DPP IV) N-terminal region
NBIPMDDE_02612 1.25e-195 nudC 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 NADH pyrophosphatase zinc ribbon domain
NBIPMDDE_02613 3.38e-67 waaA 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 M ko:K02527 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 transferase
NBIPMDDE_02614 1.42e-210 waaA 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 M ko:K02527 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 transferase
NBIPMDDE_02615 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NBIPMDDE_02616 0.0 - - - S ko:K07037 - ko00000 7TM receptor with intracellular HD hydrolase
NBIPMDDE_02617 3.46e-120 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NBIPMDDE_02618 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NBIPMDDE_02619 9.96e-135 - - - M - - - Outer membrane protein beta-barrel domain
NBIPMDDE_02620 4.3e-111 ispF 4.6.1.12 - I ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
NBIPMDDE_02621 9.19e-76 - - - J ko:K03113 ko03013,map03013 ko00000,ko00001,ko03012 Translation initiation factor
NBIPMDDE_02622 0.0 addA - - L - - - Belongs to the helicase family. UvrD subfamily
NBIPMDDE_02623 1.51e-155 psd 4.1.1.65 - I ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
NBIPMDDE_02624 1.01e-160 pssA 2.7.8.8 - I ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NBIPMDDE_02625 4.51e-46 - - - S - - - Domain of unknown function (DUF4834)
NBIPMDDE_02626 2.65e-102 tadA 3.5.4.33 - FJ ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
NBIPMDDE_02627 4.54e-49 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_02628 3.17e-87 - - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
NBIPMDDE_02629 4.29e-85 - - - S - - - YjbR
NBIPMDDE_02630 2.48e-174 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Biotin/lipoate A/B protein ligase family
NBIPMDDE_02631 3.43e-48 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_02633 3.42e-258 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NBIPMDDE_02634 0.0 iorA 1.2.7.8 - C ko:K00179 - br01601,ko00000,ko01000 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
NBIPMDDE_02635 6.93e-131 iorB 1.2.7.8 - C ko:K00180 - br01601,ko00000,ko01000 Indolepyruvate
NBIPMDDE_02636 1.72e-120 - - - CO - - - SCO1/SenC
NBIPMDDE_02637 1.4e-190 - - - C - - - 4Fe-4S binding domain
NBIPMDDE_02638 0.0 - - - G - - - Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
NBIPMDDE_02639 1.62e-96 sufE - - S ko:K02426 - ko00000 Fe-S metabolism
NBIPMDDE_02640 1.13e-247 - - - S - - - Glutamine cyclotransferase
NBIPMDDE_02641 0.0 - 3.4.13.19 - E ko:K01273,ko:K01274 - ko00000,ko00537,ko01000,ko01002,ko04147 Membrane dipeptidase (Peptidase family M19)
NBIPMDDE_02642 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NBIPMDDE_02644 1.94e-50 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
NBIPMDDE_02646 2.95e-80 - - - S - - - Protein of unknown function (DUF2721)
NBIPMDDE_02647 7.98e-166 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
NBIPMDDE_02649 7.22e-106 - - - - - - - -
NBIPMDDE_02650 0.0 - 1.2.1.21, 1.2.1.22 - C ko:K07248 ko00620,ko00630,ko01120,map00620,map00630,map01120 ko00000,ko00001,ko01000 Aldehyde dehydrogenase family
NBIPMDDE_02651 2.85e-114 hndA 1.12.1.3 - C ko:K18330 - ko00000,ko01000 Thioredoxin-like [2Fe-2S] ferredoxin
NBIPMDDE_02652 0.0 hndD 1.12.1.3, 1.17.1.9 - C ko:K00123,ko:K18332 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 ko00000,ko00001,ko01000 Iron hydrogenase small subunit
NBIPMDDE_02653 0.0 nuoF 1.12.1.3, 1.6.5.3 - C ko:K00335,ko:K18331 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
NBIPMDDE_02654 1.13e-89 - 1.12.1.3 - C ko:K17992 - ko00000,ko01000 Ferredoxin
NBIPMDDE_02655 6.42e-180 cysE 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Serine acetyltransferase
NBIPMDDE_02656 1.84e-218 - - - E - - - N-terminus of Esterase_SGNH_hydro-type
NBIPMDDE_02657 1.4e-194 lipB 3.1.4.55 - S ko:K06167 ko00440,map00440 ko00000,ko00001,ko01000 Metallo-beta-lactamase superfamily
NBIPMDDE_02658 5.56e-246 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
NBIPMDDE_02660 6.07e-59 - - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 regulation of translation
NBIPMDDE_02661 2.71e-152 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 uracil phosphoribosyltransferase
NBIPMDDE_02662 0.0 - - - T - - - PAS domain
NBIPMDDE_02663 1.71e-282 - - - C - - - Domain of Unknown Function (DUF1080)
NBIPMDDE_02665 0.0 - - - MU - - - Efflux transporter, outer membrane factor
NBIPMDDE_02666 0.0 - - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_02667 3.6e-265 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Biotin-lipoyl like
NBIPMDDE_02670 0.0 bepE_1 - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_02671 2.55e-252 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBIPMDDE_02672 0.0 - 3.1.3.1 - P ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 Belongs to the alkaline phosphatase family
NBIPMDDE_02673 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NBIPMDDE_02674 1.45e-55 - - - S - - - TPR repeat
NBIPMDDE_02675 4.88e-195 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
NBIPMDDE_02676 1.96e-295 fprA 1.6.3.4 - C ko:K22405 - ko00000,ko01000 Metallo-beta-lactamase domain protein
NBIPMDDE_02677 2.1e-213 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NBIPMDDE_02678 3.6e-211 ddh 1.4.1.16 - E ko:K03340 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
NBIPMDDE_02680 2.15e-153 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
NBIPMDDE_02681 1.64e-299 - - - S ko:K02238 - ko00000,ko00002,ko02044 ComEC Rec2-related protein
NBIPMDDE_02682 4.4e-260 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 domain protein
NBIPMDDE_02683 4.41e-137 - - - S - - - Domain of unknown function (DUF4827)
NBIPMDDE_02684 0.0 glmM 5.4.2.8 - G ko:K01840 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucosamine mutase
NBIPMDDE_02685 0.0 - - - S - - - C-terminal domain of CHU protein family
NBIPMDDE_02686 3e-252 - - - S - - - Peptidase family M28
NBIPMDDE_02688 1.56e-126 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
NBIPMDDE_02689 1.98e-188 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
NBIPMDDE_02690 1.27e-292 - - - M - - - Phosphate-selective porin O and P
NBIPMDDE_02691 5.89e-258 - - - - - - - -
NBIPMDDE_02692 9.77e-152 - - - S - - - Metal dependent phosphohydrolases with conserved 'HD' motif.
NBIPMDDE_02693 4.26e-199 nifJ 1.2.7.1 - C ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
NBIPMDDE_02694 5.9e-144 - - - C - - - Nitroreductase family
NBIPMDDE_02695 0.0 - - - P - - - Outer membrane protein beta-barrel family
NBIPMDDE_02696 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
NBIPMDDE_02697 0.0 aslA - - P - - - Type I phosphodiesterase / nucleotide pyrophosphatase
NBIPMDDE_02698 1.82e-256 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
NBIPMDDE_02699 1.4e-233 metF 1.5.1.20 - C ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
NBIPMDDE_02700 3.65e-252 ilvE 2.6.1.42 - EH ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Branched-chain amino acid aminotransferase
NBIPMDDE_02701 1.65e-276 - - - S ko:K07133 - ko00000 ATPase (AAA
NBIPMDDE_02702 1.78e-111 - - - P - - - nitrite reductase [NAD(P)H] activity
NBIPMDDE_02703 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
NBIPMDDE_02704 5.05e-93 - - - E - - - oxidoreductase activity, acting on CH-OH group of donors
NBIPMDDE_02705 1.51e-147 pyrE 2.4.2.10, 4.1.1.23 - F ko:K00762,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NBIPMDDE_02706 5.85e-158 comF 2.4.2.14 - S ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Phosphoribosyl transferase domain
NBIPMDDE_02707 3.49e-108 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
NBIPMDDE_02708 2.78e-200 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
NBIPMDDE_02709 4.6e-248 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NBIPMDDE_02710 0.0 - - - S ko:K06158 - ko00000,ko03012 glycosyl transferase family 2
NBIPMDDE_02711 0.0 - - - M - - - Domain of unknown function (DUF3943)
NBIPMDDE_02712 4.19e-140 yadS - - S - - - membrane
NBIPMDDE_02713 1.2e-261 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
NBIPMDDE_02714 8.12e-197 vicX - - S - - - metallo-beta-lactamase
NBIPMDDE_02718 6.97e-152 infB - - M ko:K02519,ko:K03832 - ko00000,ko02000,ko03012,ko03029 energy transducer activity
NBIPMDDE_02719 1.64e-119 - - - S - - - Psort location CytoplasmicMembrane, score
NBIPMDDE_02720 0.0 - - - S - - - Phage minor structural protein
NBIPMDDE_02722 2e-75 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_02723 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
NBIPMDDE_02724 6.08e-224 - - - PT - - - COG3712 Fe2 -dicitrate sensor, membrane component
NBIPMDDE_02725 1.48e-134 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_02726 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NBIPMDDE_02727 2.43e-284 degT - - E - - - Belongs to the DegT DnrJ EryC1 family
NBIPMDDE_02728 1.48e-254 - 1.1.1.335 - S ko:K13016 ko00520,map00520 ko00000,ko00001,ko01000,ko01005 Oxidoreductase, NAD-binding domain protein
NBIPMDDE_02729 1.62e-105 lrp - - K ko:K03719,ko:K05800 - ko00000,ko03000,ko03036 helix_turn_helix ASNC type
NBIPMDDE_02730 8.96e-310 metY 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 O-acetylhomoserine aminocarboxypropyltransferase
NBIPMDDE_02731 0.0 htpG - - O ko:K04079 ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418 ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147 Molecular chaperone HSP90
NBIPMDDE_02732 0.0 - - - E ko:K03307 - ko00000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NBIPMDDE_02733 3.74e-243 - - - S - - - Methane oxygenase PmoA
NBIPMDDE_02734 2.82e-162 sdhC - - S ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002 fumarate reductase
NBIPMDDE_02735 0.0 sdhA 1.3.5.1, 1.3.5.4 - C ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 ko00000,ko00001,ko00002,ko01000 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556
NBIPMDDE_02736 1.45e-182 frdB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 succinate dehydrogenase
NBIPMDDE_02739 1.18e-250 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NBIPMDDE_02740 5.61e-299 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase class I and II
NBIPMDDE_02741 1.04e-160 - - - M - - - Protein of unknown function (DUF3737)
NBIPMDDE_02742 5.11e-54 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
NBIPMDDE_02743 4.98e-48 - - - S - - - Carboxymuconolactone decarboxylase family
NBIPMDDE_02744 5.09e-109 - - - S - - - Antibiotic biosynthesis monooxygenase
NBIPMDDE_02745 2.06e-220 - - - K - - - Transcriptional regulator
NBIPMDDE_02746 1.93e-204 - - - K - - - Transcriptional regulator
NBIPMDDE_02747 0.0 - - - S ko:K07079 - ko00000 Aldo/keto reductase family
NBIPMDDE_02748 0.0 yccM - - C - - - 4Fe-4S binding domain
NBIPMDDE_02749 1.08e-215 xynZ - - S - - - Putative esterase
NBIPMDDE_02750 7.41e-227 panE 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NBIPMDDE_02751 1.03e-204 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
NBIPMDDE_02752 3.01e-131 - - - I - - - Acid phosphatase homologues
NBIPMDDE_02755 0.0 - - - MU - - - Outer membrane efflux protein
NBIPMDDE_02756 0.0 - - - T ko:K02481 - ko00000,ko02022 Sigma-54 interaction domain
NBIPMDDE_02760 4.82e-277 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
NBIPMDDE_02761 1.73e-297 - - - V - - - COG0534 Na -driven multidrug efflux pump
NBIPMDDE_02762 4.09e-250 gldB - - O - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_02763 0.0 - - - S - - - ATPases associated with a variety of cellular activities
NBIPMDDE_02765 0.0 - - - S - - - Psort location
NBIPMDDE_02766 0.0 - 4.1.1.3, 6.4.1.1 - C ko:K01571,ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko02000 Conserved carboxylase domain
NBIPMDDE_02768 8.54e-270 - - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
NBIPMDDE_02769 2.55e-212 tatC - - U ko:K03118 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NBIPMDDE_02770 1.64e-35 tatA - - U ko:K03116 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
NBIPMDDE_02771 9.15e-207 fabD 2.3.1.39 - I ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 malonyl CoA-acyl carrier protein transacylase
NBIPMDDE_02772 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
NBIPMDDE_02773 4.6e-244 mgtE - - P ko:K06213 - ko00000,ko02000 Acts as a magnesium transporter
NBIPMDDE_02774 1.36e-211 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
NBIPMDDE_02775 3.34e-243 - - - S ko:K07027 - ko00000,ko02000 Lysylphosphatidylglycerol synthase TM region
NBIPMDDE_02776 0.0 - - - E ko:K01270 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Catalyzes the hydrolysis of Xaa-His dipeptides
NBIPMDDE_02777 0.0 - - - L - - - helicase superfamily c-terminal domain
NBIPMDDE_02778 0.0 - - - P ko:K07787,ko:K15726 ko02020,map02020 ko00000,ko00001,ko02000 AcrB/AcrD/AcrF family
NBIPMDDE_02780 0.0 - - - - - - - -
NBIPMDDE_02781 0.0 - - - S - - - NPCBM/NEW2 domain
NBIPMDDE_02782 8.57e-220 cysE 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Serine acetyltransferase
NBIPMDDE_02783 9.68e-119 - - - S ko:K07005 - ko00000 Pfam:Pyridox_oxidase
NBIPMDDE_02784 8.94e-118 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Alpha-L-rhamnosidase N-terminal domain protein
NBIPMDDE_02785 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
NBIPMDDE_02786 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
NBIPMDDE_02787 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NBIPMDDE_02788 8.49e-105 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NBIPMDDE_02789 4.46e-72 ypjD - - S - - - MazG nucleotide pyrophosphohydrolase domain
NBIPMDDE_02790 1.83e-206 deoC 4.1.2.4 - F ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NBIPMDDE_02791 4.14e-111 - - - T - - - PAS domain S-box protein
NBIPMDDE_02792 2.45e-287 fucP - - G ko:K02429 - ko00000,ko02000 Major Facilitator Superfamily
NBIPMDDE_02793 9.65e-218 - - - G - - - pfkB family carbohydrate kinase
NBIPMDDE_02794 2.01e-122 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
NBIPMDDE_02795 1.03e-225 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_02797 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NBIPMDDE_02798 1.13e-274 - - - S - - - Tetratricopeptide repeat protein
NBIPMDDE_02800 1.28e-312 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NBIPMDDE_02801 9.45e-261 yvaA 1.1.1.371 - S ko:K16044 ko00562,ko01120,map00562,map01120 ko00000,ko00001,ko01000 Oxidoreductase family, C-terminal alpha/beta domain
NBIPMDDE_02802 0.000885 - - - - - - - -
NBIPMDDE_02804 9.83e-260 - 2.7.13.3 - T ko:K11527 - ko00000,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
NBIPMDDE_02805 0.0 - - - G - - - Alpha-L-arabinofuranosidase C-terminal domain
NBIPMDDE_02806 1.15e-195 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
NBIPMDDE_02807 6.1e-66 - - - J - - - Threonyl and Alanyl tRNA synthetase second additional domain
NBIPMDDE_02808 1.67e-225 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
NBIPMDDE_02809 4.14e-175 yxlF_1 - - V ko:K01990 - ko00000,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
NBIPMDDE_02810 4.34e-271 - - - S - - - NPCBM-associated, NEW3 domain of alpha-galactosidase
NBIPMDDE_02811 6.61e-293 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
NBIPMDDE_02814 2.63e-287 - - - S - - - Acyltransferase family
NBIPMDDE_02815 2.37e-185 msrA 1.8.4.11, 1.8.4.12 - O ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NBIPMDDE_02816 2.42e-282 - - - S ko:K07148 - ko00000 Protein of unknown function (DUF418)
NBIPMDDE_02818 3.83e-102 - - - O - - - Thioredoxin
NBIPMDDE_02819 1.2e-106 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
NBIPMDDE_02821 1.95e-179 - - - V - - - COG0534 Na -driven multidrug efflux pump
NBIPMDDE_02822 3.48e-304 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NBIPMDDE_02823 3.76e-213 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NBIPMDDE_02824 1.11e-264 - - - M ko:K07282 - ko00000 Bacterial capsule synthesis protein
NBIPMDDE_02828 5.73e-263 - - - S - - - Major fimbrial subunit protein (FimA)
NBIPMDDE_02830 4.16e-283 - - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
NBIPMDDE_02831 1.36e-265 - - - S - - - amine dehydrogenase activity
NBIPMDDE_02832 0.0 - - - H - - - TonB-dependent receptor
NBIPMDDE_02833 0.0 - - - P - - - Outer membrane protein beta-barrel family
NBIPMDDE_02834 2.29e-119 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
NBIPMDDE_02835 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
NBIPMDDE_02836 7.99e-253 corA - - P ko:K03284 - ko00000,ko02000 Mediates influx of magnesium ions
NBIPMDDE_02837 1.26e-139 - - - L - - - Resolvase, N terminal domain
NBIPMDDE_02839 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NBIPMDDE_02840 6.08e-131 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
NBIPMDDE_02841 5.27e-197 - - - S - - - Protein of unknown function (DUF3822)
NBIPMDDE_02842 3.57e-144 - - - S - - - COG NOG19144 non supervised orthologous group
NBIPMDDE_02843 0.0 ahpF - - C ko:K03387 - ko00000,ko01000 NADH dehydrogenase
NBIPMDDE_02844 1.74e-136 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 alkyl hydroperoxide reductase
NBIPMDDE_02845 1.71e-58 - - - S - - - Domain of unknown function (DUF4884)
NBIPMDDE_02846 3.17e-176 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NBIPMDDE_02848 0.0 - - - G - - - Domain of Unknown Function (DUF1080)
NBIPMDDE_02849 8.85e-76 - - - - - - - -
NBIPMDDE_02850 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
NBIPMDDE_02851 1.05e-40 - - - O ko:K09132 - ko00000 HEPN domain
NBIPMDDE_02852 5.85e-158 - - - S - - - B3/4 domain
NBIPMDDE_02853 9.99e-40 - - - S - - - Winged helix-turn-helix domain (DUF2582)
NBIPMDDE_02854 3.23e-59 - - - S - - - Psort location Cytoplasmic, score 8.96
NBIPMDDE_02855 2.89e-57 - - - D ko:K09888 - ko00000,ko03036 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
NBIPMDDE_02856 0.0 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
NBIPMDDE_02857 7.14e-142 fahA - - Q - - - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
NBIPMDDE_02858 1.51e-153 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
NBIPMDDE_02860 0.0 - - - S - - - Domain of unknown function (DUF4270)
NBIPMDDE_02861 2.85e-208 glgA 2.4.1.21 GT5 G ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000,ko01003 synthase
NBIPMDDE_02862 1.47e-205 panC 6.3.2.1 - H ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
NBIPMDDE_02863 7.88e-79 panD 4.1.1.11 - H ko:K01579 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
NBIPMDDE_02865 0.0 prc 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
NBIPMDDE_02866 2.17e-224 - - - G - - - Kinase, PfkB family
NBIPMDDE_02867 2.4e-258 - - - S - - - Alpha/beta hydrolase family
NBIPMDDE_02868 1.85e-287 - - - C - - - related to aryl-alcohol
NBIPMDDE_02869 9.33e-223 - - - K - - - transcriptional regulator (AraC family)
NBIPMDDE_02870 1.59e-243 - - - S - - - TolB-like 6-blade propeller-like
NBIPMDDE_02872 1.07e-263 - - - K - - - Transcriptional regulator
NBIPMDDE_02873 0.0 mltD - - M ko:K08307 - ko00000,ko01000,ko01011 transglycosylase
NBIPMDDE_02874 1.91e-183 - - - S - - - Psort location CytoplasmicMembrane, score
NBIPMDDE_02875 2.7e-200 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
NBIPMDDE_02876 5.56e-142 - - - E - - - haloacid dehalogenase-like hydrolase
NBIPMDDE_02877 6.66e-196 - - - H - - - UbiA prenyltransferase family
NBIPMDDE_02878 1.07e-282 porV - - I - - - Psort location OuterMembrane, score
NBIPMDDE_02879 5.13e-288 pepQ 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 peptidase M24
NBIPMDDE_02880 2.51e-198 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Peptidase family M48
NBIPMDDE_02881 5.79e-120 lemA - - S ko:K03744 - ko00000 LemA family
NBIPMDDE_02882 7.83e-140 yigZ - - S - - - YigZ family
NBIPMDDE_02883 1.75e-47 - - - - - - - -
NBIPMDDE_02884 0.0 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
NBIPMDDE_02886 0.0 - - - G - - - Glycosyl hydrolase family 92
NBIPMDDE_02888 7.82e-80 - - - S - - - Thioesterase family
NBIPMDDE_02889 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NBIPMDDE_02890 0.0 - - - MU ko:K18139,ko:K18300 ko01501,ko02024,map01501,map02024 ko00000,ko00001,ko00002,ko01504,ko02000 Outer membrane efflux protein
NBIPMDDE_02891 4.78e-218 - - - I - - - alpha/beta hydrolase fold
NBIPMDDE_02892 0.0 - - - P - - - Type I phosphodiesterase / nucleotide pyrophosphatase
NBIPMDDE_02893 2.34e-114 - - - S - - - Oxidoreductase, short chain dehydrogenase reductase family
NBIPMDDE_02894 0.0 - - - E ko:K03294 - ko00000 C-terminus of AA_permease
NBIPMDDE_02897 0.0 mltF - - M ko:K18691 - ko00000,ko01000,ko01011 Transglycosylase SLT domain
NBIPMDDE_02898 0.0 rumA 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NBIPMDDE_02899 8.06e-175 - - - S - - - Outer membrane protein beta-barrel domain
NBIPMDDE_02900 7.99e-142 - - - S - - - flavin reductase
NBIPMDDE_02901 5.07e-108 pyrI - - F ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002 Involved in allosteric regulation of aspartate carbamoyltransferase
NBIPMDDE_02902 7.93e-219 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
NBIPMDDE_02904 2.45e-122 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
NBIPMDDE_02905 6.2e-285 - - - PT - - - Domain of unknown function (DUF4974)
NBIPMDDE_02906 3.63e-135 - - - - - - - -
NBIPMDDE_02911 4.97e-92 rlmL - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)