Genome ID:GCA_021991685.1
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PCFPDMBM_1 | 454765 | 455199 | Escherichia coli AcrAB-TolC with MarR mutations conferring resistance to ciprofloxacin and tetracycline | ARO:3003378 | Ecol_MarR_MULT | 86.11 | 100.00 | U00096.1 |
| PCFPDMBM_1 | 454363 | 454746 | marA | ARO:3000263 | marA | 93.70 | 100.00 | AP009048.1 |
| PCFPDMBM_12 | 424667 | 427807 | acrB | ARO:3000216 | acrB | 92.54 | 99.71 | U00096.3 |
| PCFPDMBM_12 | 423451 | 424644 | Shigella flexneri acrA | ARO:3007509 | Sfle_acrA | 85.64 | 100.00 | NC_004337.2 |
| PCFPDMBM_12 | 422655 | 423308 | Escherichia coli AcrAB-TolC with AcrR mutation conferring resistance to ciprofloxacin, tetracycline, and ceftazidime | ARO:3003807 | Ecol_AcrR_MULT | 84.21 | 100.93 | U00096.3 |
| PCFPDMBM_1 | 317713 | 318042 | Klebsiella pneumoniae KpnF | ARO:3004583 | Kpne_KpnF | 87.16 | 100.00 | AP006725.1 |
| PCFPDMBM_1 | 317364 | 317726 | Klebsiella pneumoniae KpnE | ARO:3004580 | Kpne_KpnE | 82.50 | 100.00 | AP006725.1 |
| PCFPDMBM_34 | 263811 | 264341 | emrR | ARO:3000516 | emrR | 93.14 | 100.00 | U00096.3 |
| PCFPDMBM_34 | 260950 | 262497 | emrB | ARO:3000074 | emrB | 93.07 | 100.59 | U00096.1 |
| PCFPDMBM_34 | 253076 | 253261 | rsmA | ARO:3005069 | rsmA | 85.25 | 100.00 | AF061757.1 |
| PCFPDMBM_38 | 172148 | 172573 | FosA8 | ARO:3007371 | FosA8 | 92.81 | 100.00 | MN150127.1 |
| PCFPDMBM_3 | 137573 | 138298 | baeR | ARO:3000828 | baeR | 97.08 | 100.42 | CP001918.1 |
| PCFPDMBM_3 | 136173 | 137576 | baeS | ARO:3000829 | baeS | 91.65 | 100.00 | CP001918.1 |
| PCFPDMBM_4 | 134143 | 134775 | CRP | ARO:3000518 | CRP | 99.05 | 100.00 | AP009048.1 |
| PCFPDMBM_3 | 131684 | 134761 | mdtC | ARO:3000794 | mdtC | 91.89 | 100.00 | U00096.1 |
| PCFPDMBM_3 | 128558 | 131683 | mdtB | ARO:3000793 | mdtB | 90.09 | 100.10 | U00096.1 |
| PCFPDMBM_37 | 128092 | 129840 | msbA | ARO:3003950 | msbA | 94.16 | 100.00 | U00096.3 |
| PCFPDMBM_33 | 127144 | 130257 | acrD | ARO:3000491 | acrD | 92.46 | 100.00 | AP009048.1 |
| PCFPDMBM_35 | 85628 | 87019 | Escherichia coli UhpT with mutation conferring resistance to fosfomycin | ARO:3003890 | Ecol_UhpT_FOF | 93.74 | 100.00 | HG738867.1 |
| PCFPDMBM_8 | 70489 | 71307 | bacA | ARO:3002986 | bacA | 93.77 | 99.63 | U00096.3 |
| PCFPDMBM_12 | 30403 | 31638 | Escherichia coli mdfA | ARO:3001328 | Ecol_mdfA | 86.49 | 100.24 | JQ394987.1 |
| PCFPDMBM_16 | 3336 | 4196 | TEM-1 | ARO:3000873 | TEM-1 | 100.00 | 100.00 | AL513383.1 |
| PCFPDMBM_19 | 1269 | 2084 | sul2 | ARO:3000412 | sul2 | 100.00 | 100.00 | AY055428.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PCFPDMBM_16 | 3336 | 4196 | blaTEM-1B | Amoxicillin, Ampicillin, Cephalothin, Piperacillin, Ticarcillin | 100.00 | 100.00 | AY458016 |
| PCFPDMBM_19 | 1269 | 2084 | sul2 | Sulfamethoxazole | 100.00 | 100.00 | AY034138 |
| PCFPDMBM_22 | 122 | 455 | fosA7 | Fosfomycin | 92.22 | 78.96 | LAPJ01000014 |
| PCFPDMBM_38 | 172158 | 172573 | fosA | Fosfomycin | 81.24 | 96.48 | AEXB01000013 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PCFPDMBM_16 | 3339 | 4196 | blaTEM-1 | broad-spectrum class A beta-lactamase TEM-1 | ALLELEX | 100.00 | 100.00 | WP_000027057.1 |
| PCFPDMBM_19 | 1269 | 2081 | sul2 | sulfonamide-resistant dihydropteroate synthase Sul2 | EXACTX | 100.00 | 100.00 | WP_001043260.1 |
| PCFPDMBM_38 | 172157 | 172573 | fosA8 | FosA8 family fosfomycin resistance glutathione transferase | BLASTX | 92.81 | 98.58 | WP_063277905.1 |
| PCFPDMBM_22 | 123 | 455 | fosA7 | FosA7 family fosfomycin resistance glutathione transferase | INTERNAL_STOP | 90.99 | 79.29 | WP_023216493.1 |