Probiotic potential risk score


ARGs VFs PGs PPRS
2002.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
DJPKGDOB_8531695088tet(O)ARO:3000190tet(O)97.81100.00M18896.2
DJPKGDOB_8518793117tet(40)ARO:3000567tet(40)99.51101.48AM419751.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
DJPKGDOB_8518793099tet(40)Doxycycline, Tetracycline99.84100.00AM419751
DJPKGDOB_8531695088tet(O)Doxycycline, Tetracycline, Minocycline99.43100.00M20925

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
DJPKGDOB_8518823099tet(40)tetracycline efflux MFS transporter Tet(40)BLASTX99.75100.00WP_015573055.1
DJPKGDOB_8531725088tet(O)tetracycline resistance ribosomal protection protein Tet(O)BLASTX99.37100.00WP_014636291.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
DJPKGDOB_241.00.01.0
DJPKGDOB_251.00.01.0
DJPKGDOB_261.00.01.0
DJPKGDOB_271.00.01.0
DJPKGDOB_291.00.01.0
DJPKGDOB_300.01.00.0
DJPKGDOB_311.00.01.0
DJPKGDOB_321.00.01.0
DJPKGDOB_331.00.01.0
DJPKGDOB_340.01.00.0
DJPKGDOB_350.01.00.0
DJPKGDOB_361.00.01.0
DJPKGDOB_371.00.01.0
DJPKGDOB_380.01.00.0
DJPKGDOB_390.01.00.0
DJPKGDOB_401.00.01.0
DJPKGDOB_410.01.00.0
DJPKGDOB_420.01.00.0
DJPKGDOB_430.01.00.0
DJPKGDOB_440.01.00.0
DJPKGDOB_451.00.01.0
DJPKGDOB_460.01.00.0
DJPKGDOB_471.00.01.0
DJPKGDOB_480.01.00.0
DJPKGDOB_491.00.01.0
DJPKGDOB_501.00.01.0
DJPKGDOB_510.01.00.0
DJPKGDOB_520.01.00.0
DJPKGDOB_530.01.00.0
DJPKGDOB_540.01.00.0
DJPKGDOB_550.01.00.0
DJPKGDOB_560.01.00.0
DJPKGDOB_571.00.01.0
DJPKGDOB_580.01.00.0
DJPKGDOB_590.01.00.0
DJPKGDOB_601.00.01.0
DJPKGDOB_610.01.00.0
DJPKGDOB_620.01.00.0
DJPKGDOB_630.01.00.0
DJPKGDOB_640.01.00.0
DJPKGDOB_650.01.00.0
DJPKGDOB_660.01.00.0
DJPKGDOB_670.01.00.0
DJPKGDOB_680.01.00.0
DJPKGDOB_690.01.00.0
DJPKGDOB_701.00.01.0
DJPKGDOB_710.01.00.0
DJPKGDOB_720.01.00.0
DJPKGDOB_730.01.00.0
DJPKGDOB_740.01.00.0
DJPKGDOB_750.01.00.0
DJPKGDOB_760.01.00.0
DJPKGDOB_770.01.00.0
DJPKGDOB_780.01.00.0
DJPKGDOB_790.01.00.0
DJPKGDOB_800.01.00.0
DJPKGDOB_810.01.00.0
DJPKGDOB_820.01.00.0
DJPKGDOB_830.01.00.0
DJPKGDOB_840.01.00.0
DJPKGDOB_850.01.00.0
DJPKGDOB_860.01.00.0
DJPKGDOB_870.01.00.0
DJPKGDOB_880.01.00.0
DJPKGDOB_890.01.00.0
DJPKGDOB_900.01.00.0
DJPKGDOB_910.01.00.0
DJPKGDOB_920.01.00.0
DJPKGDOB_930.01.00.0
DJPKGDOB_940.01.00.0
DJPKGDOB_950.01.00.0
DJPKGDOB_960.01.00.0
DJPKGDOB_970.01.00.0
DJPKGDOB_980.01.00.0
DJPKGDOB_990.01.00.0
DJPKGDOB_1000.01.00.0
DJPKGDOB_1010.01.00.0
DJPKGDOB_1020.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
DJPKGDOB_906505890552FalseSiphoviridaeVOG0641,
DJPKGDOB_10125545409FalseUnknownVOG9339,
DJPKGDOB_1013149643509FalseMyoviridaeVOG5872,
DJPKGDOB_101238715251938FalseUnknownVOG0221,

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements