Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KIEDLMPG_52 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_53 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_54 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_55 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_56 | 1.0 | 0.0 | 1.0 |
| KIEDLMPG_57 | 1.0 | 0.0 | 1.0 |
| KIEDLMPG_58 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_59 | 1.0 | 0.0 | 1.0 |
| KIEDLMPG_60 | 1.0 | 0.0 | 1.0 |
| KIEDLMPG_61 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_62 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_64 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_65 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_66 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_67 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_68 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_69 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_70 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_71 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_72 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_73 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_74 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_75 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_76 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_77 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_78 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_79 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_80 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_81 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_82 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_83 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_84 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_85 | 0.0 | 1.0 | 0.0 |
| KIEDLMPG_86 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KIEDLMPG_83 | 10873 | 31327 | False | Siphoviridae | VOG4545, VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG9761, VOG4581, VOG4841, VOG0198 |
| KIEDLMPG_84 | 319147 | 349931 | False | Myoviridae | VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4865, VOG1915, VOG6932, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG1352, VOG4699, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG8168, VOG5763, VOG10749, VOG9945, VOG4705 |
Phigaro v2.4.0 (Database: Jan. 2024 release)