Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GCONFALN_31 | 0.0 | 1.0 | 0.0 |
| GCONFALN_32 | 0.0 | 1.0 | 0.0 |
| GCONFALN_34 | 1.0 | 0.0 | 1.0 |
| GCONFALN_35 | 1.0 | 0.0 | 1.0 |
| GCONFALN_36 | 1.0 | 0.0 | 1.0 |
| GCONFALN_37 | 1.0 | 0.0 | 1.0 |
| GCONFALN_38 | 1.0 | 0.0 | 1.0 |
| GCONFALN_39 | 1.0 | 0.0 | 1.0 |
| GCONFALN_40 | 1.0 | 0.0 | 1.0 |
| GCONFALN_41 | 0.0 | 1.0 | 0.0 |
| GCONFALN_42 | 1.0 | 0.0 | 1.0 |
| GCONFALN_43 | 1.0 | 0.0 | 1.0 |
| GCONFALN_44 | 0.0 | 1.0 | 0.0 |
| GCONFALN_45 | 1.0 | 0.0 | 1.0 |
| GCONFALN_46 | 0.0 | 1.0 | 0.0 |
| GCONFALN_47 | 1.0 | 0.0 | 1.0 |
| GCONFALN_48 | 1.0 | 0.0 | 1.0 |
| GCONFALN_49 | 1.0 | 0.0 | 1.0 |
| GCONFALN_50 | 1.0 | 0.0 | 1.0 |
| GCONFALN_51 | 1.0 | 0.0 | 1.0 |
| GCONFALN_52 | 0.0 | 1.0 | 0.0 |
| GCONFALN_54 | 0.0 | 1.0 | 0.0 |
| GCONFALN_55 | 0.0 | 1.0 | 0.0 |
| GCONFALN_56 | 0.0 | 1.0 | 0.0 |
| GCONFALN_57 | 1.0 | 0.0 | 1.0 |
| GCONFALN_58 | 1.0 | 0.0 | 1.0 |
| GCONFALN_59 | 0.0 | 1.0 | 0.0 |
| GCONFALN_60 | 0.0 | 1.0 | 0.0 |
| GCONFALN_61 | 0.0 | 1.0 | 0.0 |
| GCONFALN_62 | 0.0 | 1.0 | 0.0 |
| GCONFALN_63 | 0.0 | 1.0 | 0.0 |
| GCONFALN_64 | 0.0 | 1.0 | 0.0 |
| GCONFALN_65 | 0.0 | 1.0 | 0.0 |
| GCONFALN_66 | 0.0 | 1.0 | 0.0 |
| GCONFALN_67 | 0.0 | 1.0 | 0.0 |
| GCONFALN_68 | 0.0 | 1.0 | 0.0 |
| GCONFALN_69 | 0.0 | 1.0 | 0.0 |
| GCONFALN_70 | 0.0 | 1.0 | 0.0 |
| GCONFALN_71 | 0.0 | 1.0 | 0.0 |
| GCONFALN_72 | 0.0 | 1.0 | 0.0 |
| GCONFALN_73 | 0.0 | 1.0 | 0.0 |
| GCONFALN_74 | 0.0 | 1.0 | 0.0 |
| GCONFALN_75 | 0.0 | 1.0 | 0.0 |
| GCONFALN_76 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GCONFALN_72 | 17929 | 29778 | False | Siphoviridae | VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG9761, VOG4581, VOG4841, VOG0198 |
| GCONFALN_72 | 81493 | 109545 | False | Myoviridae | VOG5334, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376 |
| GCONFALN_73 | 72901 | 99414 | False | Myoviridae | VOG9945, VOG4620, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6307, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG6932, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG0796, VOG0686 |
Phigaro v2.4.0 (Database: Jan. 2024 release)