Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NPGDIJPI_1 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_2 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_3 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_4 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_5 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_6 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_7 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_8 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_9 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_10 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_12 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_14 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_15 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_16 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_17 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_18 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_19 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_20 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_21 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_23 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_24 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_25 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_26 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_27 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_28 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_29 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_30 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_31 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_32 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_34 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_35 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_36 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_37 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_38 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_39 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_40 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_41 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_42 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_43 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_44 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_45 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_46 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_47 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_48 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_49 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_50 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_51 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_52 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_53 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_54 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_56 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_57 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_58 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_59 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_60 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_61 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_62 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_63 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_64 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_65 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_66 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_68 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_70 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_71 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_72 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_73 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_76 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_77 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_78 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_79 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_80 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_81 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_82 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_83 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_84 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_86 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_87 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_88 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_89 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_90 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_91 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_92 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_94 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_95 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_96 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_97 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_98 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_99 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_100 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_101 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_102 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_103 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_104 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_105 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_106 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_107 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_108 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_109 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_110 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_111 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_113 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_114 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_115 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_116 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_117 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_118 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_119 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_121 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_122 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_123 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_124 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_125 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_126 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_127 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_128 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_129 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_131 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_132 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_133 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_136 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_137 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_138 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_139 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_141 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_142 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_144 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_145 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_146 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_148 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_151 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_152 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_153 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_154 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_155 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_156 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_158 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_162 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_163 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_164 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_165 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_166 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_167 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_170 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_171 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_172 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_173 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_174 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_175 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_177 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_179 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_180 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_181 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_182 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_183 | 1.0 | 0.0 | 1.0 |
| NPGDIJPI_184 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_185 | 0.0 | 1.0 | 0.0 |
| NPGDIJPI_187 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NPGDIJPI_154 | 1446 | 26285 | False | Myoviridae | VOG0573, VOG1348, VOG1433, VOG1956, VOG6307, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG6932, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG0796, VOG0686, VOG0198, VOG8232, VOG8491 |
Phigaro v2.4.0 (Database: Jan. 2024 release)