Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NPBOEADN_35 | 95 | 983 | rep38 | 898 / 903 | 82.18 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NPBOEADN_1 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_2 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_4 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_5 | 1.0 | 0.0 | 1.0 |
| NPBOEADN_6 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_8 | 1.0 | 0.0 | 1.0 |
| NPBOEADN_10 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_11 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_12 | 1.0 | 0.0 | 1.0 |
| NPBOEADN_13 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_15 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_16 | 1.0 | 0.0 | 1.0 |
| NPBOEADN_17 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_18 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_19 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_20 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_21 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_22 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_24 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_25 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_27 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_28 | 1.0 | 0.0 | 1.0 |
| NPBOEADN_29 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_30 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_31 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_32 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_33 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_34 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_35 | 1.0 | 0.0 | 1.0 |
| NPBOEADN_36 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_37 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_38 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_39 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_40 | 1.0 | 0.0 | 1.0 |
| NPBOEADN_41 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_42 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_43 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_45 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_47 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_48 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_49 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_50 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_51 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_52 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_53 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_54 | 1.0 | 0.0 | 1.0 |
| NPBOEADN_56 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_57 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_58 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_59 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_60 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_61 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_62 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_63 | 1.0 | 0.0 | 1.0 |
| NPBOEADN_64 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_65 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_66 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_68 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_69 | 0.0 | 1.0 | 0.0 |
| NPBOEADN_70 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NPBOEADN_33 | 20050 | 23635 | False | Unknown | VOG6085, VOG6396 |
| NPBOEADN_41 | 1606 | 5289 | False | Unknown | VOG3424, VOG0703, VOG4824, VOG9998, VOG9474 |
| NPBOEADN_60 | 232489 | 262605 | False | Myoviridae | VOG0275, VOG0862, VOG9667, VOG0010, VOG8241, VOG9708, VOG0322, VOG4548, VOG6545, VOG4606, VOG0327, VOG6952, VOG0600, VOG6951, VOG0198, VOG0796, VOG5681, VOG0720, VOG4564, VOG4555, VOG4572, VOG4623, VOG3888, VOG1900, VOG4870, VOG5612, VOG3890, VOG3891, VOG3892, VOG5793, VOG4865, VOG4885, VOG3894, VOG9719, VOG4691 |
Phigaro v2.4.0 (Database: Jan. 2024 release)