Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AKHFACLO_5 | 54948 | 55319 | Mycobacterium tuberculosis rpsL mutations conferring resistance to Streptomycin | ARO:3003395 | Mtub_rpsL_STR | 82.93 | 99.19 | NC_000962.3 |
| AKHFACLO_2 | 1784 | 5416 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 91.30 | 102.02 | NC_008618.1 |
| AKHFACLO_87 | 177 | 3503 | Bifidobacterium bifidum ileS conferring resistance to mupirocin | ARO:3003730 | Bbif_ileS_MUP | 99.73 | 100.09 | CP001840.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AKHFACLO_1 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_2 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_3 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_4 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_5 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_6 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_7 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_8 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_9 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_10 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_11 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_12 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_13 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_14 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_15 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_16 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_17 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_18 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_19 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_20 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_21 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_22 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_23 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_24 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_25 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_26 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_27 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_28 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_29 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_30 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_31 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_33 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_34 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_35 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_36 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_37 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_38 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_39 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_40 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_41 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_43 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_44 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_45 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_46 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_47 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_48 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_51 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_52 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_53 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_54 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_55 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_56 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_57 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_59 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_60 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_61 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_62 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_63 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_64 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_65 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_66 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_67 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_68 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_69 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_70 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_71 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_72 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_73 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_74 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_75 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_76 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_77 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_78 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_79 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_80 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_81 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_82 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_83 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_84 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_86 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_87 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_88 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_89 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_90 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_92 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_93 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_94 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_96 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_97 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_100 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_101 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_102 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_103 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_104 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_106 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_107 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_108 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_109 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_112 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_113 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_114 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_115 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_116 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_117 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_119 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_121 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_123 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_124 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_125 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_126 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_128 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_129 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_131 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_133 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_135 | 1.0 | 0.0 | 1.0 |
| AKHFACLO_138 | 0.0 | 1.0 | 0.0 |
| AKHFACLO_140 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AKHFACLO_28 | 46848 | 56587 | False | Siphoviridae | VOG5601, VOG1581, VOG0880, VOG4553, VOG4576, VOG0720, VOG5101 |
| AKHFACLO_41 | 17278 | 24959 | False | Siphoviridae | VOG2090, VOG11075, VOG0585, VOG3304, VOG0010, VOG4602 |
Phigaro v2.4.0 (Database: Jan. 2024 release)