Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MEJKIHHF_43 | 145503 | 144925 | WalR | 1.21e-95 | transcriptional regulatory protein | 81.86 | 82.05 | EPH95667 |
| MEJKIHHF_29 | 50313 | 50116 | CspR | 9.25e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MEJKIHHF_1 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_2 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_3 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_4 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_5 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_6 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_7 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_8 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_9 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_10 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_11 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_12 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_13 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_14 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_15 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_16 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_17 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_18 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_19 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_20 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_21 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_22 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_23 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_24 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_25 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_26 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_27 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_28 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_29 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_30 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_31 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_32 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_33 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_34 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_35 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_36 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_37 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_38 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_39 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_40 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_41 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_42 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_43 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_44 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_45 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_46 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_47 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_48 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_50 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_51 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_52 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_53 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_54 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_55 | 0.0 | 1.0 | 0.0 |
| MEJKIHHF_56 | 1.0 | 0.0 | 1.0 |
| MEJKIHHF_57 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MEJKIHHF_29 | 2 | 29409 | False | Siphoviridae | VOG0703, VOG7017, VOG0861, VOG7896, VOG6455, VOG4599, VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG4570, VOG0198, VOG3643, VOG3643, VOG0152, VOG4567, VOG0536, VOG9860, VOG0189, VOG4566, VOG0186, VOG1309 |
| MEJKIHHF_44 | 17399 | 26647 | False | Siphoviridae | VOG4609, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204, VOG4589 |
Phigaro v2.4.0 (Database: Jan. 2024 release)