Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MOPDNBOG_64 | 13270 | 12566 | WalR | 3.20e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MOPDNBOG_31 | 14233 | 14430 | CspR | 2.31e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MOPDNBOG_1 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_2 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_3 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_4 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_5 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_6 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_7 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_8 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_9 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_10 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_11 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_12 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_13 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_14 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_15 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_16 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_17 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_18 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_19 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_20 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_21 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_22 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_23 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_24 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_25 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_26 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_27 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_28 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_29 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_30 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_31 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_32 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_33 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_34 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_35 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_36 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_37 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_38 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_39 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_40 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_41 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_42 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_43 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_44 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_45 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_46 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_47 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_48 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_49 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_50 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_51 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_52 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_53 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_54 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_55 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_56 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_57 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_58 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_59 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_60 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_61 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_62 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_63 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_64 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_65 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_66 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_67 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_68 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_69 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_70 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_71 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_72 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_73 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_74 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_75 | 0.0 | 1.0 | 0.0 |
| MOPDNBOG_76 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_77 | 1.0 | 0.0 | 1.0 |
| MOPDNBOG_78 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MOPDNBOG_29 | 107452 | 114000 | False | Siphoviridae | VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556 |
| MOPDNBOG_31 | 34588 | 69704 | False | Siphoviridae | VOG1309, VOG0186, VOG4566, VOG0189, VOG7018, VOG9860, VOG4693, VOG9741, VOG4237, VOG0152, VOG0044, VOG0044, VOG0198, VOG4570, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG7888, VOG0054, VOG4918, VOG4605 |
Phigaro v2.4.0 (Database: Jan. 2024 release)