Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EIOCMOGA_5 | 33378 | 34082 | WalR | 3.09e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| EIOCMOGA_11 | 71480 | 71283 | CspR | 5.09e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EIOCMOGA_1 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_2 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_3 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_4 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_5 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_6 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_7 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_8 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_9 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_10 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_11 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_12 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_13 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_14 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_15 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_16 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_17 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_18 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_19 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_20 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_21 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_22 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_23 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_24 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_25 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_26 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_27 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_28 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_29 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_30 | 1.0 | 0.0 | 1.0 |
| EIOCMOGA_31 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_32 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_33 | 0.0 | 1.0 | 0.0 |
| EIOCMOGA_34 | 1.0 | 0.0 | 1.0 |
| EIOCMOGA_35 | 1.0 | 0.0 | 1.0 |
| EIOCMOGA_37 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EIOCMOGA_6 | 38486 | 49359 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4606, VOG4632, VOG1581, VOG10397 |
| EIOCMOGA_11 | 15374 | 48404 | False | Siphoviridae | VOG4649, VOG0054, VOG7888, VOG4599, VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1887, VOG3434, VOG4555, VOG5616, VOG4564, VOG0720, VOG4544, VOG0796, VOG4549, VOG4570, VOG7136, VOG0198, VOG6815, VOG4693, VOG6623, VOG9860, VOG11003, VOG0226, VOG4566, VOG0186, VOG1309, VOG8241 |
Phigaro v2.4.0 (Database: Jan. 2024 release)