Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HBAMBNML_7 | 92697 | 93401 | WalR | 9.93e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| HBAMBNML_29 | 17095 | 17292 | CspR | 5.04e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HBAMBNML_1 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_2 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_3 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_4 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_5 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_6 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_7 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_8 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_9 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_10 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_11 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_12 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_13 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_14 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_15 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_16 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_17 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_18 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_19 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_20 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_21 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_22 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_23 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_24 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_25 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_26 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_27 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_28 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_29 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_30 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_31 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_32 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_33 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_34 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_35 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_36 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_37 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_38 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_39 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_40 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_41 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_42 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_43 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_44 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_45 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_46 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_47 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_48 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_49 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_50 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_51 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_52 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_53 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_54 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_55 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_56 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_57 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_58 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_59 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_60 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_61 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_62 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_63 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_64 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_66 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_67 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_68 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_69 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_70 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_71 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_72 | 0.0 | 1.0 | 0.0 |
| HBAMBNML_73 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_74 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_75 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_77 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_78 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_79 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_80 | 1.0 | 0.0 | 1.0 |
| HBAMBNML_81 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HBAMBNML_3 | 159740 | 179022 | False | Siphoviridae | VOG0703, VOG7017, VOG0861, VOG4599, VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796 |
| HBAMBNML_33 | 1490 | 26021 | False | Siphoviridae | VOG4918, VOG0703, VOG1637, VOG4705, VOG4599, VOG4605, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG5601, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG6947, VOG4549, VOG4570 |
Phigaro v2.4.0 (Database: Jan. 2024 release)