Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GMDMIAAI_2 | 52314 | 51610 | WalR | 1.07e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| GMDMIAAI_54 | 5025 | 4828 | CspR | 2.27e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GMDMIAAI_1 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_2 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_3 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_4 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_5 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_6 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_7 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_8 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_9 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_10 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_11 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_12 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_13 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_14 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_15 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_16 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_17 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_18 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_19 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_20 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_21 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_22 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_23 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_24 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_25 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_26 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_27 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_28 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_29 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_30 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_31 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_32 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_33 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_34 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_35 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_36 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_37 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_38 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_39 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_40 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_41 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_42 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_43 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_44 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_45 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_46 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_47 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_48 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_49 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_50 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_51 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_52 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_53 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_54 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_55 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_56 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_57 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_58 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_59 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_60 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_61 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_62 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_63 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_64 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_65 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_66 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_67 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_68 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_69 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_70 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_71 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_72 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_73 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_74 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_75 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_76 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_77 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_78 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_79 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_80 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_81 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_82 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_83 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_84 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_85 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_86 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_87 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_88 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_89 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_90 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_91 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_92 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_93 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_94 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_95 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_96 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_97 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_98 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_99 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_100 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_101 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_102 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_103 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_104 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_105 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_106 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_107 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_108 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_109 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_110 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_111 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_112 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_113 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_114 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_115 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_116 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_117 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_118 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_119 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_120 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_121 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_122 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_123 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_124 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_125 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_126 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_127 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_128 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_129 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_130 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_131 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_132 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_133 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_134 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_135 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_136 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_138 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_139 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_140 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_141 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_142 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_143 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_144 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_145 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_146 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_147 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_148 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_149 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_150 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_151 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_152 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_153 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_154 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_155 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_156 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_157 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_158 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_159 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_160 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_161 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_162 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_163 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_164 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_166 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_167 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_168 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_169 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_170 | 0.0 | 1.0 | 0.0 |
| GMDMIAAI_171 | 1.0 | 0.0 | 1.0 |
| GMDMIAAI_172 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GMDMIAAI_2 | 118712 | 129390 | False | Siphoviridae | VOG1581, VOG4632, VOG4609, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204, VOG4589 |
Phigaro v2.4.0 (Database: Jan. 2024 release)