Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AMCMEHBA_1 | 68204 | 67500 | WalR | 8.91e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| AMCMEHBA_17 | 333 | 530 | CspR | 5.24e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AMCMEHBA_170 | 3 | 888 | repUS74 | 888 / 1062 | 93.02 | CP000424 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AMCMEHBA_1 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_2 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_3 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_4 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_5 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_6 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_7 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_8 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_9 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_10 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_11 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_12 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_13 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_14 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_15 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_16 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_17 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_18 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_19 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_20 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_21 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_22 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_23 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_24 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_25 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_26 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_27 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_28 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_29 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_30 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_31 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_32 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_33 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_34 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_35 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_36 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_37 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_38 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_39 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_40 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_41 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_42 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_43 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_44 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_45 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_46 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_47 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_48 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_49 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_50 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_51 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_52 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_53 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_54 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_55 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_56 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_57 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_58 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_59 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_60 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_61 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_62 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_63 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_64 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_65 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_66 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_67 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_68 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_69 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_70 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_71 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_72 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_73 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_74 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_75 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_76 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_77 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_78 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_79 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_80 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_81 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_82 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_83 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_84 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_85 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_86 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_87 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_88 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_89 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_90 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_91 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_92 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_93 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_94 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_95 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_96 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_97 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_98 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_99 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_100 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_101 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_102 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_103 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_104 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_105 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_106 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_107 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_108 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_109 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_110 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_111 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_112 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_113 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_114 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_115 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_116 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_117 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_118 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_119 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_120 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_121 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_122 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_123 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_124 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_125 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_126 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_127 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_128 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_129 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_130 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_131 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_132 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_133 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_134 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_135 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_136 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_137 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_138 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_139 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_140 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_141 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_142 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_143 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_144 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_145 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_146 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_147 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_148 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_149 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_150 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_151 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_152 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_153 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_154 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_155 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_156 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_157 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_158 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_159 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_160 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_161 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_162 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_163 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_164 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_165 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_166 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_167 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_168 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_169 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_170 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_171 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_172 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_173 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_174 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_175 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_176 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_178 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_179 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_180 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_181 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_182 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_183 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_184 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_185 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_186 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_187 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_188 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_189 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_190 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_191 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_192 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_193 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_194 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_195 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_196 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_197 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_198 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_199 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_200 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_201 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_202 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_203 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_204 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_205 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_206 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_208 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_210 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_211 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_212 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_213 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_214 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_215 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_216 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_217 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_218 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_219 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_220 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_221 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_222 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_223 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_224 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_225 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_226 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_227 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_229 | 0.0 | 1.0 | 0.0 |
| AMCMEHBA_230 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_231 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_232 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_233 | 1.0 | 0.0 | 1.0 |
| AMCMEHBA_234 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AMCMEHBA_26 | 3792 | 10499 | False | Siphoviridae | VOG4609, VOG0205, VOG4581, VOG4544, VOG5051 |
Phigaro v2.4.0 (Database: Jan. 2024 release)