Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GLEDDEMB_10 | 20193 | 19489 | WalR | 6.05e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| GLEDDEMB_21 | 32506 | 32309 | CspR | 7.02e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| GLEDDEMB_58 | 6235 | 7293 | repUS75 | 1059 / 1059 | 100.00 | CP002393 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GLEDDEMB_1 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_2 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_3 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_4 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_5 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_6 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_7 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_8 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_9 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_10 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_11 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_12 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_13 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_14 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_15 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_16 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_17 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_18 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_19 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_20 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_21 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_22 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_23 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_24 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_25 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_26 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_27 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_28 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_29 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_30 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_31 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_32 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_33 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_34 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_35 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_36 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_37 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_38 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_39 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_40 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_41 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_42 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_43 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_44 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_45 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_46 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_47 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_48 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_49 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_50 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_51 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_52 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_53 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_54 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_55 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_56 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_57 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_58 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_59 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_60 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_61 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_62 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_63 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_64 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_65 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_66 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_67 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_68 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_69 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_70 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_71 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_72 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_73 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_74 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_75 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_76 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_78 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_79 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_80 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_82 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_83 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_84 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_85 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_86 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_87 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_88 | 0.0 | 1.0 | 0.0 |
| GLEDDEMB_90 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_91 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_92 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_93 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_94 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_95 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_96 | 1.0 | 0.0 | 1.0 |
| GLEDDEMB_97 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)