Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NBOLDAPK_73 | 160420 | 159716 | WalR | 1.38e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| NBOLDAPK_68 | 8983 | 9180 | CspR | 5.58e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NBOLDAPK_1 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_2 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_5 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_6 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_7 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_8 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_9 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_11 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_12 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_13 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_14 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_15 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_16 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_17 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_18 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_19 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_20 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_21 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_22 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_23 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_24 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_25 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_26 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_27 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_29 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_30 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_31 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_32 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_33 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_35 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_36 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_37 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_38 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_39 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_40 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_41 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_42 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_43 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_44 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_45 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_46 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_48 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_49 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_50 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_51 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_52 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_53 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_54 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_55 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_58 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_59 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_60 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_63 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_64 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_65 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_66 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_67 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_68 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_69 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_71 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_72 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_73 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_74 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_76 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_77 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_78 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_79 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_80 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_81 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_82 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_83 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_84 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_85 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_86 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_87 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_88 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_89 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_90 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_91 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_92 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_93 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_94 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_95 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_96 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_97 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_99 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_100 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_104 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_105 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_106 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_111 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_115 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_116 | 0.0 | 1.0 | 0.0 |
| NBOLDAPK_121 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_123 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_124 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_125 | 1.0 | 0.0 | 1.0 |
| NBOLDAPK_128 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NBOLDAPK_33 | 12798 | 16224 | False | Siphoviridae | VOG4605, VOG4918, VOG0703, VOG1637, VOG7896 |
| NBOLDAPK_44 | 1382 | 36370 | False | Siphoviridae | VOG0703, VOG1637, VOG7896, VOG4599, VOG4605, VOG6163, VOG5852, VOG5601, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556, VOG4844, VOG6947, VOG4549, VOG10904, VOG4570, VOG0198, VOG0044, VOG3643, VOG0152, VOG0152, VOG4643, VOG0275, VOG0195, VOG0536, VOG9860, VOG4566, VOG0226, VOG0322, VOG0321, VOG3642, VOG4967, VOG10867, VOG0181, VOG9748, VOG10059 |
| NBOLDAPK_68 | 28990 | 36077 | False | Siphoviridae | VOG8241, VOG1309, VOG0186, VOG4566, VOG6238, VOG1638, VOG8987, VOG11003, VOG9860, VOG0536, VOG9741 |
Phigaro v2.4.0 (Database: Jan. 2024 release)