Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JKLPDGII_2 | 28595 | 29299 | WalR | 1.05e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| JKLPDGII_36 | 13861 | 14058 | CspR | 3.67e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JKLPDGII_84 | 1341 | 2399 | repUS75 | 1059 / 1059 | 100.00 | CP002393 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JKLPDGII_1 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_2 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_3 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_4 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_5 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_6 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_7 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_8 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_9 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_10 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_11 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_12 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_13 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_14 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_15 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_16 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_17 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_18 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_19 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_20 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_21 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_22 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_23 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_24 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_25 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_26 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_27 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_28 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_29 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_30 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_31 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_32 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_33 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_34 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_35 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_36 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_37 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_38 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_39 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_40 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_41 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_42 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_43 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_44 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_45 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_46 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_47 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_48 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_49 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_50 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_51 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_52 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_53 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_54 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_55 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_56 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_57 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_58 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_59 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_60 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_61 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_62 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_63 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_64 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_65 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_66 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_67 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_68 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_69 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_70 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_71 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_72 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_73 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_74 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_75 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_76 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_77 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_78 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_79 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_80 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_81 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_82 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_83 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_84 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_85 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_86 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_87 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_88 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_89 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_90 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_91 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_92 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_93 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_94 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_95 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_96 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_97 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_98 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_99 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_100 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_101 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_102 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_103 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_104 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_105 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_106 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_107 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_108 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_109 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_110 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_111 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_112 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_113 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_114 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_115 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_116 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_117 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_118 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_119 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_120 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_121 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_122 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_124 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_125 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_126 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_127 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_129 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_130 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_131 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_132 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_133 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_134 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_135 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_136 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_137 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_138 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_139 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_140 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_141 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_142 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_143 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_144 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_145 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_146 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_148 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_149 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_150 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_151 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_152 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_153 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_155 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_156 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_157 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_158 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_159 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_160 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_161 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_162 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_163 | 0.0 | 1.0 | 0.0 |
| JKLPDGII_164 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_165 | 1.0 | 0.0 | 1.0 |
| JKLPDGII_166 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JKLPDGII_9 | 7817 | 17886 | False | Unknown | VOG9667, VOG6495, VOG1333, VOG4965, VOG6179, VOG11003, VOG11003, VOG6495, VOG7236, VOG8241, VOG1309, VOG0186, VOG4566, VOG0189 |
| JKLPDGII_9 | 19459 | 45921 | False | Siphoviridae | VOG3307, VOG0198, VOG4570, VOG3699, VOG4544, VOG0720, VOG4564, VOG5616, VOG1300, VOG4555, VOG3434, VOG1887, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG4705, VOG1637, VOG0703, VOG4918, VOG4605 |
Phigaro v2.4.0 (Database: Jan. 2024 release)