Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| INHNNJOO_4 | 188185 | 188889 | WalR | 1.14e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| INHNNJOO_85 | 1868 | 1674 | CspR | 3.87e-31 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| INHNNJOO_85 | 1868 | 1671 | CspA | 5.94e-31 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| INHNNJOO_1 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_2 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_3 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_4 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_5 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_6 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_7 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_8 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_9 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_11 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_12 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_13 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_14 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_15 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_16 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_17 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_18 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_19 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_20 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_21 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_22 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_23 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_24 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_25 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_26 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_27 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_28 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_30 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_31 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_32 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_33 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_34 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_35 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_36 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_37 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_39 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_40 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_41 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_42 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_43 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_44 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_45 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_46 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_47 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_48 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_49 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_50 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_51 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_52 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_53 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_54 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_55 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_56 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_57 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_58 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_59 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_60 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_61 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_62 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_63 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_64 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_65 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_66 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_67 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_68 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_69 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_70 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_71 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_72 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_73 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_75 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_76 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_77 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_78 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_79 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_80 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_81 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_82 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_83 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_84 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_85 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_86 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_87 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_88 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_90 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_91 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_93 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_97 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_98 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_100 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_101 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_104 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_105 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_107 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_108 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_109 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_113 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_114 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_115 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_117 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_119 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_121 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_123 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_128 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_132 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_133 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_137 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_144 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_153 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_156 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_165 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_166 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_170 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_175 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_181 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_182 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_192 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_194 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_201 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_202 | 0.0 | 1.0 | 0.0 |
| INHNNJOO_204 | 1.0 | 0.0 | 1.0 |
| INHNNJOO_208 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| INHNNJOO_2 | 69093 | 98796 | False | Siphoviridae | VOG5073, VOG0514, VOG4566, VOG0189, VOG6005, VOG0198, VOG4841, VOG0741, VOG7810, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG8239, VOG0207, VOG4586, VOG0209, VOG0660, VOG6163, VOG4605, VOG4599, VOG10957 |
| INHNNJOO_11 | 525 | 31164 | False | Siphoviridae | VOG4705, VOG0804, VOG9640, VOG8438, VOG1637, VOG3463, VOG4619, VOG0801, VOG4910, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG1329, VOG4555, VOG0692, VOG0691, VOG4544, VOG0796, VOG5616, VOG1183, VOG5709, VOG0198, VOG0044, VOG0586, VOG1298, VOG4693, VOG4552, VOG0189, VOG5046, VOG0186, VOG1309 |
| INHNNJOO_26 | 9900 | 37917 | False | Siphoviridae | VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG0044, VOG3643, VOG4673, VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG9997, VOG8917, VOG1637 |
| INHNNJOO_28 | 9640 | 19125 | False | Siphoviridae | VOG4632, VOG4609, VOG6414, VOG0205, VOG4841, VOG4581, VOG4544, VOG2935, VOG4556 |
Phigaro v2.4.0 (Database: Jan. 2024 release)