Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GCHDDLEI_43 | 13232 | 14134 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GCHDDLEI_43 | 13232 | 14134 | cepA | Unknown Beta-lactam | 100.00 | 100.00 | FR688022 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GCHDDLEI_43 | 13235 | 14134 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005816369.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GCHDDLEI_1 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_2 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_3 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_4 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_5 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_6 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_7 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_8 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_9 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_10 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_11 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_13 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_14 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_15 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_16 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_17 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_18 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_19 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_20 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_21 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_22 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_23 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_24 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_25 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_26 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_27 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_28 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_29 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_30 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_31 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_32 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_33 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_34 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_36 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_37 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_38 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_39 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_40 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_41 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_42 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_43 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_44 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_45 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_46 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_47 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_48 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_49 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_50 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_51 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_52 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_53 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_55 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_56 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_57 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_58 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_59 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_60 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_61 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_62 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_63 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_64 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_65 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_66 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_67 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_68 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_69 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_70 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_71 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_72 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_73 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_74 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_75 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_76 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_77 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_78 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_80 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_81 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_82 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_84 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_85 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_86 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_87 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_88 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_89 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_91 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_92 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_94 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_95 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_96 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_97 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_98 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_99 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_100 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_101 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_102 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_103 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_104 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_105 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_106 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_108 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_109 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_110 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_111 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_112 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_113 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_114 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_115 | 1.0 | 0.0 | 1.0 |
| GCHDDLEI_116 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_117 | 0.0 | 1.0 | 0.0 |
| GCHDDLEI_118 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)