Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| APGMCEBP_72 | 117689 | 118417 | cblA | CblA family class A beta-lactamase | PARTIALX | 99.18 | 82.09 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| APGMCEBP_1 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_3 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_4 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_5 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_6 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_7 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_8 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_9 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_12 | 1.0 | 0.0 | 1.0 |
| APGMCEBP_13 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_14 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_15 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_16 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_18 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_19 | 1.0 | 0.0 | 1.0 |
| APGMCEBP_21 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_22 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_23 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_24 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_25 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_28 | 1.0 | 0.0 | 1.0 |
| APGMCEBP_29 | 1.0 | 0.0 | 1.0 |
| APGMCEBP_31 | 1.0 | 0.0 | 1.0 |
| APGMCEBP_32 | 1.0 | 0.0 | 1.0 |
| APGMCEBP_33 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_34 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_35 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_36 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_37 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_38 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_39 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_40 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_41 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_42 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_43 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_46 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_47 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_48 | 1.0 | 0.0 | 1.0 |
| APGMCEBP_49 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_50 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_53 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_56 | 1.0 | 0.0 | 1.0 |
| APGMCEBP_57 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_59 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_60 | 1.0 | 0.0 | 1.0 |
| APGMCEBP_61 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_62 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_63 | 1.0 | 0.0 | 1.0 |
| APGMCEBP_65 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_66 | 1.0 | 0.0 | 1.0 |
| APGMCEBP_67 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_68 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_69 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_70 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_71 | 0.0 | 1.0 | 0.0 |
| APGMCEBP_72 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| APGMCEBP_14 | 10026 | 16247 | False | Myoviridae | VOG0982, |
Phigaro v2.4.0 (Database: Jan. 2024 release)