Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CEKOFEHF_1 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_2 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_3 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_4 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_5 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_6 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_7 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_8 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_9 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_10 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_11 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_12 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_13 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_14 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_15 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_16 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_17 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_18 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_19 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_20 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_21 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_22 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_23 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_24 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_25 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_26 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_27 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_28 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_29 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_30 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_31 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_32 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_33 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_34 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_35 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_36 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_37 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_38 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_39 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_40 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_41 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_42 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_43 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_44 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_45 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_46 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_47 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_48 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_49 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_50 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_51 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_52 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_53 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_54 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_55 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_56 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_57 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_58 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_59 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_60 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_61 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_62 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_63 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_64 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_66 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_67 | 0.0 | 1.0 | 0.0 |
| CEKOFEHF_68 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_70 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_71 | 1.0 | 0.0 | 1.0 |
| CEKOFEHF_72 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CEKOFEHF_11 | 150079 | 171722 | False | Siphoviridae | VOG9418, |
| CEKOFEHF_18 | 16001 | 35611 | False | Siphoviridae | VOG0198, |
| CEKOFEHF_20 | 42132 | 60802 | False | Siphoviridae | VOG4694, |
| CEKOFEHF_22 | 86242 | 95912 | True | Myoviridae | / |
| CEKOFEHF_24 | 20323 | 24059 | False | Siphoviridae | VOG1309, |
| CEKOFEHF_24 | 35844 | 52933 | False | Myoviridae | VOG4564, |
| CEKOFEHF_25 | 38792 | 63322 | False | Siphoviridae | VOG7438, |
| CEKOFEHF_32 | 26750 | 34932 | False | Siphoviridae | VOG0720, |
Phigaro v2.4.0 (Database: Jan. 2024 release)