Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NOHNPPOK_33 | 9515 | 10219 | WalR | 2.10e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| NOHNPPOK_64 | 6895 | 7089 | CspR | 3.83e-31 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| NOHNPPOK_64 | 6895 | 7092 | CspA | 5.87e-31 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NOHNPPOK_23 | 30533 | 31630 | repUS73 | 1101 / 1101 | 93.91 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NOHNPPOK_1 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_2 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_3 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_4 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_5 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_6 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_7 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_8 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_9 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_10 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_11 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_12 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_13 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_14 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_15 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_16 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_17 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_18 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_19 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_20 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_21 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_22 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_23 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_24 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_25 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_26 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_27 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_28 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_29 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_30 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_31 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_32 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_33 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_34 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_35 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_36 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_37 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_38 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_39 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_40 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_41 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_42 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_43 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_44 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_45 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_46 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_47 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_48 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_49 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_50 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_51 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_52 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_53 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_54 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_55 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_56 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_57 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_58 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_59 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_60 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_61 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_62 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_63 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_64 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_65 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_66 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_67 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_68 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_69 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_70 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_72 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_73 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_74 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_75 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_76 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_77 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_78 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_79 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_81 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_82 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_83 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_84 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_87 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_89 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_91 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_92 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_93 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_94 | 1.0 | 0.0 | 1.0 |
| NOHNPPOK_95 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_96 | 0.0 | 1.0 | 0.0 |
| NOHNPPOK_97 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NOHNPPOK_8 | 3021 | 36844 | False | Siphoviridae | VOG8294, VOG3498, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564, VOG7038, VOG0720, VOG4544, VOG0796, VOG0198, VOG4693, VOG4566, VOG0186, VOG1309, VOG7298, VOG0181, VOG6495 |
| NOHNPPOK_17 | 37352 | 57667 | False | Siphoviridae | VOG4705, VOG4334, VOG4626, VOG3462, VOG0801, VOG6163, VOG0725, VOG0799, VOG0724, VOG9583, VOG4713, VOG1329, VOG10914, VOG4564, VOG0720, VOG10227, VOG0796, VOG0638, VOG1183 |
| NOHNPPOK_19 | 30168 | 54229 | False | Siphoviridae | VOG6422, VOG0054, VOG1637, VOG8294, VOG0602, VOG1637, VOG7896, VOG4334, VOG4626, VOG1637, VOG3463, VOG4619, VOG0801, VOG4910, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4572, VOG4555, VOG0692, VOG0691, VOG4544, VOG3699 |
| NOHNPPOK_21 | 31018 | 49674 | False | Siphoviridae | VOG4599, VOG4605, VOG0660, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)