Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PGEOLPNO_61 | 75337 | 75140 | CspA | 2.41e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| PGEOLPNO_61 | 75337 | 75143 | CspR | 1.05e-27 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PGEOLPNO_1 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_2 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_3 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_4 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_5 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_6 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_8 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_9 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_10 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_12 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_13 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_14 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_15 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_16 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_17 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_18 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_19 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_20 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_24 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_35 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_44 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_45 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_46 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_47 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_48 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_49 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_50 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_51 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_52 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_53 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_54 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_55 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_56 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_57 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_58 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_59 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_60 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_61 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_62 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_63 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_64 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_65 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_66 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_67 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_68 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_69 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_70 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_71 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_72 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_73 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_74 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_75 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_76 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_77 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_78 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_79 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_80 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_81 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_82 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_83 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_84 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_85 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_86 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_87 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_88 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_89 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_90 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_91 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_92 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_93 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_94 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_95 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_96 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_97 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_98 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_99 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_100 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_101 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_102 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_103 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_104 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_105 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_106 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_107 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_108 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_109 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_110 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_111 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_112 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_113 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_114 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_115 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_116 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_117 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_118 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_119 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_120 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_121 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_122 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_123 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_124 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_125 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_126 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_127 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_128 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_129 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_130 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_131 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_132 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_134 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_135 | 0.0 | 1.0 | 0.0 |
| PGEOLPNO_136 | 1.0 | 0.0 | 1.0 |
| PGEOLPNO_137 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PGEOLPNO_45 | 11811 | 36197 | False | Siphoviridae | VOG8239, VOG6422, VOG8294, VOG0641, VOG0648, VOG4599, VOG0727, VOG4545, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG10914, VOG8945, VOG4564, VOG0720, VOG10227 |
Phigaro v2.4.0 (Database: Jan. 2024 release)