Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EEIIEKBK_8 | 52125 | 52829 | WalR | 5.27e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| EEIIEKBK_48 | 86382 | 86188 | CspR | 4.12e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| EEIIEKBK_48 | 86382 | 86185 | CspA | 6.32e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EEIIEKBK_1 | 354 | 1307 | repUS64 | 954 / 954 | 99.48 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EEIIEKBK_1 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_2 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_3 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_4 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_5 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_6 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_7 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_8 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_9 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_10 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_11 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_12 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_13 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_14 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_15 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_17 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_18 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_19 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_20 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_21 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_22 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_23 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_24 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_26 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_27 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_28 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_29 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_31 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_32 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_33 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_34 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_35 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_36 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_37 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_38 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_39 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_40 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_41 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_42 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_43 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_44 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_45 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_46 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_47 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_48 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_49 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_50 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_51 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_53 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_54 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_55 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_56 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_57 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_58 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_59 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_60 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_61 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_62 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_63 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_64 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_65 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_66 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_67 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_69 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_70 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_71 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_72 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_73 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_74 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_75 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_77 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_78 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_79 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_81 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_82 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_83 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_85 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_86 | 1.0 | 0.0 | 1.0 |
| EEIIEKBK_87 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_88 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_89 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_90 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_91 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_93 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_96 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_98 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_99 | 0.0 | 1.0 | 0.0 |
| EEIIEKBK_100 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EEIIEKBK_14 | 11860 | 39480 | False | Siphoviridae | VOG4632, VOG4609, VOG0327, VOG0044, VOG3580, VOG0052, VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG9997, VOG8917, VOG1637 |
| EEIIEKBK_42 | 22585 | 49521 | False | Siphoviridae | VOG0054, VOG1637, VOG8294, VOG3498, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564, VOG7038, VOG0720, VOG4544, VOG0796, VOG0045 |
Phigaro v2.4.0 (Database: Jan. 2024 release)