Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CEKKKIHM_203 | 117837 | 119042 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| CEKKKIHM_135 | 49947 | 50681 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| CEKKKIHM_203 | 22212 | 23114 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
| CEKKKIHM_46 | 622 | 1587 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CEKKKIHM_203 | 22212 | 23114 | cepA | Unknown Beta-lactam | 100.00 | 100.00 | L13472 |
| CEKKKIHM_46 | 622 | 1587 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| CEKKKIHM_135 | 49947 | 50681 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| CEKKKIHM_135 | 51453 | 52350 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.22 | 61.34 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CEKKKIHM_203 | 22215 | 23114 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| CEKKKIHM_46 | 622 | 1584 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| CEKKKIHM_203 | 119067 | 119576 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| CEKKKIHM_135 | 49950 | 50681 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| CEKKKIHM_203 | 117837 | 119039 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| CEKKKIHM_135 | 51456 | 52349 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | PARTIALX | 96.31 | 61.19 | WP_000420317.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CEKKKIHM_1 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_4 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_6 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_7 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_10 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_11 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_13 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_14 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_15 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_16 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_17 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_18 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_19 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_20 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_21 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_22 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_23 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_24 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_26 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_28 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_30 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_31 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_32 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_36 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_37 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_38 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_39 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_41 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_42 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_43 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_45 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_46 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_47 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_49 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_52 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_53 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_54 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_55 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_56 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_58 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_59 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_60 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_61 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_63 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_64 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_65 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_67 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_69 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_70 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_72 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_74 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_76 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_78 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_79 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_82 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_84 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_87 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_89 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_90 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_92 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_94 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_95 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_97 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_98 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_99 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_100 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_101 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_102 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_104 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_105 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_107 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_109 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_110 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_111 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_113 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_114 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_115 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_117 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_119 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_120 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_124 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_125 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_126 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_128 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_129 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_130 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_131 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_132 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_134 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_135 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_139 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_141 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_143 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_144 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_145 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_146 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_149 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_150 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_151 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_152 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_153 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_154 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_155 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_156 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_158 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_159 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_161 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_162 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_163 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_164 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_165 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_166 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_167 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_168 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_169 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_170 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_171 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_172 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_173 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_174 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_176 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_178 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_179 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_180 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_181 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_182 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_183 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_184 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_185 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_186 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_187 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_188 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_189 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_190 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_191 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_192 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_193 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_194 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_195 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_196 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_197 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_198 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_199 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_200 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_201 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_202 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_203 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_204 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_205 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_206 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_207 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_208 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_209 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_210 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_211 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_212 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_213 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_214 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_216 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_217 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_218 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_219 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_220 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_221 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_222 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_223 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_224 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_225 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_226 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_227 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_228 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_229 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_230 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_231 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_232 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_233 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_234 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_235 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_236 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_237 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_238 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_239 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_240 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_241 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_242 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_243 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_244 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_246 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_247 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_248 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_249 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_250 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_251 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_252 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_253 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_254 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_255 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_256 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_257 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_258 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_259 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_260 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_261 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_262 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_263 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_264 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_265 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_266 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_268 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_269 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_270 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_271 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_272 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_275 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_278 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_279 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_280 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_281 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_282 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_283 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_284 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_285 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_286 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_287 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_288 | 1.0 | 0.0 | 1.0 |
| CEKKKIHM_290 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_292 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_295 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_296 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_297 | 0.0 | 1.0 | 0.0 |
| CEKKKIHM_298 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CEKKKIHM_30 | 81781 | 92655 | False | Siphoviridae | VOG3992, |
| CEKKKIHM_262 | 107801 | 118675 | False | Siphoviridae | VOG3992, |
Phigaro v2.4.0 (Database: Jan. 2024 release)