Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 1 | 0 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DEDALPJK_73 | 185810 | 186712 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DEDALPJK_73 | 185810 | 186712 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DEDALPJK_73 | 185813 | 186712 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DEDALPJK_78 | 1202 | 2395 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| DEDALPJK_78 | 1202 | 2395 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| DEDALPJK_78 | 1202 | 2395 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DEDALPJK_1 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_2 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_4 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_9 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_10 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_11 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_12 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_13 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_15 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_16 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_18 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_19 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_21 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_22 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_23 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_24 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_25 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_29 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_30 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_31 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_33 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_36 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_37 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_39 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_40 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_42 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_43 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_44 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_46 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_47 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_48 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_51 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_53 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_54 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_55 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_56 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_57 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_58 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_59 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_60 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_61 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_62 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_63 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_64 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_65 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_66 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_67 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_68 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_69 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_70 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_71 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_72 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_73 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_74 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_75 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_76 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_77 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_78 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_79 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_80 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_81 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_82 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_83 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_84 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_85 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_86 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_87 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_88 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_89 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_90 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_91 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_92 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_93 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_94 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_95 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_96 | 1.0 | 0.0 | 1.0 |
| DEDALPJK_97 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_98 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_99 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_100 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_101 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_102 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_103 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_104 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_105 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_106 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_107 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_108 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_109 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_111 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_112 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_113 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_114 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_115 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_116 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_117 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_118 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_119 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_120 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_122 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_123 | 0.0 | 1.0 | 0.0 |
| DEDALPJK_124 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DEDALPJK_80 | 85924 | 93883 | False | Siphoviridae | VOG4556, |
| DEDALPJK_108 | 43229 | 52488 | False | Unknown | VOG4572, |
| DEDALPJK_115 | 12489 | 24938 | False | Siphoviridae | VOG11071, |
Phigaro v2.4.0 (Database: Jan. 2024 release)