Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CNDNEJJE_44 | 37943 | 38845 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
| CNDNEJJE_203 | 13948 | 15921 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CNDNEJJE_203 | 13996 | 15921 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
| CNDNEJJE_44 | 37943 | 38845 | cepA | Unknown Beta-lactam | 99.67 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CNDNEJJE_44 | 37946 | 38845 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| CNDNEJJE_203 | 13996 | 15918 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| CNDNEJJE_269 | 2025 | 2605 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CNDNEJJE_1 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_2 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_3 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_4 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_5 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_7 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_8 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_9 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_10 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_11 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_12 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_13 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_14 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_15 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_16 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_17 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_18 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_19 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_20 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_21 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_22 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_23 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_24 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_25 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_26 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_27 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_28 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_29 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_30 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_31 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_32 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_33 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_34 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_35 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_36 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_37 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_38 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_39 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_40 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_41 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_42 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_43 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_44 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_45 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_46 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_47 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_48 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_49 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_50 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_51 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_52 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_53 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_55 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_56 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_57 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_58 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_59 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_60 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_62 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_64 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_65 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_66 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_67 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_68 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_69 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_70 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_71 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_72 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_73 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_74 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_75 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_76 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_77 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_78 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_79 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_80 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_81 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_82 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_83 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_84 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_85 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_86 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_87 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_88 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_89 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_90 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_92 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_94 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_95 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_96 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_97 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_98 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_99 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_100 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_101 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_102 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_103 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_104 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_105 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_106 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_107 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_108 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_109 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_111 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_112 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_113 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_119 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_120 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_121 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_122 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_123 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_124 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_125 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_126 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_127 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_128 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_129 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_130 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_131 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_132 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_133 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_134 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_135 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_138 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_139 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_140 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_141 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_142 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_143 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_144 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_145 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_146 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_147 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_148 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_149 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_150 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_151 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_152 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_154 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_155 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_156 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_157 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_158 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_159 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_160 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_162 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_163 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_164 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_165 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_166 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_167 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_168 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_169 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_170 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_171 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_172 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_173 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_174 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_177 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_178 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_179 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_181 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_183 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_184 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_185 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_186 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_189 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_190 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_191 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_192 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_196 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_197 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_199 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_202 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_203 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_204 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_205 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_206 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_207 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_208 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_210 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_212 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_214 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_215 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_216 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_218 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_219 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_224 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_225 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_226 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_229 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_231 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_233 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_235 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_237 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_239 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_240 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_241 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_242 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_244 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_245 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_247 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_248 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_249 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_250 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_251 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_252 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_253 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_254 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_255 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_256 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_257 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_258 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_260 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_262 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_264 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_266 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_267 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_269 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_273 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_274 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_275 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_278 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_279 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_281 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_282 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_283 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_284 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_285 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_287 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_288 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_291 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_293 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_294 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_295 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_296 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_297 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_300 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_301 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_302 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_303 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_304 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_306 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_307 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_308 | 0.0 | 1.0 | 0.0 |
| CNDNEJJE_309 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_313 | 1.0 | 0.0 | 1.0 |
| CNDNEJJE_314 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CNDNEJJE_247 | 11777 | 15367 | False | Siphoviridae | VOG4556, |
| CNDNEJJE_258 | 8304 | 12985 | False | Myoviridae | VOG0189, |
Phigaro v2.4.0 (Database: Jan. 2024 release)