Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 1 | 0 | 5.10 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KLMDFDGA_33 | 82430 | 83635 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| KLMDFDGA_33 | 60480 | 61382 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
| KLMDFDGA_38 | 46408 | 47583 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.49 | 97.76 | AF251288.1 |
| KLMDFDGA_217 | 28665 | 30638 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
| KLMDFDGA_22 | 318 | 1523 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KLMDFDGA_33 | 60480 | 61382 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | L13472 |
| KLMDFDGA_217 | 28665 | 30590 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KLMDFDGA_33 | 60483 | 61382 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005795628.1 |
| KLMDFDGA_217 | 28668 | 30590 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| KLMDFDGA_22 | 321 | 1523 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| KLMDFDGA_33 | 82430 | 83632 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| KLMDFDGA_38 | 46408 | 47583 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.49 | 97.76 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KLMDFDGA_39 | 27217 | 28410 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| KLMDFDGA_39 | 27217 | 28410 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| KLMDFDGA_39 | 27217 | 28410 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KLMDFDGA_1 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_3 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_4 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_5 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_7 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_8 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_9 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_10 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_11 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_12 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_13 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_14 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_15 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_16 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_17 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_18 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_19 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_20 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_21 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_22 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_23 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_24 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_25 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_26 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_27 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_28 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_29 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_30 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_31 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_32 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_33 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_34 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_35 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_36 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_37 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_38 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_39 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_40 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_41 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_42 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_43 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_44 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_45 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_46 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_47 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_48 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_49 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_50 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_51 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_52 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_53 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_54 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_55 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_56 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_57 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_58 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_59 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_61 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_63 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_64 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_65 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_66 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_67 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_68 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_69 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_70 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_71 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_72 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_73 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_74 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_75 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_76 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_78 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_79 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_80 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_81 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_82 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_83 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_85 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_86 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_87 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_91 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_92 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_93 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_94 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_95 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_96 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_97 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_101 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_102 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_103 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_104 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_105 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_106 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_107 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_108 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_109 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_110 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_111 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_112 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_113 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_114 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_115 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_120 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_121 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_122 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_123 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_124 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_125 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_127 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_128 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_129 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_130 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_132 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_133 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_134 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_135 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_136 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_137 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_138 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_139 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_140 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_141 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_142 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_143 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_144 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_145 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_146 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_147 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_148 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_149 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_150 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_151 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_152 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_153 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_154 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_155 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_157 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_158 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_159 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_161 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_162 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_163 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_164 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_166 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_167 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_168 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_169 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_170 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_171 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_172 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_173 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_174 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_175 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_176 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_177 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_178 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_180 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_181 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_185 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_186 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_187 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_188 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_190 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_191 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_192 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_193 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_196 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_197 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_198 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_199 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_201 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_202 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_204 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_205 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_207 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_209 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_211 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_213 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_215 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_216 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_217 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_218 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_219 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_220 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_221 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_222 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_223 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_224 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_225 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_226 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_228 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_229 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_230 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_232 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_233 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_236 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_237 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_238 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_239 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_240 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_241 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_242 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_243 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_244 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_245 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_247 | 1.0 | 0.0 | 1.0 |
| KLMDFDGA_248 | 0.0 | 1.0 | 0.0 |
| KLMDFDGA_249 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)