Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 1 | 0 | 3.16 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KCLHAANG_224 | 37531 | 38433 | CepA-29 | ARO:3006224 | CepA-29 | 99.67 | 100.00 | NG_050385.1 |
| KCLHAANG_147 | 134 | 2080 | tet(Q) | ARO:3000191 | tet(Q) | 97.18 | 98.63 | Z21523.1 |
| KCLHAANG_87 | 134 | 2080 | tet(Q) | ARO:3000191 | tet(Q) | 98.90 | 98.63 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KCLHAANG_224 | 37531 | 38433 | cepA-29 | Unknown Beta-lactam | 99.78 | 100.00 | U05884 |
| KCLHAANG_87 | 134 | 2046 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.27 | 99.33 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KCLHAANG_224 | 37534 | 38433 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_063865204.1 |
| KCLHAANG_87 | 134 | 2047 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.90 | 99.53 | WP_002560998.1 |
| KCLHAANG_147 | 134 | 2047 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.96 | 99.53 | WP_004293868.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KCLHAANG_228 | 9251 | 10444 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| KCLHAANG_228 | 9251 | 10444 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| KCLHAANG_228 | 9251 | 10444 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KCLHAANG_1 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_2 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_3 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_5 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_6 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_11 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_12 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_14 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_16 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_17 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_18 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_20 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_21 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_22 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_24 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_26 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_27 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_29 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_30 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_31 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_32 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_33 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_34 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_35 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_36 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_37 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_39 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_40 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_41 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_44 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_45 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_46 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_47 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_49 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_50 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_52 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_53 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_54 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_55 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_56 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_57 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_58 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_59 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_60 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_61 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_62 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_64 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_65 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_66 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_68 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_69 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_70 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_71 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_72 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_73 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_75 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_76 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_77 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_78 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_80 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_83 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_84 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_87 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_90 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_92 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_94 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_95 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_96 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_98 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_99 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_100 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_101 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_102 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_103 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_106 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_108 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_109 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_111 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_112 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_113 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_114 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_116 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_118 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_120 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_121 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_122 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_123 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_125 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_126 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_127 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_128 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_129 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_133 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_134 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_135 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_136 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_137 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_138 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_139 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_140 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_141 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_142 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_143 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_144 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_145 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_147 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_149 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_150 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_152 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_155 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_157 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_158 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_159 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_160 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_161 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_163 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_164 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_165 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_166 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_167 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_168 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_169 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_170 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_171 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_174 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_175 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_176 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_178 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_179 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_180 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_181 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_182 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_183 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_184 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_185 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_186 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_187 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_188 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_189 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_190 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_192 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_193 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_194 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_195 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_196 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_197 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_198 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_199 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_200 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_201 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_202 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_203 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_204 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_205 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_206 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_207 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_208 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_209 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_210 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_211 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_212 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_213 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_214 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_215 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_216 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_217 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_218 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_219 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_220 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_221 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_222 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_223 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_224 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_225 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_226 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_227 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_228 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_229 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_230 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_231 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_232 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_233 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_234 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_235 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_236 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_237 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_238 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_239 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_240 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_241 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_242 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_243 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_244 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_245 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_246 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_247 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_248 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_249 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_256 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_257 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_258 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_259 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_260 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_261 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_262 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_265 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_266 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_267 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_268 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_269 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_270 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_271 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_272 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_273 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_275 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_281 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_282 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_283 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_284 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_289 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_294 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_295 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_296 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_297 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_298 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_299 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_300 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_301 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_302 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_303 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_304 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_305 | 1.0 | 0.0 | 1.0 |
| KCLHAANG_306 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_307 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_310 | 0.0 | 1.0 | 0.0 |
| KCLHAANG_311 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KCLHAANG_36 | 7524 | 14818 | False | Siphoviridae | VOG0704, |
| KCLHAANG_300 | 160072 | 165188 | False | Myoviridae | / |
Phigaro v2.4.0 (Database: Jan. 2024 release)