Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 1 | 0 | 4.12 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CIDEINEB_82 | 196821 | 198746 | tet(Q) | ARO:3000191 | tet(Q) | 96.26 | 97.56 | Z21523.1 |
| CIDEINEB_21 | 131807 | 133012 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| CIDEINEB_21 | 109857 | 110759 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CIDEINEB_21 | 109857 | 110759 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | L13472 |
| CIDEINEB_82 | 196821 | 198746 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CIDEINEB_21 | 133037 | 133546 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| CIDEINEB_21 | 109860 | 110759 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005795628.1 |
| CIDEINEB_21 | 131807 | 133009 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| CIDEINEB_82 | 196821 | 198743 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.38 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CIDEINEB_91 | 1258 | 2451 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| CIDEINEB_91 | 1258 | 2451 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| CIDEINEB_91 | 1258 | 2451 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CIDEINEB_1 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_2 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_3 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_4 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_6 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_7 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_8 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_9 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_10 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_11 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_12 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_13 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_14 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_15 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_16 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_17 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_18 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_19 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_20 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_21 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_22 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_23 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_24 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_25 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_26 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_27 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_28 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_29 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_31 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_33 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_34 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_35 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_36 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_37 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_38 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_39 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_40 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_41 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_42 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_43 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_44 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_45 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_46 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_47 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_48 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_49 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_50 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_51 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_52 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_53 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_56 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_57 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_58 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_60 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_61 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_62 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_63 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_64 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_65 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_66 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_67 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_68 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_70 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_71 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_72 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_73 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_74 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_75 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_77 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_78 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_79 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_80 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_81 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_82 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_83 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_84 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_87 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_88 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_89 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_90 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_91 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_92 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_94 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_95 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_96 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_98 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_99 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_100 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_101 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_102 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_103 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_104 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_105 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_107 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_108 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_112 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_113 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_114 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_116 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_117 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_118 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_119 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_122 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_123 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_124 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_125 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_127 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_128 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_129 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_131 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_132 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_133 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_134 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_135 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_137 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_139 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_140 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_141 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_142 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_143 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_144 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_145 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_146 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_147 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_148 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_149 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_150 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_151 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_152 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_153 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_154 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_155 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_157 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_158 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_159 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_160 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_161 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_162 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_164 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_165 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_166 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_167 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_169 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_170 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_171 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_172 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_173 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_174 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_176 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_178 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_179 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_181 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_182 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_183 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_184 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_185 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_187 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_189 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_190 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_191 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_193 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_195 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_196 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_197 | 0.0 | 1.0 | 0.0 |
| CIDEINEB_198 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_200 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_201 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_202 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_203 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_204 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_207 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_208 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_211 | 1.0 | 0.0 | 1.0 |
| CIDEINEB_212 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)