Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 1 | 0 | 4.12 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OIOIHCIG_74 | 86509 | 88434 | tet(Q) | ARO:3000191 | tet(Q) | 97.19 | 97.56 | Z21523.1 |
| OIOIHCIG_62 | 83793 | 84998 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| OIOIHCIG_62 | 61842 | 62744 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OIOIHCIG_62 | 61842 | 62744 | cepA | Unknown Beta-lactam | 99.78 | 100.00 | FR688022 |
| OIOIHCIG_74 | 86509 | 88434 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 96.73 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OIOIHCIG_62 | 61845 | 62744 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005816369.1 |
| OIOIHCIG_62 | 85023 | 85532 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| OIOIHCIG_62 | 83793 | 84995 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| OIOIHCIG_74 | 86509 | 88431 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.50 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| OIOIHCIG_71 | 8649 | 9842 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| OIOIHCIG_71 | 8649 | 9842 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| OIOIHCIG_71 | 8649 | 9842 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OIOIHCIG_1 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_2 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_3 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_4 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_5 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_6 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_7 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_9 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_12 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_13 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_14 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_15 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_16 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_18 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_19 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_20 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_21 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_22 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_23 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_24 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_25 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_26 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_27 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_29 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_30 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_31 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_33 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_34 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_35 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_37 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_39 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_41 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_42 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_43 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_44 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_45 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_46 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_47 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_48 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_49 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_50 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_51 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_52 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_53 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_54 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_55 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_56 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_57 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_58 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_59 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_60 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_61 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_62 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_63 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_64 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_65 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_66 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_67 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_68 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_69 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_70 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_71 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_72 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_73 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_74 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_75 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_76 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_77 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_78 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_79 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_80 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_81 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_82 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_83 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_84 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_85 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_86 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_87 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_88 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_89 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_90 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_91 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_92 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_93 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_94 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_95 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_96 | 1.0 | 0.0 | 1.0 |
| OIOIHCIG_97 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_98 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_99 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_100 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_101 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_102 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_103 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_104 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_106 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_107 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_110 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_112 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_113 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_114 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_115 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_116 | 0.0 | 1.0 | 0.0 |
| OIOIHCIG_117 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)