Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 1 | 0 | 4.12 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BHBJGAIK_19 | 45786 | 46991 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
| BHBJGAIK_11 | 37199 | 39173 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
| BHBJGAIK_19 | 23832 | 24734 | CepA-44 | ARO:3006225 | CepA-44 | 100.00 | 100.00 | NG_050386.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BHBJGAIK_19 | 23832 | 24734 | cepA-44 | Unknown Beta-lactam | 100.00 | 100.00 | U05885 |
| BHBJGAIK_11 | 37247 | 39172 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BHBJGAIK_19 | 23835 | 24734 | cepA-44 | extended-spectrum class A beta-lactamase CepA-44 | ALLELEX | 100.00 | 100.00 | WP_032579291.1 |
| BHBJGAIK_19 | 47016 | 47525 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| BHBJGAIK_11 | 37247 | 39169 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
| BHBJGAIK_19 | 45786 | 46988 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BHBJGAIK_23 | 64376 | 65569 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 100.00 | 100.00 | BAA77277 |
| BHBJGAIK_23 | 64376 | 65569 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 96.90 | 100.00 | BAA77275 |
| BHBJGAIK_23 | 64376 | 65569 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 94.89 | 100.00 | BAA77276 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BHBJGAIK_1 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_3 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_4 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_5 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_6 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_7 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_9 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_10 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_11 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_12 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_13 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_14 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_15 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_16 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_17 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_18 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_19 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_20 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_21 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_22 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_23 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_24 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_25 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_26 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_27 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_28 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_30 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_31 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_32 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_33 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_34 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_35 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_36 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_37 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_38 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_39 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_40 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_41 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_42 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_43 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_45 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_46 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_47 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_48 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_49 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_50 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_51 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_54 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_55 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_58 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_59 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_60 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_61 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_63 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_64 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_65 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_66 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_67 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_68 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_69 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_71 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_72 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_73 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_76 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_77 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_78 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_81 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_82 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_83 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_84 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_85 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_87 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_88 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_90 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_91 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_93 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_94 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_95 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_96 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_97 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_98 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_100 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_101 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_102 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_103 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_104 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_107 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_108 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_109 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_110 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_111 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_115 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_118 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_119 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_121 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_123 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_124 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_125 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_126 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_127 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_128 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_129 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_130 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_131 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_132 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_133 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_134 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_138 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_139 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_140 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_141 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_143 | 0.0 | 1.0 | 0.0 |
| BHBJGAIK_144 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_145 | 1.0 | 0.0 | 1.0 |
| BHBJGAIK_148 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BHBJGAIK_31 | 120118 | 128375 | False | Siphoviridae | VOG7238, |
| BHBJGAIK_37 | 147356 | 157103 | False | Unknown | VOG4572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)