Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 1 | 0 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HHOEBFPG_72 | 383280 | 385226 | tet(Q) | ARO:3000191 | tet(Q) | 97.02 | 98.63 | Z21523.1 |
| HHOEBFPG_62 | 22810 | 23712 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HHOEBFPG_62 | 22810 | 23712 | cepA | Unknown Beta-lactam | 99.78 | 100.00 | L13472 |
| HHOEBFPG_72 | 383314 | 385226 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.17 | 99.33 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HHOEBFPG_62 | 22813 | 23712 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005795628.1 |
| HHOEBFPG_72 | 383313 | 385226 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.81 | 99.53 | WP_004293868.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| HHOEBFPG_73 | 259229 | 260422 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| HHOEBFPG_73 | 259229 | 260422 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| HHOEBFPG_73 | 259229 | 260422 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HHOEBFPG_1 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_3 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_7 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_9 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_10 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_11 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_12 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_15 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_16 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_19 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_21 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_26 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_27 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_28 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_29 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_30 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_31 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_35 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_37 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_38 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_40 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_41 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_42 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_43 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_44 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_45 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_46 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_47 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_48 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_49 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_50 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_51 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_52 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_53 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_54 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_55 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_56 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_57 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_58 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_59 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_60 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_61 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_62 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_63 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_64 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_65 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_66 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_67 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_68 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_69 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_70 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_71 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_72 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_73 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_74 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_75 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_76 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_77 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_78 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_79 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_80 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_81 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_82 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_83 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_84 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_85 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_86 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_87 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_88 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_89 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_90 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_91 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_92 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_93 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_94 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_95 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_96 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_97 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_98 | 1.0 | 0.0 | 1.0 |
| HHOEBFPG_99 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_100 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_101 | 0.0 | 1.0 | 0.0 |
| HHOEBFPG_102 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)