Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 1 | 0 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CNNODJGE_53 | 14652 | 16577 | tet(Q) | ARO:3000191 | tet(Q) | 97.35 | 97.56 | Z21523.1 |
| CNNODJGE_42 | 13421 | 14323 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CNNODJGE_42 | 13421 | 14323 | cepA | Unknown Beta-lactam | 99.67 | 100.00 | L13472 |
| CNNODJGE_53 | 14652 | 16577 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.09 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CNNODJGE_42 | 13424 | 14323 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| CNNODJGE_53 | 14655 | 16577 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.35 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CNNODJGE_52 | 535 | 1728 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 99.92 | 100.00 | BAA77277 |
| CNNODJGE_52 | 535 | 1728 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 96.98 | 100.00 | BAA77275 |
| CNNODJGE_52 | 535 | 1728 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 94.97 | 100.00 | BAA77276 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CNNODJGE_1 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_2 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_3 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_4 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_6 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_7 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_10 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_11 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_12 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_14 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_19 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_20 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_21 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_22 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_23 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_24 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_25 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_26 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_27 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_28 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_29 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_30 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_31 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_32 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_33 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_34 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_35 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_36 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_37 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_38 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_39 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_40 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_41 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_42 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_43 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_44 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_46 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_47 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_48 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_49 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_50 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_51 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_52 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_53 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_54 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_55 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_56 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_57 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_58 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_59 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_60 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_61 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_62 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_63 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_64 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_65 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_66 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_67 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_68 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_69 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_70 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_71 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_72 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_73 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_74 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_75 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_76 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_77 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_78 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_79 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_80 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_81 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_82 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_83 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_84 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_85 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_86 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_87 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_89 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_90 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_91 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_92 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_93 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_94 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_95 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_98 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_99 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_100 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_102 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_103 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_104 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_105 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_106 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_107 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_108 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_110 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_111 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_112 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_113 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_114 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_115 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_119 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_120 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_121 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_122 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_123 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_124 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_125 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_126 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_127 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_128 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_129 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_130 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_132 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_133 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_134 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_135 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_138 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_139 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_141 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_142 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_143 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_144 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_145 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_148 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_149 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_150 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_151 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_152 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_153 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_154 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_155 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_156 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_157 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_160 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_162 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_163 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_167 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_169 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_171 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_174 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_175 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_178 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_180 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_181 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_184 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_188 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_191 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_196 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_197 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_199 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_201 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_202 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_203 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_205 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_208 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_210 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_214 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_215 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_219 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_221 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_224 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_225 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_226 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_227 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_229 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_231 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_232 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_235 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_237 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_239 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_249 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_251 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_252 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_253 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_256 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_261 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_266 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_267 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_270 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_272 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_273 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_274 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_275 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_276 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_278 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_279 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_286 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_290 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_291 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_295 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_296 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_298 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_299 | 0.0 | 1.0 | 0.0 |
| CNNODJGE_300 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_301 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_303 | 1.0 | 0.0 | 1.0 |
| CNNODJGE_304 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)