Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DAKACKIE_40 | 196148 | 198073 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| DAKACKIE_19 | 126378 | 127280 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DAKACKIE_19 | 126378 | 127280 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | L13472 |
| DAKACKIE_40 | 196148 | 198073 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DAKACKIE_19 | 126378 | 127277 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| DAKACKIE_40 | 196151 | 198073 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DAKACKIE_1 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_2 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_3 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_4 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_6 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_7 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_9 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_10 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_11 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_12 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_13 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_14 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_15 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_16 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_17 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_18 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_19 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_20 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_21 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_22 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_23 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_24 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_25 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_26 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_27 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_28 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_30 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_31 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_32 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_33 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_34 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_35 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_36 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_37 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_38 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_39 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_40 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_41 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_42 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_43 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_44 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_45 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_46 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_47 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_48 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_49 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_51 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_52 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_53 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_54 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_55 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_56 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_57 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_58 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_60 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_62 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_63 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_64 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_65 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_66 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_67 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_69 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_70 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_71 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_74 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_75 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_77 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_78 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_83 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_84 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_85 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_86 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_87 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_88 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_89 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_95 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_96 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_97 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_98 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_99 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_102 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_103 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_104 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_106 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_107 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_111 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_112 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_113 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_115 | 0.0 | 1.0 | 0.0 |
| DAKACKIE_116 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_117 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_118 | 1.0 | 0.0 | 1.0 |
| DAKACKIE_119 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DAKACKIE_19 | 168970 | 178486 | False | Siphoviridae | VOG7238, |
| DAKACKIE_21 | 300219 | 308178 | False | Siphoviridae | VOG4556, |
Phigaro v2.4.0 (Database: Jan. 2024 release)