Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBMDLEND_88 | 161047 | 163021 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
| IBMDLEND_66 | 40698 | 41600 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IBMDLEND_88 | 161047 | 162972 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
| IBMDLEND_66 | 40698 | 41600 | cepA | Unknown Beta-lactam | 99.67 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBMDLEND_66 | 40701 | 41600 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| IBMDLEND_88 | 161050 | 162972 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IBMDLEND_2 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_3 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_4 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_5 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_6 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_7 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_8 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_9 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_11 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_13 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_14 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_15 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_16 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_17 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_19 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_20 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_21 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_22 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_23 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_24 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_26 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_27 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_28 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_29 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_30 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_31 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_32 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_33 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_34 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_35 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_36 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_37 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_38 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_39 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_40 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_43 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_44 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_45 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_47 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_48 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_49 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_51 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_52 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_53 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_54 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_55 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_56 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_57 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_58 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_59 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_60 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_61 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_62 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_63 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_64 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_65 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_66 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_67 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_68 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_69 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_70 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_71 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_72 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_73 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_74 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_75 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_76 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_77 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_80 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_81 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_82 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_83 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_84 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_85 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_86 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_88 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_89 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_90 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_92 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_93 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_94 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_95 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_96 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_97 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_98 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_99 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_100 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_101 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_103 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_104 | 1.0 | 0.0 | 1.0 |
| IBMDLEND_105 | 0.0 | 1.0 | 0.0 |
| IBMDLEND_106 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IBMDLEND_3 | 14999 | 21416 | False | Siphoviridae | VOG4556, |
| IBMDLEND_65 | 161579 | 167538 | False | Myoviridae | VOG0982, |
Phigaro v2.4.0 (Database: Jan. 2024 release)