Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MGIMPJEJ_18 | 180570 | 181472 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
| MGIMPJEJ_20 | 40994 | 42199 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
| MGIMPJEJ_114 | 29600 | 31573 | tet(Q) | ARO:3000191 | tet(Q) | 97.11 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MGIMPJEJ_114 | 29600 | 31525 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X58717 |
| MGIMPJEJ_18 | 180570 | 181472 | cepA-49 | Unknown Beta-lactam | 99.78 | 100.00 | U05886 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MGIMPJEJ_20 | 42224 | 42733 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| MGIMPJEJ_114 | 29603 | 31525 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
| MGIMPJEJ_77 | 1 | 696 | aadS | aminoglycoside 6-adenylyltransferase AadS | PARTIAL_CONTIG_ENDX | 100.00 | 80.84 | WP_003013318.1 |
| MGIMPJEJ_18 | 180573 | 181472 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005795628.1 |
| MGIMPJEJ_20 | 40994 | 42196 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MGIMPJEJ_1 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_2 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_3 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_4 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_5 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_6 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_7 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_8 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_9 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_10 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_11 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_12 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_13 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_14 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_15 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_16 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_17 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_18 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_19 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_20 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_21 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_22 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_23 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_24 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_25 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_26 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_27 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_28 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_29 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_30 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_31 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_32 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_33 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_34 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_35 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_36 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_37 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_38 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_39 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_40 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_41 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_42 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_43 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_44 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_45 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_46 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_47 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_48 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_49 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_50 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_51 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_52 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_53 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_54 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_55 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_56 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_57 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_58 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_59 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_60 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_61 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_62 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_63 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_64 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_65 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_66 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_67 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_68 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_70 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_73 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_74 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_75 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_77 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_80 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_81 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_83 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_86 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_88 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_89 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_92 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_93 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_95 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_96 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_97 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_98 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_99 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_100 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_101 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_102 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_103 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_104 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_105 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_106 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_108 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_109 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_111 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_112 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_113 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_114 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_115 | 1.0 | 0.0 | 1.0 |
| MGIMPJEJ_116 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_117 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_118 | 0.0 | 1.0 | 0.0 |
| MGIMPJEJ_121 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MGIMPJEJ_31 | 12575 | 20986 | False | Siphoviridae | VOG4841, |
| MGIMPJEJ_61 | 25012 | 31974 | False | Unknown | VOG1047, |
Phigaro v2.4.0 (Database: Jan. 2024 release)