Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OIIOHAEH_28 | 271508 | 273433 | tet(Q) | ARO:3000191 | tet(Q) | 97.97 | 97.56 | Z21523.1 |
| OIIOHAEH_13 | 150749 | 151651 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OIIOHAEH_13 | 150749 | 151651 | cepA-49 | Unknown Beta-lactam | 99.89 | 100.00 | U05886 |
| OIIOHAEH_28 | 271508 | 273433 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.77 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OIIOHAEH_13 | 150752 | 151651 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005795628.1 |
| OIIOHAEH_28 | 271508 | 273430 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.97 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OIIOHAEH_1 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_2 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_3 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_4 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_5 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_6 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_7 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_8 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_9 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_10 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_11 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_12 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_13 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_14 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_15 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_16 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_17 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_18 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_19 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_20 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_21 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_22 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_23 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_24 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_25 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_26 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_27 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_28 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_29 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_30 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_31 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_32 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_33 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_34 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_36 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_37 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_39 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_40 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_41 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_42 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_43 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_45 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_46 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_48 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_49 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_51 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_52 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_53 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_55 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_59 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_60 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_62 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_63 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_65 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_66 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_69 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_70 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_71 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_72 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_73 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_74 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_75 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_76 | 0.0 | 1.0 | 0.0 |
| OIIOHAEH_77 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_78 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_80 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_81 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_82 | 1.0 | 0.0 | 1.0 |
| OIIOHAEH_83 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)