Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DHBAMGME_18 | 27568 | 28470 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DHBAMGME_18 | 27568 | 28470 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DHBAMGME_18 | 27571 | 28470 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DHBAMGME_1 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_2 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_3 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_5 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_6 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_7 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_8 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_9 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_10 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_11 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_12 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_13 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_14 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_15 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_16 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_17 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_18 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_19 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_20 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_21 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_22 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_23 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_24 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_25 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_26 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_27 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_28 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_29 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_30 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_31 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_32 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_33 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_34 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_35 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_36 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_37 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_38 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_39 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_40 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_41 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_42 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_43 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_44 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_45 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_46 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_47 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_48 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_49 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_50 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_51 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_52 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_53 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_54 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_55 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_56 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_57 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_58 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_59 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_64 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_65 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_67 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_68 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_69 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_70 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_71 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_75 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_76 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_77 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_78 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_79 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_80 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_81 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_82 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_83 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_85 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_86 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_88 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_89 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_90 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_91 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_92 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_93 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_94 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_95 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_96 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_97 | 1.0 | 0.0 | 1.0 |
| DHBAMGME_98 | 0.0 | 1.0 | 0.0 |
| DHBAMGME_99 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DHBAMGME_23 | 36765 | 44724 | False | Siphoviridae | VOG4556, |
| DHBAMGME_46 | 14688 | 27298 | False | Siphoviridae | VOG11071, |
Phigaro v2.4.0 (Database: Jan. 2024 release)