Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GPBAHGLE_82 | 27710 | 28612 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GPBAHGLE_82 | 27710 | 28612 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GPBAHGLE_82 | 27713 | 28612 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GPBAHGLE_1 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_3 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_5 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_6 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_8 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_11 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_14 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_17 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_18 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_21 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_22 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_23 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_24 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_26 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_28 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_29 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_32 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_34 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_35 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_36 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_38 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_39 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_41 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_43 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_44 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_49 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_52 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_55 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_56 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_58 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_59 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_62 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_63 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_64 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_65 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_66 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_67 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_68 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_69 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_70 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_71 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_72 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_73 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_74 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_75 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_76 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_77 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_78 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_79 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_80 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_81 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_82 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_83 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_84 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_85 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_86 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_87 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_88 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_89 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_90 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_91 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_92 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_93 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_94 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_95 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_96 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_97 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_98 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_99 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_100 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_101 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_102 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_103 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_104 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_106 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_107 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_108 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_109 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_110 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_112 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_113 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_114 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_115 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_116 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_117 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_118 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_119 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_120 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_121 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_123 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_124 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_125 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_126 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_127 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_128 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_129 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_130 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_131 | 1.0 | 0.0 | 1.0 |
| GPBAHGLE_132 | 0.0 | 1.0 | 0.0 |
| GPBAHGLE_133 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GPBAHGLE_87 | 86033 | 93992 | False | Siphoviridae | VOG4556, |
| GPBAHGLE_117 | 14281 | 23797 | False | Siphoviridae | VOG7238, |
Phigaro v2.4.0 (Database: Jan. 2024 release)