Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AKAODFGF_57 | 205716 | 206618 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
| AKAODFGF_72 | 161056 | 163030 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AKAODFGF_72 | 161056 | 162981 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
| AKAODFGF_57 | 205716 | 206618 | cepA | Unknown Beta-lactam | 99.67 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AKAODFGF_57 | 205719 | 206618 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| AKAODFGF_72 | 161059 | 162981 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AKAODFGF_1 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_2 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_3 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_4 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_5 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_6 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_7 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_8 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_10 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_11 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_13 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_14 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_15 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_16 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_17 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_19 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_21 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_22 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_23 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_25 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_26 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_27 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_28 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_29 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_30 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_31 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_32 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_33 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_34 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_35 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_36 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_37 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_39 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_40 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_41 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_42 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_43 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_44 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_45 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_46 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_47 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_48 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_49 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_50 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_51 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_52 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_53 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_54 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_55 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_56 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_57 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_58 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_59 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_60 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_61 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_62 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_63 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_64 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_65 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_66 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_67 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_68 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_69 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_70 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_72 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_73 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_74 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_75 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_77 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_78 | 1.0 | 0.0 | 1.0 |
| AKAODFGF_79 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_80 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_81 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_82 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_83 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_84 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_85 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_86 | 0.0 | 1.0 | 0.0 |
| AKAODFGF_87 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AKAODFGF_41 | 15901 | 22318 | False | Siphoviridae | VOG4556, |
| AKAODFGF_57 | 65093 | 71052 | False | Myoviridae | VOG0982, |
Phigaro v2.4.0 (Database: Jan. 2024 release)