Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OLGAJFCA_16 | 49313 | 48609 | WalR | 8.26e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| OLGAJFCA_15 | 12871 | 13068 | CspR | 3.52e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OLGAJFCA_1 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_2 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_3 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_4 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_5 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_6 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_7 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_8 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_9 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_10 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_11 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_12 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_13 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_14 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_15 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_16 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_17 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_18 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_19 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_20 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_21 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_22 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_23 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_24 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_25 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_26 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_27 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_28 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_29 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_30 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_31 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_32 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_33 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_34 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_35 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_36 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_37 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_38 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_39 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_40 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_41 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_42 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_43 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_44 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_45 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_46 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_47 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_48 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_49 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_50 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_51 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_52 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_53 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_54 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_55 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_56 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_57 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_58 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_59 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_60 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_62 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_63 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_64 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_65 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_66 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_67 | 0.0 | 1.0 | 0.0 |
| OLGAJFCA_69 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_70 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_71 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_72 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_73 | 1.0 | 0.0 | 1.0 |
| OLGAJFCA_74 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OLGAJFCA_15 | 35059 | 66588 | False | Siphoviridae | VOG7236, VOG8241, VOG1309, VOG0186, VOG4566, VOG0226, VOG11003, VOG9860, VOG0536, VOG0195, VOG0152, VOG6131, VOG3643, VOG0044, VOG6815, VOG0198, VOG4570, VOG4549, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG4705, VOG7888 |
Phigaro v2.4.0 (Database: Jan. 2024 release)