Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MDIIDMHH_3 | 17974 | 18678 | WalR | 1.72e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MDIIDMHH_4 | 102255 | 102058 | CspR | 6.02e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MDIIDMHH_39 | 17954 | 18988 | rep38 | 1046 / 1104 | 82.70 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MDIIDMHH_1 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_2 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_3 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_4 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_5 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_6 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_7 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_8 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_9 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_10 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_11 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_12 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_13 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_14 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_15 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_16 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_17 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_18 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_19 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_20 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_21 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_22 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_23 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_24 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_25 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_26 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_27 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_28 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_29 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_30 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_31 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_32 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_33 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_34 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_35 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_36 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_37 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_38 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_39 | 1.0 | 0.0 | 1.0 |
| MDIIDMHH_40 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_41 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_42 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_43 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_44 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_45 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_46 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_47 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_48 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_49 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_50 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_51 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_52 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_53 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_54 | 1.0 | 0.0 | 1.0 |
| MDIIDMHH_55 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_56 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_57 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_58 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_59 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_60 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_61 | 1.0 | 0.0 | 1.0 |
| MDIIDMHH_62 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_63 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_64 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_65 | 1.0 | 0.0 | 1.0 |
| MDIIDMHH_66 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_67 | 1.0 | 0.0 | 1.0 |
| MDIIDMHH_68 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_69 | 1.0 | 0.0 | 1.0 |
| MDIIDMHH_71 | 0.0 | 1.0 | 0.0 |
| MDIIDMHH_72 | 1.0 | 0.0 | 1.0 |
| MDIIDMHH_73 | 1.0 | 0.0 | 1.0 |
| MDIIDMHH_75 | 1.0 | 0.0 | 1.0 |
| MDIIDMHH_76 | 1.0 | 0.0 | 1.0 |
| MDIIDMHH_77 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MDIIDMHH_1 | 49350 | 58704 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632 |
| MDIIDMHH_4 | 46683 | 79840 | False | Siphoviridae | VOG4918, VOG0054, VOG7888, VOG4705, VOG4599, VOG4605, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG5601, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG4549, VOG10904, VOG4570, VOG0198, VOG6815, VOG0152, VOG9759, VOG9741, VOG4693, VOG6623, VOG9860, VOG11003, VOG1638, VOG6238, VOG4566, VOG0186, VOG1309 |
| MDIIDMHH_44 | 3840 | 18508 | False | Siphoviridae | VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG4568, VOG4556, VOG0202, VOG1886, VOG4581, VOG0221 |
Phigaro v2.4.0 (Database: Jan. 2024 release)